Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.252 C 0.248 G 0.248 T 0.252


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6322_1.02 KLF1 chr19 + 54449429 54449439 2.29e-07 0.131 CAGGGTGTGGC
M6322_1.02 KLF1 chr3 + 52722375 52722385 1.37e-06 0.16 ctgggtggggc
M6322_1.02 KLF1 chr15 - 67869698 67869708 1.37e-06 0.16 CTGGGTGGGGC
M6322_1.02 KLF1 chr1 + 84583384 84583394 2.05e-06 0.16 tagggtggggc
M6322_1.02 KLF1 chr2 - 105934150 105934160 2.05e-06 0.16 TAGGGTGGGGC
M6322_1.02 KLF1 chr8 - 142672902 142672912 2.05e-06 0.16 TAGGGTGGGGC
M6322_1.02 KLF1 chr15 - 99733940 99733950 2.5e-06 0.16 CGGGGTGGGGC
M6322_1.02 KLF1 chr9 + 133563231 133563241 3.42e-06 0.16 CAGGGTGCGGC
M6322_1.02 KLF1 chr9 + 133563537 133563547 3.65e-06 0.16 CAGGGTGAGGC
M6322_1.02 KLF1 chr16 + 89149698 89149708 4.33e-06 0.16 ttgggtgtggc
M6322_1.02 KLF1 chr1 - 42513392 42513402 4.79e-06 0.16 CAGGGTGGGGT
M6322_1.02 KLF1 chr2 - 69207730 69207740 4.79e-06 0.16 CAGGGTGGGGT
M6322_1.02 KLF1 chr1 + 81440012 81440022 5.02e-06 0.16 cagggtgggga
M6322_1.02 KLF1 chr6 - 112399460 112399470 5.24e-06 0.16 GTGGGTGGGGC
M6322_1.02 KLF1 chr17 + 21105247 21105257 5.69e-06 0.16 ttgggtggggc
M6322_1.02 KLF1 chr2 - 171627309 171627319 6.15e-06 0.16 CACGGTGTGGC
M6322_1.02 KLF1 chr1 - 53402818 53402828 6.38e-06 0.16 CAAGGTGTGGC
M6322_1.02 KLF1 chr2 - 24566112 24566122 6.84e-06 0.16 CTGGGTGTGGG
M6322_1.02 KLF1 chr15 - 70089374 70089384 6.84e-06 0.16 CTGGGTGTGGG
M6322_1.02 KLF1 chr6 - 112399643 112399653 6.84e-06 0.16 CTGGGTGTGGG
M6322_1.02 KLF1 chr8 + 134847815 134847825 6.84e-06 0.16 ctgggtgtggg
M6322_1.02 KLF1 chrX - 984030 984040 7.31e-06 0.16 CTGGGTGTGGT
M6322_1.02 KLF1 chr21 - 29461082 29461092 7.31e-06 0.16 CTGGGTGTGGT
M6322_1.02 KLF1 chr19 - 38862274 38862284 7.31e-06 0.16 CTGGGTGTGGT
M6322_1.02 KLF1 chr15 + 66793792 66793802 7.31e-06 0.16 ctgggtgtggt
M6322_1.02 KLF1 chr1 - 151351553 151351563 7.31e-06 0.16 CTGGGTGTGGT
M6322_1.02 KLF1 chr11 - 27305679 27305689 7.76e-06 0.16 GGGGGTGGGGC
M6322_1.02 KLF1 chr10 - 44747974 44747984 8.68e-06 0.16 CTGGGTGCGGC
M6322_1.02 KLF1 chr1 + 29860848 29860858 8.9e-06 0.16 TGGGGTGGGGC
M6322_1.02 KLF1 chr18 + 51014454 51014464 8.9e-06 0.16 tggggtggggc
M6322_1.02 KLF1 chr15 + 66793954 66793964 8.9e-06 0.16 tggggtggggc
M6322_1.02 KLF1 chr13 - 100403864 100403874 8.9e-06 0.16 TGGGGTGGGGC
M6322_1.02 KLF1 chr1 + 155094027 155094037 9.36e-06 0.163 TAGGGTGTGGG
M6322_1.02 KLF1 chr3 + 4431744 4431754 1.07e-05 0.182 caaggtggggc
M6322_1.02 KLF1 chr2 + 237930805 237930815 1.14e-05 0.186 ATGGGTGGGGC
M6322_1.02 KLF1 chr16 + 79808800 79808810 1.17e-05 0.186 TAGGGTGAGGC
M6322_1.02 KLF1 chr17 - 75347502 75347512 1.21e-05 0.188 CTGGGTGGGGG
M6322_1.02 KLF1 chrX + 40809867 40809877 1.28e-05 0.189 cagggtggagc
M6322_1.02 KLF1 chr11 + 47651586 47651596 1.28e-05 0.189 cagggtggagc
M6322_1.02 KLF1 chr19 - 54449042 54449052 1.35e-05 0.191 CTGGGTGGGGA
M6322_1.02 KLF1 chr16 - 11601114 11601124 1.37e-05 0.191 GAGGGTGGGGG
M6322_1.02 KLF1 chr17 + 20951793 20951803 1.46e-05 0.191 TAGGGTGGGGG
M6322_1.02 KLF1 chr1 + 221714536 221714546 1.51e-05 0.191 tagggtggggt
M6322_1.02 KLF1 chr16 - 11600836 11600846 1.53e-05 0.191 GAGGGTGGGGA
M6322_1.02 KLF1 chr13 - 20756982 20756992 1.53e-05 0.191 GAGGGTGGGGA
M6322_1.02 KLF1 chr12 + 32248636 32248646 1.53e-05 0.191 GAGGGTGGGGA
M6322_1.02 KLF1 chr7 - 97130588 97130598 1.58e-05 0.193 AGGGGTGGGGC
M6322_1.02 KLF1 chr15 + 74882844 74882854 1.69e-05 0.201 ctcggtgtggc
M6322_1.02 KLF1 chr17 + 49017032 49017042 1.76e-05 0.201 CGGGGTGGGGA
M6322_1.02 KLF1 chr2 + 112947691 112947701 1.92e-05 0.201 cagggtgaggg
M6322_1.02 KLF1 chr1 + 29861030 29861040 1.94e-05 0.201 ctgggtgtgcc
M6322_1.02 KLF1 chrX - 120222946 120222956 2.1e-05 0.201 GTGGGTGTGGG
M6322_1.02 KLF1 chr6 - 160117824 160117834 2.17e-05 0.201 GAGGGTGTAGC
M6322_1.02 KLF1 chr6 + 54667876 54667886 2.22e-05 0.201 ttgggtgtggg
M6322_1.02 KLF1 chr17 + 10083381 10083391 2.29e-05 0.201 ttgggtgtggt
M6322_1.02 KLF1 chr18 - 32842852 32842862 2.29e-05 0.201 TTGGGTGTGGT
M6322_1.02 KLF1 chr8 - 144173855 144173865 2.29e-05 0.201 TTGGGTGTGGT
M6322_1.02 KLF1 chr1 + 167583643 167583653 2.29e-05 0.201 ttgggtgtggt
M6322_1.02 KLF1 chr4 - 80321767 80321777 2.31e-05 0.201 GTGGGTGTGGA
M6322_1.02 KLF1 chr6 - 89073498 89073508 2.34e-05 0.201 TAGGGTGTAGC
M6322_1.02 KLF1 chr6 - 9553109 9553119 2.4e-05 0.201 GTGGGTGAGGC
M6322_1.02 KLF1 chr11 + 11160935 11160945 2.43e-05 0.201 ctaggtggggc
M6322_1.02 KLF1 chr18 + 57889004 57889014 2.47e-05 0.201 AAGGGTGGGGA
M6322_1.02 KLF1 chr1 + 173864058 173864068 2.57e-05 0.201 ttgggtgaggc
M6322_1.02 KLF1 chr13 + 103573623 103573633 2.63e-05 0.201 ctgggtgggcc
M6322_1.02 KLF1 chr18 - 8837130 8837140 2.84e-05 0.201 GTGGGTGGGGT
M6322_1.02 KLF1 chr1 + 82791024 82791034 2.84e-05 0.201 gtgggtggggt
M6322_1.02 KLF1 chr6 + 147069651 147069661 2.84e-05 0.201 gtgggtggggt
M6322_1.02 KLF1 chr6 - 132252163 132252173 2.88e-05 0.201 GGGGGTGTGGG
M6322_1.02 KLF1 chr19 + 10843040 10843050 2.91e-05 0.201 gggggtgtggt
M6322_1.02 KLF1 chr3 + 9619408 9619418 2.93e-05 0.201 ttgggtggggg
M6322_1.02 KLF1 chr6 + 54667768 54667778 2.93e-05 0.201 ttgggtggggg
M6322_1.02 KLF1 chr16 - 68575439 68575449 2.93e-05 0.201 TTGGGTGGGGG
M6322_1.02 KLF1 chr2 + 74188262 74188272 2.93e-05 0.201 ttgggtggggg
M6322_1.02 KLF1 chr9 + 83128570 83128580 2.93e-05 0.201 ttgggtggggg
M6322_1.02 KLF1 chr6 - 26472636 26472646 2.98e-05 0.201 TTGGGTGGGGT
M6322_1.02 KLF1 chr22 + 47233442 47233452 2.98e-05 0.201 ttgggtggggt
M6322_1.02 KLF1 chr14 + 55468634 55468644 2.98e-05 0.201 tagggtgggcc
M6322_1.02 KLF1 chr2 - 69207725 69207735 3.04e-05 0.201 TGGGGTGTGGG
M6322_1.02 KLF1 chr1 - 234491460 234491470 3.11e-05 0.201 TTGGGTGGGGA
M6322_1.02 KLF1 chr1 - 6404881 6404891 3.5e-05 0.201 CCGGGTGGGGC
M6322_1.02 KLF1 chr3 - 27614658 27614668 3.5e-05 0.201 CCGGGTGGGGC
M6322_1.02 KLF1 chr10 + 118704960 118704970 3.5e-05 0.201 ccgggtggggc
M6322_1.02 KLF1 chr17 + 16924987 16924997 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr2 - 17629869 17629879 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr12 - 31362838 31362848 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr20 - 34332312 34332322 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr17 - 40485987 40485997 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr8 - 52599470 52599480 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr14 - 65808690 65808700 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr11 - 87086535 87086545 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr10 + 118704755 118704765 3.85e-05 0.201 gggggtggggg
M6322_1.02 KLF1 chr5 - 171924767 171924777 3.85e-05 0.201 GGGGGTGGGGG
M6322_1.02 KLF1 chr17 - 67658493 67658503 3.89e-05 0.201 GGGGGTGGGGT
M6322_1.02 KLF1 chr11 + 76250926 76250936 4.03e-05 0.201 ctgggtgcggg
M6322_1.02 KLF1 chrX + 53024214 53024224 4.08e-05 0.201 tggggtggggg
M6322_1.02 KLF1 chr14 - 103201050 103201060 4.08e-05 0.201 TGGGGTGGGGG
M6322_1.02 KLF1 chr4 + 1286691 1286701 4.15e-05 0.201 ctgggtgcggt
M6322_1.02 KLF1 chr4 + 80321655 80321665 4.15e-05 0.201 CTGGGTGAGGG
M6322_1.02 KLF1 chr13 + 100403518 100403528 4.26e-05 0.201 gggggtgggga
M6322_1.02 KLF1 chr16 + 11600976 11600986 4.49e-05 0.201 cagggtgtcgc
M6322_1.02 KLF1 chr1 + 227946347 227946357 4.49e-05 0.201 CAGGGTGTGTC
M6322_1.02 KLF1 chr15 - 74803794 74803804 4.54e-05 0.201 TGGGGTGGGGA
M6322_1.02 KLF1 chr10 + 103878454 103878464 4.54e-05 0.201 TGGGGTGGGGA
M6322_1.02 KLF1 chr5 - 126680390 126680400 4.54e-05 0.201 TGGGGTGGGGA
M6322_1.02 KLF1 chr2 - 177834346 177834356 4.54e-05 0.201 TGGGGTGGGGA
M6322_1.02 KLF1 chr2 + 17629855 17629865 4.7e-05 0.201 cacggtggggt
M6322_1.02 KLF1 chr10 + 118704749 118704759 4.7e-05 0.201 caaggtggggg
M6322_1.02 KLF1 chr1 - 44726749 44726759 4.77e-05 0.201 CAAGGTGGGGT
M6322_1.02 KLF1 chr15 - 74803799 74803809 4.77e-05 0.201 CAAGGTGGGGT
M6322_1.02 KLF1 chr16 + 2880334 2880344 5.02e-05 0.201 atgggtggggt
M6322_1.02 KLF1 chr17 + 62774286 62774296 5.27e-05 0.201 caggatgtggc
M6322_1.02 KLF1 chr1 - 154608879 154608889 5.27e-05 0.201 CACGGTGGGGA
M6322_1.02 KLF1 chr2 - 170923601 170923611 5.27e-05 0.201 CAGAGTGTGGC
M6322_1.02 KLF1 chr5 + 34538093 34538103 5.34e-05 0.201 gagggtgagga
M6322_1.02 KLF1 chr17 - 60328507 60328517 5.34e-05 0.201 GAGGGTGAGGA
M6322_1.02 KLF1 chr10 - 118704831 118704841 5.34e-05 0.201 GAGGGTGAGGA
M6322_1.02 KLF1 chrX - 53024283 53024293 5.39e-05 0.201 CAAGGTGGGGA
M6322_1.02 KLF1 chr1 - 112395973 112395983 5.48e-05 0.201 CAGGGTGGGCT
M6322_1.02 KLF1 chr6 + 25958961 25958971 5.55e-05 0.201 cagggtggagt
M6322_1.02 KLF1 chr9 + 86125971 86125981 5.55e-05 0.201 atgggtgggga
M6322_1.02 KLF1 chr2 + 238415917 238415927 5.55e-05 0.201 atgggtgggga
M6322_1.02 KLF1 chr17 - 49017007 49017017 5.71e-05 0.201 CAGGGTGGAGA
M6322_1.02 KLF1 chr6 - 132344884 132344894 5.71e-05 0.201 CAGGGTGGAGA
M6322_1.02 KLF1 chr4 + 52886559 52886569 5.76e-05 0.201 gtaggtggggc
M6322_1.02 KLF1 chr10 - 33104058 33104068 6.03e-05 0.201 CAGGGTGGCGC
M6322_1.02 KLF1 chr5 - 141681599 141681609 6.03e-05 0.201 CAGGGTGGGAC
M6322_1.02 KLF1 chr4 + 144622415 144622425 6.03e-05 0.201 cagggtggcgc
M6322_1.02 KLF1 chr1 - 2636816 2636826 6.1e-05 0.201 GTGGGTGGGCC
M6322_1.02 KLF1 chr10 - 56317264 56317274 6.1e-05 0.201 GTGGGTGGGCC
M6322_1.02 KLF1 chr9 + 83128813 83128823 6.1e-05 0.201 gtgggtgggcc
M6322_1.02 KLF1 chr3 - 101625017 101625027 6.1e-05 0.201 GTGGGTGGGCC
M6322_1.02 KLF1 chr7 + 106051412 106051422 6.1e-05 0.201 TGAGGTGTGGC
M6322_1.02 KLF1 chr12 - 12107760 12107770 6.3e-05 0.201 CAGGGAGGGGC
M6322_1.02 KLF1 chr1 - 29861038 29861048 6.53e-05 0.201 CAGGCTGGGGC
M6322_1.02 KLF1 chr5 - 33489072 33489082 6.53e-05 0.201 CAGAGTGGGGC
M6322_1.02 KLF1 chr19 + 38980904 38980914 6.53e-05 0.201 cagagtggggc
M6322_1.02 KLF1 chr22 + 40748775 40748785 6.53e-05 0.201 cagagtggggc
M6322_1.02 KLF1 chr15 + 41906631 41906641 6.53e-05 0.201 cagagtggggc
M6322_1.02 KLF1 chr4 - 56211446 56211456 6.53e-05 0.201 CAGGCTGGGGC
M6322_1.02 KLF1 chr6 + 132252316 132252326 6.53e-05 0.201 caggctggggc
M6322_1.02 KLF1 chr6 + 132345056 132345066 6.53e-05 0.201 cagagtggggc
M6322_1.02 KLF1 chr2 + 196354146 196354156 6.53e-05 0.201 cagagtggggc
M6322_1.02 KLF1 chr2 + 237930734 237930744 6.53e-05 0.201 caggctggggc
M6322_1.02 KLF1 chr12 - 8953255 8953265 6.57e-05 0.201 AGGGGTGGGGG
M6322_1.02 KLF1 chr6 - 20790779 20790789 6.57e-05 0.201 AGGGGTGGGGG
M6322_1.02 KLF1 chr1 - 234491261 234491271 6.64e-05 0.201 AGGGGTGGGGT
M6322_1.02 KLF1 chr17 + 51366258 51366268 6.71e-05 0.201 ataggtgtggc
M6322_1.02 KLF1 chr15 - 74803687 74803697 6.74e-05 0.201 AGGGGTGGGGA
M6322_1.02 KLF1 chr17 + 75347542 75347552 6.74e-05 0.201 aggggtgggga
M6322_1.02 KLF1 chr7 - 107360500 107360510 6.83e-05 0.201 CTAGGTGTGGG
M6322_1.02 KLF1 chr1 - 232131303 232131313 6.83e-05 0.201 CTAGGTGTGGG
M6322_1.02 KLF1 chr22 + 40748740 40748750 6.97e-05 0.201 ggcggtggggc
M6322_1.02 KLF1 chr1 + 29861133 29861143 7.01e-05 0.201 aagggtgaggg
M6322_1.02 KLF1 chr15 + 74882744 74882754 7.01e-05 0.201 aagggtgaggg
M6322_1.02 KLF1 chr12 - 31585142 31585152 7.06e-05 0.201 GGAGGTGGGGC
M6322_1.02 KLF1 chr1 - 113423352 113423362 7.06e-05 0.201 GGAGGTGGGGC
M6322_1.02 KLF1 chr2 - 171627292 171627302 7.06e-05 0.201 GGAGGTGGGGC
M6322_1.02 KLF1 chr6 - 16031826 16031836 7.11e-05 0.201 AAGGGTGAGGT
M6322_1.02 KLF1 chr2 + 30498098 30498108 7.11e-05 0.201 aagggtgaggt
M6322_1.02 KLF1 chr5 + 34547505 34547515 7.11e-05 0.201 aagggtgaggt
M6322_1.02 KLF1 chr22 + 35681661 35681671 7.11e-05 0.201 aagggtgaggt
M6322_1.02 KLF1 chr10 - 89020495 89020505 7.11e-05 0.201 AAGGGTGAGGT
M6322_1.02 KLF1 chrX + 140560690 140560700 7.11e-05 0.201 aagggtgaggt
M6322_1.02 KLF1 chr6 + 154122999 154123009 7.11e-05 0.201 aagggtgaggt
M6322_1.02 KLF1 chr18 - 49312617 49312627 7.45e-05 0.201 AAGGGTGCGGA
M6322_1.02 KLF1 chr19 + 47892704 47892714 7.52e-05 0.201 ctgggtgtagt
M6322_1.02 KLF1 chr4 + 1286458 1286468 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr12 + 5139972 5139982 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr6 - 10682149 10682159 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr6 + 20790701 20790711 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr7 + 24425996 24426006 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr6 + 26472765 26472775 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr10 + 27491397 27491407 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr1 - 30601378 30601388 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr13 + 31270884 31270894 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr19 + 32758165 32758175 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr18 + 32842889 32842899 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr7 - 32948479 32948489 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr13 - 33136772 33136782 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr3 + 33467452 33467462 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr15 - 35435653 35435663 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr2 + 36730725 36730735 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr9 - 38385166 38385176 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr12 + 40651429 40651439 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr11 + 44823309 44823319 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chrX - 44976052 44976062 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr13 + 46440746 46440756 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr3 - 52722246 52722256 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr2 + 59015360 59015370 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr14 + 65808586 65808596 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr16 - 65864539 65864549 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr1 + 66389764 66389774 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr16 + 68575364 68575374 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr14 + 70872473 70872483 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr17 - 75347612 75347622 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr16 - 79808595 79808605 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr7 - 80622205 80622215 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr1 - 82790857 82790867 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr16 + 89149610 89149620 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr6 - 90433981 90433991 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr8 + 93940530 93940540 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr3 - 101219720 101219730 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr6 + 127932937 127932947 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr9 - 128155827 128155837 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr3 + 136811731 136811741 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr3 - 141657437 141657447 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr8 + 144173892 144173902 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr4 - 144622281 144622291 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr1 - 167583606 167583616 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr2 + 170917782 170917792 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr1 + 172912995 172913005 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr2 - 177834123 177834133 7.55e-05 0.201 AAGGGTGAGGA
M6322_1.02 KLF1 chr1 + 207613158 207613168 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr1 + 207714093 207714103 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr2 + 241639586 241639596 7.55e-05 0.201 aagggtgagga
M6322_1.02 KLF1 chr2 + 241639687 241639697 7.73e-05 0.203 cttggtgtggc
M6322_1.02 KLF1 chr6 + 130749838 130749848 8.15e-05 0.203 ctgggtgagcc
M6322_1.02 KLF1 chr2 - 238415858 238415868 8.15e-05 0.203 CTGGGTGAGCC
M6322_1.02 KLF1 chr12 - 5140137 5140147 8.19e-05 0.203 TGGGGTGGAGC
M6322_1.02 KLF1 chr12 + 13316879 13316889 8.19e-05 0.203 tggggtggagc
M6322_1.02 KLF1 chr13 - 31271044 31271054 8.19e-05 0.203 TGGGGTGGAGC
M6322_1.02 KLF1 chr12 - 32248880 32248890 8.19e-05 0.203 TGGGGTGGAGC
M6322_1.02 KLF1 chr22 - 35681821 35681831 8.19e-05 0.203 TGGGGTGGAGC
M6322_1.02 KLF1 chrX + 44975892 44975902 8.19e-05 0.203 tggggtggagc
M6322_1.02 KLF1 chr1 + 61873830 61873840 8.19e-05 0.203 tggggtggagc
M6322_1.02 KLF1 chr3 + 71861357 71861367 8.19e-05 0.203 tggggtggagc
M6322_1.02 KLF1 chr9 - 85744690 85744700 8.19e-05 0.203 TGGGGTGGAGC
M6322_1.02 KLF1 chr3 - 136811893 136811903 8.19e-05 0.203 TGGGGTGGAGC
M6322_1.02 KLF1 chr7 - 148672190 148672200 8.19e-05 0.203 TGGGGTGGAGC
M6322_1.02 KLF1 chr7 - 159310829 159310839 8.19e-05 0.203 TGGGGTGGAGC
M6322_1.02 KLF1 chr1 + 232131128 232131138 8.19e-05 0.203 tggggtggagc
M6322_1.02 KLF1 chr21 + 46108912 46108922 8.45e-05 0.209 gagggtgtgca
M6322_1.02 KLF1 chr7 + 82392608 82392618 8.84e-05 0.215 ctaggtggggg
M6322_1.02 KLF1 chr5 - 108967054 108967064 8.84e-05 0.215 CTAGGTGGGGG
M6322_1.02 KLF1 chr1 + 229239259 229239269 8.84e-05 0.215 ctaggtggggg
M6322_1.02 KLF1 chr13 - 29223599 29223609 8.91e-05 0.215 GAGGGTGAGCC
M6322_1.02 KLF1 chr10 - 62465708 62465718 8.91e-05 0.215 GAGGGTGAGCC
M6322_1.02 KLF1 chr2 + 74998363 74998373 9.35e-05 0.217 ttgggtgaggg
M6322_1.02 KLF1 chr1 + 6368082 6368092 9.48e-05 0.217 atgggtgggcc
M6322_1.02 KLF1 chr11 - 32704751 32704761 9.48e-05 0.217 ATGGGTGGGCC
M6322_1.02 KLF1 chr5 + 33041232 33041242 9.48e-05 0.217 atgggtgggcc
M6322_1.02 KLF1 chr1 + 43468684 43468694 9.48e-05 0.217 atgggtgggcc
M6322_1.02 KLF1 chr10 + 44667169 44667179 9.48e-05 0.217 atgggtgggcc
M6322_1.02 KLF1 chr1 - 53402753 53402763 9.48e-05 0.217 ATGGGTGGGCC
M6322_1.02 KLF1 chr2 + 54121309 54121319 9.48e-05 0.217 atgggtgggcc
M6322_1.02 KLF1 chr19 - 57403352 57403362 9.48e-05 0.217 ATGGGTGGGCC
M6322_1.02 KLF1 chr2 - 62072337 62072347 9.48e-05 0.217 ATGGGTGGGCC
M6322_1.02 KLF1 chr10 - 62465536 62465546 9.48e-05 0.217 ATGGGTGGGCC
M6322_1.02 KLF1 chr15 - 67869756 67869766 9.48e-05 0.217 ATGGGTGGGCC
M6322_1.02 KLF1 chrX + 120223365 120223375 9.48e-05 0.217 atgggtgggcc
M6322_1.02 KLF1 chr12 + 32248916 32248926 9.79e-05 0.22 tagggtgagcc
M6322_1.02 KLF1 chr10 + 35888077 35888087 9.79e-05 0.22 ctgcgtgtggc
M6322_1.02 KLF1 chr18 + 57889174 57889184 9.79e-05 0.22 ctgagtgtggc
M6322_1.02 KLF1 chr7 - 82392394 82392404 9.79e-05 0.22 CTGAGTGTGGC
M6322_1.02 KLF1 chr1 + 234491497 234491507 9.79e-05 0.22 CTGGGTTTGGC
M6322_1.02 KLF1 chr6 + 71367959 71367969 9.83e-05 0.22 atgggtggagc
M6322_1.02 KLF1 chr17 + 16924981 16924991 9.97e-05 0.222 GAAGGTGGGGG

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_56 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6322_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_56 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF680.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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