Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.273 C 0.227 G 0.227 T 0.273


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6324_1.02 KLF4 chr1 - 10210181 10210190 8.1e-07 0.0579 GGGGCGGGGC
M6324_1.02 KLF4 chr8 - 18084373 18084382 8.1e-07 0.0579 GGGGCGGGGC
M6324_1.02 KLF4 chr8 + 22561942 22561951 8.1e-07 0.0579 GGGGCGGGGC
M6324_1.02 KLF4 chr16 + 30377715 30377724 8.1e-07 0.0579 ggggcggggc
M6324_1.02 KLF4 chr19 - 41353104 41353113 8.1e-07 0.0579 GGGGCGGGGC
M6324_1.02 KLF4 chr7 + 44606578 44606587 8.1e-07 0.0579 GGGGCGGGGC
M6324_1.02 KLF4 chr12 - 113335165 113335174 8.1e-07 0.0579 GGGGCGGGGC
M6324_1.02 KLF4 chr12 - 113335215 113335224 8.1e-07 0.0579 GGGGCGGGGC
M6324_1.02 KLF4 chr17 + 17497441 17497450 1.25e-06 0.0796 AGGGCGGGGC
M6324_1.02 KLF4 chr16 + 24508326 24508335 1.78e-06 0.0909 tgggtggggc
M6324_1.02 KLF4 chr3 - 9931142 9931151 2.22e-06 0.0909 GGGGTGGGGC
M6324_1.02 KLF4 chr12 - 14759936 14759945 2.22e-06 0.0909 GGGGTGGGGC
M6324_1.02 KLF4 chr5 - 74099878 74099887 2.22e-06 0.0909 GGGGTGGGGC
M6324_1.02 KLF4 chr5 - 168768416 168768425 2.22e-06 0.0909 GGGGTGGGGC
M6324_1.02 KLF4 chr12 - 113335467 113335476 2.75e-06 0.105 AGGGTGGGGC
M6324_1.02 KLF4 chr8 - 18084128 18084137 3.72e-06 0.122 GGGGCGTGGC
M6324_1.02 KLF4 chr17 + 21275902 21275911 3.72e-06 0.122 GGGGCGTGGC
M6324_1.02 KLF4 chr17 + 21275915 21275924 4.25e-06 0.122 AGGGCGTGGC
M6324_1.02 KLF4 chr7 - 69019869 69019878 4.25e-06 0.122 AGGGCGTGGC
M6324_1.02 KLF4 chr12 - 113335182 113335191 4.25e-06 0.122 AGGGCGTGGC
M6324_1.02 KLF4 chr18 + 48622281 48622290 5.42e-06 0.141 ggggtgtggc
M6324_1.02 KLF4 chr11 + 70897598 70897607 5.42e-06 0.141 ggggtgtggc
M6324_1.02 KLF4 chrX - 48853822 48853831 6.06e-06 0.144 AGGGTGTGGC
M6324_1.02 KLF4 chr12 - 49779310 49779319 6.06e-06 0.144 AGGGTGTGGC
M6324_1.02 KLF4 chr1 + 36096273 36096282 6.59e-06 0.151 TGGGAGGGGC
M6324_1.02 KLF4 chr10 + 75295398 75295407 7.56e-06 0.166 AGGGAGGGGC
M6324_1.02 KLF4 chr19 + 36850354 36850363 8.09e-06 0.171 TGGGCGGGgt
M6324_1.02 KLF4 chr13 + 50536650 50536659 9.69e-06 0.198 TGGGTGGGGT
M6324_1.02 KLF4 chr21 - 44611696 44611705 1.02e-05 0.2 GGGGTGGGGT
M6324_1.02 KLF4 chr16 + 27830064 27830073 1.09e-05 0.2 AGGGTGGGGT
M6324_1.02 KLF4 chr6 + 158086341 158086350 1.15e-05 0.2 TGGGAGTGGC
M6324_1.02 KLF4 chr8 - 18084074 18084083 1.2e-05 0.2 GGGGAGTGGC
M6324_1.02 KLF4 chr3 - 179347705 179347714 1.2e-05 0.2 GGGGAGTGGC
M6324_1.02 KLF4 chr1 - 16122971 16122980 1.27e-05 0.2 AGGGAGTGGC
M6324_1.02 KLF4 chr9 - 137242869 137242878 1.33e-05 0.2 TGGGCGTGGT
M6324_1.02 KLF4 chr9 - 137346967 137346976 1.33e-05 0.2 TGGGCGTGGT
M6324_1.02 KLF4 chr3 - 9931137 9931146 1.53e-05 0.2 GGGGCGGGGG
M6324_1.02 KLF4 chr21 + 39313698 39313707 1.53e-05 0.2 GGGGCGGGGG
M6324_1.02 KLF4 chr20 - 52972214 52972223 1.53e-05 0.2 GGGGCGGGGG
M6324_1.02 KLF4 chr3 + 179347352 179347361 1.53e-05 0.2 ggggcggggg
M6324_1.02 KLF4 chr6 - 19837228 19837237 1.57e-05 0.2 AGGGCGGGGG
M6324_1.02 KLF4 chr1 - 109484547 109484556 1.57e-05 0.2 AGGGCGGGGG
M6324_1.02 KLF4 chr11 + 8467800 8467809 1.65e-05 0.2 tgggtgtggt
M6324_1.02 KLF4 chr18 + 22055431 22055440 1.65e-05 0.2 tgggtgtggt
M6324_1.02 KLF4 chr13 + 29726643 29726652 1.65e-05 0.2 tgggtgtggt
M6324_1.02 KLF4 chr1 + 228782932 228782941 1.65e-05 0.2 tgggtgtggt
M6324_1.02 KLF4 chr6 + 139125143 139125152 1.71e-05 0.2 GGGGTGTGGT
M6324_1.02 KLF4 chr9 + 134896136 134896145 1.84e-05 0.2 TGGGTGGGGG
M6324_1.02 KLF4 chr16 - 1398683 1398692 1.88e-05 0.2 GGGGTGGGGG
M6324_1.02 KLF4 chr19 + 18373807 18373816 1.88e-05 0.2 GGGGTGGGGG
M6324_1.02 KLF4 chr17 - 44307718 44307727 1.88e-05 0.2 GGGGTGGGGG
M6324_1.02 KLF4 chr20 + 46085494 46085503 1.88e-05 0.2 GGGGTGGGGG
M6324_1.02 KLF4 chr11 - 76630529 76630538 1.88e-05 0.2 GGGGTGGGGG
M6324_1.02 KLF4 chr5 - 149731335 149731344 1.88e-05 0.2 GGGGTGGGGG
M6324_1.02 KLF4 chr11 - 45279962 45279971 1.94e-05 0.202 AGGGTGGGGG
M6324_1.02 KLF4 chr19 + 38100023 38100032 1.97e-05 0.202 CGGGCGGGGC
M6324_1.02 KLF4 chr17 - 47071334 47071343 2.07e-05 0.208 GGGGCGTGGG
M6324_1.02 KLF4 chr19 + 18374033 18374042 2.12e-05 0.21 AGGGCGTGGG
M6324_1.02 KLF4 chr17 + 50056801 50056810 2.23e-05 0.214 TGGGTGTGGG
M6324_1.02 KLF4 chr22 - 36372107 36372116 2.29e-05 0.214 GGGGTGTGGG
M6324_1.02 KLF4 chr17 + 50056659 50056668 2.35e-05 0.214 AGGGTGTGGG
M6324_1.02 KLF4 chr3 - 190585959 190585968 2.35e-05 0.214 AGGGTGTGGG
M6324_1.02 KLF4 chr5 + 149731712 149731721 2.4e-05 0.214 TGGGCGGGGA
M6324_1.02 KLF4 chr6 - 19837202 19837211 2.45e-05 0.214 GGGGCGGGGA
M6324_1.02 KLF4 chr14 + 22919405 22919414 2.5e-05 0.214 AGGGCGGGGA
M6324_1.02 KLF4 chr10 - 103259010 103259019 2.61e-05 0.214 TGGGTGGGGA
M6324_1.02 KLF4 chr5 - 149731356 149731365 2.61e-05 0.214 TGGGTGGGGA
M6324_1.02 KLF4 chr12 + 12649353 12649362 2.66e-05 0.214 ggggtgggga
M6324_1.02 KLF4 chr9 + 18535677 18535686 2.66e-05 0.214 ggggtgggga
M6324_1.02 KLF4 chr7 - 75628324 75628333 2.66e-05 0.214 GGGGTGGGGA
M6324_1.02 KLF4 chr3 - 129840699 129840708 2.66e-05 0.214 GGGGTGGGGA
M6324_1.02 KLF4 chr21 + 44611600 44611609 2.72e-05 0.214 AGGGTGGGGA
M6324_1.02 KLF4 chr6 + 154613764 154613773 2.72e-05 0.214 AGGGTGGGGA
M6324_1.02 KLF4 chr19 + 36466304 36466313 2.79e-05 0.216 TGGGAGGGGT
M6324_1.02 KLF4 chr19 + 18373981 18373990 2.9e-05 0.222 AGGGAGGGGT
M6324_1.02 KLF4 chr19 - 38535299 38535308 3.11e-05 0.231 AGGGCGAGGC
M6324_1.02 KLF4 chr20 - 52972391 52972400 3.11e-05 0.231 AGGGCGAGGC
M6324_1.02 KLF4 chr19 - 35154911 35154920 3.27e-05 0.24 TGGGCGTGGA
M6324_1.02 KLF4 chr8 + 22561965 22561974 3.52e-05 0.251 GGGGCGCGGC
M6324_1.02 KLF4 chr7 - 44606744 44606753 3.56e-05 0.251 AGGGCGCGGC
M6324_1.02 KLF4 chr18 - 50194190 50194199 3.56e-05 0.251 AGGGCGCGGC
M6324_1.02 KLF4 chr14 + 22919489 22919498 3.61e-05 0.251 TGGGCGGAGC
M6324_1.02 KLF4 chr19 + 18373990 18373999 3.93e-05 0.251 TGGGTGAGGC
M6324_1.02 KLF4 chr20 + 20946478 20946487 3.93e-05 0.251 TGGGTGAGGC
M6324_1.02 KLF4 chr12 + 27547802 27547811 3.93e-05 0.251 tgggtgaggc
M6324_1.02 KLF4 chr11 - 1396452 1396461 4.04e-05 0.251 AGGGTGAGGC
M6324_1.02 KLF4 chr19 + 31313592 31313601 4.04e-05 0.251 AGGGTGAGGC
M6324_1.02 KLF4 chr3 - 72982848 72982857 4.04e-05 0.251 AGGGTGAGGC
M6324_1.02 KLF4 chr8 + 18084384 18084393 4.11e-05 0.251 TAGGTGGGGC
M6324_1.02 KLF4 chr22 - 30391229 30391238 4.11e-05 0.251 TAGGTGGGGC
M6324_1.02 KLF4 chr14 + 70359341 70359350 4.36e-05 0.251 GGGGTGTGGA
M6324_1.02 KLF4 chr8 + 80945259 80945268 4.36e-05 0.251 ggggtgtgga
M6324_1.02 KLF4 chr14 - 65396266 65396275 4.54e-05 0.251 GGGGTGCGGC
M6324_1.02 KLF4 chr1 - 36096214 36096223 4.66e-05 0.251 TGGGAGTGGT
M6324_1.02 KLF4 chr12 + 31749344 31749353 4.73e-05 0.251 ggggagtggt
M6324_1.02 KLF4 chr14 + 22919272 22919281 4.87e-05 0.251 TGGGTGGAGC
M6324_1.02 KLF4 chr7 - 1855768 1855777 4.98e-05 0.251 GGGGTGGAGC
M6324_1.02 KLF4 chr6 + 158086160 158086169 4.98e-05 0.251 GGGGTGGAGC
M6324_1.02 KLF4 chr3 + 16884248 16884257 5.08e-05 0.251 GGGGTGGGTC
M6324_1.02 KLF4 chr1 - 26823096 26823105 5.15e-05 0.251 AGGGTGGAGC
M6324_1.02 KLF4 chrX + 54808031 54808040 5.3e-05 0.251 TGGGAGGGGG
M6324_1.02 KLF4 chrX + 94173536 94173545 5.3e-05 0.251 tgggaggggg
M6324_1.02 KLF4 chr12 - 113335150 113335159 5.3e-05 0.251 GGGGCGGGCC
M6324_1.02 KLF4 chr8 - 18084333 18084342 5.39e-05 0.251 GGGGAGGGGG
M6324_1.02 KLF4 chr21 - 37547485 37547494 5.39e-05 0.251 GGGGAGGGGG
M6324_1.02 KLF4 chr18 - 50194040 50194049 5.39e-05 0.251 GGGGAGGGGG
M6324_1.02 KLF4 chr5 + 168748726 168748735 5.39e-05 0.251 GGGGAGGGGG
M6324_1.02 KLF4 chr6 - 29804385 29804394 5.44e-05 0.251 AGGGAGGGGG
M6324_1.02 KLF4 chr17 - 39658388 39658397 5.44e-05 0.251 AGGGAGGGGG
M6324_1.02 KLF4 chr5 + 149731599 149731608 5.44e-05 0.251 agggaggggg
M6324_1.02 KLF4 chr6 - 134063882 134063891 5.52e-05 0.251 GGGGGGGGGC
M6324_1.02 KLF4 chr3 + 179347359 179347368 5.52e-05 0.251 gggggggggc
M6324_1.02 KLF4 chr19 - 38099994 38100003 5.81e-05 0.251 TGGGCGTAGC
M6324_1.02 KLF4 chr21 - 37547479 37547488 5.98e-05 0.251 GGGGCGTGTC
M6324_1.02 KLF4 chr12 - 113335195 113335204 5.98e-05 0.251 GGGGCGTGTC
M6324_1.02 KLF4 chr1 + 7624982 7624991 6.21e-05 0.251 tgggcagggc
M6324_1.02 KLF4 chr17 - 14169413 14169422 6.21e-05 0.251 TGGGCAGGGC
M6324_1.02 KLF4 chr1 - 120001410 120001419 6.21e-05 0.251 TGGGCAGGGC
M6324_1.02 KLF4 chr1 - 175840443 175840452 6.21e-05 0.251 TGGGCAGGGC
M6324_1.02 KLF4 chr17 + 44307875 44307884 6.3e-05 0.251 GGGGTGGGCC
M6324_1.02 KLF4 chr7 - 65750767 65750776 6.41e-05 0.251 AGGGTGGGCC
M6324_1.02 KLF4 chr1 + 155244575 155244584 6.46e-05 0.251 TGGGCGGGAC
M6324_1.02 KLF4 chr6 - 19837315 19837324 6.5e-05 0.251 GGGGCGGGAC
M6324_1.02 KLF4 chr1 + 155244673 155244682 6.5e-05 0.251 GGGGCGGGAC
M6324_1.02 KLF4 chr12 - 48721014 48721023 6.97e-05 0.251 TGGGTGTGTC
M6324_1.02 KLF4 chr18 + 50173937 50173946 6.97e-05 0.251 tgggtgtgtc
M6324_1.02 KLF4 chr6 + 14062538 14062547 7.45e-05 0.251 tgggagtggg
M6324_1.02 KLF4 chr12 + 14760062 14760071 7.45e-05 0.251 tgggagtggg
M6324_1.02 KLF4 chr16 - 15982234 15982243 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chr19 + 18304415 18304424 7.45e-05 0.251 tgggagtggg
M6324_1.02 KLF4 chr14 + 29879575 29879584 7.45e-05 0.251 tgggagtggg
M6324_1.02 KLF4 chr19 - 34511088 34511097 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chr18 - 50174159 50174168 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chr10 - 55264062 55264071 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chr3 - 72983038 72983047 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chr5 - 74099928 74099937 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chrX + 81728798 81728807 7.45e-05 0.251 tgggagtggg
M6324_1.02 KLF4 chr6 + 109356657 109356666 7.45e-05 0.251 tgggagtggg
M6324_1.02 KLF4 chr5 - 130452969 130452978 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chr5 + 133051450 133051459 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chr6 + 134063953 134063962 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chrX + 140172003 140172012 7.45e-05 0.251 tgggagtggg
M6324_1.02 KLF4 chr5 + 179399515 179399524 7.45e-05 0.251 tgggagtggg
M6324_1.02 KLF4 chr1 - 222064578 222064587 7.45e-05 0.251 TGGGAGTGGG
M6324_1.02 KLF4 chr7 - 1855794 1855803 7.56e-05 0.251 GGGGAGTGGG
M6324_1.02 KLF4 chr1 - 10210389 10210398 7.56e-05 0.251 GGGGAGTGGG
M6324_1.02 KLF4 chr13 + 50536877 50536886 7.56e-05 0.251 ggggagtggg
M6324_1.02 KLF4 chr19 - 602121 602130 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr19 - 602182 602191 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr19 - 602215 602224 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr19 - 602248 602257 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr19 - 602281 602290 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr19 - 602314 602323 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr19 - 602375 602384 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr17 + 2875395 2875404 7.69e-05 0.251 agggagtggg
M6324_1.02 KLF4 chr14 - 22333147 22333156 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr22 - 36372095 36372104 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr13 - 95362895 95362904 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr8 + 144316941 144316950 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr6 + 158086180 158086189 7.69e-05 0.251 AGGGAGTGGG
M6324_1.02 KLF4 chr4 + 173842879 173842888 7.69e-05 0.251 agggagtggg
M6324_1.02 KLF4 chr19 + 18304328 18304337 7.86e-05 0.251 TGGGGGTGGC
M6324_1.02 KLF4 chr18 + 22055758 22055767 7.86e-05 0.251 tgggggtggc
M6324_1.02 KLF4 chr2 - 84458855 84458864 7.86e-05 0.251 TGGGGGTGGC
M6324_1.02 KLF4 chr19 - 35155003 35155012 7.9e-05 0.251 GGGGGGTGGC
M6324_1.02 KLF4 chr17 - 44307885 44307894 7.95e-05 0.251 AGGGGGTGGC
M6324_1.02 KLF4 chr7 + 65750933 65750942 8.07e-05 0.251 GGGGTGGGAC
M6324_1.02 KLF4 chr14 - 70359479 70359488 8.07e-05 0.251 GGGGTGGGAC
M6324_1.02 KLF4 chr8 - 105319211 105319220 8.34e-05 0.251 TGAGCGGGGC
M6324_1.02 KLF4 chr1 - 10210186 10210195 8.38e-05 0.251 GGAGCGGGGC
M6324_1.02 KLF4 chr3 + 16884243 16884252 8.43e-05 0.251 CGGGTGGGGT
M6324_1.02 KLF4 chr12 - 12267362 12267371 8.61e-05 0.251 AGAGCGGGGC
M6324_1.02 KLF4 chr1 - 228297648 228297657 8.85e-05 0.251 AGGGTGTGCC
M6324_1.02 KLF4 chr1 + 3992062 3992071 8.91e-05 0.251 TGGGAGGGGA
M6324_1.02 KLF4 chr1 + 3992078 3992087 8.96e-05 0.251 GGGGAGGGGA
M6324_1.02 KLF4 chr21 + 39313839 39313848 8.96e-05 0.251 GGGGAGGGGA
M6324_1.02 KLF4 chr1 - 109484122 109484131 8.96e-05 0.251 GGGGAGGGGA
M6324_1.02 KLF4 chr10 - 110048224 110048233 8.96e-05 0.251 GGGGAGGGGA
M6324_1.02 KLF4 chr17 + 13771053 13771062 9.09e-05 0.251 agggagggga
M6324_1.02 KLF4 chr22 - 19153609 19153618 9.09e-05 0.251 AGGGAGGGGA
M6324_1.02 KLF4 chrX + 54808056 54808065 9.09e-05 0.251 AGGGAGGGGA
M6324_1.02 KLF4 chr14 - 96368747 96368756 9.09e-05 0.251 AGGGAGGGGA
M6324_1.02 KLF4 chr14 - 102427639 102427648 9.09e-05 0.251 AGGGAGGGGA
M6324_1.02 KLF4 chr4 + 154308287 154308296 9.09e-05 0.251 agggagggga
M6324_1.02 KLF4 chr3 + 179347530 179347539 9.09e-05 0.251 AGGGAGGGGA
M6324_1.02 KLF4 chr16 + 30377991 30378000 9.25e-05 0.251 TGGGCGGCGC
M6324_1.02 KLF4 chr5 - 178130595 178130604 9.33e-05 0.251 AGGGCGGCGC
M6324_1.02 KLF4 chr8 + 18084220 18084229 9.48e-05 0.251 AGGACGGGGC
M6324_1.02 KLF4 chr1 - 82452434 82452443 9.55e-05 0.251 TGGGTGGTGC
M6324_1.02 KLF4 chr14 - 29566371 29566380 9.6e-05 0.251 GGGGTGGTGC
M6324_1.02 KLF4 chr17 + 44307862 44307871 9.6e-05 0.251 GGGGTGGTGC
M6324_1.02 KLF4 chr6 - 30907671 30907680 9.77e-05 0.251 CGGGCGTGGT
M6324_1.02 KLF4 chr10 - 55263886 55263895 9.77e-05 0.251 CGGGCGTGGT
M6324_1.02 KLF4 chr11 - 33434619 33434628 9.83e-05 0.251 TGAGTGGGGC
M6324_1.02 KLF4 chr19 - 602119 602128 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr19 - 602180 602189 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr19 - 602213 602222 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr19 - 602246 602255 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr19 - 602279 602288 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr19 - 602312 602321 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr19 - 602373 602382 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr16 + 1398503 1398512 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr1 - 10210387 10210396 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr12 - 13219537 13219546 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr8 + 22562252 22562261 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr1 - 27681781 27681790 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr14 - 31331594 31331603 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr1 + 36096129 36096138 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr8 - 38907114 38907123 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr7 + 44606796 44606805 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr11 + 77730963 77730972 9.89e-05 0.251 ggagtggggc
M6324_1.02 KLF4 chrX + 82161387 82161396 9.89e-05 0.251 ggagtggggc
M6324_1.02 KLF4 chrX - 84040781 84040790 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr16 + 90054070 90054079 9.89e-05 0.251 ggagtggggc
M6324_1.02 KLF4 chr1 - 101041505 101041514 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr14 + 102427753 102427762 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr7 - 106342144 106342153 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr4 - 110219123 110219132 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr1 - 118377357 118377366 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr5 + 119135894 119135903 9.89e-05 0.251 ggagtggggc
M6324_1.02 KLF4 chr8 + 122240488 122240497 9.89e-05 0.251 ggagtggggc
M6324_1.02 KLF4 chr7 + 131306280 131306289 9.89e-05 0.251 ggagtggggc
M6324_1.02 KLF4 chr7 + 151972021 151972030 9.89e-05 0.251 ggagtggggc
M6324_1.02 KLF4 chr6 - 158394433 158394442 9.89e-05 0.251 GGAGTGGGGC
M6324_1.02 KLF4 chr4 + 173842881 173842890 9.89e-05 0.251 ggagtggggc

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_9 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6324_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_9 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF707.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


Go to top