# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 ATTWAWTGAGMW MEME-1 ATTWAWTGAGMW 3.0e-233 4.0e-236 -542.03 0.0 67 489 426 572 0.13701 1.6e-238 244 1 CCTGGCACATAGTA MEME-2 CCTGGCACATAGTA 1.1e-070 1.5e-073 -167.68 0.0 75 487 227 415 0.15400 6.2e-076 243 1 GTTTYCTCATCTGTAAAATGGG MEME-3 GTTTYCTCATCTGTAAAATGGG 2.0e-008 2.7e-011 -24.34 0.0 219 479 104 135 0.45720 1.1e-013 239 2 CTCADTWA DREME-1 CTCAWTWA 3.5e-168 4.7e-171 -392.19 0.0 65 493 282 360 0.13185 1.9e-173 246 2 RTAGTA DREME-2 ATAGTA 4.2e-068 5.6e-071 -161.76 0.0 71 495 176 290 0.14343 2.3e-073 247 2 GTGCCD DREME-3 GTGCCW 1.0e-007 1.4e-010 -22.71 0.0 87 495 116 345 0.17576 5.5e-013 247 2 BTATCTCA DREME-4 BTATCTCA 4.1e-077 5.5e-080 -182.50 0.0 53 493 121 160 0.10751 2.2e-082 246 2 GGTGYTCA DREME-5 GGTGCTCA 8.0e-040 1.1e-042 -96.63 0.0 53 493 129 308 0.10751 4.4e-045 246 2 AAAATGRG DREME-6 AAAATGRG 2.3e-004 3.1e-007 -14.97 0.0 119 493 55 106 0.24138 1.3e-009 246 2 TCAACWAA DREME-7 TCAACWAA 3.8e-013 5.0e-016 -35.22 0.0 129 493 52 66 0.26166 2.0e-018 246 2 AGCACTTW DREME-9 AGCACTTW 5.0e-008 6.7e-011 -23.43 0.0 55 493 49 145 0.11156 2.7e-013 246 2 TCATTYA DREME-10 TCATTYA 9.1e-062 1.2e-064 -147.17 0.0 84 494 183 295 0.17004 4.9e-067 246 3 M0104_1.02 (ARID3B)_(Mus_musculus)_(DBD_0.99) AWATTAATWAN 4.2e-015 5.7e-018 -39.71 0.0 46 490 122 534 0.09388 2.3e-020 244 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 2.5e-019 3.3e-022 -49.45 0.0 62 492 162 559 0.12602 1.4e-024 245 3 M0108_1.02 (ARID5A)_(Mus_musculus)_(DBD_0.97) NNTAATATTKN 9.3e-002 1.2e-004 -8.99 0.0 146 490 208 520 0.29796 5.1e-007 244 3 M0300_1.02 (ATF2)_(Mus_musculus)_(DBD_1.00) NRTKACGTMA 2.2e-001 3.0e-004 -8.12 0.0 229 491 321 566 0.46640 1.2e-006 245 3 M0428_1.02 (ZNF691)_(Mus_musculus)_(DBD_0.97) RKGAGYAC 2.5e0000 3.3e-003 -5.70 0.0 77 493 131 586 0.15619 1.4e-005 246 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 1.0e-001 1.4e-004 -8.90 0.0 241 491 347 587 0.49084 5.5e-007 245 3 M0437_1.02 (ZNF32)_(Mus_musculus)_(DBD_0.99) TATRTATRT 3.0e-001 4.1e-004 -7.80 0.0 94 492 108 370 0.19106 1.7e-006 245 3 M0629_1.02 DMRT3 MATGTATCAAN 6.4e-002 8.6e-005 -9.37 0.0 104 490 163 533 0.21224 3.5e-007 244 3 M0630_1.02 DMRT1 WWTGTWDCNW 1.4e0000 1.9e-003 -6.25 0.0 99 491 157 562 0.20163 7.9e-006 245 3 M0632_1.02 DMRTA2 WHWGTWDYNN 2.3e-001 3.1e-004 -8.06 0.0 101 491 62 170 0.20570 1.3e-006 245 3 M0633_1.02 DMRT2 KAATKTATWN 9.4e-015 1.3e-017 -38.91 0.0 35 491 107 570 0.07128 5.2e-020 245 3 M0635_1.02 (DMRTC2)_(Mus_musculus)_(DBD_1.00) NAMATGTATHMWN 6.1e-008 8.2e-011 -23.23 0.0 102 488 193 567 0.20902 3.4e-013 243 3 M0718_1.02 FOXK1 DNRTMAACAH 6.0e-001 8.1e-004 -7.12 0.0 91 491 154 587 0.18534 3.3e-006 245 3 M0719_1.02 FOXG1 RTAAACAW 3.4e-007 4.5e-010 -21.52 0.0 37 493 91 553 0.07505 1.8e-012 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 3.6e-001 4.8e-004 -7.63 0.0 157 489 240 581 0.32106 2.0e-006 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 4.3e-003 5.8e-006 -12.07 0.0 89 493 160 588 0.18053 2.3e-008 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 2.6e-004 3.5e-007 -14.87 0.0 105 491 186 579 0.21385 1.4e-009 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 7.0e-006 9.4e-009 -18.48 0.0 95 491 181 590 0.19348 3.8e-011 245 3 M0892_1.02 EMX1 NYTAATKAVN 7.8e-009 1.0e-011 -25.29 0.0 67 491 143 558 0.13646 4.3e-014 245 3 M0893_1.02 ZFHX2 NNTAATTANN 5.4e-006 7.2e-009 -18.75 0.0 45 491 97 525 0.09165 2.9e-011 245 3 M0894_1.02 LBX1 TTAATTAG 4.7e-004 6.2e-007 -14.29 0.0 75 493 135 538 0.15213 2.5e-009 246 3 M0896_1.02 VENTX TTAATTAG 4.5e-025 6.0e-028 -62.68 0.0 51 493 158 578 0.10345 2.5e-030 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 2.4e-022 3.2e-025 -56.40 0.0 43 491 138 579 0.08758 1.3e-027 245 3 M0900_1.02 SHOX HTAATTRV 1.4e-014 1.9e-017 -38.49 0.0 59 493 150 583 0.11968 7.8e-020 246 3 M0905_1.02 (HOXA4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 6.4e-011 8.5e-014 -30.09 0.0 68 492 138 497 0.13821 3.5e-016 245 3 M0906_1.02 (VTN)_(Mus_musculus)_(DBD_0.79) NMTTAATTAR 1.4e-010 1.9e-013 -29.31 0.0 55 491 120 502 0.11202 7.6e-016 245 3 M0931_1.02 (LHX1)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 2.2e-008 3.0e-011 -24.24 0.0 56 492 123 543 0.11382 1.2e-013 245 3 M0943_1.02 (OTP)_(Mus_musculus)_(DBD_1.00) NYTAATTR 8.4e-004 1.1e-006 -13.70 0.0 47 493 93 524 0.09533 4.6e-009 246 3 M0949_1.02 (AC012531.1)_(Mus_musculus)_(DBD_1.00) NTAATDR 2.3e-009 3.1e-012 -26.49 0.0 68 494 114 400 0.13765 1.3e-014 246 3 M0958_1.02 (LHX4)_(Mus_musculus)_(DBD_1.00) BYAATYW 4.5e-002 6.0e-005 -9.72 0.0 52 494 103 586 0.10526 2.4e-007 246 3 M0961_1.02 (BARHL1)_(Mus_musculus)_(DBD_1.00) NTAAWYGNN 3.1e-024 4.2e-027 -60.73 0.0 52 492 160 586 0.10569 1.7e-029 245 3 M0975_1.02 (LHX5)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 2.3e-010 3.1e-013 -28.81 0.0 66 492 145 552 0.13415 1.3e-015 245 3 M0999_1.02 (NKX6-1)_(Mus_musculus)_(DBD_1.00) NWTAATKRN 6.7e-010 9.0e-013 -27.74 0.0 66 492 147 571 0.13415 3.7e-015 245 3 M1012_1.02 (HOXB4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 3.1e-009 4.2e-012 -26.19 0.0 68 492 138 520 0.13821 1.7e-014 245 3 M1025_1.02 (HOXD1)_(Mus_musculus)_(DBD_0.98) NNYVATYA 8.9e-007 1.2e-009 -20.55 0.0 51 493 86 380 0.10345 4.8e-012 246 3 M1027_1.02 (HOXA6)_(Mus_musculus)_(DBD_1.00) WTAATKRBN 3.4e-007 4.6e-010 -21.50 0.0 70 492 138 537 0.14228 1.9e-012 245 3 M1039_1.02 (ENSG00000229544)_(Mus_musculus)_(DBD_1.00) NNTAATDRN 3.9e-004 5.2e-007 -14.47 0.0 70 492 129 542 0.14228 2.1e-009 245 3 M1070_1.02 (HOXC5)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 3.3e-010 4.4e-013 -28.46 0.0 68 492 136 498 0.13821 1.8e-015 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 6.3e-007 8.4e-010 -20.90 0.0 67 493 134 540 0.13590 3.4e-012 246 3 M1073_1.02 (HOXA3)_(Mus_musculus)_(DBD_1.00) HTAATKRNN 2.5e-012 3.4e-015 -33.33 0.0 68 492 157 574 0.13821 1.4e-017 245 3 M1125_1.02 (NKX1-1)_(Mus_musculus)_(DBD_1.00) NNTAATKRNN 1.2e-008 1.6e-011 -24.85 0.0 67 491 146 574 0.13646 6.6e-014 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 1.4e-015 1.9e-018 -40.81 0.0 69 491 166 569 0.14053 7.7e-021 245 3 M1163_1.02 (NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) NWTAATKRN 3.0e-009 4.0e-012 -26.24 0.0 66 492 138 536 0.13415 1.6e-014 245 3 M1582_1.02 (HMG20B)_(Mus_musculus)_(DBD_0.94) NWAWATAATWN 3.8e-001 5.0e-004 -7.59 0.0 236 490 305 524 0.48163 2.1e-006 244 3 M1583_1.02 (BBX)_(Mus_musculus)_(DBD_0.99) TTCATTGA 6.7e-013 9.0e-016 -34.65 0.0 95 493 167 457 0.19270 3.6e-018 246 3 M1589_1.02 (SOX30)_(Mus_musculus)_(DBD_1.00) NNDNRACAAT 5.4e-003 7.2e-006 -11.84 0.0 269 491 389 590 0.54786 2.9e-008 245 3 M1594_1.02 (SOX12)_(Mus_musculus)_(DBD_1.00) HWTTGTYNNN 4.0e-001 5.3e-004 -7.54 0.0 181 491 276 599 0.36864 2.2e-006 245 3 M1601_1.02 (SOX11)_(Mus_musculus)_(DBD_1.00) WTTGTBNNN 3.3e-001 4.4e-004 -7.72 0.0 174 492 268 600 0.35366 1.8e-006 245 3 M1605_1.02 (SOX1)_(Mus_musculus)_(DBD_1.00) ATTSWHNNNN 4.7e-001 6.4e-004 -7.36 0.0 219 491 310 572 0.44603 2.6e-006 245 3 M1863_1.02 FOXD1 GTAAACAW 3.5e-007 4.7e-010 -21.48 0.0 39 493 94 549 0.07911 1.9e-012 246 3 M1868_1.02 GATA2 DSAGATAAGAAHYH 3.6e0000 4.8e-003 -5.33 0.0 229 487 307 550 0.47023 2.0e-005 243 3 M1925_1.02 CEBPA DRTTRTGCAAT 1.6e-001 2.1e-004 -8.46 0.0 254 490 345 557 0.51837 8.7e-007 244 3 M2270_1.02 DUX4 TAAYYYAATCA 8.3e-004 1.1e-006 -13.71 0.0 80 490 132 496 0.16327 4.6e-009 244 3 M2281_1.02 FOXH1 BNSAATCCACA 7.3e-004 9.7e-007 -13.84 0.0 52 490 105 556 0.10612 4.0e-009 244 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 5.1e0000 6.8e-003 -4.99 0.0 34 488 60 497 0.06967 2.8e-005 243 3 M2289_1.02 JUN DDRATGATGTMAT 6.7e-005 8.9e-008 -16.23 0.0 202 488 274 496 0.41393 3.7e-010 243 3 M2296_1.02 MAFK MWDASTCAGCAWWWW 1.4e-002 1.9e-005 -10.85 0.0 108 486 180 563 0.22222 8.0e-008 242 3 M2385_1.02 FOXP2 RWGTAAACAVR 1.9e-003 2.5e-006 -12.91 0.0 244 490 346 561 0.49796 1.0e-008 244 3 M4509_1.02 POU5F1 ATYTGCATRACAAWGRV 9.6e0000 1.3e-002 -4.35 0.0 120 484 162 495 0.24793 5.4e-005 241 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 1.6e-007 2.2e-010 -22.26 0.0 68 486 146 583 0.13992 8.9e-013 242 3 M4600_1.02 GATA1 NSAGATAAGVV 1.1e0000 1.4e-003 -6.55 0.0 254 490 350 574 0.51837 5.9e-006 244 3 M4692_1.02 SIX5 ACTACAAYTC 5.4e-001 7.2e-004 -7.23 0.0 57 491 84 438 0.11609 3.0e-006 245 3 M4840_1.02 (FEZF1)_(Drosophila_melanogaster)_(DBD_0.91) AAAWGMGCAWC 3.6e-005 4.9e-008 -16.84 0.0 22 490 62 572 0.04490 2.0e-010 244 3 M5234_1.02 (SIM1)_(Drosophila_melanogaster)_(DBD_0.89) GGTCACGTAC 6.8e-005 9.1e-008 -16.21 0.0 59 491 90 383 0.12016 3.7e-010 245 3 M5284_1.02 ALX3 BNTAATTRGY 6.8e-007 9.2e-010 -20.81 0.0 67 491 138 564 0.13646 3.7e-012 245 3 M5287_1.02 ALX4 HTAATYNAATTAN 2.1e-011 2.8e-014 -31.22 0.0 60 488 131 511 0.12295 1.1e-016 243 3 M5291_1.02 ARX YTAATTNRATTAN 1.8e-016 2.5e-019 -42.85 0.0 32 488 95 484 0.06557 1.0e-021 243 3 M5294_1.02 BARHL2 NHTAAAYGNY 2.4e-048 3.2e-051 -116.27 0.0 51 491 200 585 0.10387 1.3e-053 245 3 M5300_1.02 BARX1 TAATBGNTWTTTAATBG 4.7e-015 6.3e-018 -39.60 0.0 44 484 108 457 0.09091 2.6e-020 241 3 M5307_1.02 BHLHE22 NAVCATATGTTT 2.1e0000 2.8e-003 -5.86 0.0 59 489 74 371 0.12065 1.2e-005 244 3 M5310_1.02 BSX NTAATBRS 1.0e-004 1.3e-007 -15.83 0.0 67 493 130 560 0.13590 5.4e-010 246 3 M5322_1.02 CPEB1 YTTTTATT 2.1e0000 2.8e-003 -5.87 0.0 11 493 31 582 0.02231 1.2e-005 246 3 M5339_1.02 DLX1 NNTAATTRNN 1.9e-003 2.5e-006 -12.89 0.0 63 491 122 570 0.12831 1.0e-008 245 3 M5342_1.02 DLX4 NTAATTRN 3.3e-005 4.4e-008 -16.93 0.0 59 493 123 575 0.11968 1.8e-010 246 3 M5343_1.02 DLX5 NTAATTRN 8.4e-008 1.1e-010 -22.91 0.0 63 493 139 588 0.12779 4.6e-013 246 3 M5344_1.02 DLX6 NTAATTRB 5.5e-006 7.4e-009 -18.72 0.0 63 493 131 572 0.12779 3.0e-011 246 3 M5345_1.02 DMBX1 NHTAATCCBH 9.4e0000 1.3e-002 -4.37 0.0 45 491 83 588 0.09165 5.2e-005 245 3 M5348_1.02 DRGX NTAATYHAATTAN 4.1e-016 5.5e-019 -42.04 0.0 32 488 96 495 0.06557 2.3e-021 243 3 M5349_1.02 DUXA NTRAYYTAATCAN 6.3e-006 8.4e-009 -18.59 0.0 82 488 148 522 0.16803 3.5e-011 243 3 M5388_1.02 EMX2 NYTAATTAVB 4.7e-004 6.3e-007 -14.27 0.0 67 491 122 528 0.13646 2.6e-009 245 3 M5390_1.02 EN1 VBTAATTRSB 8.5e-007 1.1e-009 -20.59 0.0 51 491 116 578 0.10387 4.7e-012 245 3 M5394_1.02 EN2 NNTAATTRVN 1.0e-007 1.4e-010 -22.72 0.0 41 491 102 572 0.08350 5.5e-013 245 3 M5414_1.02 ESX1 DNTAATTRRN 4.2e-010 5.7e-013 -28.20 0.0 31 491 92 591 0.06314 2.3e-015 245 3 M5427_1.02 EVX1 SNTAATYABB 3.2e-001 4.3e-004 -7.76 0.0 67 491 118 565 0.13646 1.7e-006 245 3 M5428_1.02 EVX2 NNTAATKABB 2.0e-002 2.6e-005 -10.54 0.0 67 491 122 562 0.13646 1.1e-007 245 3 M5445_1.02 FOXD2 DRTMAATATTWDYD 1.1e-013 1.5e-016 -36.46 0.0 39 487 109 540 0.08008 6.0e-019 243 3 M5446_1.02 FOXD4L2 RTAAACA 5.1e-007 6.8e-010 -21.11 0.0 34 494 89 590 0.06883 2.8e-012 246 3 M5460_1.02 FOXL1 RTAAACA 3.2e-006 4.2e-009 -19.28 0.0 34 494 87 584 0.06883 1.7e-011 246 3 M5480_1.02 GBX1 RBTAATTRGB 3.7e0000 4.9e-003 -5.31 0.0 77 491 123 545 0.15682 2.0e-005 245 3 M5481_1.02 GBX2 NYTAATTRSB 7.3e-004 9.8e-007 -13.83 0.0 61 491 120 566 0.12424 4.0e-009 245 3 M5493_1.02 GMEB2 KTRCGTAA 9.3e0000 1.2e-002 -4.39 0.0 229 493 224 398 0.46450 5.1e-005 246 3 M5500_1.02 GSC VYTAATCCBH 2.5e-001 3.3e-004 -8.02 0.0 161 491 241 569 0.32790 1.3e-006 245 3 M5501_1.02 GSC2 NYTAATCCBH 4.3e-001 5.8e-004 -7.46 0.0 201 491 293 582 0.40937 2.4e-006 245 3 M5502_1.02 GSX1 NBTAATKRSN 2.6e-012 3.6e-015 -33.27 0.0 51 491 132 588 0.10387 1.4e-017 245 3 M5503_1.02 GSX2 DYTAATKRVN 4.0e-024 5.4e-027 -60.48 0.0 67 491 186 586 0.13646 2.2e-029 245 3 M5517_1.02 HMBOX1 MYTAGTTAMS 8.1e-004 1.1e-006 -13.73 0.0 121 491 197 551 0.24644 4.4e-009 245 3 M5518_1.02 HMX1 NDTTAATTGNT 4.2e-020 5.6e-023 -51.24 0.0 60 490 166 589 0.12245 2.3e-025 244 3 M5519_1.02 HMX2 NDTTAAKTGBT 1.6e-013 2.1e-016 -36.10 0.0 102 490 218 595 0.20816 8.6e-019 244 3 M5520_1.02 HMX3 BNTTAAKTGNY 1.1e-013 1.5e-016 -36.45 0.0 98 490 212 595 0.20000 6.0e-019 244 3 M5541_1.02 HOXB2 NNTAATKANN 5.6e-007 7.6e-010 -21.00 0.0 67 491 140 572 0.13646 3.1e-012 245 3 M5542_1.02 HOXB3 NYTAATKRNN 1.1e-009 1.4e-012 -27.28 0.0 67 491 148 571 0.13646 5.8e-015 245 3 M5543_1.02 HOXB5 NHTAATKRNN 7.7e-013 1.0e-015 -34.51 0.0 67 491 161 592 0.13646 4.2e-018 245 3 M5544_1.02 HOXC10 DTTTWATKDB 1.6e-020 2.1e-023 -52.23 0.0 57 491 162 592 0.11609 8.5e-026 245 3 M5547_1.02 HOXC11 DGTCRTWAAAH 4.3e-009 5.8e-012 -25.87 0.0 82 490 164 551 0.16735 2.4e-014 244 3 M5551_1.02 HOXC12 TTTTATTRC 5.0e-004 6.7e-007 -14.21 0.0 44 492 96 576 0.08943 2.7e-009 245 3 M5553_1.02 HOXC13 CYAATAAAAH 1.5e-013 2.0e-016 -36.13 0.0 61 491 148 567 0.12424 8.3e-019 245 3 M5557_1.02 HOXD12 GTAATAAAA 1.2e-003 1.6e-006 -13.36 0.0 36 492 83 579 0.07317 6.4e-009 245 3 M5563_1.02 HOXD8 VHWAATTADV 7.3e-007 9.8e-010 -20.74 0.0 45 491 107 581 0.09165 4.0e-012 245 3 M5581_1.02 IRX2 CWTGTCRTGTWN 2.3e0000 3.1e-003 -5.76 0.0 87 489 141 563 0.17791 1.3e-005 244 3 M5582_1.02 IRX5 SWTGTYRTGTWN 4.4e-003 5.9e-006 -12.04 0.0 101 489 174 572 0.20654 2.4e-008 244 3 M5583_1.02 ISL2 YTAAKTGC 1.5e-014 2.0e-017 -38.44 0.0 137 493 270 597 0.27789 8.2e-020 246 3 M5584_1.02 ISX YTAATCTAATTAR 1.5e-020 2.0e-023 -52.29 0.0 40 488 102 394 0.08197 8.0e-026 243 3 M5602_1.02 LHX9 YTAATTRN 3.5e-010 4.7e-013 -28.39 0.0 67 493 151 579 0.13590 1.9e-015 246 3 M5604_1.02 LMX1A YTAATTAA 3.2e-027 4.2e-030 -67.64 0.0 67 493 186 561 0.13590 1.7e-032 246 3 M5605_1.02 LMX1B TTAATTRN 5.1e-027 6.9e-030 -67.15 0.0 47 493 155 582 0.09533 2.8e-032 246 3 M5623_1.02 MEOX1 VSTAATTAHC 1.2e-003 1.6e-006 -13.32 0.0 75 491 134 543 0.15275 6.7e-009 245 3 M5624_1.02 MEOX2 DSTAATTAWN 1.1e-002 1.4e-005 -11.16 0.0 77 491 137 563 0.15682 5.8e-008 245 3 M5631_1.02 MIXL1 NBTAATTRVN 4.9e-011 6.6e-014 -30.35 0.0 67 491 154 580 0.13646 2.7e-016 245 3 M5635_1.02 MNX1 TTTAATTRNH 5.3e-009 7.1e-012 -25.67 0.0 223 491 344 561 0.45418 2.9e-014 245 3 M5637_1.02 MSX1 TAATTGSWWTTTAATTRS 1.4e-012 1.9e-015 -33.90 0.0 61 483 123 437 0.12629 7.9e-018 241 3 M5643_1.02 MYBL1 ACCGTTAAACBG 2.9e-001 3.8e-004 -7.87 0.0 43 489 69 436 0.08793 1.6e-006 244 3 M5672_1.02 NOTO NBTAATTARN 3.9e-013 5.2e-016 -35.19 0.0 67 491 156 563 0.13646 2.1e-018 245 3 M5705_1.02 PAX4 YTAATTAG 3.8e-005 5.1e-008 -16.79 0.0 31 493 73 526 0.06288 2.1e-010 246 3 M5714_1.02 PHOX2A TAATYYAATTA 8.0e-014 1.1e-016 -36.77 0.0 50 490 122 511 0.10204 4.4e-019 244 3 M5715_1.02 PHOX2B TAATYYAATTA 4.4e-011 5.9e-014 -30.47 0.0 56 490 125 514 0.11429 2.4e-016 244 3 M5717_1.02 PITX1 NHTAATCCC 1.9e-001 2.6e-004 -8.26 0.0 48 492 94 579 0.09756 1.1e-006 245 3 M5720_1.02 PITX3 NHTAATCCC 7.8e-002 1.0e-004 -9.16 0.0 48 492 95 579 0.09756 4.3e-007 245 3 M5735_1.02 POU3F3 WAATTWGCATAWW 2.0e0000 2.7e-003 -5.93 0.0 118 488 165 504 0.24180 1.1e-005 243 3 M5740_1.02 POU4F1 ATGMATAATTAATG 1.7e-008 2.3e-011 -24.49 0.0 63 487 128 510 0.12936 9.5e-014 243 3 M5743_1.02 POU4F3 RTGMATWATTAATGAV 3.9e-017 5.2e-020 -44.39 0.0 39 485 113 517 0.08041 2.2e-022 242 3 M5744_1.02 POU5F1B ATTWGCATA 2.9e0000 3.9e-003 -5.55 0.0 88 492 137 545 0.17886 1.6e-005 245 3 M5746_1.02 POU6F2 WTAATKAGST 4.7e-039 6.3e-042 -94.86 0.0 41 491 163 578 0.08350 2.6e-044 245 3 M5771_1.02 RAX DYTAATTRRY 5.0e-015 6.7e-018 -39.54 0.0 59 491 152 583 0.12016 2.7e-020 245 3 M5772_1.02 RAX2 BTAATTRR 9.3e-012 1.2e-014 -32.02 0.0 59 493 143 585 0.11968 5.1e-017 246 3 M5807_1.02 SHOX2 YTAATTRR 4.8e-014 6.4e-017 -37.29 0.0 67 493 162 584 0.13590 2.6e-019 246 3 M5815_1.02 SOX14 ACAATAMCATTG 4.1e0000 5.5e-003 -5.21 0.0 171 489 123 259 0.34969 2.3e-005 244 3 M5873_1.02 TBR1 AGGTGTGAAA 3.0e-001 4.0e-004 -7.82 0.0 143 491 217 565 0.29124 1.6e-006 245 3 M5882_1.02 TBX19 DTTMRCACVTAGGTGTGAAW 6.1e0000 8.2e-003 -4.81 0.0 55 481 53 264 0.11435 3.4e-005 240 3 M5941_1.02 UNCX NTAATYBAATTAN 1.5e-020 2.0e-023 -52.29 0.0 52 488 147 554 0.10656 8.0e-026 243 3 M5944_1.02 VAX1 YTAATTAN 4.0e-006 5.4e-009 -19.04 0.0 67 493 137 570 0.13590 2.2e-011 246 3 M5945_1.02 VAX2 YTAATTAN 2.2e-005 3.0e-008 -17.34 0.0 67 493 134 567 0.13590 1.2e-010 246 3 M5949_1.02 VSX1 YTAATTAN 6.6e-005 8.8e-008 -16.24 0.0 45 493 97 551 0.09128 3.6e-010 246 3 M5973_1.02 ZSCAN16 AGGTGTTCTGTTAACACT 1.1e-040 1.5e-043 -98.61 0.0 45 483 104 229 0.09317 6.2e-046 241 3 M5980_1.02 ZNF784 AGGTAGGTAC 5.9e-001 7.9e-004 -7.14 0.0 75 491 105 445 0.15275 3.2e-006 245 3 M6037_1.02 (IRX1)_(Mus_musculus)_(DBD_1.00) TTTKTCATGTWR 2.2e-009 2.9e-012 -26.57 0.0 93 489 173 519 0.19018 1.2e-014 244 3 M6111_1.02 (ZNF652)_(Mus_musculus)_(DBD_1.00) NBAAAGGGTTAAH 5.6e-005 7.6e-008 -16.40 0.0 140 488 168 385 0.28689 3.1e-010 243 3 M6114_1.02 FOXA1 WAWGYAAAYA 1.7e-004 2.3e-007 -15.27 0.0 127 491 216 579 0.25866 9.5e-010 245 3 M6141_1.02 ALX1 TAATBYAATTAY 6.1e-003 8.1e-006 -11.72 0.0 227 489 307 526 0.46421 3.3e-008 244 3 M6147_1.02 ARID3A TWWAWTTTGATWYYVWTTAATH 5.0e-016 6.7e-019 -41.84 0.0 49 479 122 480 0.10230 2.8e-021 239 3 M6157_1.02 BARX2 TYRWTAATKR 1.2e-004 1.6e-007 -15.62 0.0 127 491 208 550 0.25866 6.7e-010 245 3 M6166_1.02 CDC5L RWTAYRTTAAMWCVC 1.9e-005 2.6e-008 -17.48 0.0 58 486 113 515 0.11934 1.1e-010 242 3 M6182_1.02 CRX YTAATCHB 4.8e-005 6.4e-008 -16.56 0.0 49 493 108 584 0.09939 2.6e-010 246 3 M6186_1.02 DBP KVTTRCATAAB 8.9e-003 1.2e-005 -11.33 0.0 204 490 297 561 0.41633 4.9e-008 244 3 M6188_1.02 DLX2 ATAATTRB 1.3e-004 1.7e-007 -15.59 0.0 87 493 150 529 0.17647 6.9e-010 246 3 M6189_1.02 DLX3 GMTAATTRSW 9.5e-002 1.3e-004 -8.97 0.0 81 491 132 530 0.16497 5.2e-007 245 3 M6225_1.02 MECOM WAGAYAAGATAANAKW 6.9e-004 9.2e-007 -13.90 0.0 73 485 120 473 0.15052 3.8e-009 242 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 1.0e-002 1.4e-005 -11.18 0.0 66 488 125 575 0.13525 5.8e-008 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 3.3e-002 4.4e-005 -10.03 0.0 68 486 113 502 0.13992 1.8e-007 242 3 M6237_1.02 FOXD3 AAACAAACA 7.2e0000 9.7e-003 -4.63 0.0 208 492 286 564 0.42276 4.0e-005 245 3 M6238_1.02 FOXF1 WAAATAAACAW 1.9e0000 2.5e-003 -5.99 0.0 86 490 139 562 0.17551 1.0e-005 244 3 M6239_1.02 FOXF2 HWADGTAAACA 4.2e-002 5.6e-005 -9.80 0.0 66 490 120 563 0.13469 2.3e-007 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 1.7e-008 2.3e-011 -24.51 0.0 33 491 90 577 0.06721 9.3e-014 245 3 M6246_1.02 FOXO3 MKGWAAACAARYM 2.5e0000 3.4e-003 -5.69 0.0 90 488 148 579 0.18443 1.4e-005 243 3 M6247_1.02 FOXO4 MRTAAACAA 1.8e-002 2.4e-005 -10.65 0.0 56 492 110 585 0.11382 9.6e-008 245 3 M6250_1.02 FOXQ1 AAATAAACAATD 6.4e-001 8.6e-004 -7.06 0.0 91 489 130 478 0.18609 3.5e-006 244 3 M6256_1.02 GATA4 RSWGATAAV 5.5e-005 7.4e-008 -16.42 0.0 88 492 166 586 0.17886 3.0e-010 245 3 M6257_1.02 GATA5 WVANWGATAABTYRRHK 3.8e0000 5.0e-003 -5.29 0.0 266 484 359 564 0.54959 2.1e-005 241 3 M6258_1.02 GATA6 NWGATAA 7.0e-016 9.4e-019 -41.51 0.0 98 494 212 577 0.19838 3.8e-021 246 3 M6269_1.02 HBP1 AYYCATTGA 5.0e-031 6.7e-034 -76.38 0.0 70 492 204 582 0.14228 2.8e-036 245 3 M6280_1.02 HMGA2 AATWWYSSSSAATAT 4.6e-001 6.2e-004 -7.39 0.0 170 486 164 349 0.34979 2.6e-006 242 3 M6281_1.02 HNF1A KGKTAAWBATTAACY 6.0e-004 8.1e-007 -14.03 0.0 52 486 102 527 0.10700 3.4e-009 242 3 M6282_1.02 HNF1B GTTAAWYATTAACY 7.2e-009 9.7e-012 -25.36 0.0 125 487 217 536 0.25667 4.0e-014 243 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 5.3e-002 7.1e-005 -9.56 0.0 39 487 74 504 0.08008 2.9e-007 243 3 M6289_1.02 HOXA9 WCATAAAYYRTH 1.6e0000 2.2e-003 -6.12 0.0 149 489 212 541 0.30470 9.0e-006 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 3.5e-005 4.6e-008 -16.89 0.0 172 490 274 572 0.35102 1.9e-010 244 3 M6292_1.02 HOXA5 CATTAATYAR 1.5e-004 2.0e-007 -15.44 0.0 75 491 135 532 0.15275 8.0e-010 245 3 M6296_1.02 HOXB6 KKCATMAATCAWT 4.9e-001 6.5e-004 -7.33 0.0 222 488 233 410 0.45492 2.7e-006 243 3 M6298_1.02 HOXB8 BMATTAATCAA 1.5e0000 2.0e-003 -6.22 0.0 74 490 101 439 0.15102 8.2e-006 244 3 M6300_1.02 HOXC8 GSBHATYAATSAAR 3.1e-005 4.1e-008 -17.00 0.0 65 487 125 534 0.13347 1.7e-010 243 3 M6301_1.02 HOXD10 AATTAAARCA 5.5e-002 7.4e-005 -9.51 0.0 197 491 289 572 0.40122 3.0e-007 245 3 M6303_1.02 HOXD4 TTAATTKW 2.1e-016 2.9e-019 -42.70 0.0 67 493 169 590 0.13590 1.2e-021 246 3 M6304_1.02 HOXD9 HMATNAAWYT 9.3e-005 1.2e-007 -15.90 0.0 69 491 134 564 0.14053 5.1e-010 245 3 M6315_1.02 ISL1 SYTAATR 6.8e-013 9.1e-016 -34.63 0.0 66 494 152 559 0.13360 3.7e-018 246 3 M6327_1.02 LEF1 CTTTGWW 3.0e0000 4.0e-003 -5.52 0.0 404 494 524 594 0.81781 1.6e-005 246 3 M6328_1.02 LHX2 YRSDTKYAATWAG 3.5e-030 4.6e-033 -74.45 0.0 40 488 144 558 0.08197 1.9e-035 243 3 M6329_1.02 LHX3 AAAATTAATTARY 3.1e-011 4.2e-014 -30.80 0.0 46 488 102 456 0.09426 1.7e-016 243 3 M6347_1.02 MSX2 TAATTNK 1.6e-003 2.2e-006 -13.04 0.0 44 494 93 568 0.08907 8.8e-009 246 3 M6357_1.02 NANOG KTTAATGG 4.8e-008 6.4e-011 -23.47 0.0 131 493 226 554 0.26572 2.6e-013 246 3 M6368_1.02 NFIL3 VKVMRTTACRTAAY 3.7e-005 5.0e-008 -16.82 0.0 67 487 108 428 0.13758 2.0e-010 243 3 M6375_1.02 NKX2-2 HAAVYACTTRAM 3.5e-005 4.7e-008 -16.88 0.0 103 489 180 552 0.21063 1.9e-010 244 3 M6376_1.02 NKX2-5 TYAAGTG 1.2e-002 1.6e-005 -11.01 0.0 52 494 106 594 0.10526 6.7e-008 246 3 M6378_1.02 NKX3-1 WWTAAGTATWTWW 9.2e-016 1.2e-018 -41.24 0.0 38 488 113 557 0.07787 5.1e-021 243 3 M6380_1.02 NOBOX HTAATTRSY 3.0e-012 4.0e-015 -33.16 0.0 52 492 131 570 0.10569 1.6e-017 245 3 M6382_1.02 NR1D1 WYTGACCTAYTTWT 9.7e0000 1.3e-002 -4.35 0.0 237 487 277 481 0.48665 5.4e-005 243 3 M6400_1.02 OTX1 BTAAKCCT 2.5e-001 3.4e-004 -7.98 0.0 49 493 95 580 0.09939 1.4e-006 246 3 M6401_1.02 OTX2 HYYTAATCCBWKHDM 6.8e0000 9.1e-003 -4.69 0.0 60 486 102 559 0.12346 3.8e-005 242 3 M6415_1.02 PDX1 CTAATTACY 5.4e-003 7.2e-006 -11.84 0.0 82 492 133 503 0.16667 2.9e-008 245 3 M6417_1.02 POU1F1 RWATATTCATKAR 7.8e0000 1.0e-002 -4.56 0.0 62 488 106 568 0.12705 4.3e-005 243 3 M6425_1.02 POU3F1 HTTGCATWWSMATB 1.8e-001 2.5e-004 -8.31 0.0 169 487 247 553 0.34702 1.0e-006 243 3 M6426_1.02 POU3F2 CATRAATWWT 9.9e-007 1.3e-009 -20.44 0.0 41 491 99 575 0.08350 5.4e-012 245 3 M6427_1.02 POU4F2 MARCTCATTAATR 9.7e-012 1.3e-014 -31.98 0.0 48 488 115 514 0.09836 5.3e-017 243 3 M6429_1.02 POU6F1 CATAAWTTATGCR 1.3e0000 1.7e-003 -6.38 0.0 12 488 24 334 0.02459 7.0e-006 243 3 M6438_1.02 PROP1 RASHAATTAAHWTVR 1.4e-012 1.9e-015 -33.89 0.0 58 486 142 569 0.11934 7.9e-018 242 3 M6440_1.02 PRRX2 YTAATTR 1.2e-027 1.7e-030 -68.57 0.0 60 494 180 583 0.12146 6.7e-033 246 3 M6471_1.02 SOX13 YATTGTTY 2.6e-001 3.4e-004 -7.97 0.0 179 493 267 581 0.36308 1.4e-006 246 3 M6473_1.02 SOX17 CAAMAATNHHCATTGTCS 4.1e0000 5.5e-003 -5.21 0.0 41 483 53 349 0.08489 2.3e-005 241 3 M6477_1.02 SOX5 WAACAATR 3.9e-002 5.3e-005 -9.85 0.0 189 493 284 582 0.38337 2.1e-007 246 3 M6508_1.02 TEAD3 GAHATTYYWGCYBYW 6.6e0000 8.9e-003 -4.73 0.0 294 486 400 584 0.60494 3.7e-005 242 3 M6510_1.02 TEF TGTTTATRTAAMTK 3.4e-003 4.5e-006 -12.31 0.0 191 487 280 550 0.39220 1.9e-008 243 3 M6534_1.02 VSX2 WDAGCTAATTA 3.5e-001 4.6e-004 -7.68 0.0 36 490 63 457 0.07347 1.9e-006 244 3 M6546_1.02 ZFHX3 ATTAWTAATTA 5.1e-004 6.9e-007 -14.19 0.0 34 490 66 441 0.06939 2.8e-009 244 3 M6555_1.02 ZNF333 BKATAATGA 3.1e0000 4.2e-003 -5.48 0.0 162 492 205 488 0.32927 1.7e-005 245 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).