# WARNING: this file is not sorted!
# db	id                         alt	consensus	 E-value	adj_p-value	log_adj_p-value	bin_location	bin_width	total_width	sites_in_bin	total_sites	p_success	 p-value	mult_tests
   1	YCCCCCYYTSSTKCTC        MEME-1	YCCCCCYYTSSTKCTC	6.3e-044	   8.6e-047	        -106.07	         0.0	       77	        485	         235	        559	  0.15876	3.5e-049	       242
   1	ACACACACACACACACACACACACACACACA MEME-2	ACACACACACACACACACACACACACACACA	1.8e-003	   2.4e-006	         -12.95	         0.0	      128	        470	          49	         87	  0.27234	1.0e-008	       234
   1	TCTYYCTYYCTYYYYY        MEME-3	TCTYYCTYYCTYYYYY	8.7e-004	   1.2e-006	         -13.66	         0.0	       75	        485	         134	        532	  0.15464	4.8e-009	       242
   2	GGGGAATK               DREME-1	GGGGAATK	2.5e-026	   3.3e-029	         -65.57	         0.0	       95	        493	          73	         99	  0.19270	1.4e-031	       246
   2	GAGMAC                 DREME-2	GAGMAC	4.1e-010	   5.5e-013	         -28.22	         0.0	      125	        495	         139	        301	  0.25253	2.2e-015	       247
   2	ARGGGGGA               DREME-3	ARGGGGGA	1.7e-027	   2.3e-030	         -68.24	         0.0	       85	        493	          94	        156	  0.17241	9.4e-033	       246
   3	M0404_1.02 (ZNF202)_(Mus_musculus)_(DBD_0.87)	NNNKGGGGSV	5.4e-028	   7.4e-031	         -69.39	         0.0	       85	        491	         224	        586	  0.17312	3.0e-033	       245
   3	M0428_1.02 (ZNF691)_(Mus_musculus)_(DBD_0.97)	RKGAGYAC	1.9e-002	   2.5e-005	         -10.59	         0.0	      125	        493	         202	        575	  0.25355	1.0e-007	       246
   3	M2273_1.02                E2F6	RGGCGGGARRV	2.5e-003	   3.4e-006	         -12.59	         0.0	       88	        490	         153	        554	  0.17959	1.4e-008	       244
   3	M4537_1.02                E2F4	SGCGGGAARWTBVRR	1.2e-003	   1.6e-006	         -13.36	         0.0	       78	        486	         134	        514	  0.16049	6.5e-009	       242
   3	M4604_1.02              ZNF263	RRGGAGGASGVVGRGGRGGRG	2.6e-012	   3.5e-015	         -33.30	         0.0	      114	        480	         224	        560	  0.23750	1.4e-017	       239
   3	M5491_1.02               GLIS2	CDYYGCGGGGGGTC	4.3e-001	   5.8e-004	          -7.44	         0.0	       39	        487	          59	        392	  0.08008	2.4e-006	       243
   3	M5965_1.02                ZIC4	DCDCMGCRGGGGGYC	6.1e-004	   8.3e-007	         -14.00	         0.0	       66	        486	         116	        499	  0.13580	3.4e-009	       242
   3	M5977_1.02              ZNF740	GTGGGGGGGK	3.3e-006	   4.5e-009	         -19.22	         0.0	       77	        491	         148	        552	  0.15682	1.8e-011	       245
   3	M6191_1.02                E2F2	GGCGCGAAAC	1.1e-008	   1.4e-011	         -24.96	         0.0	       93	        491	         151	        445	  0.18941	5.9e-014	       245
   3	M6196_1.02                E2F7	WWDGGCGCGAAAM	3.7e0000	   5.1e-003	          -5.28	         0.0	       74	        488	          69	        280	  0.15164	2.1e-005	       243
   3	M6199_1.02                EGR2	DGVGTGGGCGG	3.0e-002	   4.0e-005	         -10.13	         0.0	      360	        490	         442	        533	  0.73469	1.6e-007	       244
   3	M6200_1.02                EGR3	WGAGTGGGYGT	5.1e-004	   6.9e-007	         -14.18	         0.0	      160	        490	         241	        538	  0.32653	2.8e-009	       244
   3	M6212_1.02               EPAS1	CMCACGYAYDCAC	2.6e-002	   3.5e-005	         -10.27	         0.0	      122	        488	         184	        522	  0.25000	1.4e-007	       243
   3	M6267_1.02               GLIS3	GYGGGGGGTM	2.0e-001	   2.7e-004	          -8.24	         0.0	       83	        491	         140	        561	  0.16904	1.1e-006	       245
   3	M6306_1.02               INSM1	TGTMAGGGGGCR	6.4e-001	   8.7e-004	          -7.04	         0.0	       87	        489	         123	        469	  0.17791	3.6e-006	       244
   3	M6336_1.02                 MAZ	RGGGDRGGGAGGGRGGG	5.6e0000	   7.6e-003	          -4.88	         0.0	       84	        484	         136	        563	  0.17355	3.2e-005	       241
   3	M6356_1.02                MZF1	RGDGGGGAD	8.4e-030	   1.1e-032	         -73.56	         0.0	       86	        492	         229	        587	  0.17480	4.6e-035	       245
   3	M6381_1.02               NR0B1	YSTCCCMCKC	8.5e0000	   1.1e-002	          -4.47	         0.0	      375	        491	         470	        565	  0.76375	4.7e-005	       245
   3	M6420_1.02               PLAG1	GGRGGSMHNWVKAGGGG	2.0e-012	   2.8e-015	         -33.53	         0.0	       82	        484	         178	        561	  0.16942	1.1e-017	       241
   3	M6442_1.02                PURA	CCMBGCCCNCCMMYWCC	3.6e-001	   4.9e-004	          -7.62	         0.0	      148	        484	         233	        587	  0.30579	2.0e-006	       241
   3	M6456_1.02               RREB1	DKGKKKGKGGKTGKTTKGGGKT	5.8e-001	   7.8e-004	          -7.15	         0.0	      101	        479	         143	        476	  0.21086	3.3e-006	       239
   3	M6476_1.02                SOX4	GAGAACAAAGSG	2.5e0000	   3.4e-003	          -5.67	         0.0	       79	        489	         124	        531	  0.16155	1.4e-005	       244
   3	M6515_1.02               TFDP1	AWWKRGCGGGAAAY	5.0e0000	   6.8e-003	          -4.99	         0.0	       89	        487	         114	        433	  0.18275	2.8e-005	       243
   3	M6535_1.02                 WT1	GMGGGGGCGKGGG	9.3e0000	   1.3e-002	          -4.37	         0.0	       88	        488	         131	        526	  0.18033	5.2e-005	       243
   3	M6552_1.02              ZNF148	KGVGKGGGGGAGGGG	9.9e0000	   1.3e-002	          -4.32	         0.0	       80	        486	         125	        542	  0.16461	5.5e-005	       242
   3	M6553_1.02              ZNF219	GDGGGGGGYGGA	8.6e-003	   1.2e-005	         -11.36	         0.0	       83	        489	         143	        549	  0.16973	4.8e-008	       244
   3	M6558_1.02              ZNF423	GCACCCTWGGGTGYC	3.3e-003	   4.5e-006	         -12.32	         0.0	       50	        486	          34	        119	  0.10288	1.8e-008	       242
##
# Detailed descriptions of columns in this file:
#
# db:	The name of the database (file name) that contains the motif.
# id:	A name for the motif that is unique in the motif database file.
# alt:	An alternate name of the motif that may be provided
#	in the motif database file.
# consensus:	A consensus sequence computed from the motif.
# E-value:	The expected number motifs that would have least one.
#	region as enriched for best matches to the motif as the reported region.
#	The E-value is the p-value multiplied by the number of motifs in the
#	input database(s).
# adj_p-value:	The probability that any tested region would be as enriched for
#	best matches to this motif as the reported region is.
#	By default the p-value is calculated by using the one-tailed binomial
#	test on the number of sequences with a match to the motif 
#	that have their best match in the reported region, corrected for
#	the number of regions and score thresholds tested.
#	The test assumes that the probability that the best match in a sequence
#	falls in the region is the region width divided by the
#	number of places a motif
#	can align in the sequence (sequence length minus motif width plus 1).
#	When CentriMo is run in discriminative mode with a negative
#	set of sequences, the p-value of a region is calculated
#	using the Fisher exact test on the 
#	enrichment of best matches in the positive sequences relative
#	to the negative sequences, corrected
#	for the number of regions and score thresholds tested.
#	The test assumes that the probability that the best match (if any)
#	falls into a given region
#	is the same for all positive and negative sequences.
# log_adj_p-value:	Log of adjusted p-value.
# bin_location:	Location of the center of the most enriched region.
# bin_width:	The width (in sequence positions) of the most enriched region.
#	A best match to the motif is counted as being in the region if the
#	center of the motif falls in the region.
# total_width:	The window maximal size which can be reached for this motif:
#		rounded(sequence length - motif length +1)/2
# sites_in_bin:	The number of (positive) sequences whose best match to the motif
#	falls in the reported region.
#	Note: This number may be less than the number of
#	(positive) sequences that have a best match in the region.
#	The reason for this is that a sequence may have many matches that score
#	equally best.
#	If n matches have the best score in a sequence, 1/n is added to the
#	appropriate bin for each match.
# total_sites:	The number of sequences containing a match to the motif
#	above the score threshold.
# p_success:	The probability of falling in the enriched window:
#		bin width / total width
# p-value:	The uncorrected p-value before it gets adjusted to the
#	number of multiple tests to give the adjusted p-value.
# mult_tests:	This is the number of multiple tests (n) done for this motif.
#	It was used to correct the original p-value of a region for
#	multiple tests using the formula:
#		p' = 1 - (1-p)^n where p is the uncorrected p-value.
#	The number of multiple tests is the number of regions
#	considered times the number of score thresholds considered.
#	It depends on the motif length, sequence length, and the type of
#	optimizations being done (central enrichment, local enrichment,
#	score optimization).