******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF660.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr12:96906771-96907271 1.0000 100 chr12:103956950-10395745 1.0000 100 chr6:28742721-28743221 1.0000 100 chr17:45320842-45321342 1.0000 100 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chr1:109438736-109439236 1.0000 100 chr1:44213157-44213657 1.0000 100 chr8:93846755-93847255 1.0000 100 chr22:30017315-30017815 1.0000 100 chr16:19517270-19517770 1.0000 100 chr11:106078021-10607852 1.0000 100 chr7:23298894-23299394 1.0000 100 chr10:124917810-12491831 1.0000 100 chr7:99751548-99752048 1.0000 100 chr5:399675-400175 1.0000 100 chr5:172437410-172437910 1.0000 100 chr19:41501316-41501816 1.0000 100 chr17:70661149-70661649 1.0000 100 chr15:89383546-89384046 1.0000 100 chr15:65610930-65611430 1.0000 100 chr2:55014920-55015420 1.0000 100 chr14_GL000225v1_random: 1.0000 100 chr4:53011921-53012421 1.0000 100 chr6:131628048-131628548 1.0000 100 chr7:23418071-23418571 1.0000 100 chr8:30382234-30382734 1.0000 100 chr9:129334002-129334502 1.0000 100 chr19:35757455-35757955 1.0000 100 chr1:153880943-153881443 1.0000 100 chr6:53927177-53927677 1.0000 100 chr19:48539554-48540054 1.0000 100 chr12:57846932-57847432 1.0000 100 chr2:170530187-170530687 1.0000 100 chr7:116547259-116547759 1.0000 100 chr7:103100300-103100800 1.0000 100 chr1:80054126-80054626 1.0000 100 chr17:26603654-26604154 1.0000 100 chr15:33126616-33127116 1.0000 100 chr10:21724680-21725180 1.0000 100 chr1:34763451-34763951 1.0000 100 chr1:23544613-23545113 1.0000 100 chr10:112565447-11256594 1.0000 100 chr10:87586164-87586664 1.0000 100 chr17:28599396-28599896 1.0000 100 chr1:76759959-76760459 1.0000 100 chr11:85628101-85628601 1.0000 100 chr14_GL000225v1_random: 1.0000 100 chrX:78103807-78104307 1.0000 100 chr1:197180308-197180808 1.0000 100 chr7:104932218-104932718 1.0000 100 chr22:25942957-25943457 1.0000 100 chr20:32270580-32271080 1.0000 100 chr4:82374296-82374796 1.0000 100 chr1:229221077-229221577 1.0000 100 chr19:50388494-50388994 1.0000 100 chr5:124908556-124909056 1.0000 100 chr7:113421625-113422125 1.0000 100 chr7:94446292-94446792 1.0000 100 chr5:124706624-124707124 1.0000 100 chr1:212488389-212488889 1.0000 100 chr5:66757140-66757640 1.0000 100 chr16:84138675-84139175 1.0000 100 chr5:10601227-10601727 1.0000 100 chr7:112422833-112423333 1.0000 100 chr16:69073279-69073779 1.0000 100 chr6:155177323-155177823 1.0000 100 chr6:118800479-118800979 1.0000 100 chr8:37256709-37257209 1.0000 100 chr5:177546330-177546830 1.0000 100 chr13:112102298-11210279 1.0000 100 chr5:124661428-124661928 1.0000 100 chr6:43630028-43630528 1.0000 100 chr4:185095932-185096432 1.0000 100 chr1:125179940-125180440 1.0000 100 chr12:40224917-40225417 1.0000 100 chr12:54039773-54040273 1.0000 100 chr5:157511503-157512003 1.0000 100 chr15:38354223-38354723 1.0000 100 chr8:120859583-120860083 1.0000 100 chr4:38620878-38621378 1.0000 100 chr12:53501377-53501877 1.0000 100 chr10:116891095-11689159 1.0000 100 chr17:78974979-78975479 1.0000 100 chr3:14125641-14126141 1.0000 100 chr22:37330363-37330863 1.0000 100 chr6:37171929-37172429 1.0000 100 chr1:200510053-200510553 1.0000 100 chr1:46522108-46522608 1.0000 100 chr1:110338807-110339307 1.0000 100 chr1:223819689-223820189 1.0000 100 chr16:1271747-1272247 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF660.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF660.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF660.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 599 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59900 N= 599 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.242 C 0.258 G 0.258 T 0.242 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF660.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.250 C 0.250 G 0.250 T 0.250 ******************************************************************************** ******************************************************************************** MOTIF CYTGGCASYKTGCCARR MEME-1 width = 17 sites = 101 llr = 1316 E-value = 1.0e-181 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYTGGCASYKTGCCARR MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1:::::6:121:::942 pos.-specific C 54:::a1542::aa::2 probability G 2:1aa:13143a:::54 matrix T 269:::31436:::::1 bits 2.0 ** *** 1.8 *** *** 1.6 *** **** 1.4 **** **** Relative 1.2 **** **** Entropy 1.0 ***** **** (18.8 bits) 0.8 ***** ***** 0.6 ***** * ****** 0.4 ******** ****** 0.2 ********* ******* 0.0 ----------------- Multilevel CTTGGCACCGTGCCAGG consensus TC TGTTG AA sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTGGCASYKTGCCARR MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------- chr19:48539554-48540054 + 57 1.16e-10 gtgcagatct cttggcactgtgccagg cactgagtat chr1:234977852-234978352 + 35 1.16e-10 CTGGCAGAAG CTTGGCACTGTGCCAGG CAGGAGAGAG chr12:120646956-12064745 - 68 2.33e-10 ATGCAAAGGG CTTGGCACTGTGCCAAG CATCTAGAAA chr6:31777110-31777610 - 61 7.57e-10 TGGGTCTGTC CCTGGCACTGTGCCAGG CCTGAGTCAC chr1:181127031-181127531 - 48 1.80e-09 GTCTAGGCTG CTTGGCACAGTGCCAGG TGCTCCATAG chr14:95291759-95292259 + 39 1.80e-09 tgactgtgtt cctggcactgtgccaag ggttgacgtg chr2:165825020-165825520 - 32 2.97e-09 CAACCTTGAG TTTGGCACTGTGCCAAG CCACAATCAA chr12:121404691-12140519 + 30 5.06e-09 ATTTGAAAAT CCTGGCACTGTGCCAGA AAGAGAGCTG chr5:41747193-41747693 + 40 6.93e-09 ctgagtatgg gttggcactgtgccaag tgttagataa chr5:10288461-10288961 + 27 9.31e-09 AAAGCAGCCA CCTGGCACCGGGCCAAG CCCTCTTAGG chr17:40314533-40315033 - 18 1.18e-08 AAGAGCTGAG CCTGGCACCTTGCCAGC CCCAGGACAG chrX:13647559-13648059 + 31 2.11e-08 AATAGGCCCT CCTGGCAGCATGCCAGG TCATATCATG chr16:29943427-29943927 - 26 2.11e-08 GAATAATAAA CTTGGCAGCTGGCCAAG TTAGGTCAGA chr13:112849465-11284996 + 43 3.28e-08 gttgttgagt tttggctgtgtgccagg gattcagtgg chr21:29277386-29277886 - 43 3.28e-08 ATTGATTTAC TTTGGCACTTTGCCAAA AATTGATTAC chr1:110176232-110176732 + 26 4.02e-08 CTGCTTCTGC CTTGGCTCCATGCCAGA TGTGTGGCAG chr15:74546102-74546602 + 68 4.77e-08 CTGCCCCCGC CTTGGCAGCTGGCCAGC GTCTGCGTGT chr17:21040149-21040649 - 75 4.77e-08 GCAGTGCCA GTTGGCAGTGTGCCAGC AAGGAGCCCT chr16:1271747-1272247 + 23 5.59e-08 CGTCTGCATG GTTGGCACCCTGCCAGC TGGTCTCTGG chr1:234523521-234524021 - 50 5.59e-08 GGCGAGGGAA CCTGGCAGCCTGCCAGC CTGTAAAAAC chr2:178484603-178485103 - 49 5.59e-08 CTATCACAGA CTTGGCTCCATGCCAAA GCTGACGACA chr6:40882271-40882771 + 77 5.59e-08 TCAAGCAATT CCTGGCAGCGGGCCAGC TGATGGT chr1:230145424-230145924 - 31 6.49e-08 CAAGGCCCCC ATTGGCACTATGCCAAG GTGGGTGGCT chr5:145975508-145976008 - 18 6.49e-08 TTCTGTTTCC TTTGGCTCTCTGCCAAG GGTCCAGTGG chr1:44327756-44328256 - 20 7.64e-08 AGCCAGCTTC CCTGGCTCCTGGCCAAG TAGTCTGACC chr5:109468677-109469177 - 35 9.01e-08 CCATGACAAC GTTGGCTCCCTGCCAAG AACCACAGTG chr2:227818167-227818667 + 46 9.01e-08 TCAGTATGTG CTGGGCACCGTGCCAAG TGCTAGAGAG chr18:48901926-48902426 + 18 9.01e-08 GCCTGTTTGC CTTGGCCCCGGGCCAGG GCCGCCCCGC chr1:221284028-221284528 - 50 9.01e-08 TGACTTATTC CTTGGCATTTTGCCAAC TACCCACAAC chr10:87586164-87586664 + 51 1.06e-07 ccctaggtaa tttggcagcctgccaaa tCCTACTTAT chr11:114159934-11416043 + 30 1.06e-07 TTATTGTAGT CCTGGCTCCAGGCCAGG CCTGGCTGCG chr21:16420024-16420524 + 48 1.06e-07 TGCACATGAT TTTGGCACTTGGCCAAA ATCAACTTCC chr12:8243257-8243757 + 30 1.23e-07 TTGACTATGT CTTGGCACATGGCCAGG CGGTGCGCGG chr3:188348599-188349099 - 28 1.23e-07 CCCCAAGAAT GCTGGCAGCATGCCAGG CATTGTCAGC chr2:58042470-58042970 - 33 1.40e-07 AAAGGACTTT CTTGGCTGTATGCCAAC TTGTAGGTAT chr6:80132940-80133440 + 27 1.60e-07 GAACATCCCT GTTGGCATTGTGCCAGC ACTTGAACTG chr13:67224120-67224620 + 72 1.60e-07 CTACTGCGGG ATTGGCACCTGGCCAGC ACAAGCGACA chr6:37240130-37240630 + 59 1.60e-07 acagttcttt cttggctgttggccaga gaactcagtt chr5:10601227-10601727 + 28 1.80e-07 cgaggctcaa cctggctgggtgccaac tcctcccagc chr1:153880943-153881443 - 44 1.80e-07 CTGACTGAGT GTTGGCATCATGCCAGG GGCTGCAAAG chr7:128523180-128523680 + 64 1.80e-07 ctccccagtg actggcagcatgccagg AATGGGGGAG chr8:13276305-13276805 - 53 1.80e-07 GCCGCGCGCG CTTGGCCGCGGGCCAGG AGGCCGCCTG chrX:39755607-39756107 + 67 2.06e-07 CAGGCCCAGC CCTGGCACCCAGCCAGC TGGGAGGCTG chr1:12478147-12478647 - 56 2.06e-07 CAGGCTTGGG CCTGGCATTGGGCCAGA CCGCAATCAA chr12:29350004-29350504 - 61 2.06e-07 GTATTTACTA TCTGGCTCTTTGCCAAA AATGTTTGCC chr5:73031870-73032370 + 64 2.34e-07 TGAGTTGTCA ACTGGCACTGAGCCAGG CACGCAAAGC chr17:1080693-1081193 - 81 2.34e-07 GCC CCTGGCTTTCTGCCAGG TGGCTTCTCA chr8:30141564-30142064 - 38 2.34e-07 CTAACCTGTA CTTGGCACTGTGCCCGG AGCCGTGACA chr3:61894982-61895482 - 50 2.64e-07 TTCCAGATCC CTTGGCTCCCAGCCAGA CCAACTAAGT chr1:235067771-235068271 - 52 2.96e-07 CGTCATGACT TTTGGCTCCCAGCCAGG TGCGGTGGCA chr1:80054126-80054626 - 69 3.29e-07 TACAGATAAT ATTGGCTCCGAGCCAAG AATGAGCTCA chr17:73474227-73474727 - 55 3.29e-07 CCAGAGCGAA CTTGGCACGTGGCCAGT TGTGAGTCAG chr19:41501316-41501816 - 48 3.66e-07 AGATGGTTCC TTTGGCTCTCTGCCAAT ACAGGGTGAA chr5:125198493-125198993 - 31 3.66e-07 ACAGAGATTG GTTGGCTGCCTGCCAAA AGTTCAGTGC chr17:46742759-46743259 + 21 3.66e-07 GCTTCTTACT CTTGGCTCTGAGCCAAT TTCCTCCTCA chr1:31215941-31216441 + 40 4.06e-07 ACAATCATTT CCTGGCCCTGGGCCAGA GGCGGCTGGT chr5:32217734-32218234 - 61 4.06e-07 CTCTTTCCAT TTTGGCTGCTGGCCAAA TACTCATTTT chr6:53927177-53927677 + 30 4.51e-07 AGGTTTTGTG TCTGGCAGTAGGCCAGA AGGATAGTGT chr15:89383546-89384046 - 42 4.51e-07 CCAAGAAGAC GCTGGCTCTGAGCCAAG ACGCATCCCA chr17:29042484-29042984 + 54 4.51e-07 GGGTCTTATT CTGGGCATCGTGCCAAG TTCTTAGCGG chr10:21724680-21725180 - 62 4.99e-07 GCACTGTCTT TTTGGCAGCAAGCCAGC TCTACTAACT chr12:56636711-56637211 - 30 4.99e-07 GGGAGGGCTT TTTGGCGCGGGGCCAGG GGTGGAGTAG chr1:232620479-232620979 - 31 5.49e-07 TTTGTTTAAA ACTGGCAGTTTGCCAGT CAGAATAGCT chr19:1361997-1362497 - 45 5.49e-07 TCTTCGGAAG ACTGGCACTCTGCCAAT AATGTGATAT chr21:34543871-34544371 + 34 5.49e-07 agctgcctta cttggcaacttgccaga attcttgccc chr6:118660158-118660658 + 67 6.02e-07 AGCTGGGGGA GTTGGCAGATTGCCAGA TAAGGGGCCA chr10:18607480-18607980 + 47 6.02e-07 catctggagC ATTGGCATGGGGCCaag aatacaggct chr7:132255818-132256318 + 21 6.02e-07 AGGAAATCAT GCTGGCTCCTAGCCAAG TACAAGAGGC chr15:70062307-70062807 - 36 7.22e-07 TACTTAGTTT TTTGGCCGCCTGCCAGC CAGAGGCGGG chr1:43836442-43836942 - 44 7.22e-07 CTGAGTGAGC CCTGGCTGGCTGCCAGT TCTGAGTCCC chr5:81736013-81736513 + 47 7.22e-07 CAAGCACAAA ATTGGCGCTATGCCAAA AGCCCTGTTT chr17:80219346-80219846 - 42 8.62e-07 CCTTCTGAGG TCTGGCGCCCTGCCAGT TGCCCTCTTT chr9:129639988-129640488 + 34 9.37e-07 TCCCTTAGCT CTGGGCACAGTGCCAGC AGCCGCATTT chr5:37717519-37718019 + 27 1.01e-06 GATTGTTTGG TTTGGCAGGTAGCCAGC TCTCTGCTAT chr17:58391416-58391916 - 46 1.10e-06 GGTAAGAATT TCGGGCACCTGGCCAAG ATACACATTG chr1:203626482-203626982 - 51 1.10e-06 AGAGGTGGGA CTTGGCGCGAGGCCAAA CCATTACTCT chr5:142223565-142224065 - 38 1.10e-06 ATGAGTCACC ATTGGCACCCAGCCAAT GCTACTTCTT chr3:169657311-169657811 - 48 1.30e-06 GAGACTGGGT TCTGGCTTCTTGCCAAT TCTGTACAAT chr1:21139519-21140019 - 72 1.64e-06 GAAGCAGGAG TTTGGCTTGAGGCCAGG TGTTCAGGGC chr8:16825905-16826405 + 50 1.64e-06 GACCTAATTT CTGGGCACCGTGCCACA TTTCTAGTCA chr19:11344360-11344860 - 84 1.64e-06 . CTGGGCCTGCTGCCAAG CTGTGGTGAC chr5:172437410-172437910 - 45 1.76e-06 GGAAAAAAAT ATTGGCAGCCTGCCACC TCCAGTGTGT chr5:140295371-140295871 - 54 1.90e-06 CATCCAGTCT TTTGGCGTGTTGCCAGC ACATTTTAGT chr1:15886195-15886695 + 12 1.90e-06 TCCAGTTTGA GTTGGCTGCTTGCCACC TCCCGGAGGC chr2:170530187-170530687 - 19 2.22e-06 CACTCTGAGT CCTGGGAGCTGGCCAGG AGCACTGGCT chr19:34218189-34218689 + 72 2.39e-06 TTTCTCAAAC CCAGGCAGTTTGCCAAA CCTCAGCAAA chr12:10721987-10722487 + 61 2.39e-06 ACATCTCTTT GCTGGCATGTGGCCAAC AGGAGCATGG chr1:224204691-224205191 - 69 2.57e-06 TAAGTGTGTG GCTGGCGCAGAGCCAGG CCCTCGGAGA chr16:75305374-75305874 - 76 2.57e-06 TATTGCAC CTTGACGCTGTGCCAAG TGCTGTTTTA chr9:136109548-136110048 - 84 2.75e-06 . CTGGGCAGCGTGCCCGG GCATGCCGGC chr1:229221448-229221948 + 49 2.96e-06 GCACATTTTC TTTGGCAATAGGCCAAC TATTTGTTCC chr1:234997177-234997677 - 25 3.43e-06 ATCCCTGGCA TCTGGCGCTGTGCCATG TCCCGTGGCG chr5:139517839-139518339 - 34 3.43e-06 GAGGCCGGGC CTTGGCCCCGGGCCGGA TGAAGTCACC chr1:230104614-230105114 + 16 3.68e-06 TCTGAAGGCA CCTGGGCCCTTGCCAGG CTGAGTCACA chr1:234724153-234724653 - 43 3.94e-06 AAATGAGGCC TCTGGCGGGCAGCCAAG TTACAAAGAA chr17:28599396-28599896 + 8 4.51e-06 gtgtgtg cctggcgctatgccgaa tgccgtgtag chr17:15828724-15829224 + 38 6.69e-06 AGGCAGCCCT CTTGGTACAGGGCCAGT GCCTCCCAGG chr17:20646677-20647177 + 17 6.69e-06 AGGCAGCCCT CTTGGTACAGGGCCAGT GCCTCCCAGG chr1:155983348-155983848 - 69 1.14e-05 TTCAGTCCTT ATTGGCTTTAGGCCCAG AGGCCTTCTC chr9:11171-11671 - 78 2.67e-05 CTGCCA GCAGGCGGCGTGCCACC ACTATACAGT chrX:78103807-78104307 + 23 4.33e-05 GTTCCTTGCG GTTCGCGGCGTGCCGGA CGTGACAAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTGGCASYKTGCCARR MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:48539554-48540054 1.2e-10 56_[+1]_27 chr1:234977852-234978352 1.2e-10 34_[+1]_49 chr12:120646956-12064745 2.3e-10 67_[-1]_16 chr6:31777110-31777610 7.6e-10 60_[-1]_23 chr1:181127031-181127531 1.8e-09 47_[-1]_36 chr14:95291759-95292259 1.8e-09 38_[+1]_45 chr2:165825020-165825520 3e-09 31_[-1]_52 chr12:121404691-12140519 5.1e-09 29_[+1]_54 chr5:41747193-41747693 6.9e-09 39_[+1]_44 chr5:10288461-10288961 9.3e-09 26_[+1]_57 chr17:40314533-40315033 1.2e-08 17_[-1]_66 chrX:13647559-13648059 2.1e-08 30_[+1]_53 chr16:29943427-29943927 2.1e-08 25_[-1]_58 chr13:112849465-11284996 3.3e-08 42_[+1]_41 chr21:29277386-29277886 3.3e-08 42_[-1]_41 chr1:110176232-110176732 4e-08 25_[+1]_58 chr15:74546102-74546602 4.8e-08 67_[+1]_16 chr17:21040149-21040649 4.8e-08 74_[-1]_9 chr16:1271747-1272247 5.6e-08 22_[+1]_61 chr1:234523521-234524021 5.6e-08 49_[-1]_34 chr2:178484603-178485103 5.6e-08 48_[-1]_35 chr6:40882271-40882771 5.6e-08 76_[+1]_7 chr1:230145424-230145924 6.5e-08 30_[-1]_53 chr5:145975508-145976008 6.5e-08 17_[-1]_66 chr1:44327756-44328256 7.6e-08 19_[-1]_64 chr5:109468677-109469177 9e-08 34_[-1]_49 chr2:227818167-227818667 9e-08 45_[+1]_38 chr18:48901926-48902426 9e-08 17_[+1]_66 chr1:221284028-221284528 9e-08 49_[-1]_34 chr10:87586164-87586664 1.1e-07 50_[+1]_33 chr11:114159934-11416043 1.1e-07 29_[+1]_54 chr21:16420024-16420524 1.1e-07 47_[+1]_36 chr12:8243257-8243757 1.2e-07 29_[+1]_54 chr3:188348599-188349099 1.2e-07 27_[-1]_56 chr2:58042470-58042970 1.4e-07 32_[-1]_51 chr6:80132940-80133440 1.6e-07 26_[+1]_57 chr13:67224120-67224620 1.6e-07 71_[+1]_12 chr6:37240130-37240630 1.6e-07 58_[+1]_25 chr5:10601227-10601727 1.8e-07 27_[+1]_56 chr1:153880943-153881443 1.8e-07 43_[-1]_40 chr7:128523180-128523680 1.8e-07 63_[+1]_20 chr8:13276305-13276805 1.8e-07 52_[-1]_31 chrX:39755607-39756107 2.1e-07 66_[+1]_17 chr1:12478147-12478647 2.1e-07 55_[-1]_28 chr12:29350004-29350504 2.1e-07 60_[-1]_23 chr5:73031870-73032370 2.3e-07 63_[+1]_20 chr17:1080693-1081193 2.3e-07 80_[-1]_3 chr8:30141564-30142064 2.3e-07 37_[-1]_46 chr3:61894982-61895482 2.6e-07 49_[-1]_34 chr1:235067771-235068271 3e-07 51_[-1]_32 chr1:80054126-80054626 3.3e-07 68_[-1]_15 chr17:73474227-73474727 3.3e-07 54_[-1]_29 chr19:41501316-41501816 3.7e-07 47_[-1]_36 chr5:125198493-125198993 3.7e-07 30_[-1]_53 chr17:46742759-46743259 3.7e-07 20_[+1]_63 chr1:31215941-31216441 4.1e-07 39_[+1]_44 chr5:32217734-32218234 4.1e-07 60_[-1]_23 chr6:53927177-53927677 4.5e-07 29_[+1]_54 chr15:89383546-89384046 4.5e-07 41_[-1]_42 chr17:29042484-29042984 4.5e-07 53_[+1]_30 chr10:21724680-21725180 5e-07 61_[-1]_22 chr12:56636711-56637211 5e-07 29_[-1]_54 chr1:232620479-232620979 5.5e-07 30_[-1]_53 chr19:1361997-1362497 5.5e-07 44_[-1]_39 chr21:34543871-34544371 5.5e-07 33_[+1]_50 chr6:118660158-118660658 6e-07 66_[+1]_17 chr10:18607480-18607980 6e-07 46_[+1]_37 chr7:132255818-132256318 6e-07 20_[+1]_63 chr15:70062307-70062807 7.2e-07 35_[-1]_48 chr1:43836442-43836942 7.2e-07 43_[-1]_40 chr5:81736013-81736513 7.2e-07 46_[+1]_37 chr17:80219346-80219846 8.6e-07 41_[-1]_42 chr9:129639988-129640488 9.4e-07 33_[+1]_50 chr5:37717519-37718019 1e-06 26_[+1]_57 chr17:58391416-58391916 1.1e-06 45_[-1]_38 chr1:203626482-203626982 1.1e-06 50_[-1]_33 chr5:142223565-142224065 1.1e-06 37_[-1]_46 chr3:169657311-169657811 1.3e-06 47_[-1]_36 chr1:21139519-21140019 1.6e-06 71_[-1]_12 chr8:16825905-16826405 1.6e-06 49_[+1]_34 chr19:11344360-11344860 1.6e-06 83_[-1] chr5:172437410-172437910 1.8e-06 44_[-1]_39 chr5:140295371-140295871 1.9e-06 53_[-1]_30 chr1:15886195-15886695 1.9e-06 11_[+1]_72 chr2:170530187-170530687 2.2e-06 18_[-1]_65 chr19:34218189-34218689 2.4e-06 71_[+1]_12 chr12:10721987-10722487 2.4e-06 60_[+1]_23 chr1:224204691-224205191 2.6e-06 68_[-1]_15 chr16:75305374-75305874 2.6e-06 75_[-1]_8 chr9:136109548-136110048 2.8e-06 83_[-1] chr1:229221448-229221948 3e-06 48_[+1]_35 chr1:234997177-234997677 3.4e-06 24_[-1]_59 chr5:139517839-139518339 3.4e-06 33_[-1]_50 chr1:230104614-230105114 3.7e-06 15_[+1]_68 chr1:234724153-234724653 3.9e-06 42_[-1]_41 chr17:28599396-28599896 4.5e-06 7_[+1]_76 chr17:15828724-15829224 6.7e-06 37_[+1]_46 chr17:20646677-20647177 6.7e-06 16_[+1]_67 chr1:155983348-155983848 1.1e-05 68_[-1]_15 chr9:11171-11671 2.7e-05 77_[-1]_6 chrX:78103807-78104307 4.3e-05 22_[+1]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTGGCASYKTGCCARR MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYTGGCASYKTGCCARR width=17 seqs=101 chr19:48539554-48540054 ( 57) CTTGGCACTGTGCCAGG 1 chr1:234977852-234978352 ( 35) CTTGGCACTGTGCCAGG 1 chr12:120646956-12064745 ( 68) CTTGGCACTGTGCCAAG 1 chr6:31777110-31777610 ( 61) CCTGGCACTGTGCCAGG 1 chr1:181127031-181127531 ( 48) CTTGGCACAGTGCCAGG 1 chr14:95291759-95292259 ( 39) CCTGGCACTGTGCCAAG 1 chr2:165825020-165825520 ( 32) TTTGGCACTGTGCCAAG 1 chr12:121404691-12140519 ( 30) CCTGGCACTGTGCCAGA 1 chr5:41747193-41747693 ( 40) GTTGGCACTGTGCCAAG 1 chr5:10288461-10288961 ( 27) CCTGGCACCGGGCCAAG 1 chr17:40314533-40315033 ( 18) CCTGGCACCTTGCCAGC 1 chrX:13647559-13648059 ( 31) CCTGGCAGCATGCCAGG 1 chr16:29943427-29943927 ( 26) CTTGGCAGCTGGCCAAG 1 chr13:112849465-11284996 ( 43) TTTGGCTGTGTGCCAGG 1 chr21:29277386-29277886 ( 43) TTTGGCACTTTGCCAAA 1 chr1:110176232-110176732 ( 26) CTTGGCTCCATGCCAGA 1 chr15:74546102-74546602 ( 68) CTTGGCAGCTGGCCAGC 1 chr17:21040149-21040649 ( 75) GTTGGCAGTGTGCCAGC 1 chr16:1271747-1272247 ( 23) GTTGGCACCCTGCCAGC 1 chr1:234523521-234524021 ( 50) CCTGGCAGCCTGCCAGC 1 chr2:178484603-178485103 ( 49) CTTGGCTCCATGCCAAA 1 chr6:40882271-40882771 ( 77) CCTGGCAGCGGGCCAGC 1 chr1:230145424-230145924 ( 31) ATTGGCACTATGCCAAG 1 chr5:145975508-145976008 ( 18) TTTGGCTCTCTGCCAAG 1 chr1:44327756-44328256 ( 20) CCTGGCTCCTGGCCAAG 1 chr5:109468677-109469177 ( 35) GTTGGCTCCCTGCCAAG 1 chr2:227818167-227818667 ( 46) CTGGGCACCGTGCCAAG 1 chr18:48901926-48902426 ( 18) CTTGGCCCCGGGCCAGG 1 chr1:221284028-221284528 ( 50) CTTGGCATTTTGCCAAC 1 chr10:87586164-87586664 ( 51) TTTGGCAGCCTGCCAAA 1 chr11:114159934-11416043 ( 30) CCTGGCTCCAGGCCAGG 1 chr21:16420024-16420524 ( 48) TTTGGCACTTGGCCAAA 1 chr12:8243257-8243757 ( 30) CTTGGCACATGGCCAGG 1 chr3:188348599-188349099 ( 28) GCTGGCAGCATGCCAGG 1 chr2:58042470-58042970 ( 33) CTTGGCTGTATGCCAAC 1 chr6:80132940-80133440 ( 27) GTTGGCATTGTGCCAGC 1 chr13:67224120-67224620 ( 72) ATTGGCACCTGGCCAGC 1 chr6:37240130-37240630 ( 59) CTTGGCTGTTGGCCAGA 1 chr5:10601227-10601727 ( 28) CCTGGCTGGGTGCCAAC 1 chr1:153880943-153881443 ( 44) GTTGGCATCATGCCAGG 1 chr7:128523180-128523680 ( 64) ACTGGCAGCATGCCAGG 1 chr8:13276305-13276805 ( 53) CTTGGCCGCGGGCCAGG 1 chrX:39755607-39756107 ( 67) CCTGGCACCCAGCCAGC 1 chr1:12478147-12478647 ( 56) CCTGGCATTGGGCCAGA 1 chr12:29350004-29350504 ( 61) TCTGGCTCTTTGCCAAA 1 chr5:73031870-73032370 ( 64) ACTGGCACTGAGCCAGG 1 chr17:1080693-1081193 ( 81) CCTGGCTTTCTGCCAGG 1 chr8:30141564-30142064 ( 38) CTTGGCACTGTGCCCGG 1 chr3:61894982-61895482 ( 50) CTTGGCTCCCAGCCAGA 1 chr1:235067771-235068271 ( 52) TTTGGCTCCCAGCCAGG 1 chr1:80054126-80054626 ( 69) ATTGGCTCCGAGCCAAG 1 chr17:73474227-73474727 ( 55) CTTGGCACGTGGCCAGT 1 chr19:41501316-41501816 ( 48) TTTGGCTCTCTGCCAAT 1 chr5:125198493-125198993 ( 31) GTTGGCTGCCTGCCAAA 1 chr17:46742759-46743259 ( 21) CTTGGCTCTGAGCCAAT 1 chr1:31215941-31216441 ( 40) CCTGGCCCTGGGCCAGA 1 chr5:32217734-32218234 ( 61) TTTGGCTGCTGGCCAAA 1 chr6:53927177-53927677 ( 30) TCTGGCAGTAGGCCAGA 1 chr15:89383546-89384046 ( 42) GCTGGCTCTGAGCCAAG 1 chr17:29042484-29042984 ( 54) CTGGGCATCGTGCCAAG 1 chr10:21724680-21725180 ( 62) TTTGGCAGCAAGCCAGC 1 chr12:56636711-56637211 ( 30) TTTGGCGCGGGGCCAGG 1 chr1:232620479-232620979 ( 31) ACTGGCAGTTTGCCAGT 1 chr19:1361997-1362497 ( 45) ACTGGCACTCTGCCAAT 1 chr21:34543871-34544371 ( 34) CTTGGCAACTTGCCAGA 1 chr6:118660158-118660658 ( 67) GTTGGCAGATTGCCAGA 1 chr10:18607480-18607980 ( 47) ATTGGCATGGGGCCAAG 1 chr7:132255818-132256318 ( 21) GCTGGCTCCTAGCCAAG 1 chr15:70062307-70062807 ( 36) TTTGGCCGCCTGCCAGC 1 chr1:43836442-43836942 ( 44) CCTGGCTGGCTGCCAGT 1 chr5:81736013-81736513 ( 47) ATTGGCGCTATGCCAAA 1 chr17:80219346-80219846 ( 42) TCTGGCGCCCTGCCAGT 1 chr9:129639988-129640488 ( 34) CTGGGCACAGTGCCAGC 1 chr5:37717519-37718019 ( 27) TTTGGCAGGTAGCCAGC 1 chr17:58391416-58391916 ( 46) TCGGGCACCTGGCCAAG 1 chr1:203626482-203626982 ( 51) CTTGGCGCGAGGCCAAA 1 chr5:142223565-142224065 ( 38) ATTGGCACCCAGCCAAT 1 chr3:169657311-169657811 ( 48) TCTGGCTTCTTGCCAAT 1 chr1:21139519-21140019 ( 72) TTTGGCTTGAGGCCAGG 1 chr8:16825905-16826405 ( 50) CTGGGCACCGTGCCACA 1 chr19:11344360-11344860 ( 84) CTGGGCCTGCTGCCAAG 1 chr5:172437410-172437910 ( 45) ATTGGCAGCCTGCCACC 1 chr5:140295371-140295871 ( 54) TTTGGCGTGTTGCCAGC 1 chr1:15886195-15886695 ( 12) GTTGGCTGCTTGCCACC 1 chr2:170530187-170530687 ( 19) CCTGGGAGCTGGCCAGG 1 chr19:34218189-34218689 ( 72) CCAGGCAGTTTGCCAAA 1 chr12:10721987-10722487 ( 61) GCTGGCATGTGGCCAAC 1 chr1:224204691-224205191 ( 69) GCTGGCGCAGAGCCAGG 1 chr16:75305374-75305874 ( 76) CTTGACGCTGTGCCAAG 1 chr9:136109548-136110048 ( 84) CTGGGCAGCGTGCCCGG 1 chr1:229221448-229221948 ( 49) TTTGGCAATAGGCCAAC 1 chr1:234997177-234997677 ( 25) TCTGGCGCTGTGCCATG 1 chr5:139517839-139518339 ( 34) CTTGGCCCCGGGCCGGA 1 chr1:230104614-230105114 ( 16) CCTGGGCCCTTGCCAGG 1 chr1:234724153-234724653 ( 43) TCTGGCGGGCAGCCAAG 1 chr17:28599396-28599896 ( 8) CCTGGCGCTATGCCGAA 1 chr17:15828724-15829224 ( 38) CTTGGTACAGGGCCAGT 1 chr17:20646677-20647177 ( 17) CTTGGTACAGGGCCAGT 1 chr1:155983348-155983848 ( 69) ATTGGCTTTAGGCCCAG 1 chr9:11171-11671 ( 78) GCAGGCGGCGTGCCACC 1 chrX:78103807-78104307 ( 23) GTTCGCGGCGTGCCGGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTGGCASYKTGCCARR MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 17 n= 50316 bayes= 10.1001 E= 1.0e-181 -107 98 -66 -13 -1330 55 -1330 134 -365 -1330 -185 187 -1330 -466 198 -1330 -465 -1330 198 -1330 -1330 194 -366 -365 115 -185 -107 4 -365 112 29 -96 -185 83 -107 55 -57 -41 63 4 -96 -1330 20 123 -1330 -1330 200 -1330 -1330 200 -1330 -1330 -1330 200 -1330 -1330 191 -307 -307 -1330 74 -266 109 -465 -13 -20 83 -120 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTGGCASYKTGCCARR MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 17 nsites= 101 E= 1.0e-181 0.118812 0.495050 0.158416 0.227723 0.000000 0.366337 0.000000 0.633663 0.019802 0.000000 0.069307 0.910891 0.000000 0.009901 0.990099 0.000000 0.009901 0.000000 0.990099 0.000000 0.000000 0.960396 0.019802 0.019802 0.554455 0.069307 0.118812 0.257426 0.019802 0.544554 0.306931 0.128713 0.069307 0.445545 0.118812 0.366337 0.168317 0.188119 0.386139 0.257426 0.128713 0.000000 0.287129 0.584158 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.940594 0.029703 0.029703 0.000000 0.415842 0.039604 0.534653 0.009901 0.227723 0.217822 0.445545 0.108911 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTGGCASYKTGCCARR MEME-1 regular expression -------------------------------------------------------------------------------- [CT][TC]TGGC[AT][CG][CT][GT][TG]GCCA[GA][GAC] -------------------------------------------------------------------------------- Time 731.18 secs. ******************************************************************************** ******************************************************************************** MOTIF RRACTATTTAWVAD MEME-2 width = 14 sites = 162 llr = 1581 E-value = 2.9e-130 ******************************************************************************** -------------------------------------------------------------------------------- Motif RRACTATTTAWVAD MEME-2 Description -------------------------------------------------------------------------------- Simplified A 3572:a:::94353 pos.-specific C 1::7::::::2311 probability G 432::::::11224 matrix T 21:1a:aaa:4222 bits 2.0 ** 1.8 ***** 1.6 ****** 1.4 ****** Relative 1.2 ****** Entropy 1.0 ******** (14.1 bits) 0.8 ******** 0.6 ******** 0.4 ********* 0.2 *********** * 0.0 -------------- Multilevel GAACTATTTAAAAG consensus AGG TCTA sequence G T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTATTTAWVAD MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------- chr11:46914239-46914739 + 50 7.45e-09 GCAGTCATCA GAACTATTTATAAG GTCAAACTCA chr3:194561280-194561780 + 25 3.73e-08 CTCCAGATCA AAACTATTTATAAG AATCATTTCC chr5:44808448-44808948 - 11 3.73e-08 CCTTTGCCAG GAACTATTTATAAA CATCCTGCAG chr6:25418680-25419180 - 35 5.59e-08 ACTCAAGCCA GAACTATTTATGAG ACAGATGAGA chr7:94446292-94446792 + 17 7.82e-08 CATTGCAGAT GGACTATTTAACAG TTCACGTAAT chr2:134919311-134919811 - 47 7.82e-08 GAGGGCCCTG GAACTATTTATCAA TGGCTACGAC chr20:32270580-32271080 - 58 1.15e-07 ACTGCAAAGG GAACTATTTATTAG AATGCAAGGA chr17:40108310-40108810 + 43 1.15e-07 TGGAATCAAT GGACTATTTAAAAA GAGACAGAAT chr8:37256709-37257209 - 52 2.09e-07 GCTAACTGGA GAACTATTTAATAA GATGATAATC chr1:197180308-197180808 - 67 2.09e-07 TCTTTTACTA TAACTATTTAACAG GTAGGGATCT chr1:214469215-214469715 - 29 2.09e-07 TCCAGGAGCC AGACTATTTAACAG AAAGGAGATG chr7:117135399-117135899 + 39 2.09e-07 GTGTTGGAAG GAACTATTTAATAA CAGCTGTTAT chr10:89267010-89267510 + 12 2.09e-07 atttgcaaac agactatttaacag ttgttgggca chr9:385822-386322 - 58 2.79e-07 CTACAGTTAA AAACTATTTAAGAA TCTGGGCTGC chr12:57846932-57847432 + 53 3.65e-07 ACCCCCTTCC CAACTATTTAAAAG GCCGCTCCGA chr10:5861247-5861747 - 49 3.65e-07 CCTTATGTTA GAACTATTTATATA AGTGGTAGTC chr8:38888113-38888613 + 8 3.65e-07 CCTGGAT GAACTATTTAAAGA ATATGCAGTT chr15:60255408-60255908 + 78 4.73e-07 TTTGGCAGCC TAACTATTTAACAA CTGATGATG chr1:46522108-46522608 + 22 6.00e-07 gactcactgt ggactatttaataa gctgctaggc chr11:65961996-65962496 - 22 6.00e-07 TCCCGTAGAA AGACTATTTAATAG AGCTGGTAAA chr2:221289295-221289795 - 57 6.00e-07 GGTCTCTCTC AAACTATTTACCAG ATTAGGCAAG chr11:85628101-85628601 - 48 7.53e-07 TTTCCTTCCC TGACTATTTATCAG CTTAGCTCCC chr1:151070353-151070853 - 16 7.53e-07 ATGCTAGGCA GGACTATTTAACGG GGCGGAGGAC chr17:27236696-27237196 - 50 7.53e-07 GACTATCATA AAACTATTTACAAA GCTAACTGGG chr1:223819689-223820189 - 15 9.42e-07 ACTAGAATGT AAACTATTTAAGGG TAGAGACCTT chr10:116891095-11689159 + 33 9.42e-07 CGCAACAGCT GGACTATTTAACAC AATCTGGTGA chrX:73913448-73913948 - 28 9.42e-07 ACGGGAAAGC TAACTATTTAAAGG CTATTCTGGG chr13:99145422-99145922 + 31 9.42e-07 actcagtaca ggactatttatata gttcgacaat chr8:140491598-140492098 - 27 9.42e-07 ACTTTGGAAG GAACTATTTATGTA AGTGCTTGTT chr15:99306096-99306596 + 75 9.42e-07 TGCAAATCCC TAACTATTTAAAGG AACTCGGCTA chr5:71830606-71831106 - 29 1.15e-06 GGCTCACTCA GGACTATTTATAGA GCTGGGTTGT chr1:223811646-223812146 + 76 1.15e-06 CACTATTGAG AGACTATTTAATAA TTTATCCAGT chr1:199490764-199491264 - 78 1.15e-06 TCATAAAAA TAACTATTTAACTG TTTCTGTCAA chr1:29133552-29134052 - 31 1.15e-06 ATCCCATTTC CAACTATTTAACAA GAGCTTACTA chr19:18349515-18350015 - 78 1.41e-06 AACAAAATG AAAATATTTAAAAG AATGAGTAAT chr10:68900799-68901299 + 73 1.41e-06 AAGATAAACC GAACTATTTATGTT AATCAGTGCA chr15:69146027-69146527 - 59 1.41e-06 TCCAAAAAGA GAACTATTTAAGGT AGGACCATCC chr22:40070668-40071168 - 48 1.41e-06 AACTGACATG AAACTATTTATAGT CTACCCACTT chr10:51170753-51171253 - 38 1.41e-06 TCTGCCTCTT TGACTATTTAATAG CTTTCTAGCT chr16:74996953-74997453 - 43 1.41e-06 GACTGCTGAA CAACTATTTATCAA GTGCTAGGTG chr5:143596003-143596503 - 25 1.70e-06 CATGCTAACA AAACTATTTACATG GAAATTAGGA chr19:30648363-30648863 - 33 1.70e-06 AATGTGAAAA GGACTATTTATGAC TCATACTCTG chr1:244655160-244655660 - 32 2.02e-06 TCTAATAATT CAACTATTTATCAT TCCGATAAAC chr5:175809746-175810246 + 20 2.39e-06 ATCCAGATGG GAGCTATTTATGAT GCTGAGTCAT chr5:61328038-61328538 + 19 2.39e-06 GCTACTGGGA GTACTATTTATGAA GTGGGCCAGG chr10:113524488-11352498 - 38 2.39e-06 AAGCTGAGGC AAGCTATTTAACAT CTCTGAGCAT chr12:1605792-1606292 - 9 2.39e-06 CTTGTCTTTT GAAATATTTATCAA CATGCGAA chr15:38354223-38354723 - 12 2.81e-06 GAAGCCAAGA GAAATATTTAAGAA TTATCAATTC chr8:26151267-26151767 + 54 2.81e-06 GCTAAAAGGT CAACTATTTATTAA GGTGGAGCAA chr10:21919161-21919661 + 61 2.81e-06 CCTGCTGTGT GAACTATTTAAACC CTTTATTCCT chr1:109149163-109149663 + 42 2.81e-06 GAGAGCTACT GAACTATTTAATCA TCTTAGCAGG chr13:112102298-11210279 + 46 3.29e-06 ATCCACCAGG GGACTATTTATAGC ACAGAGCAGC chr7:99751548-99752048 - 15 3.29e-06 GTCATACACA GAACTATTTACCTT GCAATGATTA chr7:99699102-99699602 - 1 3.29e-06 GTCATACACA GAACTATTTACCTT chr3:20083198-20083698 - 38 3.29e-06 CTGCAAAGCT AAACTATTTACTAT ACTGACAATC chr10:7433235-7433735 + 66 3.29e-06 ATTATGTTGC TGACTATTTAATAT TATGTTTAGC chr17:78974979-78975479 - 71 3.80e-06 AACAATCCAT AAACTATTTAGCAG CAGGGATAGT chr10:63267226-63267726 - 37 3.80e-06 CTAGACCCAT GAACTATTTACTAC AAATTTCATC chr20:1430074-1430574 - 41 3.80e-06 GTCCCATGAC ATACTATTTACAAG CTGAAGAACC chr6:155177323-155177823 - 47 4.39e-06 TGGAAACTTA AAACTATTTAAGCT CTACTGCACC chr19:50388494-50388994 + 70 4.39e-06 ttttttggct gaactatttgaaag ttgtggtcat chr5:41788974-41789474 + 46 4.39e-06 gtttctatcc taactatttaaagc agccataaac chr5:113217731-113218231 - 81 4.39e-06 TAAACT AAACTATTTACAGT GTCTGGTCAG chr10:101438722-10143922 + 13 5.04e-06 ATGTGCCTAT GGACTATTTACAGT GAGATTATAA chr17:20646677-20647177 + 74 5.04e-06 GCAGGAAAGA GAAATATTTAAGTG CGTGCAGATT chr1:84604285-84604785 + 6 5.04e-06 ctgaa agactatttaactc ctaatgatag chr1:41003464-41003964 - 6 5.04e-06 GCACTACTAG AGACTATTTACATA CATTA chr8:120859583-120860083 + 78 5.74e-06 TCTGTGTTTT CAACTATTTAATAC CTAGCACCT chr7:105026679-105027179 - 24 5.74e-06 AATCCTTAAT GAACTATTTACTTT AGGAGGTAAG chr7:7681456-7681956 + 47 5.74e-06 TAGCCTTATA CTACTATTTAAAAA TCCAGCAAGC chr5:88824872-88825372 + 62 6.52e-06 GCCAATGTCC TGGCTATTTAATAG ATTGTTTGGC chr3:14125641-14126141 + 40 7.37e-06 CTTTCTCGGG AAACTATTTAAGCC CAACATTCAT chr19:30394410-30394910 - 47 7.37e-06 TTTCCAGACT GTACTATTTACAGG TGGGGCAAAC chr17:44021163-44021663 - 61 7.37e-06 TTTTCTTGAC AGACTATTTAATCA GCAGGCAGAT chr5:66757140-66757640 - 27 8.31e-06 TCCATAACAG CTACTATTTAATAG TCCTAGTAAA chr4:53011921-53012421 - 17 9.33e-06 TTGAACCTGA AAACTATTTAGGAT CCATTGACCC chr11:106078021-10607852 - 63 9.33e-06 GGAGAATGAT GGGATATTTAACAG GCAGAATAAG chr1:212488389-212488889 + 8 1.16e-05 TCCAGGT TTACTATTTACCAA AAACAAACAA chr7:23418071-23418571 - 44 1.16e-05 GCATAAACAC AAACTATTTAGCAC AATTGAATAG chr3:107443410-107443910 + 43 1.16e-05 ATAGGAGCTA TGActatttacagt tctactggga chr6:41767149-41767649 - 57 1.16e-05 AGGGCCTTGT CGAATATTTATCAG GCCTCACTGG chr17:7822581-7823081 - 27 1.16e-05 ACAGAAGCAC AAACTATTTACTCA TTCATTCACT chr5:124706624-124707124 + 55 1.29e-05 AGCAGTAGCC TGGCTATTTATCAC GCGAGAGAGC chr14:34081775-34082275 + 59 1.43e-05 GGCAGTAATA TGGCTATTTATATT CAGAGCCTGA chr12:106779894-10678039 + 39 1.43e-05 TTTACATCGC AGGCTATTTATGTT AGaggagcct chr1:229221077-229221577 + 46 1.58e-05 AGTCTTCCCA AGGCTATTTATACT GCGTCATCTT chr1:209884518-209885018 - 22 1.58e-05 TAAAGAAACT ACACTATTTAACAG TCTAGGAATT chr17:7514636-7515136 - 35 1.58e-05 ACACTTTTCC AAATTATTTATGAC AATCAGTAAA chr13:75437561-75438061 + 78 1.58e-05 tgttcactgt gaactatttgaaga tgcattaac chr1:34763451-34763951 - 69 1.74e-05 TCCCCCAAGC AGACTATTTACTCA TCTAACAAGC chr3:55692915-55693415 + 7 1.74e-05 CAAGGA TTACTATTTATATC CACAGACAGA chr10:114208330-11420883 + 82 1.74e-05 GCACCCTCTT GTGCTATTTATGAC ACTGT chr10:75622452-75622952 + 60 1.74e-05 GAGAAAGAAC AAACTATTTGACTG ATGGTTTGCT chr14:65472189-65472689 + 74 1.74e-05 gcaTAGACTC AGGCTATTTACTAT TCTGTTTTCA chr6:6467240-6467740 + 21 1.74e-05 CTCTGGGCGA TGAATATTTAACAC ATGGGTCAGC chr1:221284028-221284528 - 24 1.74e-05 CCCACAACAA AGGATATTTATGAG ACAGACTCAT chr12:111819779-11182027 - 52 1.91e-05 AAAGCTCATG CAGCTATTTATGGA CCTAAACATA chr5:93607813-93608313 + 50 1.91e-05 CCGTTGTTCT GAACTATTTGTGGG CATTTGATCA chrX:13647559-13648059 - 15 1.91e-05 CTGCCAGGAG GGCCTATTTATCAA CAGTGACAAT chr6:82331288-82331788 - 12 1.91e-05 AAATCCCTTC AGGCTATTTACATT TGTGGGAGAG chr12:53501377-53501877 - 51 2.10e-05 GGCCAACCCC AAACTATTTAGAGC TGGAGGCAGC chr5:88516519-88517019 - 9 2.10e-05 AAGGGGACCA GTAATATTTATGTG AATGAAGG chr4:38620878-38621378 + 38 2.30e-05 TGAAAACACG TAATTATTTAACTT GCCTTCTAAA chr12:54039773-54040273 - 61 2.30e-05 AAACTGAGGC AAACTATTTGAGGG GAAGGAGAAT chr5:122067233-122067733 - 33 2.30e-05 CTTTTCCTGC CAGATATTTAAGAG CATTCTGTTG chr1:30811134-30811634 - 49 2.30e-05 CTTAAAGTTC TGAATATTTACTAG ATGGGGACAT chr1:234974976-234975476 + 45 2.30e-05 AGATAATGGG GTGATATTTATCAG TGGCTGAATC chr2:169569890-169570390 - 45 2.30e-05 CAACCTTCAG GGGTTATTTAAATG GCTGTAAATA chrX:150325312-150325812 - 3 2.51e-05 ATGCTGATGG AGACTATTTAGACA AA chr16:48499981-48500481 + 21 2.51e-05 ATAACCTCTA AAACCATTTAAGAG CTTTTTAGCA chr10:22912389-22912889 - 80 2.51e-05 CCACACT GTGTTATTTAAAAG TTATCTGCTT chr7:104932218-104932718 - 69 2.98e-05 GATGGGGAGA GAACTATTGAACAG GCTGGGATAT chr17:28599396-28599896 - 76 2.98e-05 GTCACAAATG GGGATATTTATAGT ATTTCTCACT chr5:50668042-50668542 - 34 2.98e-05 TCCCCTCCTC CTGCTATTTAAAAC CGAGGGACGT chr5:154461401-154461901 + 41 2.98e-05 CAGTAGAGTc ttgctatttaaagt tggtccatca chr12:49832858-49833358 - 43 2.98e-05 CTGAGCTTCA GAATTATTTATCCC ACAGCCTACA chr4:55378763-55379263 + 34 2.98e-05 aagacaaaag aaactattttaaag gaaggggaat chr7:114481939-114482439 + 16 3.24e-05 ACTTGTTGTG CTACTATTTATGCA TTGTGATATC chr9:18394811-18395311 - 42 3.24e-05 CCTGAAAAAT GCACTATTTACCAA GTTGGGACAT chr12:69476176-69476676 - 49 3.24e-05 TGTCAAAGGC GAGTTATTTATCTT GTTGGCTAAT chr7:129332673-129333173 + 53 3.52e-05 TCTGTTTATT TGGCTATTTAGAAT ATGATGACTA chr1:115668990-115669490 + 79 3.52e-05 CCCATTCTAT AGGATATTTATATT GCTGAAGC chr1:226102929-226103429 + 60 3.81e-05 tggaaagcag ttgctatttacagg cacgatcatc chr17:58391416-58391916 + 3 4.13e-05 TT GAACTGTTTACAGG CTGAGTTAAC chr1:21139519-21140019 + 28 4.13e-05 tagagtgcag tggctatttacagc cacgatcatc chr5:62233352-62233852 - 12 4.13e-05 GTCCTCTCTG CTGCTATTTATGGG CTTCCCAGTT chr8:42457990-42458490 + 41 4.13e-05 AACATGTACA GAAATGTTTAACAG AATGCTACTA chr17:70661149-70661649 + 14 4.45e-05 CCACATGCCC GACCTATTTATCCT TTCTGTGGCT chr1:202222297-202222797 + 69 4.45e-05 ATGCACAGGG TAAATATTTAGAGG TAATCATTTT chr7:101882943-101883443 + 80 4.82e-05 TTAAAAAATG AAGTTATTTATGTT ATGGGGT chr7:69609969-69610469 - 31 5.18e-05 TCAGTCGCAT GTGTTATTTATAGG ACAGCGTATC chr6:27505535-27506035 + 59 5.18e-05 AATTAGAAGG AAACTATTTGGGAG AAGTCAGGCT chr1:164787638-164788138 - 53 5.59e-05 TGCGCCCATG AAGATATTTAACCC ATTTGGTAAT chr6:28747607-28748107 + 9 5.59e-05 gttcaggc gAAATATTTGTGTG TTTTACTCTA chr8:37229054-37229554 - 68 6.00e-05 TAAGCAAATA AGAATATTTGATAG GCTTGAAAGG chr8:133381828-133382328 + 20 6.00e-05 atttcctacg tgactgtttatctg tcaggatcag chr10:6669253-6669753 - 62 6.00e-05 ACCATATAAT GGACTATTTGCGGA TGACTTGAAT chr13:45194225-45194725 - 10 6.00e-05 TCAACGTTGG TGGATATTTATACA TTACTCAAA chr15:33126616-33127116 - 53 6.46e-05 TATACAGCCA CAGTTATTTATGGG TATCAGTTTT chr8:93846755-93847255 - 79 6.46e-05 GTCTACTG GTGCTGTTTAAAAG TTGTCTAATC chr1:212291404-212291904 + 56 6.92e-05 GCTTCACCTC CTGCTATTTACATT TCACTCTCTT chr1:173714639-173715139 + 64 6.92e-05 GTTCCTGCGG GAACGATTTAAGAA TAGGACTACT chr8:10152240-10152740 + 73 6.92e-05 GATTTCAGGA TGGATATTTAGAAG CTTCAGCTAA chr3:177478301-177478801 + 86 7.43e-05 TGCTTTTACT TGATTATTTACACT G chr11:126060729-12606122 + 18 7.43e-05 TTGAGAGTCA GAGCTGTTTAAGTA CTTTGCACAG chr21:37032889-37033389 - 41 7.43e-05 CATCACAAAG TACCTATTTATGCA TTGGCCTTTC chr5:91314204-91314704 - 19 7.43e-05 CCTGCTCTGG CAGTTATTTAAACA GAAGGCTCCA chr10:6141072-6141572 - 22 8.53e-05 TCAATCTGCT GGACTATTGATGTG AGCACTGCTG chr1:109438736-109439236 + 78 9.12e-05 tgcttcttag gaactatttttagc cagtgacta chr1:227563165-227563665 - 25 9.77e-05 GGGTTGAATG AGACTATTAACAAA ATGGGCAATT chr1:77412411-77412911 - 42 1.12e-04 CCATGGATAT GACTTATTTATTGG GTGAGTCATC chr3:169657311-169657811 - 16 1.19e-04 ATGTCAACAT TGAATATTTGAATT CCCAGACTCT chr1:226268747-226269247 + 69 1.19e-04 AACTGTGTCA CTATTATTTAAGTC CAGCCTAAAA chr5:150319893-150320393 + 28 1.27e-04 gcgtgcttca ctgttatttaatat ggtttagcta chr17:21040149-21040649 - 18 1.27e-04 TGACTGGGGG GACTTATTTACCTG TATCACTTCA chr22:32473225-32473725 + 43 1.27e-04 aggcaatcaa tacatatttattTG CAGAATCAAG chr5:399675-400175 - 45 1.35e-04 GCTGAATAAC TGGCTGTTTATAGA TCCCACAAAC chr10:84361012-84361512 - 83 1.35e-04 AGAC GGGACATTTAACAG TTTCACTTTT chr1:234700197-234700697 + 13 1.44e-04 TGACTCAGAG GCATTATTTATTAC TGTTATTTTT chr4:185095932-185096432 + 15 1.53e-04 CAATAGCTGT AAACTATTAATTCA TTTGGCAATC chr7:130072159-130072659 + 58 1.96e-04 AGACCAAGAA CAGCCATTTATCCG GAGGTAAAGA chr14_GL000225v1_random: + 45 2.33e-04 cccaggtgat gtaacatttatcta ggctctgcct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTATTTAWVAD MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:46914239-46914739 7.5e-09 49_[+2]_37 chr3:194561280-194561780 3.7e-08 24_[+2]_62 chr5:44808448-44808948 3.7e-08 10_[-2]_76 chr6:25418680-25419180 5.6e-08 34_[-2]_52 chr7:94446292-94446792 7.8e-08 16_[+2]_70 chr2:134919311-134919811 7.8e-08 46_[-2]_40 chr20:32270580-32271080 1.2e-07 57_[-2]_29 chr17:40108310-40108810 1.2e-07 42_[+2]_44 chr8:37256709-37257209 2.1e-07 51_[-2]_35 chr1:197180308-197180808 2.1e-07 66_[-2]_20 chr1:214469215-214469715 2.1e-07 28_[-2]_58 chr7:117135399-117135899 2.1e-07 38_[+2]_48 chr10:89267010-89267510 2.1e-07 11_[+2]_75 chr9:385822-386322 2.8e-07 57_[-2]_29 chr12:57846932-57847432 3.7e-07 52_[+2]_34 chr10:5861247-5861747 3.7e-07 48_[-2]_38 chr8:38888113-38888613 3.7e-07 7_[+2]_79 chr15:60255408-60255908 4.7e-07 77_[+2]_9 chr1:46522108-46522608 6e-07 21_[+2]_65 chr11:65961996-65962496 6e-07 21_[-2]_65 chr2:221289295-221289795 6e-07 56_[-2]_30 chr11:85628101-85628601 7.5e-07 47_[-2]_39 chr1:151070353-151070853 7.5e-07 15_[-2]_71 chr17:27236696-27237196 7.5e-07 49_[-2]_37 chr1:223819689-223820189 9.4e-07 14_[-2]_72 chr10:116891095-11689159 9.4e-07 32_[+2]_54 chrX:73913448-73913948 9.4e-07 27_[-2]_59 chr13:99145422-99145922 9.4e-07 30_[+2]_56 chr8:140491598-140492098 9.4e-07 26_[-2]_60 chr15:99306096-99306596 9.4e-07 74_[+2]_12 chr5:71830606-71831106 1.1e-06 28_[-2]_58 chr1:223811646-223812146 1.1e-06 75_[+2]_11 chr1:199490764-199491264 1.1e-06 77_[-2]_9 chr1:29133552-29134052 1.1e-06 30_[-2]_56 chr19:18349515-18350015 1.4e-06 77_[-2]_9 chr10:68900799-68901299 1.4e-06 72_[+2]_14 chr15:69146027-69146527 1.4e-06 58_[-2]_28 chr22:40070668-40071168 1.4e-06 47_[-2]_39 chr10:51170753-51171253 1.4e-06 37_[-2]_49 chr16:74996953-74997453 1.4e-06 42_[-2]_44 chr5:143596003-143596503 1.7e-06 24_[-2]_62 chr19:30648363-30648863 1.7e-06 32_[-2]_54 chr1:244655160-244655660 2e-06 31_[-2]_55 chr5:175809746-175810246 2.4e-06 19_[+2]_67 chr5:61328038-61328538 2.4e-06 18_[+2]_68 chr10:113524488-11352498 2.4e-06 37_[-2]_49 chr12:1605792-1606292 2.4e-06 8_[-2]_78 chr15:38354223-38354723 2.8e-06 11_[-2]_75 chr8:26151267-26151767 2.8e-06 53_[+2]_33 chr10:21919161-21919661 2.8e-06 60_[+2]_26 chr1:109149163-109149663 2.8e-06 41_[+2]_45 chr13:112102298-11210279 3.3e-06 45_[+2]_41 chr7:99751548-99752048 3.3e-06 14_[-2]_72 chr7:99699102-99699602 3.3e-06 [-2]_86 chr3:20083198-20083698 3.3e-06 37_[-2]_49 chr10:7433235-7433735 3.3e-06 65_[+2]_21 chr17:78974979-78975479 3.8e-06 70_[-2]_16 chr10:63267226-63267726 3.8e-06 36_[-2]_50 chr20:1430074-1430574 3.8e-06 40_[-2]_46 chr6:155177323-155177823 4.4e-06 46_[-2]_40 chr19:50388494-50388994 4.4e-06 69_[+2]_17 chr5:41788974-41789474 4.4e-06 45_[+2]_41 chr5:113217731-113218231 4.4e-06 80_[-2]_6 chr10:101438722-10143922 5e-06 12_[+2]_74 chr17:20646677-20647177 5e-06 73_[+2]_13 chr1:84604285-84604785 5e-06 5_[+2]_81 chr1:41003464-41003964 5e-06 5_[-2]_81 chr8:120859583-120860083 5.7e-06 77_[+2]_9 chr7:105026679-105027179 5.7e-06 23_[-2]_63 chr7:7681456-7681956 5.7e-06 46_[+2]_40 chr5:88824872-88825372 6.5e-06 61_[+2]_25 chr3:14125641-14126141 7.4e-06 39_[+2]_47 chr19:30394410-30394910 7.4e-06 46_[-2]_40 chr17:44021163-44021663 7.4e-06 60_[-2]_26 chr5:66757140-66757640 8.3e-06 26_[-2]_60 chr4:53011921-53012421 9.3e-06 16_[-2]_70 chr11:106078021-10607852 9.3e-06 62_[-2]_24 chr1:212488389-212488889 1.2e-05 7_[+2]_79 chr7:23418071-23418571 1.2e-05 43_[-2]_43 chr3:107443410-107443910 1.2e-05 42_[+2]_44 chr6:41767149-41767649 1.2e-05 56_[-2]_30 chr17:7822581-7823081 1.2e-05 26_[-2]_60 chr5:124706624-124707124 1.3e-05 54_[+2]_32 chr14:34081775-34082275 1.4e-05 58_[+2]_28 chr12:106779894-10678039 1.4e-05 38_[+2]_48 chr1:229221077-229221577 1.6e-05 45_[+2]_41 chr1:209884518-209885018 1.6e-05 21_[-2]_65 chr17:7514636-7515136 1.6e-05 34_[-2]_52 chr13:75437561-75438061 1.6e-05 77_[+2]_9 chr1:34763451-34763951 1.7e-05 68_[-2]_18 chr3:55692915-55693415 1.7e-05 6_[+2]_80 chr10:114208330-11420883 1.7e-05 81_[+2]_5 chr10:75622452-75622952 1.7e-05 59_[+2]_27 chr14:65472189-65472689 1.7e-05 73_[+2]_13 chr6:6467240-6467740 1.7e-05 20_[+2]_66 chr1:221284028-221284528 1.7e-05 23_[-2]_63 chr12:111819779-11182027 1.9e-05 51_[-2]_35 chr5:93607813-93608313 1.9e-05 49_[+2]_37 chrX:13647559-13648059 1.9e-05 14_[-2]_72 chr6:82331288-82331788 1.9e-05 11_[-2]_75 chr12:53501377-53501877 2.1e-05 50_[-2]_36 chr5:88516519-88517019 2.1e-05 8_[-2]_78 chr4:38620878-38621378 2.3e-05 37_[+2]_49 chr12:54039773-54040273 2.3e-05 60_[-2]_26 chr5:122067233-122067733 2.3e-05 32_[-2]_54 chr1:30811134-30811634 2.3e-05 48_[-2]_38 chr1:234974976-234975476 2.3e-05 44_[+2]_42 chr2:169569890-169570390 2.3e-05 44_[-2]_42 chrX:150325312-150325812 2.5e-05 2_[-2]_84 chr16:48499981-48500481 2.5e-05 20_[+2]_66 chr10:22912389-22912889 2.5e-05 79_[-2]_7 chr7:104932218-104932718 3e-05 68_[-2]_18 chr17:28599396-28599896 3e-05 75_[-2]_11 chr5:50668042-50668542 3e-05 33_[-2]_53 chr5:154461401-154461901 3e-05 40_[+2]_46 chr12:49832858-49833358 3e-05 42_[-2]_44 chr4:55378763-55379263 3e-05 33_[+2]_53 chr7:114481939-114482439 3.2e-05 15_[+2]_71 chr9:18394811-18395311 3.2e-05 41_[-2]_45 chr12:69476176-69476676 3.2e-05 48_[-2]_38 chr7:129332673-129333173 3.5e-05 52_[+2]_34 chr1:115668990-115669490 3.5e-05 78_[+2]_8 chr1:226102929-226103429 3.8e-05 59_[+2]_27 chr17:58391416-58391916 4.1e-05 2_[+2]_84 chr1:21139519-21140019 4.1e-05 27_[+2]_59 chr5:62233352-62233852 4.1e-05 11_[-2]_75 chr8:42457990-42458490 4.1e-05 40_[+2]_46 chr17:70661149-70661649 4.5e-05 13_[+2]_73 chr1:202222297-202222797 4.5e-05 68_[+2]_18 chr7:101882943-101883443 4.8e-05 79_[+2]_7 chr7:69609969-69610469 5.2e-05 30_[-2]_56 chr6:27505535-27506035 5.2e-05 58_[+2]_28 chr1:164787638-164788138 5.6e-05 52_[-2]_34 chr6:28747607-28748107 5.6e-05 8_[+2]_78 chr8:37229054-37229554 6e-05 67_[-2]_19 chr8:133381828-133382328 6e-05 19_[+2]_67 chr10:6669253-6669753 6e-05 61_[-2]_25 chr13:45194225-45194725 6e-05 9_[-2]_77 chr15:33126616-33127116 6.5e-05 52_[-2]_34 chr8:93846755-93847255 6.5e-05 78_[-2]_8 chr1:212291404-212291904 6.9e-05 55_[+2]_31 chr1:173714639-173715139 6.9e-05 63_[+2]_23 chr8:10152240-10152740 6.9e-05 72_[+2]_14 chr3:177478301-177478801 7.4e-05 85_[+2]_1 chr11:126060729-12606122 7.4e-05 17_[+2]_69 chr21:37032889-37033389 7.4e-05 40_[-2]_46 chr5:91314204-91314704 7.4e-05 18_[-2]_68 chr10:6141072-6141572 8.5e-05 21_[-2]_65 chr1:109438736-109439236 9.1e-05 77_[+2]_9 chr1:227563165-227563665 9.8e-05 24_[-2]_62 chr1:77412411-77412911 0.00011 41_[-2]_45 chr3:169657311-169657811 0.00012 15_[-2]_71 chr1:226268747-226269247 0.00012 68_[+2]_18 chr5:150319893-150320393 0.00013 27_[+2]_59 chr17:21040149-21040649 0.00013 17_[-2]_69 chr22:32473225-32473725 0.00013 42_[+2]_44 chr5:399675-400175 0.00014 44_[-2]_42 chr10:84361012-84361512 0.00014 82_[-2]_4 chr1:234700197-234700697 0.00014 12_[+2]_74 chr4:185095932-185096432 0.00015 14_[+2]_72 chr7:130072159-130072659 0.0002 57_[+2]_29 chr14_GL000225v1_random: 0.00023 44_[+2]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTATTTAWVAD MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RRACTATTTAWVAD width=14 seqs=162 chr11:46914239-46914739 ( 50) GAACTATTTATAAG 1 chr3:194561280-194561780 ( 25) AAACTATTTATAAG 1 chr5:44808448-44808948 ( 11) GAACTATTTATAAA 1 chr6:25418680-25419180 ( 35) GAACTATTTATGAG 1 chr7:94446292-94446792 ( 17) GGACTATTTAACAG 1 chr2:134919311-134919811 ( 47) GAACTATTTATCAA 1 chr20:32270580-32271080 ( 58) GAACTATTTATTAG 1 chr17:40108310-40108810 ( 43) GGACTATTTAAAAA 1 chr8:37256709-37257209 ( 52) GAACTATTTAATAA 1 chr1:197180308-197180808 ( 67) TAACTATTTAACAG 1 chr1:214469215-214469715 ( 29) AGACTATTTAACAG 1 chr7:117135399-117135899 ( 39) GAACTATTTAATAA 1 chr10:89267010-89267510 ( 12) AGACTATTTAACAG 1 chr9:385822-386322 ( 58) AAACTATTTAAGAA 1 chr12:57846932-57847432 ( 53) CAACTATTTAAAAG 1 chr10:5861247-5861747 ( 49) GAACTATTTATATA 1 chr8:38888113-38888613 ( 8) GAACTATTTAAAGA 1 chr15:60255408-60255908 ( 78) TAACTATTTAACAA 1 chr1:46522108-46522608 ( 22) GGACTATTTAATAA 1 chr11:65961996-65962496 ( 22) AGACTATTTAATAG 1 chr2:221289295-221289795 ( 57) AAACTATTTACCAG 1 chr11:85628101-85628601 ( 48) TGACTATTTATCAG 1 chr1:151070353-151070853 ( 16) GGACTATTTAACGG 1 chr17:27236696-27237196 ( 50) AAACTATTTACAAA 1 chr1:223819689-223820189 ( 15) AAACTATTTAAGGG 1 chr10:116891095-11689159 ( 33) GGACTATTTAACAC 1 chrX:73913448-73913948 ( 28) TAACTATTTAAAGG 1 chr13:99145422-99145922 ( 31) GGACTATTTATATA 1 chr8:140491598-140492098 ( 27) GAACTATTTATGTA 1 chr15:99306096-99306596 ( 75) TAACTATTTAAAGG 1 chr5:71830606-71831106 ( 29) GGACTATTTATAGA 1 chr1:223811646-223812146 ( 76) AGACTATTTAATAA 1 chr1:199490764-199491264 ( 78) TAACTATTTAACTG 1 chr1:29133552-29134052 ( 31) CAACTATTTAACAA 1 chr19:18349515-18350015 ( 78) AAAATATTTAAAAG 1 chr10:68900799-68901299 ( 73) GAACTATTTATGTT 1 chr15:69146027-69146527 ( 59) GAACTATTTAAGGT 1 chr22:40070668-40071168 ( 48) AAACTATTTATAGT 1 chr10:51170753-51171253 ( 38) TGACTATTTAATAG 1 chr16:74996953-74997453 ( 43) CAACTATTTATCAA 1 chr5:143596003-143596503 ( 25) AAACTATTTACATG 1 chr19:30648363-30648863 ( 33) GGACTATTTATGAC 1 chr1:244655160-244655660 ( 32) CAACTATTTATCAT 1 chr5:175809746-175810246 ( 20) GAGCTATTTATGAT 1 chr5:61328038-61328538 ( 19) GTACTATTTATGAA 1 chr10:113524488-11352498 ( 38) AAGCTATTTAACAT 1 chr12:1605792-1606292 ( 9) GAAATATTTATCAA 1 chr15:38354223-38354723 ( 12) GAAATATTTAAGAA 1 chr8:26151267-26151767 ( 54) CAACTATTTATTAA 1 chr10:21919161-21919661 ( 61) GAACTATTTAAACC 1 chr1:109149163-109149663 ( 42) GAACTATTTAATCA 1 chr13:112102298-11210279 ( 46) GGACTATTTATAGC 1 chr7:99751548-99752048 ( 15) GAACTATTTACCTT 1 chr7:99699102-99699602 ( 1) GAACTATTTACCTT 1 chr3:20083198-20083698 ( 38) AAACTATTTACTAT 1 chr10:7433235-7433735 ( 66) TGACTATTTAATAT 1 chr17:78974979-78975479 ( 71) AAACTATTTAGCAG 1 chr10:63267226-63267726 ( 37) GAACTATTTACTAC 1 chr20:1430074-1430574 ( 41) ATACTATTTACAAG 1 chr6:155177323-155177823 ( 47) AAACTATTTAAGCT 1 chr19:50388494-50388994 ( 70) GAACTATTTGAAAG 1 chr5:41788974-41789474 ( 46) TAACTATTTAAAGC 1 chr5:113217731-113218231 ( 81) AAACTATTTACAGT 1 chr10:101438722-10143922 ( 13) GGACTATTTACAGT 1 chr17:20646677-20647177 ( 74) GAAATATTTAAGTG 1 chr1:84604285-84604785 ( 6) AGACTATTTAACTC 1 chr1:41003464-41003964 ( 6) AGACTATTTACATA 1 chr8:120859583-120860083 ( 78) CAACTATTTAATAC 1 chr7:105026679-105027179 ( 24) GAACTATTTACTTT 1 chr7:7681456-7681956 ( 47) CTACTATTTAAAAA 1 chr5:88824872-88825372 ( 62) TGGCTATTTAATAG 1 chr3:14125641-14126141 ( 40) AAACTATTTAAGCC 1 chr19:30394410-30394910 ( 47) GTACTATTTACAGG 1 chr17:44021163-44021663 ( 61) AGACTATTTAATCA 1 chr5:66757140-66757640 ( 27) CTACTATTTAATAG 1 chr4:53011921-53012421 ( 17) AAACTATTTAGGAT 1 chr11:106078021-10607852 ( 63) GGGATATTTAACAG 1 chr1:212488389-212488889 ( 8) TTACTATTTACCAA 1 chr7:23418071-23418571 ( 44) AAACTATTTAGCAC 1 chr3:107443410-107443910 ( 43) TGACTATTTACAGT 1 chr6:41767149-41767649 ( 57) CGAATATTTATCAG 1 chr17:7822581-7823081 ( 27) AAACTATTTACTCA 1 chr5:124706624-124707124 ( 55) TGGCTATTTATCAC 1 chr14:34081775-34082275 ( 59) TGGCTATTTATATT 1 chr12:106779894-10678039 ( 39) AGGCTATTTATGTT 1 chr1:229221077-229221577 ( 46) AGGCTATTTATACT 1 chr1:209884518-209885018 ( 22) ACACTATTTAACAG 1 chr17:7514636-7515136 ( 35) AAATTATTTATGAC 1 chr13:75437561-75438061 ( 78) GAACTATTTGAAGA 1 chr1:34763451-34763951 ( 69) AGACTATTTACTCA 1 chr3:55692915-55693415 ( 7) TTACTATTTATATC 1 chr10:114208330-11420883 ( 82) GTGCTATTTATGAC 1 chr10:75622452-75622952 ( 60) AAACTATTTGACTG 1 chr14:65472189-65472689 ( 74) AGGCTATTTACTAT 1 chr6:6467240-6467740 ( 21) TGAATATTTAACAC 1 chr1:221284028-221284528 ( 24) AGGATATTTATGAG 1 chr12:111819779-11182027 ( 52) CAGCTATTTATGGA 1 chr5:93607813-93608313 ( 50) GAACTATTTGTGGG 1 chrX:13647559-13648059 ( 15) GGCCTATTTATCAA 1 chr6:82331288-82331788 ( 12) AGGCTATTTACATT 1 chr12:53501377-53501877 ( 51) AAACTATTTAGAGC 1 chr5:88516519-88517019 ( 9) GTAATATTTATGTG 1 chr4:38620878-38621378 ( 38) TAATTATTTAACTT 1 chr12:54039773-54040273 ( 61) AAACTATTTGAGGG 1 chr5:122067233-122067733 ( 33) CAGATATTTAAGAG 1 chr1:30811134-30811634 ( 49) TGAATATTTACTAG 1 chr1:234974976-234975476 ( 45) GTGATATTTATCAG 1 chr2:169569890-169570390 ( 45) GGGTTATTTAAATG 1 chrX:150325312-150325812 ( 3) AGACTATTTAGACA 1 chr16:48499981-48500481 ( 21) AAACCATTTAAGAG 1 chr10:22912389-22912889 ( 80) GTGTTATTTAAAAG 1 chr7:104932218-104932718 ( 69) GAACTATTGAACAG 1 chr17:28599396-28599896 ( 76) GGGATATTTATAGT 1 chr5:50668042-50668542 ( 34) CTGCTATTTAAAAC 1 chr5:154461401-154461901 ( 41) TTGCTATTTAAAGT 1 chr12:49832858-49833358 ( 43) GAATTATTTATCCC 1 chr4:55378763-55379263 ( 34) AAACTATTTTAAAG 1 chr7:114481939-114482439 ( 16) CTACTATTTATGCA 1 chr9:18394811-18395311 ( 42) GCACTATTTACCAA 1 chr12:69476176-69476676 ( 49) GAGTTATTTATCTT 1 chr7:129332673-129333173 ( 53) TGGCTATTTAGAAT 1 chr1:115668990-115669490 ( 79) AGGATATTTATATT 1 chr1:226102929-226103429 ( 60) TTGCTATTTACAGG 1 chr17:58391416-58391916 ( 3) GAACTGTTTACAGG 1 chr1:21139519-21140019 ( 28) TGGCTATTTACAGC 1 chr5:62233352-62233852 ( 12) CTGCTATTTATGGG 1 chr8:42457990-42458490 ( 41) GAAATGTTTAACAG 1 chr17:70661149-70661649 ( 14) GACCTATTTATCCT 1 chr1:202222297-202222797 ( 69) TAAATATTTAGAGG 1 chr7:101882943-101883443 ( 80) AAGTTATTTATGTT 1 chr7:69609969-69610469 ( 31) GTGTTATTTATAGG 1 chr6:27505535-27506035 ( 59) AAACTATTTGGGAG 1 chr1:164787638-164788138 ( 53) AAGATATTTAACCC 1 chr6:28747607-28748107 ( 9) GAAATATTTGTGTG 1 chr8:37229054-37229554 ( 68) AGAATATTTGATAG 1 chr8:133381828-133382328 ( 20) TGACTGTTTATCTG 1 chr10:6669253-6669753 ( 62) GGACTATTTGCGGA 1 chr13:45194225-45194725 ( 10) TGGATATTTATACA 1 chr15:33126616-33127116 ( 53) CAGTTATTTATGGG 1 chr8:93846755-93847255 ( 79) GTGCTGTTTAAAAG 1 chr1:212291404-212291904 ( 56) CTGCTATTTACATT 1 chr1:173714639-173715139 ( 64) GAACGATTTAAGAA 1 chr8:10152240-10152740 ( 73) TGGATATTTAGAAG 1 chr3:177478301-177478801 ( 86) TGATTATTTACACT 1 chr11:126060729-12606122 ( 18) GAGCTGTTTAAGTA 1 chr21:37032889-37033389 ( 41) TACCTATTTATGCA 1 chr5:91314204-91314704 ( 19) CAGTTATTTAAACA 1 chr10:6141072-6141572 ( 22) GGACTATTGATGTG 1 chr1:109438736-109439236 ( 78) GAACTATTTTTAGC 1 chr1:227563165-227563665 ( 25) AGACTATTAACAAA 1 chr1:77412411-77412911 ( 42) GACTTATTTATTGG 1 chr3:169657311-169657811 ( 16) TGAATATTTGAATT 1 chr1:226268747-226269247 ( 69) CTATTATTTAAGTC 1 chr5:150319893-150320393 ( 28) CTGTTATTTAATAT 1 chr17:21040149-21040649 ( 18) GACTTATTTACCTG 1 chr22:32473225-32473725 ( 43) TACATATTTATTTG 1 chr5:399675-400175 ( 45) TGGCTGTTTATAGA 1 chr10:84361012-84361512 ( 83) GGGACATTTAACAG 1 chr1:234700197-234700697 ( 13) GCATTATTTATTAC 1 chr4:185095932-185096432 ( 15) AAACTATTAATTCA 1 chr7:130072159-130072659 ( 58) CAGCCATTTATCCG 1 chr14_GL000225v1_random: ( 45) GTAACATTTATCTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTATTTAWVAD MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 14 n= 52113 bayes= 8.59094 E= 2.9e-130 19 -102 68 -38 107 -376 36 -88 152 -276 -2 -1398 -69 158 -1398 -134 -1398 -334 -534 196 195 -1398 -276 -1398 -1398 -1398 -1398 200 -1398 -1398 -1398 200 -434 -1398 -434 197 189 -1398 -202 -434 71 -48 -217 52 47 8 -17 -58 95 -109 -34 -29 12 -82 61 -29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTATTTAWVAD MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 14 nsites= 162 E= 2.9e-130 0.283951 0.123457 0.401235 0.191358 0.524691 0.018519 0.320988 0.135802 0.716049 0.037037 0.246914 0.000000 0.154321 0.746914 0.000000 0.098765 0.000000 0.024691 0.006173 0.969136 0.962963 0.000000 0.037037 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.012346 0.000000 0.012346 0.975309 0.925926 0.000000 0.061728 0.012346 0.407407 0.179012 0.055556 0.358025 0.345679 0.265432 0.222222 0.166667 0.481481 0.117284 0.197531 0.203704 0.271605 0.141975 0.382716 0.203704 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTATTTAWVAD MEME-2 regular expression -------------------------------------------------------------------------------- [GA][AG][AG]CTATTTA[AT][ACG][AT][GAT] -------------------------------------------------------------------------------- Time 1398.98 secs. ******************************************************************************** ******************************************************************************** MOTIF RRVWGGGYMATCADTK MEME-3 width = 16 sites = 100 llr = 1054 E-value = 1.7e-073 ******************************************************************************** -------------------------------------------------------------------------------- Motif RRVWGGGYMATCADTK MEME-3 Description -------------------------------------------------------------------------------- Simplified A 43331:115a::a4:1 pos.-specific C 1231:::34::a:112 probability G 54326a911::::313 matrix T 12153::5::a::285 bits 2.0 * * ** 1.8 * **** 1.6 * **** 1.4 * **** Relative 1.2 ** **** Entropy 1.0 ** **** * (15.2 bits) 0.8 *** ***** * 0.6 *** ***** * 0.4 * ********* ** 0.2 * ************* 0.0 ---------------- Multilevel GGCTGGGTAATCAATT consensus AAAAT CC G G sequence G T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRVWGGGYMATCADTK MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr7:103100300-103100800 - 45 7.22e-09 CTGCCCAATA GGGTGGGTCATCAATT AGGAGAAATC chr17:41860481-41860981 - 41 1.58e-08 TTTCTCAAGA GGCTGGGTCATCAATG AGAAGGTGGA chr3:37197613-37198113 - 16 4.19e-08 CCTAGGGATA GGAAGGGCAATCAATT AATTTTTCCC chr20:35320351-35320851 + 59 5.52e-08 GACAGCCACC AGATGGGTCATCAGTG GCCGGTTACT chr9:3410429-3410929 + 41 1.14e-07 TGAAATGCTC GTAAGGGTAATCAGTT TTAGATGGCA chr12:3171144-3171644 - 44 1.71e-07 CATGAGAAGA GAGTGGGCAATCATTT GCAGACTGAT chr9:129334002-129334502 + 27 2.48e-07 CTGTTGATCC AGGTTGGTAATCAGTG GCCGGGCCTG chr16:19517270-19517770 + 12 2.48e-07 ATGTTTAACT ATATGGGTCATCAATG GCTTATGAAT chr5:177546330-177546830 + 33 2.95e-07 AGCCACTGAT GAGAGGGCAATCAGTG AGAAGAATCT chr5:138306952-138307452 + 40 2.95e-07 TATTCTTATA GGATGGGCCATCAATC AAAAATGACT chr6:53927177-53927677 + 72 3.49e-07 TAGACTCTGA GAGTGGGCAATCATTG TGACAAGCAT chr3:177714454-177714954 + 74 3.49e-07 AGCTGCCTAA AGTAGGGCAATCAGTT TAGTATGCAC chr7:65872571-65873071 - 55 3.49e-07 CCTCCCTCTG GGGATGGCAATCAATT GCCATCCTTT chr7:7640805-7641305 + 61 4.11e-07 GGAGATGGGC AGCGGGGTCATCAGTG ATCTTGATCA chr17:40108310-40108810 + 63 5.63e-07 AAAAGAGACA GAATGGATAATCAGTT AGAGACCGAC chr14:91380731-91381231 - 76 6.55e-07 TTTCTTGCA GGAAGGGGCATCAGTT TGGCACTTAG chr1:208235799-208236299 + 18 7.60e-07 GCTGGAGTCA GGGTGGGGCATCAGTG TTGTCAGGGC chr1:109438736-109439236 - 9 8.79e-07 AAGGTCAGCA GTCGGGGTCATCAATG AACTATTC chr5:50668042-50668542 + 49 1.01e-06 AAATAGCAGG AGGAGGGGAATCAATG TTTGATTCAG chr3:55692915-55693415 + 68 1.01e-06 AATATTTAGG ATTAGGGCAATCAATT TCCTAGGACA chr12:108631838-10863233 - 37 1.01e-06 CATTCAGAGG AGCTGGGGAATCAATC ATCCGAGAAC chr10:21292699-21293199 + 40 1.01e-06 AATGGCAAAG ATTTGGGTCATCATTT TTTAAACGAC chr2:55014920-55015420 - 49 1.16e-06 GCCTTCCATG AACTGGGCAATCAACT GTAGACTACG chr10:124917810-12491831 - 38 1.16e-06 GGAGTTACAG AAAAGGGTAATCAACT GACTGAAATA chr11:27201863-27202363 - 24 1.16e-06 TTCCAGAAGC AGCAAGGTCATCAGTT TTATGGCCAT chr6:37171929-37172429 + 40 1.34e-06 AAGCTGCGGA GGGTGGGTCATCATCT GAGCGGCTTA chr22:37330363-37330863 + 53 1.53e-06 TGAGTCTGCA GCTTGGGCAATCAATC GGTCGCCATG chr3:126357724-126358224 + 55 1.53e-06 TTGGGCTTTC AGCAGGACAATCAGTT ACCCTCCGGA chr21:29277386-29277886 + 27 1.98e-06 gttccatagt tacatggtaatcaatt tttggcaaag chr14_GL000225v1_random: - 26 2.24e-06 ATGTTACATC ACCTGGGTGATCAGTG CAGAGATACG chrY:11327418-11327918 + 38 2.24e-06 ttgttacatc acctgggtgatcagtg gagatatctg chr5:49599400-49599900 + 12 2.24e-06 gagttgaatc acctgggtgatcagtg cagagatatg chr14_GL000225v1_random: - 72 2.24e-06 GAGTTGCATC ACCTGGGTGATCAGTG CAGAGATATG chr3:168883091-168883591 + 52 2.24e-06 GGCACTGGTA GGGTGGGTCATCACTC AGAATACCAA chr1:110338807-110339307 - 39 2.53e-06 CTATTTGGGA GGTCGGGCCATCAGTT TCGGCGTTTT chr1:167797015-167797515 + 59 2.53e-06 TGGAGAGGAG GTCGTGGTAATCATTT AATGCTGACT chr18:57819866-57820366 - 8 2.85e-06 TCTGGGGACA GCACTGGTAATCAGTT TTTCCTG chr1:76759959-76760459 - 71 3.20e-06 AATTACTCTC GCGGTGGTCATCAATG CCCTGTTAAT chr2:85354410-85354910 - 12 3.20e-06 TTCGCTGGCT GGCTGGTTAATCAGTG CTCAAAGCTG chrX:13658620-13659120 + 69 3.58e-06 GTTAGTTTCA CAAAGGGCCATCAATT CAGGATCTTA chr3:138082324-138082824 - 3 3.58e-06 CAGAGACATG AATGTGGTCATCAGTT TT chr17:68462821-68463321 + 26 3.58e-06 GGTGGTGCAG GGAGTGGTAATCATTC TCTAGAATCA chr11:126060729-12606122 + 60 3.58e-06 GCTGATGAGA ACCATGGCAATCAATC AAAGCATCCC chr13:45194225-45194725 + 30 4.00e-06 TCCACCAACG TTGAGGGTCATCAGTG TGGATTTGCA chr6:40882271-40882771 + 53 4.00e-06 GCAGCCAGGC AGAGTGGCAATCAATC AAGCAATTCC chr17:43671068-43671568 + 78 4.46e-06 ATACAGCTTG AGATGGATAATCAACT CCTCCTA chr16:70066718-70067218 + 59 4.46e-06 GTAGACTACC ACAGTGGCAATCAATG GAACACTTCA chr1:225653599-225654099 + 35 4.46e-06 ATAAATGGAA AATATGGTCATCATTG TTCCCTTCGC chr15:38354223-38354723 + 36 4.96e-06 TCTTGGCTTC AAAAGGGACATCATTT GATTTCTGAA chr22:25942957-25943457 - 55 4.96e-06 CGGCAGGAGC AGATGGGCCATCAAGG GAGATGATGT chr2:95333888-95334388 - 59 4.96e-06 CGCCCCACTC ACACGGGTCATCAATC CTCATGTTTT chr2:165825020-165825520 + 53 4.96e-06 gccaaactca aggttggaaatcattt tccctcagaa chr17:36133558-36134058 - 43 4.96e-06 ACTCTGTACA GGTTGGGTCATCAAGG GCTCAGATCT chr5:32217734-32218234 + 9 5.50e-06 GCTACCAC GCCGGGGCAATCACTT CTGTGTCCTA chr1:157044254-157044754 - 25 6.10e-06 GGTAGAAGTA GAGTGGAGCATCAGTT ACCAGGGTCC chr10:75622452-75622952 - 33 6.10e-06 TTCTTTCTCA GAATGGGTAAGCAGTG AGTGAGTTTG chr7:66033415-66033915 - 2 6.10e-06 TTTATTTATT GACTGGGAAATCAACT A chr13:41996010-41996510 + 75 6.10e-06 TCTGACTTAA GGGTGGATAATCAGTA GCTTCTACAG chr5:95861477-95861977 - 82 6.10e-06 CAT TCGATGGTCATCAGTT TTATCAGGGG chr2:169569890-169570390 + 64 6.10e-06 AACCCCTGAA GGTTGGGTCATCATGT GAGAAAACTG chr12:38316449-38316949 + 20 6.75e-06 TAATGTGATG GAGAGGGTAATCATCC GGTCCGTTAT chr3:177478301-177478801 + 7 6.75e-06 TCTTTG CAAATGGCAATCAATT TTTGCTACTA chr12:34022168-34022668 + 8 6.75e-06 TGCGATT GAGAGGGTAATCATCC GGTCCGTTAT chr7:66183538-66184038 - 15 6.75e-06 CTTCTGACCA GTGTGGACAATCAATC AACAACTGTA chr1:23544613-23545113 + 16 7.45e-06 ATACCCAGGA AAAGAGGTCATCATTT TTGTTCCTCT chr7:116547259-116547759 + 48 7.45e-06 TGCACTCATC AGCTGGGGCATCATCT CCCTGGGGTA chr6:32636490-32636990 - 75 7.45e-06 CTCGTGGATA GATGAGGTCATCAGTT ATACGGCATC chr1:83857109-83857609 - 73 7.45e-06 TTTTAAAAAA TCAGTGGTAATCAATT TGAACAGTAC chr1:200510053-200510553 + 29 8.22e-06 TAGTGCCCCA GAGTGGGTCATCATAT TCCTGTGAGA chr16:66406446-66406946 + 57 8.22e-06 GCGGCCGGGC ATCCTGGCAATCAATG GACCGCAGGT chr6:170280345-170280845 + 43 9.05e-06 GGACTCAGCA GAGTGGGCAATCACCT AGGCGCGCCA chr10:77162540-77163040 - 26 9.05e-06 CATATTTACA GACTGGAAAATCAATG GAGATGGAAT chr16:84138675-84139175 + 68 9.95e-06 CCTAGCAGTG TAAAGGGCAATCAACT CAAATAGAAA chr8:29675473-29675973 - 83 1.09e-05 TG GGCTGGGTCATCATCA TTTCTCAGAC chr2:27032421-27032921 + 37 1.09e-05 acagagcgCG GCCCTGGcaatcaatc aatcaattga chr17:7514636-7515136 - 84 1.31e-05 A TTATGGGTGATCATTT TTCTCCCTCT chr14_GL000225v1_random: - 21 1.43e-05 GAGTTACATC ACCTAGGTGATCAGTG CAGAGATTTG chr17:40560190-40560690 + 8 1.70e-05 TCCTGGA GGCTGGGGAAGCAGTG AGAGCCCAGC chr17:65022749-65023249 + 55 1.84e-05 gttgttgttt acttagggaatcaatg ccaagtttga chr15:66498750-66499250 + 12 1.84e-05 GAACACTTCT CAAGAGGTAATCAATT TTACTGCAGT chr5:37668444-37668944 + 79 2.17e-05 CTGCAGCTTC CAGCTGGTCATCAGTT AGAGTC chr7:135728213-135728713 - 39 2.17e-05 TATGTTTACG ATGATGGTCATCACTC CAGCCCTAGG chr10:31646516-31647016 - 46 2.17e-05 CTATCAAACA AGATGGATAATCAAGC TTGGTAATAT chr5:124661428-124661928 - 51 2.35e-05 ACACCGAGCA GGCTGGTCAATCAATA ACCAGCTAAG chr1:226268747-226269247 - 42 2.35e-05 GACACAGTTC ATCTGTGTCATCAGTT CCAAGACTAC chr6:85498822-85499322 - 43 2.54e-05 CATTTACCTA ATCTTGGCAAGCAGTT ATGGCTTCTT chr14:65472189-65472689 + 40 2.74e-05 aatttcaaca ggagggacaatcatct aagtgatagc chr5:149959256-149959756 - 10 2.74e-05 TCATTTCACC TCAATGGGCATCAATG TTTTCACCT chr16:87388433-87388933 + 64 2.74e-05 ACATCACTCA AGCTGGGCCATCACAT TCAATTCTTA chr14:24296730-24297230 + 39 2.96e-05 CTTGAGAACT GAGAAGACAATCAATC CTAGGAGAGC chr17:70661149-70661649 + 34 3.19e-05 TCCTTTCTGT GGCTTGAGCATCATTC CCTGGACAAA chr5:99900366-99900866 - 9 3.19e-05 TATCCAGGTA GGAAAGATGATCAGTT CTGTAAAT chr5:181169531-181170031 + 41 3.68e-05 TGGTTACGGA GAAAAGGCCATCAAGG GTATTTATAC chr5:174371533-174372033 + 17 3.68e-05 CCTTGGGGAC CTGCTGGTAATCATTT GCAGCAGCCA chr8:30382234-30382734 + 53 3.95e-05 AGAGCTGCCA GTTAAGGCAATCAATA CATCCAAACA chr19:18364963-18365463 + 70 3.95e-05 TGAAATGCAC GTTCTGGAAATCAGTT TCTATTTTGG chr3:186806162-186806662 - 66 3.95e-05 CTGAGGCGAC TGTGGGGACATCAGTG ATCGTAAGTC chr1:234724153-234724653 - 80 5.19e-05 GGCCG TCCAGGGTAATCATGC CGCAGAGCTG chr5:143596003-143596503 + 43 7.12e-05 TAGTTTTGTT AGCATGGCAATCACAG GCAGTCATTA chr5:43609690-43610190 - 25 7.56e-05 ACATTTAGAA GACTGGTGCATCAGTA CAGGTGACAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRVWGGGYMATCADTK MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:103100300-103100800 7.2e-09 44_[-3]_40 chr17:41860481-41860981 1.6e-08 40_[-3]_44 chr3:37197613-37198113 4.2e-08 15_[-3]_69 chr20:35320351-35320851 5.5e-08 58_[+3]_26 chr9:3410429-3410929 1.1e-07 40_[+3]_44 chr12:3171144-3171644 1.7e-07 43_[-3]_41 chr9:129334002-129334502 2.5e-07 26_[+3]_58 chr16:19517270-19517770 2.5e-07 11_[+3]_73 chr5:177546330-177546830 2.9e-07 32_[+3]_52 chr5:138306952-138307452 2.9e-07 39_[+3]_45 chr6:53927177-53927677 3.5e-07 71_[+3]_13 chr3:177714454-177714954 3.5e-07 73_[+3]_11 chr7:65872571-65873071 3.5e-07 54_[-3]_30 chr7:7640805-7641305 4.1e-07 60_[+3]_24 chr17:40108310-40108810 5.6e-07 62_[+3]_22 chr14:91380731-91381231 6.5e-07 75_[-3]_9 chr1:208235799-208236299 7.6e-07 17_[+3]_67 chr1:109438736-109439236 8.8e-07 8_[-3]_76 chr5:50668042-50668542 1e-06 48_[+3]_36 chr3:55692915-55693415 1e-06 67_[+3]_17 chr12:108631838-10863233 1e-06 36_[-3]_48 chr10:21292699-21293199 1e-06 39_[+3]_45 chr2:55014920-55015420 1.2e-06 48_[-3]_36 chr10:124917810-12491831 1.2e-06 37_[-3]_47 chr11:27201863-27202363 1.2e-06 23_[-3]_61 chr6:37171929-37172429 1.3e-06 39_[+3]_45 chr22:37330363-37330863 1.5e-06 52_[+3]_32 chr3:126357724-126358224 1.5e-06 54_[+3]_30 chr21:29277386-29277886 2e-06 26_[+3]_58 chr14_GL000225v1_random: 2.2e-06 25_[-3]_59 chrY:11327418-11327918 2.2e-06 37_[+3]_47 chr5:49599400-49599900 2.2e-06 11_[+3]_73 chr14_GL000225v1_random: 2.2e-06 71_[-3]_13 chr3:168883091-168883591 2.2e-06 51_[+3]_33 chr1:110338807-110339307 2.5e-06 38_[-3]_46 chr1:167797015-167797515 2.5e-06 58_[+3]_26 chr18:57819866-57820366 2.8e-06 7_[-3]_77 chr1:76759959-76760459 3.2e-06 70_[-3]_14 chr2:85354410-85354910 3.2e-06 11_[-3]_73 chrX:13658620-13659120 3.6e-06 68_[+3]_16 chr3:138082324-138082824 3.6e-06 2_[-3]_82 chr17:68462821-68463321 3.6e-06 25_[+3]_59 chr11:126060729-12606122 3.6e-06 59_[+3]_25 chr13:45194225-45194725 4e-06 29_[+3]_55 chr6:40882271-40882771 4e-06 52_[+3]_32 chr17:43671068-43671568 4.5e-06 77_[+3]_7 chr16:70066718-70067218 4.5e-06 58_[+3]_26 chr1:225653599-225654099 4.5e-06 34_[+3]_50 chr15:38354223-38354723 5e-06 35_[+3]_49 chr22:25942957-25943457 5e-06 54_[-3]_30 chr2:95333888-95334388 5e-06 58_[-3]_26 chr2:165825020-165825520 5e-06 52_[+3]_32 chr17:36133558-36134058 5e-06 42_[-3]_42 chr5:32217734-32218234 5.5e-06 8_[+3]_76 chr1:157044254-157044754 6.1e-06 24_[-3]_60 chr10:75622452-75622952 6.1e-06 32_[-3]_52 chr7:66033415-66033915 6.1e-06 1_[-3]_83 chr13:41996010-41996510 6.1e-06 74_[+3]_10 chr5:95861477-95861977 6.1e-06 81_[-3]_3 chr2:169569890-169570390 6.1e-06 63_[+3]_21 chr12:38316449-38316949 6.7e-06 19_[+3]_65 chr3:177478301-177478801 6.7e-06 6_[+3]_78 chr12:34022168-34022668 6.7e-06 7_[+3]_77 chr7:66183538-66184038 6.7e-06 14_[-3]_70 chr1:23544613-23545113 7.5e-06 15_[+3]_69 chr7:116547259-116547759 7.5e-06 47_[+3]_37 chr6:32636490-32636990 7.5e-06 74_[-3]_10 chr1:83857109-83857609 7.5e-06 72_[-3]_12 chr1:200510053-200510553 8.2e-06 28_[+3]_56 chr16:66406446-66406946 8.2e-06 56_[+3]_28 chr6:170280345-170280845 9e-06 42_[+3]_42 chr10:77162540-77163040 9e-06 25_[-3]_59 chr16:84138675-84139175 9.9e-06 67_[+3]_17 chr8:29675473-29675973 1.1e-05 82_[-3]_2 chr2:27032421-27032921 1.1e-05 36_[+3]_48 chr17:7514636-7515136 1.3e-05 83_[-3]_1 chr14_GL000225v1_random: 1.4e-05 20_[-3]_64 chr17:40560190-40560690 1.7e-05 7_[+3]_77 chr17:65022749-65023249 1.8e-05 54_[+3]_30 chr15:66498750-66499250 1.8e-05 11_[+3]_73 chr5:37668444-37668944 2.2e-05 78_[+3]_6 chr7:135728213-135728713 2.2e-05 38_[-3]_46 chr10:31646516-31647016 2.2e-05 45_[-3]_39 chr5:124661428-124661928 2.4e-05 50_[-3]_34 chr1:226268747-226269247 2.4e-05 41_[-3]_43 chr6:85498822-85499322 2.5e-05 42_[-3]_42 chr14:65472189-65472689 2.7e-05 39_[+3]_45 chr5:149959256-149959756 2.7e-05 9_[-3]_75 chr16:87388433-87388933 2.7e-05 63_[+3]_21 chr14:24296730-24297230 3e-05 38_[+3]_46 chr17:70661149-70661649 3.2e-05 33_[+3]_51 chr5:99900366-99900866 3.2e-05 8_[-3]_76 chr5:181169531-181170031 3.7e-05 40_[+3]_44 chr5:174371533-174372033 3.7e-05 16_[+3]_68 chr8:30382234-30382734 4e-05 52_[+3]_32 chr19:18364963-18365463 4e-05 69_[+3]_15 chr3:186806162-186806662 4e-05 65_[-3]_19 chr1:234724153-234724653 5.2e-05 79_[-3]_5 chr5:143596003-143596503 7.1e-05 42_[+3]_42 chr5:43609690-43610190 7.6e-05 24_[-3]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRVWGGGYMATCADTK MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RRVWGGGYMATCADTK width=16 seqs=100 chr7:103100300-103100800 ( 45) GGGTGGGTCATCAATT 1 chr17:41860481-41860981 ( 41) GGCTGGGTCATCAATG 1 chr3:37197613-37198113 ( 16) GGAAGGGCAATCAATT 1 chr20:35320351-35320851 ( 59) AGATGGGTCATCAGTG 1 chr9:3410429-3410929 ( 41) GTAAGGGTAATCAGTT 1 chr12:3171144-3171644 ( 44) GAGTGGGCAATCATTT 1 chr9:129334002-129334502 ( 27) AGGTTGGTAATCAGTG 1 chr16:19517270-19517770 ( 12) ATATGGGTCATCAATG 1 chr5:177546330-177546830 ( 33) GAGAGGGCAATCAGTG 1 chr5:138306952-138307452 ( 40) GGATGGGCCATCAATC 1 chr6:53927177-53927677 ( 72) GAGTGGGCAATCATTG 1 chr3:177714454-177714954 ( 74) AGTAGGGCAATCAGTT 1 chr7:65872571-65873071 ( 55) GGGATGGCAATCAATT 1 chr7:7640805-7641305 ( 61) AGCGGGGTCATCAGTG 1 chr17:40108310-40108810 ( 63) GAATGGATAATCAGTT 1 chr14:91380731-91381231 ( 76) GGAAGGGGCATCAGTT 1 chr1:208235799-208236299 ( 18) GGGTGGGGCATCAGTG 1 chr1:109438736-109439236 ( 9) GTCGGGGTCATCAATG 1 chr5:50668042-50668542 ( 49) AGGAGGGGAATCAATG 1 chr3:55692915-55693415 ( 68) ATTAGGGCAATCAATT 1 chr12:108631838-10863233 ( 37) AGCTGGGGAATCAATC 1 chr10:21292699-21293199 ( 40) ATTTGGGTCATCATTT 1 chr2:55014920-55015420 ( 49) AACTGGGCAATCAACT 1 chr10:124917810-12491831 ( 38) AAAAGGGTAATCAACT 1 chr11:27201863-27202363 ( 24) AGCAAGGTCATCAGTT 1 chr6:37171929-37172429 ( 40) GGGTGGGTCATCATCT 1 chr22:37330363-37330863 ( 53) GCTTGGGCAATCAATC 1 chr3:126357724-126358224 ( 55) AGCAGGACAATCAGTT 1 chr21:29277386-29277886 ( 27) TACATGGTAATCAATT 1 chr14_GL000225v1_random: ( 26) ACCTGGGTGATCAGTG 1 chrY:11327418-11327918 ( 38) ACCTGGGTGATCAGTG 1 chr5:49599400-49599900 ( 12) ACCTGGGTGATCAGTG 1 chr14_GL000225v1_random: ( 72) ACCTGGGTGATCAGTG 1 chr3:168883091-168883591 ( 52) GGGTGGGTCATCACTC 1 chr1:110338807-110339307 ( 39) GGTCGGGCCATCAGTT 1 chr1:167797015-167797515 ( 59) GTCGTGGTAATCATTT 1 chr18:57819866-57820366 ( 8) GCACTGGTAATCAGTT 1 chr1:76759959-76760459 ( 71) GCGGTGGTCATCAATG 1 chr2:85354410-85354910 ( 12) GGCTGGTTAATCAGTG 1 chrX:13658620-13659120 ( 69) CAAAGGGCCATCAATT 1 chr3:138082324-138082824 ( 3) AATGTGGTCATCAGTT 1 chr17:68462821-68463321 ( 26) GGAGTGGTAATCATTC 1 chr11:126060729-12606122 ( 60) ACCATGGCAATCAATC 1 chr13:45194225-45194725 ( 30) TTGAGGGTCATCAGTG 1 chr6:40882271-40882771 ( 53) AGAGTGGCAATCAATC 1 chr17:43671068-43671568 ( 78) AGATGGATAATCAACT 1 chr16:70066718-70067218 ( 59) ACAGTGGCAATCAATG 1 chr1:225653599-225654099 ( 35) AATATGGTCATCATTG 1 chr15:38354223-38354723 ( 36) AAAAGGGACATCATTT 1 chr22:25942957-25943457 ( 55) AGATGGGCCATCAAGG 1 chr2:95333888-95334388 ( 59) ACACGGGTCATCAATC 1 chr2:165825020-165825520 ( 53) AGGTTGGAAATCATTT 1 chr17:36133558-36134058 ( 43) GGTTGGGTCATCAAGG 1 chr5:32217734-32218234 ( 9) GCCGGGGCAATCACTT 1 chr1:157044254-157044754 ( 25) GAGTGGAGCATCAGTT 1 chr10:75622452-75622952 ( 33) GAATGGGTAAGCAGTG 1 chr7:66033415-66033915 ( 2) GACTGGGAAATCAACT 1 chr13:41996010-41996510 ( 75) GGGTGGATAATCAGTA 1 chr5:95861477-95861977 ( 82) TCGATGGTCATCAGTT 1 chr2:169569890-169570390 ( 64) GGTTGGGTCATCATGT 1 chr12:38316449-38316949 ( 20) GAGAGGGTAATCATCC 1 chr3:177478301-177478801 ( 7) CAAATGGCAATCAATT 1 chr12:34022168-34022668 ( 8) GAGAGGGTAATCATCC 1 chr7:66183538-66184038 ( 15) GTGTGGACAATCAATC 1 chr1:23544613-23545113 ( 16) AAAGAGGTCATCATTT 1 chr7:116547259-116547759 ( 48) AGCTGGGGCATCATCT 1 chr6:32636490-32636990 ( 75) GATGAGGTCATCAGTT 1 chr1:83857109-83857609 ( 73) TCAGTGGTAATCAATT 1 chr1:200510053-200510553 ( 29) GAGTGGGTCATCATAT 1 chr16:66406446-66406946 ( 57) ATCCTGGCAATCAATG 1 chr6:170280345-170280845 ( 43) GAGTGGGCAATCACCT 1 chr10:77162540-77163040 ( 26) GACTGGAAAATCAATG 1 chr16:84138675-84139175 ( 68) TAAAGGGCAATCAACT 1 chr8:29675473-29675973 ( 83) GGCTGGGTCATCATCA 1 chr2:27032421-27032921 ( 37) GCCCTGGCAATCAATC 1 chr17:7514636-7515136 ( 84) TTATGGGTGATCATTT 1 chr14_GL000225v1_random: ( 21) ACCTAGGTGATCAGTG 1 chr17:40560190-40560690 ( 8) GGCTGGGGAAGCAGTG 1 chr17:65022749-65023249 ( 55) ACTTAGGGAATCAATG 1 chr15:66498750-66499250 ( 12) CAAGAGGTAATCAATT 1 chr5:37668444-37668944 ( 79) CAGCTGGTCATCAGTT 1 chr7:135728213-135728713 ( 39) ATGATGGTCATCACTC 1 chr10:31646516-31647016 ( 46) AGATGGATAATCAAGC 1 chr5:124661428-124661928 ( 51) GGCTGGTCAATCAATA 1 chr1:226268747-226269247 ( 42) ATCTGTGTCATCAGTT 1 chr6:85498822-85499322 ( 43) ATCTTGGCAAGCAGTT 1 chr14:65472189-65472689 ( 40) GGAGGGACAATCATCT 1 chr5:149959256-149959756 ( 10) TCAATGGGCATCAATG 1 chr16:87388433-87388933 ( 64) AGCTGGGCCATCACAT 1 chr14:24296730-24297230 ( 39) GAGAAGACAATCAATC 1 chr17:70661149-70661649 ( 34) GGCTTGAGCATCATTC 1 chr5:99900366-99900866 ( 9) GGAAAGATGATCAGTT 1 chr5:181169531-181170031 ( 41) GAAAAGGCCATCAAGG 1 chr5:174371533-174372033 ( 17) CTGCTGGTAATCATTT 1 chr8:30382234-30382734 ( 53) GTTAAGGCAATCAATA 1 chr19:18364963-18365463 ( 70) GTTCTGGAAATCAGTT 1 chr3:186806162-186806662 ( 66) TGTGGGGACATCAGTG 1 chr1:234724153-234724653 ( 80) TCCAGGGTAATCATGC 1 chr5:143596003-143596503 ( 43) AGCATGGCAATCACAG 1 chr5:43609690-43610190 ( 25) GACTGGTGCATCAGTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRVWGGGYMATCADTK MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 50915 bayes= 10.9126 E= 1.7e-073 61 -232 94 -147 17 -48 60 -64 22 35 0 -83 26 -165 -74 91 -132 -1329 135 6 -1329 -1329 198 -464 -106 -1329 176 -306 -206 35 -119 103 109 68 -184 -1329 200 -1329 -1329 -1329 -1329 -1329 -306 196 -1329 200 -1329 -1329 200 -1329 -1329 -1329 64 -206 44 -25 -306 -106 -206 166 -232 -56 31 91 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRVWGGGYMATCADTK MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 100 E= 1.7e-073 0.380000 0.050000 0.480000 0.090000 0.280000 0.180000 0.380000 0.160000 0.290000 0.320000 0.250000 0.140000 0.300000 0.080000 0.150000 0.470000 0.100000 0.000000 0.640000 0.260000 0.000000 0.000000 0.990000 0.010000 0.120000 0.000000 0.850000 0.030000 0.060000 0.320000 0.110000 0.510000 0.530000 0.400000 0.070000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.030000 0.970000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.390000 0.060000 0.340000 0.210000 0.030000 0.120000 0.060000 0.790000 0.050000 0.170000 0.310000 0.470000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRVWGGGYMATCADTK MEME-3 regular expression -------------------------------------------------------------------------------- [GA][GA][CAG][TA][GT]GG[TC][AC]ATCA[AGT]T[TG] -------------------------------------------------------------------------------- Time 2011.21 secs. ******************************************************************************** ******************************************************************************** MOTIF SCWSCGSCBYCBGGSSBCSSSG MEME-4 width = 22 sites = 91 llr = 932 E-value = 8.1e-034 ******************************************************************************** -------------------------------------------------------------------------------- Motif SCWSCGSCBYCBGGSSBCSSSG MEME-4 Description -------------------------------------------------------------------------------- Simplified A 1:3::::::1::11211:::11 pos.-specific C 49149:5645843353375542 probability G 5:15:a3331245634425346 matrix T :15:1:2133:21:123::11: bits 2.0 * 1.8 * 1.6 * 1.4 * ** Relative 1.2 * ** * Entropy 1.0 * ** * * (14.8 bits) 0.8 * *** * ** * 0.6 ** ***** * * *** * 0.4 ** ***** **** ***** 0.2 ********************** 0.0 ---------------------- Multilevel GCTGCGCCCCCCGGCGGCGCGG consensus C AC GGTTGGCCGCCGCGCC sequence G T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCWSCGSCBYCBGGSSBCSSSG MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr6:107114161-107114661 + 45 4.05e-11 GGAAGGGAGC GCTGCGCCCCCTGGCGGCGGGG CCCATCCCTC chr12:8243257-8243757 - 52 5.21e-08 CCCGTCCTAA GCTCCGCCTCCCAGAGTCCGCG CACCGCCTGG chr9:11171-11671 + 22 8.97e-08 agagtggtgg ccaccgccccctgctggcgccg gggcactgca chr19:5803915-5804415 - 23 8.97e-08 CCGCGCTCCC ACAGCGCTCCCTGGCGGCGCCG GGCTAACTCG chr15:72231097-72231597 - 45 1.27e-07 GGGCAACCTG CCCGCGCGTTCCGCCGCCGCCG CCGCGCTTCC chr19:4400471-4400971 + 65 1.27e-07 CGTAGCAGTT GCAGCGCCCCCTGGAGTCGTGG AGGTGACCCT chr1:211133946-211134446 + 53 1.50e-07 GGCGGAGGGA GCAGCGGCGCCTGGGCCGGCGG CGCCCCCTAC chr22:41446598-41447098 + 77 2.08e-07 GTGATGCGTC CCTCCGCCCTGCAGGGGCGGGG CC chr15:73992119-73992619 - 11 2.44e-07 TCTTCCTGCG CCCGCGCCGCCGCGGGTGGCCG CGCGGGTGAA chr21:44939702-44940202 + 44 2.44e-07 CCGGGTACTT CCGGCGGCCGCGGGGCTCCCGG CAGCCGCGGC chr1:228165605-228166105 + 42 2.44e-07 TCGAGGCGCC ACTCCGGGGCGCGGCGGCCCGG TCTGGCGCTG chr7:141551093-141551593 - 41 2.85e-07 GAAACCGCTG CCGCCGCCCTCGGGTTCCGCCG CGGGGCTGCG chr19:17334562-17335062 + 14 3.33e-07 GGAGACAAAG GCCGCGCCCGCCCGCGCCGGCC TCGGTCCTCG chr17:50707682-50708182 + 76 3.33e-07 CCGACCCGGG GCTCCGGCGCCCGGGCTGGCTG TTT chr1:147172322-147172822 + 76 3.87e-07 GTGCGCGTTC CCTGCGGCCTGCAGCCTCGGCG CCC chr13:36999140-36999640 - 17 3.87e-07 GACCTCTCTG GCGGCGGGGCCGGGTCGCGCGG GCGCGCTTCC chr1:244652957-244653457 + 20 4.49e-07 CGATGCTTCC GCCCCGGCTGCCGCGGGCCGGG CTGTACGCTT chr8:13276305-13276805 + 17 4.49e-07 TGCGGCTGGC ACTGCGGCCCCGGGAAGCGCCA ACTGCAGGCG chr16:667763-668263 + 9 4.49e-07 GCCAGGAC CCTGCGCTGTCCGCCGTGGCCG GCGCGTCCAC chr10:93702411-93702911 + 14 5.19e-07 CATCTAAATG GCACCGTCCCCCGAGTGCGCCG ACCTTGTGCT chr19:33777972-33778472 + 35 5.19e-07 CCGCTCCCGA GCAGCGGCTTGGGGATCCCCGG CGGGGCCGCC chr4:82374296-82374796 - 21 9.10e-07 CGCGCGGTCC GCTGCGGCGCCTGGCGCTCCGC GGGCGTCCGG chr5:116574634-116575134 - 1 9.10e-07 CCGGGACTTG GCTCCGCCCGGGAGCGGCGGCC chr1:225474842-225475342 - 43 1.04e-06 ACGCGGGTGC GCAGCGCCCTCTGCCGGCCGAC GGGCGTCCTT chr1:27321856-27322356 - 3 1.04e-06 GAGCCGCGTT CCTCTGGGCCCGGCCAGCCCCG CC chr19:33080883-33081383 - 76 1.04e-06 CGG GCCCCGCCCCCTCGCTACGGCG GCCTTGGCAG chr1:1375033-1375533 + 24 1.19e-06 GTTCCTACGC ACAGCGCCCGCTGGCGTCCTCG CGGCCCCCGA chr1:235104085-235104585 - 19 1.19e-06 CCGTGCCTAC CCCCCGGCCTCCGGGAGCCTCG AGCCCCAGCG chr3:53347431-53347931 + 49 1.35e-06 CCGCGCGCAC GCTCCGGGCGCCGGGTTCCGGC GTTGTCAGGG chr2:223957177-223957677 + 7 1.75e-06 CTTCGC GTTCCGCGTTCCGGGTTCCGGG GGAAGTGTGT chr14:90396755-90397255 - 6 2.24e-06 GCGCCGTATC CCTCCGCCGCGGCGGAGCCGCC TCGCG chr1:54715562-54716062 - 79 2.24e-06 . GCGGCTCCTTCCGGCGGCGCGG GTTCCCTTCC chr10:32346069-32346569 + 17 2.24e-06 GTGCACAGAA CCTGCGCTCCCGGCCCGGGCAG CGGCGCGCAG chr12:96906771-96907271 - 79 2.52e-06 . ACTGCGGGCCGGGGCGGCCCTC TCCACGCCCC chr6:143450468-143450968 - 34 2.84e-06 GGTCCCGGGC CCGCCGCGTTCCGCTGCCCGCG CTCCTCCTCT chr1:26695414-26695914 - 78 2.84e-06 C CCAGCGCCGTCGCGGCCGCCTG GCAAACCCGG chr3:14125641-14126141 + 71 3.59e-06 CATTCAACAA GCAGCGCCTCCTACCAGGGCGC TGGGTGTG chr19:40634430-40634930 - 32 3.59e-06 GCCGGCTTGG GCTGCGCCGGCGCGCGGTGGCC ATCGGGGGGC chr4:4541838-4542338 + 67 3.59e-06 AAGGTTCCGG CCTGCGCCCTGCTACCGCGGCG GGAGGAAAAA chr10:101694078-10169457 + 31 4.02e-06 CGACCAGGCC GCGGCGCCCCGCCCTTTCCcgg gacgcggggc chr5:173144210-173144710 - 26 4.49e-06 CAGTCTCGGG GCAGCGCCCCCTAGAGACCGGC GAAAATGGCA chr17:18780985-18781485 + 63 5.02e-06 CCCGTACGCT GCTGCGCTGACGTGGCTCCCGG AAGTAGGGCT chr8:94719569-94720069 + 65 6.23e-06 TCCCGGGCCG CCTGCGGGGACGCGGTTGGCGG CGACACCGGA chr15:65517496-65517996 - 12 6.23e-06 TCTTGGCCCG GCTGCGCCTTCGCCAGTCGGAA AGCGGATCGC chr17:39980637-39981137 + 3 6.92e-06 CT GCTCCGTCATCGTGCGGCCCGA CGCTATCTCG chr8:37849673-37850173 + 15 6.92e-06 AAGGGTTGCA CCCCCGTCTTCCGGCCAGCGCG ACGGAGGCAT chr10:120851006-12085150 - 60 7.68e-06 AGTTCTACAG GCTCCGGGTTCCACCGCTCCCG GATTCCATCG chr19:1383558-1384058 - 11 7.68e-06 GCGCTTTCGG CCTCCGTGGTCGTGTTGCGCCG TGCACCCCCA chr5:96935739-96936239 + 78 7.68e-06 CCGGAACGGC GGAGCGGCGCCGCCCCTCGCGG C chr1:93078913-93079413 - 53 8.51e-06 GCGCGGAGGA ACACCGCGCCCTGCGTCCCCGA CTGGGGCTGA chr17:63842515-63843015 + 23 8.51e-06 tccactccgt gctctgtgctccgcgatccggg acttggcgat chr10:22229084-22229584 + 18 1.04e-05 GGAAGGAGTG GCCGCGCTCACCTGCAGCCGGG AGAGGACAGC chr1:155250604-155251104 - 19 1.04e-05 CTGGTGCTAC ACAGCGCCCCCTGCCGCCCACA GTGTCCATGG chr15:65610930-65611430 - 77 1.15e-05 GC CCAGCGCGGAGTGCAGGCGCCG GATTCCCTTC chr1:227735098-227735598 - 42 1.15e-05 AACGCGGCGC CCTGCGTCTTCTGGTTCCGAGG CTGGTCCTCA chr1:163321601-163322101 + 32 1.15e-05 GCGAGCAATG GTTCCGCCCTGCGCCCTGCCCC TTCCATGACA chr17:18087620-18088120 - 11 1.26e-05 GACACTATCG GTTCCGCCCGCTGGGCCGGCCA GGCTGCGGAC chr1:234997177-234997677 - 45 1.39e-05 TGGACATCAT GCTCTGTCTCCTCGGATCCCTG GCATCTGGCG chr12:103956950-10395745 - 65 1.39e-05 ACTTTCCTGT CCGGTGCGGCCCCGGGTCCCTG TATTTTGGGT chr3:188348599-188349099 + 76 1.53e-05 ATGCCTTGAG ATAGCGGGGTCCGGGGGGCGGG GAT chr5:40835068-40835568 + 21 1.68e-05 GGGGCGCGGT GCAGCGTTCTCGAGCGTCCGTC GTCGTAGTGT chr1:224330206-224330706 - 56 1.68e-05 GACGCCGTTG ACAGCGTCTCCGCACACCGCGC CGGGGTAGGA chr19:58380514-58381014 - 57 1.68e-05 CGGTCCTCGC GCTCCGGGTCCGGACCGGCCAC ACAGCACTCG chr17:42773135-42773635 - 73 1.84e-05 TTCCGG CCTTCGCTTCCGCACGTCCGGG CAGAAGGCAA chr5:139517839-139518339 - 55 1.84e-05 GCTGCTGAGA GCAGCGCCCTCTAGCGGAGGCC GGGCCTTGGC chr9:136109548-136110048 - 11 1.84e-05 TGTGGCGCGC ACTGCGCCTGGGGGCGGGGTTG CAGGCTGCTG chr16:66406446-66406946 + 29 2.20e-05 TCAGCCAGGG CCGGTGTCTGCGAGCTCCGCGG CCGGGCATCC chr12:53501377-53501877 - 17 2.40e-05 GAGGCAGCAG CCACTGCCCCGGTGCACGCCGG GAACCACTGC chr19:41859482-41859982 + 37 2.40e-05 AAGGGTGGGG CTTCCGTCTCCCGCTCTCGCGA CTCCTGGCGG chr10:6088647-6089147 + 70 2.62e-05 AGGGGAGCGT GCAGTGCGGTCCTCCcgcgggc agggggcag chr13:40770985-40771485 + 25 3.11e-05 CCCGCCCTCT CTTCCGCTTCCGGCCTGGCGCC TTCCTCCCCC chr1:212791596-212792096 + 74 3.11e-05 CAGCTGAAAC GTTCCGGCTCCGGCTCTGCTGG CCGGT chr1:206612236-206612736 - 68 3.11e-05 ACTGGGGGCG GCCGCGGCCTCCCCAGCGGCAA CGGCCACGAA chr19:44212431-44212931 + 50 3.38e-05 GGATGGAgag gtcgcggccgcggcggaggccg agaggccgag chr12:1605792-1606292 - 73 3.38e-05 CGGGCG GCAGCGTCCCGCCGAACGCGGA GTTCCAAATC chr19:41310105-41310605 + 12 3.67e-05 CAGGATGGAG GCCGTGGCGACGGCGACGGCGG CGAAGGAACC chr19:36114745-36115245 + 28 3.67e-05 CTGCGCACAC GTGCTGGCTCCCCGCCGCCTCG GGCTCGGCTC chr19:37467239-37467739 + 28 3.98e-05 TTCCCAGAGG CCTTCGCGGCCCTACTTCCCCG ACCCCACCTG chr10:47553294-47553794 - 43 4.31e-05 TTTTTGTTTC CCTCCGGCGAGTCGGCGCGAGG GTGAATTTCC chr3:131502770-131503270 + 49 4.31e-05 TTTACAATGA ACTCCGGGCACTCGAGTCGCTC CCCGGAAACT chr5:112160537-112161037 - 18 4.31e-05 ACCATCGGCC GCTGCGCTATGGCGAGACGCCG CCGTGTGGCC chr19:37370928-37371428 - 49 4.31e-05 CTGCAAACGG GCCCCGCGACCGAGACCCGCGA CGTCACCTCC chr16:67872808-67873308 + 45 4.31e-05 GGTTCCGGGA GCCTCGGCTCGTGGGTGCCGGA AGTGGAGGCG chr3:150603334-150603834 + 16 4.67e-05 CTGCTCGGCG CCATTGGCTACGCGAGGCCCCG GCTTCGCGGC chr17:44014787-44015287 - 14 4.67e-05 TGACCCGGAA GCTGCGTGTCCCATCCCCGCGC CTGCTTCTCT chr1:91885786-91886286 - 12 5.05e-05 GTGAGAGTCC CCAGCGGGTCCGGATGGCGTAG TTTTGCCGCG chr1:205122054-205122554 + 15 5.45e-05 TGTGTGTTCA GCGGCGTTGTCCGGGCGGGCTA CCTCAGACTC chr12:38316449-38316949 + 75 7.90e-05 AAACAGCGAC CCGCTGTTTTCCGGATCCGCGC TCTC chr19:36127649-36128149 - 37 8.48e-05 CAGCGTCTGA ACGGTGCGCTGCCGCCCCCTCG TGGCAGATGG chr7:102572357-102572857 + 46 9.10e-05 CTTCCGGATT ACTCCGGCGGGGCAAACCCGCG CAAGGATCGG chr17:32341942-32342442 + 74 9.10e-05 TATCAGGGCT CGTCCGGCTCCCGGCCCTCGCA CACCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCWSCGSCBYCBGGSSBCSSSG MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:107114161-107114661 4e-11 44_[+4]_34 chr12:8243257-8243757 5.2e-08 51_[-4]_27 chr9:11171-11671 9e-08 21_[+4]_57 chr19:5803915-5804415 9e-08 22_[-4]_56 chr15:72231097-72231597 1.3e-07 44_[-4]_34 chr19:4400471-4400971 1.3e-07 64_[+4]_14 chr1:211133946-211134446 1.5e-07 52_[+4]_26 chr22:41446598-41447098 2.1e-07 76_[+4]_2 chr15:73992119-73992619 2.4e-07 10_[-4]_68 chr21:44939702-44940202 2.4e-07 43_[+4]_35 chr1:228165605-228166105 2.4e-07 41_[+4]_37 chr7:141551093-141551593 2.9e-07 40_[-4]_38 chr19:17334562-17335062 3.3e-07 13_[+4]_65 chr17:50707682-50708182 3.3e-07 75_[+4]_3 chr1:147172322-147172822 3.9e-07 75_[+4]_3 chr13:36999140-36999640 3.9e-07 16_[-4]_62 chr1:244652957-244653457 4.5e-07 19_[+4]_59 chr8:13276305-13276805 4.5e-07 16_[+4]_62 chr16:667763-668263 4.5e-07 8_[+4]_70 chr10:93702411-93702911 5.2e-07 13_[+4]_65 chr19:33777972-33778472 5.2e-07 34_[+4]_44 chr4:82374296-82374796 9.1e-07 20_[-4]_58 chr5:116574634-116575134 9.1e-07 [-4]_78 chr1:225474842-225475342 1e-06 42_[-4]_36 chr1:27321856-27322356 1e-06 2_[-4]_76 chr19:33080883-33081383 1e-06 75_[-4]_3 chr1:1375033-1375533 1.2e-06 23_[+4]_55 chr1:235104085-235104585 1.2e-06 18_[-4]_60 chr3:53347431-53347931 1.4e-06 48_[+4]_30 chr2:223957177-223957677 1.7e-06 6_[+4]_72 chr14:90396755-90397255 2.2e-06 5_[-4]_73 chr1:54715562-54716062 2.2e-06 78_[-4] chr10:32346069-32346569 2.2e-06 16_[+4]_62 chr12:96906771-96907271 2.5e-06 78_[-4] chr6:143450468-143450968 2.8e-06 33_[-4]_45 chr1:26695414-26695914 2.8e-06 77_[-4]_1 chr3:14125641-14126141 3.6e-06 70_[+4]_8 chr19:40634430-40634930 3.6e-06 31_[-4]_47 chr4:4541838-4542338 3.6e-06 66_[+4]_12 chr10:101694078-10169457 4e-06 30_[+4]_48 chr5:173144210-173144710 4.5e-06 25_[-4]_53 chr17:18780985-18781485 5e-06 62_[+4]_16 chr8:94719569-94720069 6.2e-06 64_[+4]_14 chr15:65517496-65517996 6.2e-06 11_[-4]_67 chr17:39980637-39981137 6.9e-06 2_[+4]_76 chr8:37849673-37850173 6.9e-06 14_[+4]_64 chr10:120851006-12085150 7.7e-06 59_[-4]_19 chr19:1383558-1384058 7.7e-06 10_[-4]_68 chr5:96935739-96936239 7.7e-06 77_[+4]_1 chr1:93078913-93079413 8.5e-06 52_[-4]_26 chr17:63842515-63843015 8.5e-06 22_[+4]_56 chr10:22229084-22229584 1e-05 17_[+4]_61 chr1:155250604-155251104 1e-05 18_[-4]_60 chr15:65610930-65611430 1.1e-05 76_[-4]_2 chr1:227735098-227735598 1.1e-05 41_[-4]_37 chr1:163321601-163322101 1.1e-05 31_[+4]_47 chr17:18087620-18088120 1.3e-05 10_[-4]_68 chr1:234997177-234997677 1.4e-05 44_[-4]_34 chr12:103956950-10395745 1.4e-05 64_[-4]_14 chr3:188348599-188349099 1.5e-05 75_[+4]_3 chr5:40835068-40835568 1.7e-05 20_[+4]_58 chr1:224330206-224330706 1.7e-05 55_[-4]_23 chr19:58380514-58381014 1.7e-05 56_[-4]_22 chr17:42773135-42773635 1.8e-05 72_[-4]_6 chr5:139517839-139518339 1.8e-05 54_[-4]_24 chr9:136109548-136110048 1.8e-05 10_[-4]_68 chr16:66406446-66406946 2.2e-05 28_[+4]_50 chr12:53501377-53501877 2.4e-05 16_[-4]_62 chr19:41859482-41859982 2.4e-05 36_[+4]_42 chr10:6088647-6089147 2.6e-05 69_[+4]_9 chr13:40770985-40771485 3.1e-05 24_[+4]_54 chr1:212791596-212792096 3.1e-05 73_[+4]_5 chr1:206612236-206612736 3.1e-05 67_[-4]_11 chr19:44212431-44212931 3.4e-05 49_[+4]_29 chr12:1605792-1606292 3.4e-05 72_[-4]_6 chr19:41310105-41310605 3.7e-05 11_[+4]_67 chr19:36114745-36115245 3.7e-05 27_[+4]_51 chr19:37467239-37467739 4e-05 27_[+4]_51 chr10:47553294-47553794 4.3e-05 42_[-4]_36 chr3:131502770-131503270 4.3e-05 48_[+4]_30 chr5:112160537-112161037 4.3e-05 17_[-4]_61 chr19:37370928-37371428 4.3e-05 48_[-4]_30 chr16:67872808-67873308 4.3e-05 44_[+4]_34 chr3:150603334-150603834 4.7e-05 15_[+4]_63 chr17:44014787-44015287 4.7e-05 13_[-4]_65 chr1:91885786-91886286 5e-05 11_[-4]_67 chr1:205122054-205122554 5.5e-05 14_[+4]_64 chr12:38316449-38316949 7.9e-05 74_[+4]_4 chr19:36127649-36128149 8.5e-05 36_[-4]_42 chr7:102572357-102572857 9.1e-05 45_[+4]_33 chr17:32341942-32342442 9.1e-05 73_[+4]_5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCWSCGSCBYCBGGSSBCSSSG MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SCWSCGSCBYCBGGSSBCSSSG width=22 seqs=91 chr6:107114161-107114661 ( 45) GCTGCGCCCCCTGGCGGCGGGG 1 chr12:8243257-8243757 ( 52) GCTCCGCCTCCCAGAGTCCGCG 1 chr9:11171-11671 ( 22) CCACCGCCCCCTGCTGGCGCCG 1 chr19:5803915-5804415 ( 23) ACAGCGCTCCCTGGCGGCGCCG 1 chr15:72231097-72231597 ( 45) CCCGCGCGTTCCGCCGCCGCCG 1 chr19:4400471-4400971 ( 65) GCAGCGCCCCCTGGAGTCGTGG 1 chr1:211133946-211134446 ( 53) GCAGCGGCGCCTGGGCCGGCGG 1 chr22:41446598-41447098 ( 77) CCTCCGCCCTGCAGGGGCGGGG 1 chr15:73992119-73992619 ( 11) CCCGCGCCGCCGCGGGTGGCCG 1 chr21:44939702-44940202 ( 44) CCGGCGGCCGCGGGGCTCCCGG 1 chr1:228165605-228166105 ( 42) ACTCCGGGGCGCGGCGGCCCGG 1 chr7:141551093-141551593 ( 41) CCGCCGCCCTCGGGTTCCGCCG 1 chr19:17334562-17335062 ( 14) GCCGCGCCCGCCCGCGCCGGCC 1 chr17:50707682-50708182 ( 76) GCTCCGGCGCCCGGGCTGGCTG 1 chr1:147172322-147172822 ( 76) CCTGCGGCCTGCAGCCTCGGCG 1 chr13:36999140-36999640 ( 17) GCGGCGGGGCCGGGTCGCGCGG 1 chr1:244652957-244653457 ( 20) GCCCCGGCTGCCGCGGGCCGGG 1 chr8:13276305-13276805 ( 17) ACTGCGGCCCCGGGAAGCGCCA 1 chr16:667763-668263 ( 9) CCTGCGCTGTCCGCCGTGGCCG 1 chr10:93702411-93702911 ( 14) GCACCGTCCCCCGAGTGCGCCG 1 chr19:33777972-33778472 ( 35) GCAGCGGCTTGGGGATCCCCGG 1 chr4:82374296-82374796 ( 21) GCTGCGGCGCCTGGCGCTCCGC 1 chr5:116574634-116575134 ( 1) GCTCCGCCCGGGAGCGGCGGCC 1 chr1:225474842-225475342 ( 43) GCAGCGCCCTCTGCCGGCCGAC 1 chr1:27321856-27322356 ( 3) CCTCTGGGCCCGGCCAGCCCCG 1 chr19:33080883-33081383 ( 76) GCCCCGCCCCCTCGCTACGGCG 1 chr1:1375033-1375533 ( 24) ACAGCGCCCGCTGGCGTCCTCG 1 chr1:235104085-235104585 ( 19) CCCCCGGCCTCCGGGAGCCTCG 1 chr3:53347431-53347931 ( 49) GCTCCGGGCGCCGGGTTCCGGC 1 chr2:223957177-223957677 ( 7) GTTCCGCGTTCCGGGTTCCGGG 1 chr14:90396755-90397255 ( 6) CCTCCGCCGCGGCGGAGCCGCC 1 chr1:54715562-54716062 ( 79) GCGGCTCCTTCCGGCGGCGCGG 1 chr10:32346069-32346569 ( 17) CCTGCGCTCCCGGCCCGGGCAG 1 chr12:96906771-96907271 ( 79) ACTGCGGGCCGGGGCGGCCCTC 1 chr6:143450468-143450968 ( 34) CCGCCGCGTTCCGCTGCCCGCG 1 chr1:26695414-26695914 ( 78) CCAGCGCCGTCGCGGCCGCCTG 1 chr3:14125641-14126141 ( 71) GCAGCGCCTCCTACCAGGGCGC 1 chr19:40634430-40634930 ( 32) GCTGCGCCGGCGCGCGGTGGCC 1 chr4:4541838-4542338 ( 67) CCTGCGCCCTGCTACCGCGGCG 1 chr10:101694078-10169457 ( 31) GCGGCGCCCCGCCCTTTCCCGG 1 chr5:173144210-173144710 ( 26) GCAGCGCCCCCTAGAGACCGGC 1 chr17:18780985-18781485 ( 63) GCTGCGCTGACGTGGCTCCCGG 1 chr8:94719569-94720069 ( 65) CCTGCGGGGACGCGGTTGGCGG 1 chr15:65517496-65517996 ( 12) GCTGCGCCTTCGCCAGTCGGAA 1 chr17:39980637-39981137 ( 3) GCTCCGTCATCGTGCGGCCCGA 1 chr8:37849673-37850173 ( 15) CCCCCGTCTTCCGGCCAGCGCG 1 chr10:120851006-12085150 ( 60) GCTCCGGGTTCCACCGCTCCCG 1 chr19:1383558-1384058 ( 11) CCTCCGTGGTCGTGTTGCGCCG 1 chr5:96935739-96936239 ( 78) GGAGCGGCGCCGCCCCTCGCGG 1 chr1:93078913-93079413 ( 53) ACACCGCGCCCTGCGTCCCCGA 1 chr17:63842515-63843015 ( 23) GCTCTGTGCTCCGCGATCCGGG 1 chr10:22229084-22229584 ( 18) GCCGCGCTCACCTGCAGCCGGG 1 chr1:155250604-155251104 ( 19) ACAGCGCCCCCTGCCGCCCACA 1 chr15:65610930-65611430 ( 77) CCAGCGCGGAGTGCAGGCGCCG 1 chr1:227735098-227735598 ( 42) CCTGCGTCTTCTGGTTCCGAGG 1 chr1:163321601-163322101 ( 32) GTTCCGCCCTGCGCCCTGCCCC 1 chr17:18087620-18088120 ( 11) GTTCCGCCCGCTGGGCCGGCCA 1 chr1:234997177-234997677 ( 45) GCTCTGTCTCCTCGGATCCCTG 1 chr12:103956950-10395745 ( 65) CCGGTGCGGCCCCGGGTCCCTG 1 chr3:188348599-188349099 ( 76) ATAGCGGGGTCCGGGGGGCGGG 1 chr5:40835068-40835568 ( 21) GCAGCGTTCTCGAGCGTCCGTC 1 chr1:224330206-224330706 ( 56) ACAGCGTCTCCGCACACCGCGC 1 chr19:58380514-58381014 ( 57) GCTCCGGGTCCGGACCGGCCAC 1 chr17:42773135-42773635 ( 73) CCTTCGCTTCCGCACGTCCGGG 1 chr5:139517839-139518339 ( 55) GCAGCGCCCTCTAGCGGAGGCC 1 chr9:136109548-136110048 ( 11) ACTGCGCCTGGGGGCGGGGTTG 1 chr16:66406446-66406946 ( 29) CCGGTGTCTGCGAGCTCCGCGG 1 chr12:53501377-53501877 ( 17) CCACTGCCCCGGTGCACGCCGG 1 chr19:41859482-41859982 ( 37) CTTCCGTCTCCCGCTCTCGCGA 1 chr10:6088647-6089147 ( 70) GCAGTGCGGTCCTCCCGCGGGC 1 chr13:40770985-40771485 ( 25) CTTCCGCTTCCGGCCTGGCGCC 1 chr1:212791596-212792096 ( 74) GTTCCGGCTCCGGCTCTGCTGG 1 chr1:206612236-206612736 ( 68) GCCGCGGCCTCCCCAGCGGCAA 1 chr19:44212431-44212931 ( 50) GTCGCGGCCGCGGCGGAGGCCG 1 chr12:1605792-1606292 ( 73) GCAGCGTCCCGCCGAACGCGGA 1 chr19:41310105-41310605 ( 12) GCCGTGGCGACGGCGACGGCGG 1 chr19:36114745-36115245 ( 28) GTGCTGGCTCCCCGCCGCCTCG 1 chr19:37467239-37467739 ( 28) CCTTCGCGGCCCTACTTCCCCG 1 chr10:47553294-47553794 ( 43) CCTCCGGCGAGTCGGCGCGAGG 1 chr3:131502770-131503270 ( 49) ACTCCGGGCACTCGAGTCGCTC 1 chr5:112160537-112161037 ( 18) GCTGCGCTATGGCGAGACGCCG 1 chr19:37370928-37371428 ( 49) GCCCCGCGACCGAGACCCGCGA 1 chr16:67872808-67873308 ( 45) GCCTCGGCTCGTGGGTGCCGGA 1 chr3:150603334-150603834 ( 16) CCATTGGCTACGCGAGGCCCCG 1 chr17:44014787-44015287 ( 14) GCTGCGTGTCCCATCCCCGCGC 1 chr1:91885786-91886286 ( 12) CCAGCGGGTCCGGATGGCGTAG 1 chr1:205122054-205122554 ( 15) GCGGCGTTGTCCGGGCGGGCTA 1 chr12:38316449-38316949 ( 75) CCGCTGTTTTCCGGATCCGCGC 1 chr19:36127649-36128149 ( 37) ACGGTGCGCTGCCGCCCCCTCG 1 chr7:102572357-102572857 ( 46) ACTCCGGCGGGGCAAACCCGCG 1 chr17:32341942-32342442 ( 74) CGTCCGGCTCCCGGCCCTCGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCWSCGSCBYCBGGSSBCSSSG MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 10.5751 E= 8.1e-034 -81 49 101 -1315 -1315 181 -351 -134 8 -81 -92 89 -1315 70 113 -251 -1315 179 -1315 -92 -1315 -1315 198 -450 -1315 98 44 -60 -1315 130 8 -105 -292 70 1 30 -151 85 -92 40 -1315 166 -26 -1315 -1315 62 62 -11 -92 1 108 -151 -151 13 132 -450 -60 85 13 -118 -81 8 74 -51 -218 13 66 14 -450 149 -5 -251 -1315 95 104 -1315 -292 113 40 -151 -192 70 78 -134 -81 -19 135 -1315 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCWSCGSCBYCBGGSSBCSSSG MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 91 E= 8.1e-034 0.142857 0.351648 0.505495 0.000000 0.000000 0.879121 0.021978 0.098901 0.263736 0.142857 0.131868 0.461538 0.000000 0.406593 0.549451 0.043956 0.000000 0.868132 0.000000 0.131868 0.000000 0.000000 0.989011 0.010989 0.000000 0.494505 0.340659 0.164835 0.000000 0.615385 0.263736 0.120879 0.032967 0.406593 0.252747 0.307692 0.087912 0.450549 0.131868 0.329670 0.000000 0.791209 0.208791 0.000000 0.000000 0.384615 0.384615 0.230769 0.131868 0.252747 0.527473 0.087912 0.087912 0.274725 0.626374 0.010989 0.164835 0.450549 0.274725 0.109890 0.142857 0.263736 0.417582 0.175824 0.054945 0.274725 0.395604 0.274725 0.010989 0.703297 0.241758 0.043956 0.000000 0.483516 0.516484 0.000000 0.032967 0.549451 0.329670 0.087912 0.065934 0.406593 0.428571 0.098901 0.142857 0.219780 0.637363 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SCWSCGSCBYCBGGSSBCSSSG MEME-4 regular expression -------------------------------------------------------------------------------- [GC]C[TA][GC]CG[CG][CG][CTG][CT][CG][CGT][GC][GC][CG][GC][GCT][CG][GC][CG][GC][GC] -------------------------------------------------------------------------------- Time 2597.87 secs. ******************************************************************************** ******************************************************************************** MOTIF ATGACTCAS MEME-5 width = 9 sites = 67 llr = 653 E-value = 3.6e-018 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATGACTCAS MEME-5 Description -------------------------------------------------------------------------------- Simplified A 7::a:::a: pos.-specific C 2:::8:a:6 probability G 1:9:1:::4 matrix T :a1:1a::1 bits 2.0 * * *** 1.8 * * *** 1.6 * * *** 1.4 *** *** Relative 1.2 ******* Entropy 1.0 ******* (14.1 bits) 0.8 ******** 0.6 ********* 0.4 ********* 0.2 ********* 0.0 --------- Multilevel ATGACTCAC consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGACTCAS MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------- chr4:53011921-53012421 + 82 3.81e-06 CCGTGTTATA ATGACTCAC CCCTTGACAA chr7:99751548-99752048 - 50 3.81e-06 CCTCCCACCT ATGACTCAC TCCTCCACCC chr22:30017315-30017815 + 69 3.81e-06 ATCTAACAGA ATGACTCAC TTTCTTAGGC chr7:99699102-99699602 - 36 3.81e-06 CCTCCCTCCT ATGACTCAC TCCTCCACCC chr14:34081775-34082275 + 12 3.81e-06 AGAGGTATGC ATGACTCAC AGCCACTAAA chr1:77412411-77412911 + 33 3.81e-06 ATAAATGTTG ATGACTCAC CCAATAAATA chr8:29675473-29675973 - 55 3.81e-06 CCCACCACCC ATGACTCAC TCCAGAGGAT chr7:128523180-128523680 - 39 3.81e-06 GGAGCTGATG ATGACTCAC AATCCCTGCC chr10:104331421-10433192 - 8 3.81e-06 CAATTATCAA ATGACTCAC TTCCAGG chr8:10152240-10152740 + 12 3.81e-06 GGGCAGGAAG ATGACTCAC TAGATCTGAA chr7:112422833-112423333 + 47 7.63e-06 CGGGGGCAGG ATGACTCAG CACTTCCTAT chr1:34763451-34763951 - 24 7.63e-06 AGGGACCTGG ATGACTCAG TGACCTGCCC chr17:36133558-36134058 + 8 7.63e-06 tggtgga atgactcag atttttattc chr1:115668990-115669490 + 35 7.63e-06 aaaagcagGT ATGACTCAG CACTCTGGGA chr5:175809746-175810246 - 35 7.63e-06 TTCTCTGCGA ATGACTCAG CATCATAAAT chr1:156130149-156130649 - 37 7.63e-06 CACCCTTCCC ATGACTCAG GGCTCAGGAA chr1:234700197-234700697 + 2 7.63e-06 G ATGACTCAG AGGCATTATT chr10:5861247-5861747 + 23 7.63e-06 CCAGGGATGC ATGACTCAG TGGCCTTGAC chr5:62233352-62233852 + 43 7.63e-06 GACAAACAGG ATGACTCAG TAAGCCCTCT chr7:100247220-100247720 - 55 7.63e-06 CTTCTCAGAG ATGACTCAG CTACTCAGCT chr6:111591370-111591870 - 48 7.63e-06 GACACTGGCC ATGACTCAG ACAAATCAGA chr15:70271377-70271877 - 72 7.63e-06 ACTGAGCAGG ATGACTCAG ACCTTCATCC chr5:91314204-91314704 + 43 7.63e-06 CCAGAGCAGG ATGACTCAG CAGCCGGAGG chr1:46522108-46522608 + 10 1.14e-05 TTtctagca ctgactcac tgtggactat chr4:158805594-158806094 - 54 1.14e-05 GCAGCTTGGA CTGACTCAC TCCATCTGTG chr1:225508475-225508975 + 37 1.14e-05 CTAATCTGGG CTGACTCAC TGATGCTGTC chr16:15021454-15021954 + 30 1.14e-05 TGTCCTGCTG CTGACTCAC AGGCTAATAA chr19:40715631-40716131 + 79 1.14e-05 CCACAACAGG CTGACTCAC CCACTTCTCA chr8:37538793-37539293 + 36 1.14e-05 AGACACATAA CTGACTCAC ATTAAGACAA chr17:73474227-73474727 + 45 1.14e-05 CTGTGCAGGG CTGACTCAC AACTGGCCAC chr17:1080693-1081193 - 60 1.14e-05 GCTTCTCATC CTGACTCAC TCGATGACGT chr5:37668444-37668944 + 30 1.53e-05 TATTCTGCCT GTGACTCAC ACATCTAAGT chr17:40314533-40315033 - 53 1.53e-05 TGCCAGGGCA GTGACTCAC CTACCGAGAA chr7:95549679-95550179 - 18 1.53e-05 CTTGGAGCTA GTGACTCAC TCCCTGCTCG chr19:36070361-36070861 + 34 1.53e-05 GCCTGCCTTT GTGACTCAC TCTGGAGATC chr5:177546330-177546830 + 10 2.67e-05 CAACATGCT ATGAGTCAC TCTGAGCCAC chr10:87586164-87586664 - 24 2.67e-05 GGAAGGTCTT ATGACTCAT GGCTACATTC chr8:7109180-7109680 + 75 2.67e-05 TGCTGAAGGC ATGACTCAT CTTCCATTCC chr5:174371533-174372033 - 60 2.67e-05 CAACGACCAA ATGACTCAT TCTCTAAAGA chr1:68384298-68384798 - 10 2.67e-05 TTTCAAACAT ATGAGTCAC CACACAAGT chr5:61328038-61328538 + 86 2.67e-05 GTGATGTGAT ATGAGTCAC TGCATA chr19:11094931-11095431 - 81 2.67e-05 AAAGGAGGAA ATGACTCAT TTCTTGTGCT chr21:37032889-37033389 - 4 2.67e-05 TTCTGCAAAA ATGAGTCAC GCA chr1:225746707-225747207 - 88 2.67e-05 AGGG CTGACTCAG ACAGCAGTTT chr10:31646516-31647016 + 5 2.67e-05 ttat atgagtcac ccttgtcttt chr5:142223565-142224065 - 56 2.67e-05 GATTACAGGC ATGAGTCAC CATTGGCACC chr17:45320842-45321342 - 42 2.67e-05 CCACATTCAG ATGACTCAT CAGCCACTTT chr1:232704735-232705235 + 48 3.05e-05 CAGCTGCTAA GTGACTCAG CACTGCATCA chr6:31777110-31777610 + 51 3.05e-05 AGTAAGCAGC GTGACTCAG GCCTGGCACA chr1:230104614-230105114 - 33 3.05e-05 TAAGTCAGCT GTGACTCAG CCTGGCAAGG chr10:18607480-18607980 + 7 3.05e-05 ctgctg gtgactcag atgcagatct chr18:48998056-48998556 + 35 3.05e-05 GACATCCGTA GTGACTCAG GGCCCTGGAC chr19:11344360-11344860 - 70 3.05e-05 CCAAGCTGTG GTGACTCAG CTGAGCTGGC chr16:69073279-69073779 - 70 3.43e-05 TTGCCTCATG ATTACTCAC TCATTCAATA chr18:48901926-48902426 - 47 3.43e-05 GTCCTCACGC ATTACTCAC TGGCGGGGCG chr10:6141072-6141572 - 81 3.43e-05 TACTTTCATT ATTACTCAC CAAACTTGCA chr8:16825905-16826405 + 86 3.81e-05 ATTCAAATAG ATGAGTCAG TACTCC chr1:199490764-199491264 + 56 3.81e-05 cagaagctgc atgagtcag taattgacag chr7:69609969-69610469 - 63 4.20e-05 AGATCTAAAG ATTACTCAG CCCCTTTGTC chr5:124908556-124909056 - 15 4.58e-05 AATGAAGTTA ATGATTCAC ATGACAGTTA chr19:41501316-41501816 + 34 4.58e-05 gggatggatg atgattcac cctgtattgg chr2:58042470-58042970 - 78 4.58e-05 CAGGCTATGA ATGATTCAC CACAAATACA chr10:101438722-10143922 - 39 4.96e-05 CACCAAAATC ATGATTCAG TTTTATAATC chr1:228861086-228861586 - 26 6.87e-05 CTCTGCACTA CTTACTCAC CCAGTGCTTA chr16:75305374-75305874 + 27 6.87e-05 aaagcaaatg cttactcac aggctgtggt chr19:18349515-18350015 + 68 9.54e-05 CCAAACAGAG ATTACTCAT TCTTTTAAAT chr8:37229054-37229554 - 22 9.54e-05 AATGAACTTC ATTAGTCAC TAACCCAAGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGACTCAS MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:53011921-53012421 3.8e-06 81_[+5]_10 chr7:99751548-99752048 3.8e-06 49_[-5]_42 chr22:30017315-30017815 3.8e-06 68_[+5]_23 chr7:99699102-99699602 3.8e-06 35_[-5]_56 chr14:34081775-34082275 3.8e-06 11_[+5]_80 chr1:77412411-77412911 3.8e-06 32_[+5]_59 chr8:29675473-29675973 3.8e-06 54_[-5]_37 chr7:128523180-128523680 3.8e-06 38_[-5]_53 chr10:104331421-10433192 3.8e-06 7_[-5]_84 chr8:10152240-10152740 3.8e-06 11_[+5]_80 chr7:112422833-112423333 7.6e-06 46_[+5]_45 chr1:34763451-34763951 7.6e-06 23_[-5]_68 chr17:36133558-36134058 7.6e-06 7_[+5]_84 chr1:115668990-115669490 7.6e-06 34_[+5]_57 chr5:175809746-175810246 7.6e-06 34_[-5]_57 chr1:156130149-156130649 7.6e-06 36_[-5]_55 chr1:234700197-234700697 7.6e-06 1_[+5]_90 chr10:5861247-5861747 7.6e-06 22_[+5]_69 chr5:62233352-62233852 7.6e-06 42_[+5]_49 chr7:100247220-100247720 7.6e-06 54_[-5]_37 chr6:111591370-111591870 7.6e-06 47_[-5]_44 chr15:70271377-70271877 7.6e-06 71_[-5]_20 chr5:91314204-91314704 7.6e-06 42_[+5]_49 chr1:46522108-46522608 1.1e-05 9_[+5]_82 chr4:158805594-158806094 1.1e-05 53_[-5]_38 chr1:225508475-225508975 1.1e-05 36_[+5]_55 chr16:15021454-15021954 1.1e-05 29_[+5]_62 chr19:40715631-40716131 1.1e-05 78_[+5]_13 chr8:37538793-37539293 1.1e-05 35_[+5]_56 chr17:73474227-73474727 1.1e-05 44_[+5]_47 chr17:1080693-1081193 1.1e-05 59_[-5]_32 chr5:37668444-37668944 1.5e-05 29_[+5]_62 chr17:40314533-40315033 1.5e-05 52_[-5]_39 chr7:95549679-95550179 1.5e-05 17_[-5]_74 chr19:36070361-36070861 1.5e-05 33_[+5]_58 chr5:177546330-177546830 2.7e-05 9_[+5]_82 chr10:87586164-87586664 2.7e-05 23_[-5]_68 chr8:7109180-7109680 2.7e-05 74_[+5]_17 chr5:174371533-174372033 2.7e-05 59_[-5]_32 chr1:68384298-68384798 2.7e-05 9_[-5]_82 chr5:61328038-61328538 2.7e-05 85_[+5]_6 chr19:11094931-11095431 2.7e-05 80_[-5]_11 chr21:37032889-37033389 2.7e-05 3_[-5]_88 chr1:225746707-225747207 2.7e-05 87_[-5]_4 chr10:31646516-31647016 2.7e-05 4_[+5]_87 chr5:142223565-142224065 2.7e-05 55_[-5]_36 chr17:45320842-45321342 2.7e-05 41_[-5]_50 chr1:232704735-232705235 3.1e-05 47_[+5]_44 chr6:31777110-31777610 3.1e-05 50_[+5]_41 chr1:230104614-230105114 3.1e-05 32_[-5]_59 chr10:18607480-18607980 3.1e-05 6_[+5]_85 chr18:48998056-48998556 3.1e-05 34_[+5]_57 chr19:11344360-11344860 3.1e-05 69_[-5]_22 chr16:69073279-69073779 3.4e-05 69_[-5]_22 chr18:48901926-48902426 3.4e-05 46_[-5]_45 chr10:6141072-6141572 3.4e-05 80_[-5]_11 chr8:16825905-16826405 3.8e-05 85_[+5]_6 chr1:199490764-199491264 3.8e-05 55_[+5]_36 chr7:69609969-69610469 4.2e-05 62_[-5]_29 chr5:124908556-124909056 4.6e-05 14_[-5]_77 chr19:41501316-41501816 4.6e-05 33_[+5]_58 chr2:58042470-58042970 4.6e-05 77_[-5]_14 chr10:101438722-10143922 5e-05 38_[-5]_53 chr1:228861086-228861586 6.9e-05 25_[-5]_66 chr16:75305374-75305874 6.9e-05 26_[+5]_65 chr19:18349515-18350015 9.5e-05 67_[+5]_24 chr8:37229054-37229554 9.5e-05 21_[-5]_70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGACTCAS MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATGACTCAS width=9 seqs=67 chr4:53011921-53012421 ( 82) ATGACTCAC 1 chr7:99751548-99752048 ( 50) ATGACTCAC 1 chr22:30017315-30017815 ( 69) ATGACTCAC 1 chr7:99699102-99699602 ( 36) ATGACTCAC 1 chr14:34081775-34082275 ( 12) ATGACTCAC 1 chr1:77412411-77412911 ( 33) ATGACTCAC 1 chr8:29675473-29675973 ( 55) ATGACTCAC 1 chr7:128523180-128523680 ( 39) ATGACTCAC 1 chr10:104331421-10433192 ( 8) ATGACTCAC 1 chr8:10152240-10152740 ( 12) ATGACTCAC 1 chr7:112422833-112423333 ( 47) ATGACTCAG 1 chr1:34763451-34763951 ( 24) ATGACTCAG 1 chr17:36133558-36134058 ( 8) ATGACTCAG 1 chr1:115668990-115669490 ( 35) ATGACTCAG 1 chr5:175809746-175810246 ( 35) ATGACTCAG 1 chr1:156130149-156130649 ( 37) ATGACTCAG 1 chr1:234700197-234700697 ( 2) ATGACTCAG 1 chr10:5861247-5861747 ( 23) ATGACTCAG 1 chr5:62233352-62233852 ( 43) ATGACTCAG 1 chr7:100247220-100247720 ( 55) ATGACTCAG 1 chr6:111591370-111591870 ( 48) ATGACTCAG 1 chr15:70271377-70271877 ( 72) ATGACTCAG 1 chr5:91314204-91314704 ( 43) ATGACTCAG 1 chr1:46522108-46522608 ( 10) CTGACTCAC 1 chr4:158805594-158806094 ( 54) CTGACTCAC 1 chr1:225508475-225508975 ( 37) CTGACTCAC 1 chr16:15021454-15021954 ( 30) CTGACTCAC 1 chr19:40715631-40716131 ( 79) CTGACTCAC 1 chr8:37538793-37539293 ( 36) CTGACTCAC 1 chr17:73474227-73474727 ( 45) CTGACTCAC 1 chr17:1080693-1081193 ( 60) CTGACTCAC 1 chr5:37668444-37668944 ( 30) GTGACTCAC 1 chr17:40314533-40315033 ( 53) GTGACTCAC 1 chr7:95549679-95550179 ( 18) GTGACTCAC 1 chr19:36070361-36070861 ( 34) GTGACTCAC 1 chr5:177546330-177546830 ( 10) ATGAGTCAC 1 chr10:87586164-87586664 ( 24) ATGACTCAT 1 chr8:7109180-7109680 ( 75) ATGACTCAT 1 chr5:174371533-174372033 ( 60) ATGACTCAT 1 chr1:68384298-68384798 ( 10) ATGAGTCAC 1 chr5:61328038-61328538 ( 86) ATGAGTCAC 1 chr19:11094931-11095431 ( 81) ATGACTCAT 1 chr21:37032889-37033389 ( 4) ATGAGTCAC 1 chr1:225746707-225747207 ( 88) CTGACTCAG 1 chr10:31646516-31647016 ( 5) ATGAGTCAC 1 chr5:142223565-142224065 ( 56) ATGAGTCAC 1 chr17:45320842-45321342 ( 42) ATGACTCAT 1 chr1:232704735-232705235 ( 48) GTGACTCAG 1 chr6:31777110-31777610 ( 51) GTGACTCAG 1 chr1:230104614-230105114 ( 33) GTGACTCAG 1 chr10:18607480-18607980 ( 7) GTGACTCAG 1 chr18:48998056-48998556 ( 35) GTGACTCAG 1 chr19:11344360-11344860 ( 70) GTGACTCAG 1 chr16:69073279-69073779 ( 70) ATTACTCAC 1 chr18:48901926-48902426 ( 47) ATTACTCAC 1 chr10:6141072-6141572 ( 81) ATTACTCAC 1 chr8:16825905-16826405 ( 86) ATGAGTCAG 1 chr1:199490764-199491264 ( 56) ATGAGTCAG 1 chr7:69609969-69610469 ( 63) ATTACTCAG 1 chr5:124908556-124909056 ( 15) ATGATTCAC 1 chr19:41501316-41501816 ( 34) ATGATTCAC 1 chr2:58042470-58042970 ( 78) ATGATTCAC 1 chr10:101438722-10143922 ( 39) ATGATTCAG 1 chr1:228861086-228861586 ( 26) CTTACTCAC 1 chr16:75305374-75305874 ( 27) CTTACTCAC 1 chr19:18349515-18350015 ( 68) ATTACTCAT 1 chr8:37229054-37229554 ( 22) ATTAGTCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGACTCAS MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 9 n= 55108 bayes= 10.4636 E= 3.6e-018 146 -61 -75 -1271 -1271 -1271 -1271 200 -1271 -1271 181 -106 200 -1271 -1271 -1271 -1271 169 -90 -206 -1271 -1271 -1271 200 -1271 200 -1271 -1271 200 -1271 -1271 -1271 -1271 114 52 -148 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGACTCAS MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 9 nsites= 67 E= 3.6e-018 0.686567 0.164179 0.149254 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.880597 0.119403 1.000000 0.000000 0.000000 0.000000 0.000000 0.805970 0.134328 0.059701 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.552239 0.358209 0.089552 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATGACTCAS MEME-5 regular expression -------------------------------------------------------------------------------- ATGACTCA[CG] -------------------------------------------------------------------------------- Time 3187.28 secs. ******************************************************************************** ******************************************************************************** MOTIF CCASHAGRKGGCRSHR MEME-6 width = 16 sites = 40 llr = 477 E-value = 6.8e-017 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCASHAGRKGGCRSHR MEME-6 Description -------------------------------------------------------------------------------- Simplified A 1:8128:4:::15134 pos.-specific C 9a:641::1::9:631 probability G ::2311a65aa:6315 matrix T ::1:4:::41:1::4: bits 2.0 * 1.8 * * ** 1.6 * * ** 1.4 * * ** Relative 1.2 ** * *** Entropy 1.0 *** *** **** (17.2 bits) 0.8 *** ********* 0.6 **** ********* * 0.4 **** ********* * 0.2 **************** 0.0 ---------------- Multilevel CCACCAGGGGGCGCTG consensus GT AT AGCA sequence A A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCASHAGRKGGCRSHR MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr19:40634430-40634930 - 63 7.45e-09 CGAGCATCGG CCACTAGGGGGCGCAG CCGGCTTGGG chr3:87298086-87298586 + 14 2.98e-08 TTTAATTACA CCAGCAGGTGGCACTA TGATACACTG chr12:52980742-52981242 - 47 4.26e-08 ACCTAGAAGG CCACCAGGGGGCAGAG GGAGGCAAGA chr12:57782453-57782953 + 27 5.73e-08 GTTCCTCCGG CCAGCAGGTGGCACCA TACTCGTTTG chr1:200510053-200510553 - 55 6.61e-08 TTCACATTGG CCACTAGATGGCAGTG TCTCACAGGA chr15:66498750-66499250 - 61 1.05e-07 TTAACTTTAA CCACAAGAGGGCACAA CTGGAGAGCA chr19:18349515-18350015 + 2 1.31e-07 c ccAGAAGGTGGCACAG TCTCGCCACG chr17:66715685-66716185 + 8 1.31e-07 CTGAATA CCACAAGAGGGCAGTA AAGATTTGCA chr1:235104085-235104585 + 72 2.17e-07 CCTAGGATCG CCGCCAGAGGGCGCCA GCGCGCTCCT chr17:18625538-18626038 + 35 2.82e-07 GACTCCTTGG CCTGCAGGTGGCGCTG TAGCTCCAGC chr6:118800479-118800979 - 6 3.65e-07 CTGCTTCCCA CCACTAGGGGGCAGGA AGTAT chr5:66757140-66757640 - 75 3.65e-07 AAATCTGCAG CCACAAGGTGGCAATG TGCCATAGAC chr6:155177323-155177823 + 28 4.10e-07 AGCTTTTAGA CCACCAGGTGGTGCAG TAGAGCTTAA chr17:40560190-40560690 - 53 4.67e-07 AGGGAGGCTT CCAGCAGGTGGTGCTG TGGCCAAGGA chr19:33777972-33778472 + 62 5.21e-07 CCCGGCGGGG CCGCCAGGTGGCAGCA GCGCTCTGGC chr15:38354223-38354723 - 83 5.84e-07 AT CCAGTAGGTGGTGCTG AAGCTCCACA chr2:55014920-55015420 + 18 5.84e-07 TCCATCTGCA ACACTAGATGGCACCA ACACCCGTAG chr7:102572357-102572857 - 80 7.19e-07 CCAGC CCAACAGGGGGCGATG AGCCGATCCT chr22:32473225-32473725 - 84 7.19e-07 C CCAATAGGTGGCAGCA CTTGTCCACA chr17:43483578-43484078 + 27 7.94e-07 ATTTTTCTCG CCTGTAGAGGGCGCAG ATCGGCGTGC chr14:49861970-49862470 + 80 7.94e-07 TGAATATGCG CCGGTAGGGGGCAGCG ATGAG chr1:25998096-25998596 - 7 8.72e-07 CCTCTTCAGG CCACCAGGGGGAGGAA TCACAC chr19:36114745-36115245 + 2 1.15e-06 G CCAAAAGAGGGCGGAG CTGCGCACAC chr3:194350134-194350634 - 57 1.37e-06 GAATCTGATC CCAGCTGGGGGCACTG GCGGAGCTAA chr19:38962041-38962541 + 41 1.97e-06 taagtttttt tcagtagagggcgctg gagagacgtt chr5:66307587-66308087 + 57 2.36e-06 ATATCTGCCA CCACTAGATGTCACTA GATATCAAGC chr13:36999140-36999640 - 63 2.57e-06 CTCCGCCTCG CCACGCGGGGGCGCTG CGGCCAGCGG chr9:40991916-40992416 + 45 3.06e-06 CTCAGGGGCT CCTCGAGAGGGCGCCA GGGAGCAGAT chr12:10750036-10750536 - 40 3.06e-06 CCCAAGAAAT CCACAGGGTGGCGATA ACACTGAACG chr2:25991507-25992007 + 5 5.31e-06 TTTG CCAGCAGAGGGAGACA TGACTATGTG chr5:178279862-178280362 + 73 5.31e-06 CGGCCAGGGA ACACTAGAGGGCGCGC TTGACCTGCC chr10:32346069-32346569 - 64 5.31e-06 TCTCCGTGGG CCGCTGGGTGGCGCTC CAGGGCCACT chr15:65517496-65517996 - 80 5.31e-06 TCCGG CCACTAGACTGCGCTG TGGTGTTGGA chr5:43609690-43610190 - 66 6.14e-06 TGCAGAACAG ACTGTAGGGGGCAGAG GTAAAAAGCA chr1:227762367-227762867 + 30 6.14e-06 GCACGTGTGG CCACAGGGTGGCAGCC TCGCGACACC chr8:37849673-37850173 - 50 6.60e-06 GCGCAGCCTC CCAGCGGAGGGAACCG CCTATGCCTC chr1:226547613-226548113 + 49 7.08e-06 CCCATTATTA ACGCCAGACGGCGCTG TGTCCTCACT chr1:234997177-234997677 + 4 8.74e-06 AGG ACACCACAGGGCGCCA CGGGACATGG chr16:667763-668263 + 37 1.40e-05 GCCGGCGCGT CCACACGGTGGCGCGC CGCACAGCCT chr11:62653127-62653627 - 63 1.91e-05 CTCTGGGACT CCGACAGGGTGCGGAA CTAATGTAAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCASHAGRKGGCRSHR MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:40634430-40634930 7.5e-09 62_[-6]_22 chr3:87298086-87298586 3e-08 13_[+6]_71 chr12:52980742-52981242 4.3e-08 46_[-6]_38 chr12:57782453-57782953 5.7e-08 26_[+6]_58 chr1:200510053-200510553 6.6e-08 54_[-6]_30 chr15:66498750-66499250 1.1e-07 60_[-6]_24 chr19:18349515-18350015 1.3e-07 1_[+6]_83 chr17:66715685-66716185 1.3e-07 7_[+6]_77 chr1:235104085-235104585 2.2e-07 71_[+6]_13 chr17:18625538-18626038 2.8e-07 34_[+6]_50 chr6:118800479-118800979 3.6e-07 5_[-6]_79 chr5:66757140-66757640 3.6e-07 74_[-6]_10 chr6:155177323-155177823 4.1e-07 27_[+6]_57 chr17:40560190-40560690 4.7e-07 52_[-6]_32 chr19:33777972-33778472 5.2e-07 61_[+6]_23 chr15:38354223-38354723 5.8e-07 82_[-6]_2 chr2:55014920-55015420 5.8e-07 17_[+6]_67 chr7:102572357-102572857 7.2e-07 79_[-6]_5 chr22:32473225-32473725 7.2e-07 83_[-6]_1 chr17:43483578-43484078 7.9e-07 26_[+6]_58 chr14:49861970-49862470 7.9e-07 79_[+6]_5 chr1:25998096-25998596 8.7e-07 6_[-6]_78 chr19:36114745-36115245 1.1e-06 1_[+6]_83 chr3:194350134-194350634 1.4e-06 56_[-6]_28 chr19:38962041-38962541 2e-06 40_[+6]_44 chr5:66307587-66308087 2.4e-06 56_[+6]_28 chr13:36999140-36999640 2.6e-06 62_[-6]_22 chr9:40991916-40992416 3.1e-06 44_[+6]_40 chr12:10750036-10750536 3.1e-06 39_[-6]_45 chr2:25991507-25992007 5.3e-06 4_[+6]_80 chr5:178279862-178280362 5.3e-06 72_[+6]_12 chr10:32346069-32346569 5.3e-06 63_[-6]_21 chr15:65517496-65517996 5.3e-06 79_[-6]_5 chr5:43609690-43610190 6.1e-06 65_[-6]_19 chr1:227762367-227762867 6.1e-06 29_[+6]_55 chr8:37849673-37850173 6.6e-06 49_[-6]_35 chr1:226547613-226548113 7.1e-06 48_[+6]_36 chr1:234997177-234997677 8.7e-06 3_[+6]_81 chr16:667763-668263 1.4e-05 36_[+6]_48 chr11:62653127-62653627 1.9e-05 62_[-6]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCASHAGRKGGCRSHR MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCASHAGRKGGCRSHR width=16 seqs=40 chr19:40634430-40634930 ( 63) CCACTAGGGGGCGCAG 1 chr3:87298086-87298586 ( 14) CCAGCAGGTGGCACTA 1 chr12:52980742-52981242 ( 47) CCACCAGGGGGCAGAG 1 chr12:57782453-57782953 ( 27) CCAGCAGGTGGCACCA 1 chr1:200510053-200510553 ( 55) CCACTAGATGGCAGTG 1 chr15:66498750-66499250 ( 61) CCACAAGAGGGCACAA 1 chr19:18349515-18350015 ( 2) CCAGAAGGTGGCACAG 1 chr17:66715685-66716185 ( 8) CCACAAGAGGGCAGTA 1 chr1:235104085-235104585 ( 72) CCGCCAGAGGGCGCCA 1 chr17:18625538-18626038 ( 35) CCTGCAGGTGGCGCTG 1 chr6:118800479-118800979 ( 6) CCACTAGGGGGCAGGA 1 chr5:66757140-66757640 ( 75) CCACAAGGTGGCAATG 1 chr6:155177323-155177823 ( 28) CCACCAGGTGGTGCAG 1 chr17:40560190-40560690 ( 53) CCAGCAGGTGGTGCTG 1 chr19:33777972-33778472 ( 62) CCGCCAGGTGGCAGCA 1 chr15:38354223-38354723 ( 83) CCAGTAGGTGGTGCTG 1 chr2:55014920-55015420 ( 18) ACACTAGATGGCACCA 1 chr7:102572357-102572857 ( 80) CCAACAGGGGGCGATG 1 chr22:32473225-32473725 ( 84) CCAATAGGTGGCAGCA 1 chr17:43483578-43484078 ( 27) CCTGTAGAGGGCGCAG 1 chr14:49861970-49862470 ( 80) CCGGTAGGGGGCAGCG 1 chr1:25998096-25998596 ( 7) CCACCAGGGGGAGGAA 1 chr19:36114745-36115245 ( 2) CCAAAAGAGGGCGGAG 1 chr3:194350134-194350634 ( 57) CCAGCTGGGGGCACTG 1 chr19:38962041-38962541 ( 41) TCAGTAGAGGGCGCTG 1 chr5:66307587-66308087 ( 57) CCACTAGATGTCACTA 1 chr13:36999140-36999640 ( 63) CCACGCGGGGGCGCTG 1 chr9:40991916-40992416 ( 45) CCTCGAGAGGGCGCCA 1 chr12:10750036-10750536 ( 40) CCACAGGGTGGCGATA 1 chr2:25991507-25992007 ( 5) CCAGCAGAGGGAGACA 1 chr5:178279862-178280362 ( 73) ACACTAGAGGGCGCGC 1 chr10:32346069-32346569 ( 64) CCGCTGGGTGGCGCTC 1 chr15:65517496-65517996 ( 80) CCACTAGACTGCGCTG 1 chr5:43609690-43610190 ( 66) ACTGTAGGGGGCAGAG 1 chr1:227762367-227762867 ( 30) CCACAGGGTGGCAGCC 1 chr8:37849673-37850173 ( 50) CCAGCGGAGGGAACCG 1 chr1:226547613-226548113 ( 49) ACGCCAGACGGCGCTG 1 chr1:234997177-234997677 ( 4) ACACCACAGGGCGCCA 1 chr16:667763-668263 ( 37) CCACACGGTGGCGCGC 1 chr11:62653127-62653627 ( 63) CCGACAGGGTGCGGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCASHAGRKGGCRSHR MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 50915 bayes= 11.2567 E= 6.8e-017 -100 176 -1197 -332 -1197 200 -1197 -1197 159 -1197 -74 -132 -132 120 38 -1197 -32 68 -232 49 172 -232 -132 -332 -1197 -332 196 -1197 68 -1197 126 -1197 -1197 -232 107 77 -1197 -1197 192 -232 -1197 -1197 196 -332 -173 176 -1197 -173 85 -1197 114 -1197 -132 126 26 -1197 0 14 -174 68 68 -132 100 -1197 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCASHAGRKGGCRSHR MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 40 E= 6.8e-017 0.125000 0.850000 0.000000 0.025000 0.000000 1.000000 0.000000 0.000000 0.750000 0.000000 0.150000 0.100000 0.100000 0.575000 0.325000 0.000000 0.200000 0.400000 0.050000 0.350000 0.825000 0.050000 0.100000 0.025000 0.000000 0.025000 0.975000 0.000000 0.400000 0.000000 0.600000 0.000000 0.000000 0.050000 0.525000 0.425000 0.000000 0.000000 0.950000 0.050000 0.000000 0.000000 0.975000 0.025000 0.075000 0.850000 0.000000 0.075000 0.450000 0.000000 0.550000 0.000000 0.100000 0.600000 0.300000 0.000000 0.250000 0.275000 0.075000 0.400000 0.400000 0.100000 0.500000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCASHAGRKGGCRSHR MEME-6 regular expression -------------------------------------------------------------------------------- CCA[CG][CTA]AG[GA][GT]GGC[GA][CG][TCA][GA] -------------------------------------------------------------------------------- Time 3766.78 secs. ******************************************************************************** ******************************************************************************** MOTIF SAGAGATMTGTCACAATKYCCC MEME-7 width = 22 sites = 6 llr = 141 E-value = 6.1e+002 ******************************************************************************** -------------------------------------------------------------------------------- Motif SAGAGATMTGTCACAATKYCCC MEME-7 Description -------------------------------------------------------------------------------- Simplified A :a:a:a:7::::a:a822:::: pos.-specific C 7:2::::32::a:8::::78a8 probability G 3:8:8::::8:::2:2:5:::: matrix T ::::2:a:82a:::::8332:2 bits 2.0 * * ** *** * * 1.8 * * ** *** * * 1.6 * * ** *** * * 1.4 ****** ********* *** Relative 1.2 ****** ********* *** Entropy 1.0 ***************** **** (33.9 bits) 0.8 ***************** **** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel CAGAGATATGTCACAATGCCCC consensus G C TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGAGATMTGTCACAATKYCCC MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr14_GL000225v1_random: - 50 2.84e-13 GTGATCAGTG CAGAGATATGTCACAATGTCCC CTGTAGGCAG chr14_GL000225v1_random: - 67 1.19e-12 GTGATCAGTG CAGAGATATTTCACAATGCCCC CTTGGGCAGA chr14_GL000225v1_random: - 4 5.91e-12 GTGATCAGTG CAGAGATACGTCACAATACCCC CTG chr5:49599400-49599900 + 28 9.55e-12 gtgatcagtg cagagatatgtcacaaagctcc tgtaggcaga chrY:11327418-11327918 + 54 1.26e-11 gtgatcagtg gagatatctgtcacaattcccc tttaggcgca chr9:18394811-18395311 + 65 4.11e-10 CATTTTTCAG GACAGATCTGTCAGAGTTTCCT CTTGTTCTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGAGATMTGTCACAATKYCCC MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14_GL000225v1_random: 2.8e-13 49_[-7]_29 chr14_GL000225v1_random: 1.2e-12 66_[-7]_12 chr14_GL000225v1_random: 5.9e-12 3_[-7]_75 chr5:49599400-49599900 9.5e-12 27_[+7]_51 chrY:11327418-11327918 1.3e-11 53_[+7]_25 chr9:18394811-18395311 4.1e-10 64_[+7]_14 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGAGATMTGTCACAATKYCCC MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SAGAGATMTGTCACAATKYCCC width=22 seqs=6 chr14_GL000225v1_random: ( 50) CAGAGATATGTCACAATGTCCC 1 chr14_GL000225v1_random: ( 67) CAGAGATATTTCACAATGCCCC 1 chr14_GL000225v1_random: ( 4) CAGAGATACGTCACAATACCCC 1 chr5:49599400-49599900 ( 28) CAGAGATATGTCACAAAGCTCC 1 chrY:11327418-11327918 ( 54) GAGATATCTGTCACAATTCCCC 1 chr9:18394811-18395311 ( 65) GACAGATCTGTCAGAGTTTCCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGAGATMTGTCACAATKYCCC MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 13.3926 E= 6.1e+002 -923 141 41 -923 200 -923 -923 -923 -923 -59 173 -923 200 -923 -923 -923 -923 -923 173 -58 200 -923 -923 -923 -923 -923 -923 200 142 41 -923 -923 -923 -59 -923 174 -923 -923 173 -58 -923 -923 -923 200 -923 200 -923 -923 200 -923 -923 -923 -923 173 -59 -923 200 -923 -923 -923 174 -923 -59 -923 -58 -923 -923 174 -58 -923 100 42 -923 141 -923 42 -923 173 -923 -58 -923 200 -923 -923 -923 173 -923 -58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGAGATMTGTCACAATKYCCC MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 6 E= 6.1e+002 0.000000 0.666667 0.333333 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.166667 0.833333 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.833333 0.166667 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.666667 0.333333 0.000000 0.000000 0.000000 0.166667 0.000000 0.833333 0.000000 0.000000 0.833333 0.166667 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.833333 0.166667 0.000000 1.000000 0.000000 0.000000 0.000000 0.833333 0.000000 0.166667 0.000000 0.166667 0.000000 0.000000 0.833333 0.166667 0.000000 0.500000 0.333333 0.000000 0.666667 0.000000 0.333333 0.000000 0.833333 0.000000 0.166667 0.000000 1.000000 0.000000 0.000000 0.000000 0.833333 0.000000 0.166667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SAGAGATMTGTCACAATKYCCC MEME-7 regular expression -------------------------------------------------------------------------------- [CG]AGAGAT[AC]TGTCACAAT[GT][CT]CCC -------------------------------------------------------------------------------- Time 4338.80 secs. ******************************************************************************** ******************************************************************************** MOTIF GRKYSYKGGTTCGADTCCMVSC MEME-8 width = 22 sites = 16 llr = 247 E-value = 1.8e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRKYSYKGGTTCGADTCCMVSC MEME-8 Description -------------------------------------------------------------------------------- Simplified A 141::21::2::27311:34:: pos.-specific C ::1544::3::a12119a6238 probability G 8631614a8:::6:2::::361 matrix T 1:54:34::8a:2148::1111 bits 2.0 * ** * 1.8 * ** * 1.6 * ** ** 1.4 * *** ** Relative 1.2 * ***** ** * Entropy 1.0 ** * ***** *** * (22.3 bits) 0.8 ** ** ***** * **** ** 0.6 ** ** ****** * **** ** 0.4 ** ** ******** **** ** 0.2 ********************** 0.0 ---------------------- Multilevel GGTCGCGGGTTCGATTCCCAGC consensus AGTCTT C A AGC sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRKYSYKGGTTCGADTCCMVSC MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr17:8139226-8139726 - 33 3.57e-11 GTAAACAGGA GATCCTGGGTTCGAATCCCAGC GGTGCCTGAG chr16:22296968-22297468 + 25 7.81e-11 gtctcttcgg gggcgtgggttcgaatcccacc gctgccaGGG chr16:3152704-3153204 + 40 1.87e-10 ctaagccagg gattgtgggttcgagtcccacc cggggtaAAG chr14:20657252-20657752 - 19 1.30e-09 GACATCCTTA GGTCGCTGGTTCGATTCCAGCT CGAAGGAAGT chr1:161530916-161531416 + 40 2.79e-09 tccaagcagt tgacccgggttcgattcccggc caacgcaAGG chr6:28742721-28743221 - 38 2.14e-08 CGGATCAGAA GATTGAGGGTTCGAGTCCCTTC GTGGTCGTGT chr1:16545717-16546217 - 29 2.35e-08 CCCACGCGGG AGACCCGGGTTCAATTCCCGGC CAATGCAAGA chr1:161540074-161540574 + 12 3.10e-08 ttaaccgaaa ggttggtggttcgatcccaccc agggacgGAA chr6:26537338-26537838 + 4 3.39e-08 gaa gattccaggttcgactcctggc tggctcgGTG chr19:17334562-17335062 + 53 3.39e-08 TCGCTCGCCC GAGCGCTGCTTCTCGTCCCCGC CCGAGCCGAA chr6:27592572-27593072 - 56 7.24e-08 ATAACCCAGA GGTCGATGGATCGAAACCATCC TCTGCTAGGT chr5:32489811-32490311 + 50 9.17e-08 TCTCCCCTAC GGCTGCTGGTTCTAACCCAAGT TTATAACAGT chr5:157511503-157512003 + 76 4.06e-07 CCAGAGAAGT GGGCGTGGCTTCCCTTACCCGC CAG chr5:44808448-44808948 + 67 5.41e-07 AAGTAACCTA GGTGGCAGCATCTCCTCCCAGC GTCAGGTCTA chr1:212291404-212291904 + 3 7.09e-07 GA TACTCATGGTTCATTACCCAGC CTATTAACAT chr4:38620878-38621378 - 73 1.11e-06 AATGCT GGGTCTTGCATCATATCCAGGG TGTGGTGTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRKYSYKGGTTCGADTCCMVSC MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:8139226-8139726 3.6e-11 32_[-8]_46 chr16:22296968-22297468 7.8e-11 24_[+8]_54 chr16:3152704-3153204 1.9e-10 39_[+8]_39 chr14:20657252-20657752 1.3e-09 18_[-8]_60 chr1:161530916-161531416 2.8e-09 39_[+8]_39 chr6:28742721-28743221 2.1e-08 37_[-8]_41 chr1:16545717-16546217 2.4e-08 28_[-8]_50 chr1:161540074-161540574 3.1e-08 11_[+8]_67 chr6:26537338-26537838 3.4e-08 3_[+8]_75 chr19:17334562-17335062 3.4e-08 52_[+8]_26 chr6:27592572-27593072 7.2e-08 55_[-8]_23 chr5:32489811-32490311 9.2e-08 49_[+8]_29 chr5:157511503-157512003 4.1e-07 75_[+8]_3 chr5:44808448-44808948 5.4e-07 66_[+8]_12 chr1:212291404-212291904 7.1e-07 2_[+8]_76 chr4:38620878-38621378 1.1e-06 72_[-8]_6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRKYSYKGGTTCGADTCCMVSC MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRKYSYKGGTTCGADTCCMVSC width=22 seqs=16 chr17:8139226-8139726 ( 33) GATCCTGGGTTCGAATCCCAGC 1 chr16:22296968-22297468 ( 25) GGGCGTGGGTTCGAATCCCACC 1 chr16:3152704-3153204 ( 40) GATTGTGGGTTCGAGTCCCACC 1 chr14:20657252-20657752 ( 19) GGTCGCTGGTTCGATTCCAGCT 1 chr1:161530916-161531416 ( 40) TGACCCGGGTTCGATTCCCGGC 1 chr6:28742721-28743221 ( 38) GATTGAGGGTTCGAGTCCCTTC 1 chr1:16545717-16546217 ( 29) AGACCCGGGTTCAATTCCCGGC 1 chr1:161540074-161540574 ( 12) GGTTGGTGGTTCGATCCCACCC 1 chr6:26537338-26537838 ( 4) GATTCCAGGTTCGACTCCTGGC 1 chr19:17334562-17335062 ( 53) GAGCGCTGCTTCTCGTCCCCGC 1 chr6:27592572-27593072 ( 56) GGTCGATGGATCGAAACCATCC 1 chr5:32489811-32490311 ( 50) GGCTGCTGGTTCTAACCCAAGT 1 chr5:157511503-157512003 ( 76) GGGCGTGGCTTCCCTTACCCGC 1 chr5:44808448-44808948 ( 67) GGTGGCAGCATCTCCTCCCAGC 1 chr1:212291404-212291904 ( 3) TACTCATGGTTCATTACCCAGC 1 chr4:38620878-38621378 ( 73) GGGTCTTGCATCATATCCAGGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRKYSYKGGTTCGADTCCMVSC MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 12.8519 E= 1.8e+000 -200 -1064 170 -100 59 -1064 132 -1064 -100 -100 0 100 -1064 100 -200 81 -1064 58 132 -1064 -41 81 -200 32 -100 -1064 81 81 -1064 -1064 200 -1064 -1064 0 158 -1064 -41 -1064 -1064 170 -1064 -1064 -1064 200 -1064 200 -1064 -1064 -41 -200 117 -41 146 -42 -1064 -100 32 -100 -42 59 -100 -100 -1064 159 -200 190 -1064 -1064 -1064 200 -1064 -1064 32 132 -1064 -200 59 -42 32 -100 -1064 32 132 -200 -1064 170 -200 -100 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRKYSYKGGTTCGADTCCMVSC MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 16 E= 1.8e+000 0.062500 0.000000 0.812500 0.125000 0.375000 0.000000 0.625000 0.000000 0.125000 0.125000 0.250000 0.500000 0.000000 0.500000 0.062500 0.437500 0.000000 0.375000 0.625000 0.000000 0.187500 0.437500 0.062500 0.312500 0.125000 0.000000 0.437500 0.437500 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.750000 0.000000 0.187500 0.000000 0.000000 0.812500 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.187500 0.062500 0.562500 0.187500 0.687500 0.187500 0.000000 0.125000 0.312500 0.125000 0.187500 0.375000 0.125000 0.125000 0.000000 0.750000 0.062500 0.937500 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.312500 0.625000 0.000000 0.062500 0.375000 0.187500 0.312500 0.125000 0.000000 0.312500 0.625000 0.062500 0.000000 0.812500 0.062500 0.125000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRKYSYKGGTTCGADTCCMVSC MEME-8 regular expression -------------------------------------------------------------------------------- G[GA][TG][CT][GC][CT][GT]G[GC]TTCGA[TA]TCC[CA][AG][GC]C -------------------------------------------------------------------------------- Time 4896.77 secs. ******************************************************************************** ******************************************************************************** MOTIF SVSMGGVSVGGAARRGBBSCGG MEME-9 width = 22 sites = 42 llr = 479 E-value = 6.0e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif SVSMGGVSVGGAARRGBBSCGG MEME-9 Description -------------------------------------------------------------------------------- Simplified A 24:5::4122:7763:1:12:: pos.-specific C 33651225321:::21435632 probability G 533:974446933358234278 matrix T ::11::::1:::::::34:::: bits 2.0 1.8 1.6 1.4 * * * Relative 1.2 * *** * ** Entropy 1.0 ** *** * ** (16.5 bits) 0.8 * ** **** * ** 0.6 * **** ***** * **** 0.4 ******** ******* ***** 0.2 ******** ******* ***** 0.0 ---------------------- Multilevel GACAGGGCGGGAAAGGCTCCGG consensus CCGC CAGCA GGGA TGGAC sequence G C C GC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SVSMGGVSVGGAARRGBBSCGG MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr16:67872808-67873308 - 7 3.10e-09 AACCTGCCAG GGCCGGAGAAGAAAGGTTCCGG GCTGGG chr1:226939515-226940015 - 14 2.09e-08 AAAAAGCACT CCGAGGAGGGGAAACGCGGCGG GCAAGGCCGC chr1:206612236-206612736 + 13 4.05e-08 CCATGCTGGG GCCCGGCCGCGAAAAGGGCCCG GCTGGAAACC chr1:1375033-1375533 + 76 4.75e-08 GCTCAGGCCC CGCCGGGCCCGAAAGGCGACGG TTT chr10:93702411-93702911 + 73 6.46e-08 GGGAAACAAG GGCAGCGGGAGAAACGGCCCGG AAAGGG chr1:227735098-227735598 + 15 7.51e-08 TCCTCACTTC CGCCGGAGCGGAAACGGTGAGG ACCAGCCTCG chr15:74546102-74546602 + 21 1.53e-07 ATCCTGCCCT GACAGCGCTGGGAAAGTTCAGG CCCGAGGCGG chr10:22229084-22229584 + 44 1.53e-07 GCCGGGAGAG GACAGCGGGGGAGAGGAGGCCG CTCTGCACCG chr13:40770985-40771485 - 49 2.01e-07 CCCTGTAGCC CACCGGAGCGCAAAGGGGGAGG AAGGCGCCAG chr11:85628101-85628601 + 18 2.96e-07 CCATCTTTCC CGCAGGACGCGAAGAGATCAGG GAGCTAAGCT chr1:225474842-225475342 + 15 3.36e-07 ATCCCAAACT GAGAGGCCGGGAAAAGGCAAGG ACGCCCGTCG chr6:157323293-157323793 + 64 3.36e-07 AGCGAGAACC AGGCGGAGGAGAAAGGTTCCGC TACCGCCTCC chr15:75368373-75368873 + 67 3.36e-07 TCCGCTCCAC GGCAGGAAACCAAAGGTTCCGG CGTCCAGAGG chr1:205122054-205122554 + 42 4.84e-07 GGCTACCTCA GACTCCGCAGGAAAGGTTCCGG ACAAGTCCTG chr17:42388506-42389006 + 33 4.84e-07 CTCCCTCCGC CACAGCGAGGGAAGAGCCGAGG ACTTGGGCAC chr19:44259748-44260248 - 19 6.86e-07 GAGTCCAACG CCCAGGCCAGGAAAGCTCGCCG TAGATGCAGA chr19:48619126-48619626 - 47 7.68e-07 ACACGGCCTG GGTAGGGCCAGAGAGGCCCCCG ACGTGCTGGC chr1:179882492-179882992 + 62 1.19e-06 TGGGAAAACG AACCCGGCTAGAAGAGTTCCGG TCCGATTCTG chr9:105244178-105244678 + 26 1.79e-06 CGCAGCCTCT GACACGCGCGGAAGGGCCCGGC CTTGTTCTGG chr4:4541838-4542338 + 45 2.18e-06 CGGCAACGGC GACGCGAGAAGAAAGGTTCCGG CCTGCGCCCT chr12:109477284-10947778 - 61 2.91e-06 GAGCTTCTTC GCCCGGGAAGGAAAACTTCCCC ACACCTTGCC chr1:37989855-37990355 + 22 3.19e-06 CCAAAGTTCC GCGAGTGCCGGAAGTGCCCCGG GACTTAAGAA chr19:58380514-58381014 + 79 3.49e-06 GACCCGGAGC GCGAGGACCGGAAGTGCGCGGC chr10:101694078-10169457 + 65 3.82e-06 cgcggggccg gctcggggcggggagcgggcgg gcgagcggac chr8:94719569-94720069 + 7 4.18e-06 GCCCCG GCGCCCCAGCGAAACGCTCCGG CCGCTCCCCT chr5:112160537-112161037 - 54 4.56e-06 CCCACTGTCC GAGAGCGCGAGGGGGGAGCGGG CTGTACCATC chr19:41310105-41310605 + 69 4.97e-06 CTTGGTCACG CGCAGGCGGCGGGTGGGTGCGG TTGCGGTGTC chr15:73992119-73992619 + 33 5.42e-06 GCGGCGCGGG CGCAGGAAGAGGAGGCCGGCCG GGGCCCGCTT chr3:53347431-53347931 - 20 5.42e-06 AGCGTGCGCG CGGCGGACCAGAATGGCTGACG TACCGCCCTG chr5:140725986-140726486 - 39 5.42e-06 CTTCAGCAGT AAGAGGGCTGGAGAGCGCCCGC GGGTCTCGAA chr1:54715562-54716062 - 6 5.42e-06 CCTTGGGTTC CGCCGGCCTGGGGGCGTGGCCG GGCGT chr1:91885786-91886286 + 64 8.16e-06 GAGCTCCGGG AATCGCGCAGGGAAAGTGGCCG GGGCGCGAGA chr19:45078991-45079491 - 29 8.16e-06 TTCCGCCGGC GCCCCCGCTGCAGAGGCCCGGG CAGGCCGCAA chr12:34022168-34022668 - 62 8.83e-06 TGCTGGGAGA GCGCGGATCCGGAAAGATCGGG TCGCTGTTTC chr19:5803915-5804415 + 55 9.54e-06 GGGAGCGCGG AGCCGTCGGGGAGGAGCCCGGG TGGGTTTGGG chr19:1383558-1384058 - 44 1.03e-05 GGAAACCGGA ACCTGGAGCCGGGAGGTTCCGC TGCGCTTTCG chr12:103956950-10395745 + 33 1.03e-05 AGGGCGGACG GAGCGGACGGCGAGCAGGCCGG ACCCAAAATA chr1:93078913-93079413 - 76 1.11e-05 AGG GACTGCGCGGCGAGCGCGGAGG AACACCGCGC chr9:129334002-129334502 + 79 1.20e-05 CCCGGTCACC CAGAGGCTGGGAAGGACTGCCG chr16:690192-690692 - 6 1.71e-05 ACCACTTCCG GCGAGGGACGGGAAAGACAGCG GCTTC chr17:39980637-39981137 - 53 2.23e-05 TTAACCCTCG CACCGGGGACCAGGAGCCGAGC CGGGCCTGCA chr1:26695414-26695914 - 52 2.38e-05 CGCCTGGCAA ACCCGGAGTGGAGAGCGGAGCG GGCGCAGGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SVSMGGVSVGGAARRGBBSCGG MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:67872808-67873308 3.1e-09 6_[-9]_72 chr1:226939515-226940015 2.1e-08 13_[-9]_65 chr1:206612236-206612736 4.1e-08 12_[+9]_66 chr1:1375033-1375533 4.7e-08 75_[+9]_3 chr10:93702411-93702911 6.5e-08 72_[+9]_6 chr1:227735098-227735598 7.5e-08 14_[+9]_64 chr15:74546102-74546602 1.5e-07 20_[+9]_58 chr10:22229084-22229584 1.5e-07 43_[+9]_35 chr13:40770985-40771485 2e-07 48_[-9]_30 chr11:85628101-85628601 3e-07 17_[+9]_61 chr1:225474842-225475342 3.4e-07 14_[+9]_64 chr6:157323293-157323793 3.4e-07 63_[+9]_15 chr15:75368373-75368873 3.4e-07 66_[+9]_12 chr1:205122054-205122554 4.8e-07 41_[+9]_37 chr17:42388506-42389006 4.8e-07 32_[+9]_46 chr19:44259748-44260248 6.9e-07 18_[-9]_60 chr19:48619126-48619626 7.7e-07 46_[-9]_32 chr1:179882492-179882992 1.2e-06 61_[+9]_17 chr9:105244178-105244678 1.8e-06 25_[+9]_53 chr4:4541838-4542338 2.2e-06 44_[+9]_34 chr12:109477284-10947778 2.9e-06 60_[-9]_18 chr1:37989855-37990355 3.2e-06 21_[+9]_57 chr19:58380514-58381014 3.5e-06 78_[+9] chr10:101694078-10169457 3.8e-06 64_[+9]_14 chr8:94719569-94720069 4.2e-06 6_[+9]_72 chr5:112160537-112161037 4.6e-06 53_[-9]_25 chr19:41310105-41310605 5e-06 68_[+9]_10 chr15:73992119-73992619 5.4e-06 32_[+9]_46 chr3:53347431-53347931 5.4e-06 19_[-9]_59 chr5:140725986-140726486 5.4e-06 38_[-9]_40 chr1:54715562-54716062 5.4e-06 5_[-9]_73 chr1:91885786-91886286 8.2e-06 63_[+9]_15 chr19:45078991-45079491 8.2e-06 28_[-9]_50 chr12:34022168-34022668 8.8e-06 61_[-9]_17 chr19:5803915-5804415 9.5e-06 54_[+9]_24 chr19:1383558-1384058 1e-05 43_[-9]_35 chr12:103956950-10395745 1e-05 32_[+9]_46 chr1:93078913-93079413 1.1e-05 75_[-9]_3 chr9:129334002-129334502 1.2e-05 78_[+9] chr16:690192-690692 1.7e-05 5_[-9]_73 chr17:39980637-39981137 2.2e-05 52_[-9]_26 chr1:26695414-26695914 2.4e-05 51_[-9]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SVSMGGVSVGGAARRGBBSCGG MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SVSMGGVSVGGAARRGBBSCGG width=22 seqs=42 chr16:67872808-67873308 ( 7) GGCCGGAGAAGAAAGGTTCCGG 1 chr1:226939515-226940015 ( 14) CCGAGGAGGGGAAACGCGGCGG 1 chr1:206612236-206612736 ( 13) GCCCGGCCGCGAAAAGGGCCCG 1 chr1:1375033-1375533 ( 76) CGCCGGGCCCGAAAGGCGACGG 1 chr10:93702411-93702911 ( 73) GGCAGCGGGAGAAACGGCCCGG 1 chr1:227735098-227735598 ( 15) CGCCGGAGCGGAAACGGTGAGG 1 chr15:74546102-74546602 ( 21) GACAGCGCTGGGAAAGTTCAGG 1 chr10:22229084-22229584 ( 44) GACAGCGGGGGAGAGGAGGCCG 1 chr13:40770985-40771485 ( 49) CACCGGAGCGCAAAGGGGGAGG 1 chr11:85628101-85628601 ( 18) CGCAGGACGCGAAGAGATCAGG 1 chr1:225474842-225475342 ( 15) GAGAGGCCGGGAAAAGGCAAGG 1 chr6:157323293-157323793 ( 64) AGGCGGAGGAGAAAGGTTCCGC 1 chr15:75368373-75368873 ( 67) GGCAGGAAACCAAAGGTTCCGG 1 chr1:205122054-205122554 ( 42) GACTCCGCAGGAAAGGTTCCGG 1 chr17:42388506-42389006 ( 33) CACAGCGAGGGAAGAGCCGAGG 1 chr19:44259748-44260248 ( 19) CCCAGGCCAGGAAAGCTCGCCG 1 chr19:48619126-48619626 ( 47) GGTAGGGCCAGAGAGGCCCCCG 1 chr1:179882492-179882992 ( 62) AACCCGGCTAGAAGAGTTCCGG 1 chr9:105244178-105244678 ( 26) GACACGCGCGGAAGGGCCCGGC 1 chr4:4541838-4542338 ( 45) GACGCGAGAAGAAAGGTTCCGG 1 chr12:109477284-10947778 ( 61) GCCCGGGAAGGAAAACTTCCCC 1 chr1:37989855-37990355 ( 22) GCGAGTGCCGGAAGTGCCCCGG 1 chr19:58380514-58381014 ( 79) GCGAGGACCGGAAGTGCGCGGC 1 chr10:101694078-10169457 ( 65) GCTCGGGGCGGGGAGCGGGCGG 1 chr8:94719569-94720069 ( 7) GCGCCCCAGCGAAACGCTCCGG 1 chr5:112160537-112161037 ( 54) GAGAGCGCGAGGGGGGAGCGGG 1 chr19:41310105-41310605 ( 69) CGCAGGCGGCGGGTGGGTGCGG 1 chr15:73992119-73992619 ( 33) CGCAGGAAGAGGAGGCCGGCCG 1 chr3:53347431-53347931 ( 20) CGGCGGACCAGAATGGCTGACG 1 chr5:140725986-140726486 ( 39) AAGAGGGCTGGAGAGCGCCCGC 1 chr1:54715562-54716062 ( 6) CGCCGGCCTGGGGGCGTGGCCG 1 chr1:91885786-91886286 ( 64) AATCGCGCAGGGAAAGTGGCCG 1 chr19:45078991-45079491 ( 29) GCCCCCGCTGCAGAGGCCCGGG 1 chr12:34022168-34022668 ( 62) GCGCGGATCCGGAAAGATCGGG 1 chr19:5803915-5804415 ( 55) AGCCGTCGGGGAGGAGCCCGGG 1 chr19:1383558-1384058 ( 44) ACCTGGAGCCGGGAGGTTCCGC 1 chr12:103956950-10395745 ( 33) GAGCGGACGGCGAGCAGGCCGG 1 chr1:93078913-93079413 ( 76) GACTGCGCGGCGAGCGCGGAGG 1 chr9:129334002-129334502 ( 79) CAGAGGCTGGGAAGGACTGCCG 1 chr16:690192-690692 ( 6) GCGAGGGACGGGAAAGACAGCG 1 chr17:39980637-39981137 ( 53) CACCGGGGACCAGGAGCCGAGC 1 chr1:26695414-26695914 ( 52) ACCCGGAGTGGAGAGCGGAGCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SVSMGGVSVGGAARRGBBSCGG MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 11.9938 E= 6.0e+001 -58 31 107 -1204 61 31 31 -1204 -1204 131 31 -180 86 85 -339 -180 -1204 -81 178 -1204 -1204 -7 151 -239 52 -22 78 -1204 -81 85 51 -239 -39 19 61 -81 -22 -22 119 -1204 -1204 -81 178 -1204 152 -1204 19 -1204 152 -1204 19 -1204 131 -1204 41 -239 19 -59 100 -239 -239 -81 169 -1204 -107 51 -7 19 -1204 19 41 61 -139 113 51 -1204 -22 125 -39 -1204 -1204 19 151 -1204 -1204 -59 173 -1204 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SVSMGGVSVGGAARRGBBSCGG MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 42 E= 6.0e+001 0.166667 0.309524 0.523810 0.000000 0.380952 0.309524 0.309524 0.000000 0.000000 0.619048 0.309524 0.071429 0.452381 0.452381 0.023810 0.071429 0.000000 0.142857 0.857143 0.000000 0.000000 0.238095 0.714286 0.047619 0.357143 0.214286 0.428571 0.000000 0.142857 0.452381 0.357143 0.047619 0.190476 0.285714 0.380952 0.142857 0.214286 0.214286 0.571429 0.000000 0.000000 0.142857 0.857143 0.000000 0.714286 0.000000 0.285714 0.000000 0.714286 0.000000 0.285714 0.000000 0.619048 0.000000 0.333333 0.047619 0.285714 0.166667 0.500000 0.047619 0.047619 0.142857 0.809524 0.000000 0.119048 0.357143 0.238095 0.285714 0.000000 0.285714 0.333333 0.380952 0.095238 0.547619 0.357143 0.000000 0.214286 0.595238 0.190476 0.000000 0.000000 0.285714 0.714286 0.000000 0.000000 0.166667 0.833333 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SVSMGGVSVGGAARRGBBSCGG MEME-9 regular expression -------------------------------------------------------------------------------- [GC][ACG][CG][AC]G[GC][GAC][CG][GC][GAC]G[AG][AG][AG][GA]G[CTG][TGC][CG][CA][GC]G -------------------------------------------------------------------------------- Time 5417.84 secs. ******************************************************************************** ******************************************************************************** MOTIF TCCBYCTYYTCYTCSCTCCYYC MEME-10 width = 22 sites = 17 llr = 251 E-value = 7.5e+003 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCCBYCTYYTCYTCSCTCCYYC MEME-10 Description -------------------------------------------------------------------------------- Simplified A ::1::1::21:1::::11:::: pos.-specific C :994572551932656:88549 probability G :::42211:21::24111:22: matrix T a1:23:6535:681139:2341 bits 2.0 * 1.8 * 1.6 * 1.4 *** * * * * * Relative 1.2 *** * * *** * Entropy 1.0 *** * * *** * (21.3 bits) 0.8 *** *** * ******* * 0.6 *** ***** ************ 0.4 ********* ************ 0.2 ********************** 0.0 ---------------------- Multilevel TCCCCCTCCTCTTCCCTCCCCC consensus GT CTTG C GGT TT sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCBYCTYYTCYTCSCTCCYYC MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr12:50247119-50247619 + 16 1.08e-11 aactttgaac tcccccttttcttccctccttc cctctgtctc chr5:176388742-176389242 - 79 2.23e-09 . TCCTTCTCTACTTCCTTCCCTC CGACATCACT chr15:73992119-73992619 + 64 1.43e-08 GGGGCCCGCT TCCGCCGTCGCATGGCTCCCCC TGCGCTGGGA chr19:41501316-41501816 - 6 1.59e-08 TCATCATCCA TCCCTCTTTTCTTTGTTCTCCC GGGTC chr17:42388506-42389006 - 78 1.96e-08 A TTCCGGTCATCTTCCCTCCCTC CCCCCGGGCT chr7:99699102-99699602 - 78 2.40e-08 G TCCCCCGGCTCTTCCCTCTTTC CTGTGCCATG chr19:37370928-37371428 + 2 3.22e-08 C TCAGTCCTCGCCTCGCTCCTCC TCGCGGAGGA chr15:70892244-70892744 + 22 3.90e-08 TTTGATATCT TCCTCCTCCTCCTCCCTGCGCT GCTCCCCAGG chr13:67224120-67224620 + 47 6.19e-08 GATCCTTCCC TCCCCCTTCTCCTTGCTACTGC GGGATTGGCA chr12:40224917-40225417 - 34 7.39e-08 CTTCAGAGTT TCCTCGTCCTCTTCGCACCCCT GACAGCTGCC chr17:57849964-57850464 - 70 9.59e-08 TTACTTCTG TCCGGCTTTGGCTCGCTCCTGC CCTTTTGGCT chr3:194672272-194672772 + 53 1.04e-07 CGGCACTAGC TCCGCCTTCCGCTGCTTCCGTC AGGAGGACGC chr8:133381828-133382328 - 63 1.23e-07 CAAGATGACA TCACCACCATCTTCCCTCTCTC CTGCCCAGAC chr4:4541838-4542338 + 13 2.51e-07 GAAGGACTGG TCCTGCCCCACACGCCTCCCCC CGGCAACGGC chr5:43064782-43065282 - 30 5.52e-07 TAGGGGCGAC TCCGTGTTTTCTCGGTTGCCGC GCTCTTGGTA chr6:107114161-107114661 + 71 5.52e-07 GCGGGGCCCA TCCCTCTCCGCTCCCGGCCGCC GCCGCCGC chr5:173144210-173144710 - 64 1.42e-06 CAAACGCGTT TTCGCACCACCTTCTTTCCCTC CCCACCCAGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCBYCTYYTCYTCSCTCCYYC MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:50247119-50247619 1.1e-11 15_[+10]_63 chr5:176388742-176389242 2.2e-09 78_[-10] chr15:73992119-73992619 1.4e-08 63_[+10]_15 chr19:41501316-41501816 1.6e-08 5_[-10]_73 chr17:42388506-42389006 2e-08 77_[-10]_1 chr7:99699102-99699602 2.4e-08 77_[-10]_1 chr19:37370928-37371428 3.2e-08 1_[+10]_77 chr15:70892244-70892744 3.9e-08 21_[+10]_57 chr13:67224120-67224620 6.2e-08 46_[+10]_32 chr12:40224917-40225417 7.4e-08 33_[-10]_45 chr17:57849964-57850464 9.6e-08 69_[-10]_9 chr3:194672272-194672772 1e-07 52_[+10]_26 chr8:133381828-133382328 1.2e-07 62_[-10]_16 chr4:4541838-4542338 2.5e-07 12_[+10]_66 chr5:43064782-43065282 5.5e-07 29_[-10]_49 chr6:107114161-107114661 5.5e-07 70_[+10]_8 chr5:173144210-173144710 1.4e-06 63_[-10]_15 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCBYCTYYTCYTCSCTCCYYC MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCCBYCTYYTCYTCSCTCCYYC width=22 seqs=17 chr12:50247119-50247619 ( 16) TCCCCCTTTTCTTCCCTCCTTC 1 chr5:176388742-176389242 ( 79) TCCTTCTCTACTTCCTTCCCTC 1 chr15:73992119-73992619 ( 64) TCCGCCGTCGCATGGCTCCCCC 1 chr19:41501316-41501816 ( 6) TCCCTCTTTTCTTTGTTCTCCC 1 chr17:42388506-42389006 ( 78) TTCCGGTCATCTTCCCTCCCTC 1 chr7:99699102-99699602 ( 78) TCCCCCGGCTCTTCCCTCTTTC 1 chr19:37370928-37371428 ( 2) TCAGTCCTCGCCTCGCTCCTCC 1 chr15:70892244-70892744 ( 22) TCCTCCTCCTCCTCCCTGCGCT 1 chr13:67224120-67224620 ( 47) TCCCCCTTCTCCTTGCTACTGC 1 chr12:40224917-40225417 ( 34) TCCTCGTCCTCTTCGCACCCCT 1 chr17:57849964-57850464 ( 70) TCCGGCTTTGGCTCGCTCCTGC 1 chr3:194672272-194672772 ( 53) TCCGCCTTCCGCTGCTTCCGTC 1 chr8:133381828-133382328 ( 63) TCACCACCATCTTCCCTCTCTC 1 chr4:4541838-4542338 ( 13) TCCTGCCCCACACGCCTCCCCC 1 chr5:43064782-43065282 ( 30) TCCGTGTTTTCTCGGTTGCCGC 1 chr6:107114161-107114661 ( 71) TCCCTCTCCGCTCCCGGCCGCC 1 chr5:173144210-173144710 ( 64) TTCGCACCACCTTCTTTCCCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCBYCTYYTCYTCSCTCCYYC MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 11.5118 E= 7.5e+003 -1073 -1073 -1073 200 -1073 182 -1073 -108 -108 182 -1073 -1073 -1073 72 50 -9 -1073 108 -50 24 -108 150 -50 -1073 -1073 -9 -109 137 -1073 91 -209 91 -50 108 -1073 24 -108 -109 -9 108 -1073 182 -109 -1073 -108 23 -1073 124 -1073 -50 -1073 172 -1073 137 -9 -108 -1073 108 72 -208 -1073 137 -209 24 -208 -1073 -209 182 -208 172 -109 -1073 -1073 172 -1073 -50 -1073 108 -50 24 -1073 72 -50 72 -1073 182 -1073 -108 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCBYCTYYTCYTCSCTCCYYC MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 17 E= 7.5e+003 0.000000 0.000000 0.000000 1.000000 0.000000 0.882353 0.000000 0.117647 0.117647 0.882353 0.000000 0.000000 0.000000 0.411765 0.352941 0.235294 0.000000 0.529412 0.176471 0.294118 0.117647 0.705882 0.176471 0.000000 0.000000 0.235294 0.117647 0.647059 0.000000 0.470588 0.058824 0.470588 0.176471 0.529412 0.000000 0.294118 0.117647 0.117647 0.235294 0.529412 0.000000 0.882353 0.117647 0.000000 0.117647 0.294118 0.000000 0.588235 0.000000 0.176471 0.000000 0.823529 0.000000 0.647059 0.235294 0.117647 0.000000 0.529412 0.411765 0.058824 0.000000 0.647059 0.058824 0.294118 0.058824 0.000000 0.058824 0.882353 0.058824 0.823529 0.117647 0.000000 0.000000 0.823529 0.000000 0.176471 0.000000 0.529412 0.176471 0.294118 0.000000 0.411765 0.176471 0.411765 0.000000 0.882353 0.000000 0.117647 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCCBYCTYYTCYTCSCTCCYYC MEME-10 regular expression -------------------------------------------------------------------------------- TCC[CGT][CT]C[TC][CT][CT][TG]C[TC]T[CG][CG][CT]TCC[CT][CT]C -------------------------------------------------------------------------------- Time 5924.80 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:96906771-96907271 1.65e-04 78_[-4(2.52e-06)] chr12:103956950-10395745 1.80e-04 32_[+9(1.03e-05)]_10_[-4(1.39e-05)]_\ 14 chr6:28742721-28743221 1.97e-02 37_[-8(2.14e-08)]_41 chr17:45320842-45321342 3.39e-01 41_[-5(2.67e-05)]_50 chr15:65517496-65517996 1.95e-05 31_[+9(5.42e-06)]_26_[-6(5.31e-06)]_\ 5 chr8:10152240-10152740 6.22e-02 11_[+5(3.81e-06)]_52_[+2(6.92e-05)]_\ 14 chr19:45078991-45079491 1.25e-02 28_[-9(8.16e-06)]_50 chr19:5803915-5804415 1.13e-05 22_[-4(8.97e-08)]_10_[+9(9.54e-06)]_\ 24 chr5:91314204-91314704 1.44e-02 18_[-2(7.43e-05)]_10_[+5(7.63e-06)]_\ 49 chr7:132255818-132256318 1.95e-03 20_[+1(6.02e-07)]_63 chr13:75437561-75438061 2.12e-01 77_[+2(1.58e-05)]_9 chr10:32346069-32346569 3.26e-06 16_[+4(2.24e-06)]_25_[-6(5.31e-06)]_\ 21 chr4:184734006-184734506 1.95e-01 100 chr1:211133946-211134446 1.60e-06 6_[+4(6.23e-06)]_[-4(5.59e-06)]_2_\ [+4(1.50e-07)]_26 chr13:108218180-10821868 1.94e-01 100 chr1:226268747-226269247 9.71e-02 41_[-3(2.35e-05)]_43 chr19:36070361-36070861 9.92e-04 6_[+10(6.21e-05)]_5_[+5(1.53e-05)]_\ 58 chr8:42457990-42458490 1.68e-01 38_[+7(3.11e-05)]_40 chr21:32612254-32612754 3.61e-01 100 chr19:43596268-43596768 5.96e-02 100 chr19:38831711-38832211 6.45e-01 100 chr16:667763-668263 3.05e-03 8_[+4(4.49e-07)]_6_[+6(1.40e-05)]_\ 48 chr1:110176232-110176732 2.89e-04 25_[+1(4.02e-08)]_11_[-1(2.75e-06)]_\ 30 chr16:87388433-87388933 3.85e-01 63_[+3(2.74e-05)]_21 chr5:145975508-145976008 9.99e-05 17_[-1(6.49e-08)]_66 chr16:67872808-67873308 8.19e-05 6_[-9(3.10e-09)]_16_[+4(4.31e-05)]_\ 34 chr1:230681497-230681997 6.73e-01 100 chr5:10288461-10288961 1.87e-04 26_[+1(9.31e-09)]_57 chr16:74996953-74997453 3.75e-02 42_[-2(1.41e-06)]_44 chr8:38888113-38888613 1.73e-02 7_[+2(3.65e-07)]_79 chr1:228165605-228166105 2.05e-03 41_[+4(2.44e-07)]_7_[+4(1.26e-05)]_\ 8 chr1:226939515-226940015 9.85e-04 13_[-9(2.09e-08)]_65 chr1:179882492-179882992 1.74e-02 28_[+9(6.30e-05)]_11_[+9(1.19e-06)]_\ 17 chr1:8525865-8526365 4.62e-01 100 chr15:70271377-70271877 1.80e-01 71_[-5(7.63e-06)]_20 chr6:28953072-28953572 9.36e-01 100 chr2:58042470-58042970 1.38e-03 32_[-1(1.40e-07)]_28_[-5(4.58e-05)]_\ 14 chr3:169657311-169657811 3.40e-04 47_[-1(1.30e-06)]_36 chr19:48619126-48619626 1.31e-02 46_[-9(7.68e-07)]_32 chr1:22451691-22452191 8.39e-01 100 chr5:173144210-173144710 1.68e-05 25_[-4(4.49e-06)]_16_\ [-10(1.42e-06)]_15 chr10:51170753-51171253 2.41e-03 37_[-2(1.41e-06)]_49 chr1:155250604-155251104 1.70e-02 18_[-4(1.04e-05)]_60 chr9:105244178-105244678 1.30e-03 25_[+9(1.79e-06)]_20_[-4(5.45e-05)]_\ 11 chr17:32341942-32342442 1.27e-01 73_[+4(9.10e-05)]_5 chr16:3183991-3184491 8.77e-02 100 chr8:94719569-94720069 1.07e-03 6_[+9(4.18e-06)]_36_[+4(6.23e-06)]_\ 14 chr7:7681456-7681956 1.66e-01 46_[+2(5.74e-06)]_40 chr1:109149163-109149663 1.43e-02 12_[+5(9.92e-05)]_20_[+2(2.81e-06)]_\ 45 chr17:2975339-2975839 1.46e-01 100 chr12:71840362-71840862 4.24e-01 100 chr1:91885786-91886286 2.94e-03 11_[-4(5.05e-05)]_30_[+9(8.16e-06)]_\ 15 chr17:66715685-66716185 5.00e-02 7_[+6(1.31e-07)]_77 chr21:29277386-29277886 1.33e-03 26_[+3(1.98e-06)]_[-1(3.28e-08)]_41 chr3:61894982-61895482 6.88e-04 49_[-1(2.64e-07)]_34 chr17:7822581-7823081 1.65e-01 26_[-2(1.16e-05)]_60 chr5:32217734-32218234 2.91e-04 8_[+3(5.50e-06)]_36_[-1(4.06e-07)]_\ 23 chr1:226547613-226548113 3.39e-03 16_[+8(3.94e-05)]_10_[+6(7.08e-06)]_\ 36 chr8:30141564-30142064 3.90e-03 37_[-1(2.34e-07)]_46 chr1:244655160-244655660 3.93e-01 31_[-2(2.02e-06)]_55 chr4:55378763-55379263 7.70e-03 33_[+2(2.98e-05)]_53 chr1:183471778-183472278 2.22e-01 15_[+9(5.39e-05)]_63 chr22:40070668-40071168 1.16e-01 47_[-2(1.41e-06)]_39 chr5:181207633-181208133 9.90e-01 100 chr1:234612510-234613010 2.68e-01 100 chr9:136109548-136110048 2.38e-05 10_[-4(1.84e-05)]_42_[-4(4.49e-07)]_\ 4 chr5:81736013-81736513 5.73e-02 46_[+1(7.22e-07)]_37 chr16:75305374-75305874 1.45e-02 26_[+5(6.87e-05)]_40_[-1(2.57e-06)]_\ 8 chr6:27592572-27593072 5.97e-03 55_[-8(7.24e-08)]_23 chr7:65872571-65873071 7.78e-04 54_[-3(3.49e-07)]_30 chr1:225653599-225654099 7.09e-04 44_[+10(4.49e-07)]_34 chr7:105010008-105010508 7.24e-01 100 chr15:71279078-71279578 2.14e-01 100 chr18:35497749-35498249 1.71e-01 100 chr5:111092026-111092526 2.72e-01 26_[+10(9.67e-05)]_52 chr1:221284028-221284528 4.38e-04 23_[-2(1.74e-05)]_12_[-1(9.01e-08)]_\ 34 chr7:121160024-121160524 1.00e+00 100 chr17:19187859-19188359 9.23e-02 100 chr13:36999140-36999640 3.91e-05 16_[-4(3.87e-07)]_23_[+4(7.94e-07)]_\ 17 chr3:194350134-194350634 5.88e-04 3_[+10(8.01e-05)]_31_[-6(1.37e-06)]_\ 28 chr10:101694078-10169457 1.42e-04 30_[+4(4.02e-06)]_12_[+9(3.82e-06)]_\ 14 chr5:41747193-41747693 2.26e-03 39_[+1(6.93e-09)]_44 chr17:1080693-1081193 5.31e-04 59_[-5(1.14e-05)]_12_[-1(2.34e-07)]_\ 3 chr19:44207291-44207791 3.40e-01 39_[+10(6.62e-05)]_39 chr1:54715562-54716062 2.43e-05 5_[-9(5.42e-06)]_51_[-4(2.24e-06)] chr1:150487030-150487530 4.00e-02 79_[+6(2.27e-05)]_5 chr7:95549679-95550179 2.61e-02 17_[-5(1.53e-05)]_61_[-5(3.43e-05)]_\ 4 chr6:82260183-82260683 9.98e-01 100 chr19:58380514-58381014 2.77e-02 56_[-4(1.68e-05)]_[+9(3.49e-06)] chr22:32473225-32473725 7.41e-05 28_[+3(1.43e-05)]_39_[-6(7.19e-07)]_\ 1 chr19:36127649-36128149 2.51e-03 33_[+6(5.84e-07)]_51 chr2:223957177-223957677 2.48e-02 6_[+4(1.75e-06)]_72 chr5:99900366-99900866 1.24e-01 8_[-3(3.19e-05)]_76 chr20:35320351-35320851 1.31e-02 58_[+3(5.52e-08)]_26 chr12:49832858-49833358 6.07e-02 42_[-2(2.98e-05)]_44 chr19:33293196-33293696 1.53e-01 100 chr3:168883091-168883591 5.78e-02 51_[+3(2.24e-06)]_33 chr19:37467239-37467739 2.98e-02 27_[+4(3.98e-05)]_51 chr1:161530916-161531416 8.54e-04 39_[+8(2.79e-09)]_39 chr17:50707682-50708182 5.91e-05 75_[+4(3.33e-07)]_3 chr14:24188745-24189245 3.82e-01 100 chr3:12556733-12557233 4.93e-02 10_[-1(7.24e-05)]_73 chr22:41446598-41447098 3.24e-05 43_[+8(7.51e-06)]_11_[+4(2.08e-07)]_\ 2 chr1:234977852-234978352 7.61e-05 34_[+1(1.16e-10)]_49 chr19:37370928-37371428 8.18e-06 1_[+10(3.22e-08)]_25_[-4(4.31e-05)]_\ 30 chr19:11344360-11344860 1.17e-03 69_[-5(3.05e-05)]_5_[+1(1.64e-06)] chr5:139517839-139518339 5.96e-07 33_[-1(3.43e-06)]_9_[+6(1.31e-07)]_\ 25 chr1:208235799-208236299 1.52e-03 17_[+3(7.60e-07)]_5_[-7(2.84e-05)]_\ 40 chr5:142223565-142224065 3.33e-03 37_[-1(1.10e-06)]_1_[-5(2.67e-05)]_\ 36 chr7:140165420-140165920 2.86e-01 100 chr18:48998056-48998556 2.07e-04 34_[+5(3.05e-05)]_21_[+4(3.67e-05)]_\ 14 chr6:27505535-27506035 4.11e-01 58_[+2(5.18e-05)]_28 chr10:104331421-10433192 5.05e-02 7_[-5(3.81e-06)]_84 chr6:6467240-6467740 6.66e-02 20_[+2(1.74e-05)]_66 chr15:99306096-99306596 2.55e-01 74_[+2(9.42e-07)]_12 chr12:1605792-1606292 3.60e-04 8_[-2(2.39e-06)]_50_[-4(3.38e-05)]_\ 6 chr8:37849673-37850173 1.26e-03 14_[+4(6.92e-06)]_13_[-6(6.60e-06)]_\ 35 chr21:34543871-34544371 1.23e-03 33_[+1(5.49e-07)]_50 chr16:29943427-29943927 5.21e-03 25_[-1(2.11e-08)]_58 chr5:149959256-149959756 1.91e-02 9_[-3(2.74e-05)]_20_[-10(2.26e-05)]_\ 33 chr10:18607480-18607980 3.03e-04 6_[+5(3.05e-05)]_31_[-1(6.02e-07)]_\ 37 chr19:4400471-4400971 6.04e-06 64_[+4(1.27e-07)]_14 chr6:28080694-28081194 2.16e-01 100 chr13:31424120-31424620 1.19e-01 100 chr16:3152704-3153204 3.44e-04 39_[+8(1.87e-10)]_39 chr5:141564088-141564588 8.61e-01 100 chr15:75368373-75368873 3.84e-04 32_[-9(3.45e-05)]_12_[+9(3.36e-07)]_\ 12 chr6:37240130-37240630 1.88e-02 34_[+1(9.09e-06)]_7_[+1(1.60e-07)]_\ 25 chr10:6088647-6089147 1.21e-02 69_[+4(2.62e-05)]_9 chr17:73474227-73474727 9.09e-04 44_[+5(1.14e-05)]_1_[-1(3.29e-07)]_\ 29 chr3:188348599-188349099 4.54e-05 27_[-1(1.23e-07)]_31_[+4(1.53e-05)]_\ 3 chr2:169569890-169570390 6.16e-02 44_[-2(2.30e-05)]_5_[+3(6.10e-06)]_\ 21 chr19:43934922-43935422 2.71e-01 100 chr5:88824872-88825372 4.55e-01 61_[+2(6.52e-06)]_25 chr21:44939702-44940202 4.48e-04 43_[+4(2.44e-07)]_2_[+4(2.86e-05)]_\ 11 chr10:31646516-31647016 1.43e-02 4_[+5(2.67e-05)]_32_[-3(2.17e-05)]_\ 39 chr16:690192-690692 6.69e-02 5_[-9(1.71e-05)]_73 chr5:95861477-95861977 8.47e-02 63_[-3(3.43e-05)]_2_[-3(6.10e-06)]_\ 3 chr6:41767149-41767649 3.83e-03 56_[-2(1.16e-05)]_30 chr6:111591370-111591870 1.23e-02 47_[-5(7.63e-06)]_44 chr5:37717519-37718019 1.38e-01 26_[+1(1.01e-06)]_57 chr1:26698119-26698619 6.52e-01 100 chr11:62653127-62653627 1.49e-01 62_[-6(1.91e-05)]_22 chr1:227762367-227762867 1.01e-01 29_[+6(6.14e-06)]_55 chr7:100247220-100247720 1.60e-02 54_[-5(7.63e-06)]_37 chr12:69476176-69476676 1.51e-01 48_[-2(3.24e-05)]_38 chr7:103344613-103345113 2.01e-01 53_[-1(8.40e-05)]_30 chr7:135728213-135728713 1.47e-01 38_[-3(2.17e-05)]_46 chr15:70892244-70892744 4.54e-06 21_[+10(3.90e-08)]_57 chr19:36528343-36528843 6.71e-01 100 chr8:37538793-37539293 6.10e-02 35_[+5(1.14e-05)]_56 chr1:173714639-173715139 4.89e-02 15_[+10(2.86e-05)]_26_\ [+2(6.92e-05)]_23 chr20:1430074-1430574 8.38e-02 40_[-2(3.80e-06)]_46 chr13:67224120-67224620 4.36e-07 46_[+10(6.19e-08)]_3_[+1(1.60e-07)]_\ 12 chr1:39398428-39398928 5.20e-01 100 chr17:42773135-42773635 4.77e-02 11_[+10(9.97e-05)]_39_\ [-4(1.84e-05)]_6 chr6:107114161-107114661 8.68e-14 44_[+4(4.05e-11)]_4_[+10(5.52e-07)]_\ 8 chr10:6141072-6141572 5.38e-03 33_[+6(3.35e-05)]_31_[-5(3.43e-05)]_\ 11 chr5:116574634-116575134 8.05e-03 [-4(9.10e-07)]_78 chr19:38962041-38962541 1.33e-02 40_[+6(1.97e-06)]_44 chr14_GL000225v1_random: 1.79e-07 2_[-3(4.00e-06)]_31_[-7(2.84e-13)]_\ [-3(2.24e-06)]_13 chr6:40882271-40882771 3.99e-05 52_[+3(4.00e-06)]_8_[+1(5.59e-08)]_\ 7 chr17:57849964-57850464 4.95e-03 69_[-10(9.59e-08)]_9 chr5:32489811-32490311 5.87e-04 49_[+8(9.17e-08)]_29 chr10:77162540-77163040 9.48e-02 25_[-3(9.05e-06)]_59 chr12:109477284-10947778 3.52e-03 60_[-9(2.91e-06)]_18 chr16:70066718-70067218 2.48e-01 58_[+3(4.46e-06)]_26 chr1:224330206-224330706 1.84e-02 15_[-4(4.67e-05)]_18_[-4(1.68e-05)]_\ 23 chr10:113524488-11352498 1.80e-02 37_[-2(2.39e-06)]_49 chr1:235104085-235104585 2.11e-06 18_[-4(1.19e-06)]_31_[+6(2.17e-07)]_\ 13 chr6:80132940-80133440 2.35e-02 26_[+1(1.60e-07)]_57 chr1:225746707-225747207 6.91e-02 87_[-5(2.67e-05)]_4 chr5:112160537-112161037 2.40e-03 17_[-4(4.31e-05)]_14_[-9(4.56e-06)]_\ 25 chr12:10721987-10722487 1.47e-02 60_[+1(2.39e-06)]_23 chr1:147172322-147172822 2.77e-03 43_[+4(6.83e-05)]_10_[+4(3.87e-07)]_\ 3 chr14:65472189-65472689 8.00e-02 39_[+3(2.74e-05)]_18_[+2(1.74e-05)]_\ 13 chr1:230104614-230105114 5.81e-03 15_[+1(3.68e-06)]_[-5(3.05e-05)]_59 chr12:10750036-10750536 3.91e-02 39_[-6(3.06e-06)]_45 chr19:30648363-30648863 9.68e-03 32_[-2(1.70e-06)]_54 chr10:22912389-22912889 1.40e-01 79_[-2(2.51e-05)]_7 chr19:44259748-44260248 2.94e-02 18_[-9(6.86e-07)]_60 chr14:90409202-90409702 3.87e-01 100 chr17:26619784-26620284 7.37e-01 100 chr18:48901926-48902426 9.71e-06 17_[+1(9.01e-08)]_12_[-5(3.43e-05)]_\ 45 chr20:33401331-33401831 3.59e-01 100 chr5:62233352-62233852 5.72e-03 11_[-2(4.13e-05)]_17_[+5(7.63e-06)]_\ 8_[-5(2.67e-05)]_32 chr15:68278711-68279211 4.56e-01 58_[+8(5.42e-05)]_20 chr1:83857109-83857609 2.45e-01 72_[-3(7.45e-06)]_12 chr17:59209734-59210234 1.35e-01 100 chr6:82331288-82331788 6.70e-01 11_[-2(1.91e-05)]_75 chr1:224204691-224205191 1.43e-02 68_[-1(2.57e-06)]_15 chr21:37032889-37033389 9.93e-03 3_[-5(2.67e-05)]_28_[-2(7.43e-05)]_\ 46 chr17:18625538-18626038 8.61e-03 34_[+6(2.82e-07)]_32_[+6(3.33e-06)]_\ 2 chr19:40715631-40716131 1.51e-01 78_[+5(1.14e-05)]_13 chr16:22296968-22297468 3.67e-04 24_[+8(7.81e-11)]_54 chr11:126060729-12606122 7.39e-04 17_[+2(7.43e-05)]_28_[+3(3.58e-06)]_\ 25 chr5:175378349-175378849 9.26e-01 100 chr1:155983348-155983848 4.07e-01 68_[-1(1.14e-05)]_15 chr15:69760808-69761308 8.34e-01 100 chr3:155854266-155854766 1.72e-01 100 chr1:29133552-29134052 1.68e-03 30_[-2(1.15e-06)]_56 chr3:131502770-131503270 8.64e-02 48_[+4(4.31e-05)]_30 chr5:140718763-140719263 1.14e-01 9_[+8(5.25e-05)]_69 chr1:145280990-145281490 4.96e-01 100 chr17:44021163-44021663 2.87e-01 60_[-2(7.37e-06)]_26 chr17:21040149-21040649 8.36e-05 74_[-1(4.77e-08)]_9 chr5:49599400-49599900 3.49e-07 11_[+3(2.24e-06)]_[+7(9.55e-12)]_28_\ [+3(2.00e-05)]_7 chr10:7433235-7433735 3.44e-01 65_[+2(3.29e-06)]_21 chr12:29350004-29350504 2.05e-03 60_[-1(2.06e-07)]_23 chr1:28648465-28648965 5.89e-02 100 chr1:41003464-41003964 4.15e-01 5_[-2(5.04e-06)]_81 chr3:87298086-87298586 1.47e-03 13_[+6(2.98e-08)]_71 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14_[+9(3.36e-07)]_11_[+6(2.17e-07)]_\ 37 chr10:101438722-10143922 3.22e-02 12_[+2(5.04e-06)]_12_[-5(4.96e-05)]_\ 53 chr5:175809746-175810246 3.92e-06 19_[+2(2.39e-06)]_1_[-5(7.63e-06)]_\ 30_[+1(3.66e-05)]_10 chr8:16825905-16826405 5.79e-03 49_[+1(1.64e-06)]_19_[+5(3.81e-05)]_\ 6 chrX:73913448-73913948 1.73e-01 27_[-2(9.42e-07)]_59 chr2:27032421-27032921 8.59e-03 36_[+3(1.09e-05)]_48 chr4:70688087-70688587 9.69e-01 100 chr8:26151267-26151767 1.69e-01 53_[+2(2.81e-06)]_33 chr8:7109180-7109680 8.57e-02 74_[+5(2.67e-05)]_17 chr10:22229084-22229584 4.07e-06 17_[+4(1.04e-05)]_4_[+9(1.53e-07)]_\ 6_[-1(7.24e-05)]_12 chrX:13647559-13648059 5.46e-04 14_[-2(1.91e-05)]_2_[+1(2.11e-08)]_\ 53 chr19:55259063-55259563 3.84e-01 100 chr3:138082324-138082824 1.15e-02 2_[-3(3.58e-06)]_82 chr5:125198493-125198993 2.06e-02 30_[-1(3.66e-07)]_53 chr5:93607813-93608313 1.39e-01 49_[+2(1.91e-05)]_37 chr1:212791596-212792096 2.48e-02 73_[+4(3.11e-05)]_5 chr2:178484603-178485103 8.50e-03 48_[-1(5.59e-08)]_35 chr13:40770985-40771485 3.56e-05 24_[+4(3.11e-05)]_2_[-9(2.01e-07)]_\ 30 chr17:41860481-41860981 2.95e-03 40_[-3(1.58e-08)]_44 chr6:25418680-25419180 4.75e-03 34_[-2(5.59e-08)]_52 chr16:48499981-48500481 1.44e-01 20_[+2(2.51e-05)]_66 chr8:133381828-133382328 2.05e-03 19_[+2(6.00e-05)]_9_[-2(4.13e-05)]_\ 6_[-10(1.23e-07)]_16 chr12:38316449-38316949 4.52e-03 19_[+3(6.75e-06)]_39_[+4(7.90e-05)]_\ 4 chr5:43064782-43065282 3.64e-02 29_[-10(5.52e-07)]_49 chr1:157044254-157044754 3.07e-04 24_[-3(6.10e-06)]_15_[-3(9.00e-05)]_\ 2_[-9(8.80e-05)]_5 chrX:119622844-119623344 1.29e-01 100 chr9:3410429-3410929 2.49e-02 40_[+3(1.14e-07)]_44 chr10:84361012-84361512 1.61e-01 100 chr19:55519907-55520407 4.42e-01 100 chr5:140295371-140295871 1.65e-01 53_[-1(1.90e-06)]_30 chr1:115668990-115669490 1.99e-02 34_[+5(7.63e-06)]_35_[+2(3.52e-05)]_\ 8 chr6:99568457-99568957 4.72e-01 100 chr1:21139519-21140019 1.38e-02 27_[+2(4.13e-05)]_30_[-1(1.64e-06)]_\ 12 chr19:40634430-40634930 3.45e-07 31_[-4(3.59e-06)]_9_[-6(7.45e-09)]_\ 22 chr9:129639988-129640488 3.15e-02 33_[+1(9.37e-07)]_50 chr17:42998034-42998534 4.80e-01 100 chr15:69146027-69146527 2.24e-03 58_[-2(1.41e-06)]_28 chr17:58391416-58391916 4.24e-03 2_[+2(4.13e-05)]_29_[-1(1.10e-06)]_\ 38 chr5:44808448-44808948 4.47e-05 10_[-2(3.73e-08)]_42_[+8(5.41e-07)]_\ 12 chr19:39411830-39412330 9.30e-01 100 chr1:164787638-164788138 1.58e-01 37_[-3(2.35e-05)]_47 chr9:11171-11671 2.61e-08 22_[-6(3.56e-08)]_39_[-1(2.67e-05)]_\ 6 chr3:194561280-194561780 7.20e-02 24_[+2(3.73e-08)]_62 chr6:31777110-31777610 1.43e-07 50_[+5(3.05e-05)]_1_[-1(7.57e-10)]_\ 23 chr7:101941959-101942459 4.36e-01 100 chr17:7514636-7515136 8.11e-03 34_[-2(1.58e-05)]_35_[-3(1.31e-05)]_\ 1 chr17:43483578-43484078 7.39e-02 26_[+6(7.94e-07)]_58 chr1:181127031-181127531 9.92e-05 47_[+1(1.80e-09)]_36 chrX:13658620-13659120 1.74e-01 68_[+3(3.58e-06)]_16 chr1:163321601-163322101 6.13e-03 31_[+4(1.15e-05)]_47 chr5:40835068-40835568 6.00e-03 20_[+4(1.68e-05)]_8_[-10(3.96e-05)]_\ 28 chr1:40257839-40258339 3.27e-01 100 chr19:18364963-18365463 6.08e-01 69_[+3(3.95e-05)]_15 chr5:122067233-122067733 7.86e-03 26_[-7(1.12e-05)]_52 chr17:40560190-40560690 1.44e-03 7_[+3(1.70e-05)]_29_[-6(4.67e-07)]_\ 32 chr19:39341723-39342223 2.60e-02 52_[-10(7.52e-05)]_26 chr12:8243257-8243757 1.84e-05 29_[+1(1.23e-07)]_5_[-4(5.21e-08)]_\ 27 chr6:170280345-170280845 1.20e-02 42_[+3(9.05e-06)]_42 chr1:212291404-212291904 9.15e-05 2_[+8(7.09e-07)]_14_[+8(4.62e-06)]_\ 40 chr1:16545717-16546217 5.50e-04 28_[-8(2.35e-08)]_50 chr1:232704735-232705235 1.89e-01 31_[+5(3.81e-05)]_7_[+5(3.05e-05)]_\ 44 chr17:51153277-51153777 1.60e-01 100 chr1:44327756-44328256 4.12e-03 19_[-1(7.64e-08)]_64 chr5:181173583-181174083 5.93e-01 100 chr5:138306952-138307452 5.26e-02 39_[+3(2.95e-07)]_45 chr7:141737995-141738495 2.95e-01 100 chr1:205122054-205122554 1.48e-02 14_[+4(5.45e-05)]_5_[+9(4.84e-07)]_\ 37 chr17:18087620-18088120 3.98e-03 10_[-4(1.26e-05)]_68 chr11:114159934-11416043 1.21e-02 29_[+1(1.06e-07)]_[+1(3.66e-07)]_37 chr2:25991507-25992007 2.74e-02 4_[+6(5.31e-06)]_80 chr1:235067771-235068271 2.36e-03 51_[-1(2.96e-07)]_32 chr17:36133558-36134058 3.36e-02 7_[+5(7.63e-06)]_26_[-3(4.96e-06)]_\ 42 chr1:227563165-227563665 2.34e-01 24_[-2(9.77e-05)]_62 chr12:111819779-11182027 1.14e-01 51_[-2(1.91e-05)]_35 chr10:93702411-93702911 7.43e-08 13_[+4(5.19e-07)]_37_[+9(6.46e-08)]_\ 6 chr3:126357724-126358224 1.49e-01 54_[+3(1.53e-06)]_30 chr16:66406446-66406946 1.44e-03 28_[+4(2.20e-05)]_6_[+3(8.22e-06)]_\ 28 chr1:227735098-227735598 5.42e-05 14_[+9(7.51e-08)]_5_[-4(1.15e-05)]_\ 37 chr17:19063605-19064105 2.09e-01 100 chr11:27201863-27202363 9.51e-02 23_[-3(1.16e-06)]_61 chr8:29675473-29675973 1.05e-02 54_[-5(3.81e-06)]_19_[-3(1.09e-05)]_\ 2 chr10:68900799-68901299 3.47e-04 72_[+2(1.41e-06)]_14 chr15:74546102-74546602 1.21e-06 20_[+9(1.53e-07)]_25_[+1(4.77e-08)]_\ 16 chr5:103119964-103120464 1.87e-01 100 chr5:71830606-71831106 6.96e-03 28_[-2(1.15e-06)]_58 chr12:120646956-12064745 2.31e-06 35_[-4(7.90e-05)]_10_[-1(2.33e-10)]_\ 16 chr12:3171144-3171644 1.64e-02 43_[-3(1.71e-07)]_41 chr1:234997177-234997677 2.86e-06 3_[+6(8.74e-06)]_5_[-1(3.43e-06)]_3_\ [-4(1.39e-05)]_34 chr11:65961996-65962496 5.82e-02 5_[+2(6.92e-05)]_2_[-2(6.00e-07)]_\ 65 chr7:69609969-69610469 1.78e-01 30_[-2(5.18e-05)]_18_[-5(4.20e-05)]_\ 29 chr17:65022749-65023249 8.16e-02 54_[+3(1.84e-05)]_30 chr17:78558303-78558803 6.28e-01 100 chr2:165825020-165825520 1.86e-05 31_[-1(2.97e-09)]_4_[+3(4.96e-06)]_\ 32 chr10:94069810-94070310 3.34e-01 100 chr15:70741158-70741658 2.07e-01 100 chr5:124061672-124062172 5.51e-01 100 chr8:37229054-37229554 3.21e-01 21_[-5(9.54e-05)]_37_[-2(6.00e-05)]_\ 19 chr17:40108310-40108810 1.30e-03 42_[+2(1.15e-07)]_6_[+3(5.63e-07)]_\ 22 chr6:85498822-85499322 6.99e-03 42_[-3(2.54e-05)]_42 chr6:143450468-143450968 1.77e-03 33_[-4(2.84e-06)]_45 chr1:77412411-77412911 6.26e-03 3_[-6(9.11e-05)]_13_[+5(3.81e-06)]_\ 59 chr12:56636711-56637211 6.05e-03 29_[-1(4.99e-07)]_54 chr1:234523521-234524021 9.14e-04 3_[-10(4.09e-05)]_24_[-1(5.59e-08)]_\ 34 chrX:150325312-150325812 2.59e-01 2_[-2(2.51e-05)]_84 chr17:43671068-43671568 7.80e-02 77_[+3(4.46e-06)]_7 chr17:39980637-39981137 1.70e-03 2_[+4(6.92e-06)]_28_[-9(2.23e-05)]_\ 26 chr3:37197613-37198113 1.97e-03 15_[-3(4.19e-08)]_27_[+8(8.62e-05)]_\ 20 chr15:70062307-70062807 1.34e-02 35_[-1(7.22e-07)]_48 chr1:234724153-234724653 3.13e-03 42_[-1(3.94e-06)]_20_[-3(5.19e-05)]_\ 5 chr3:55692915-55693415 5.26e-03 6_[+2(1.74e-05)]_47_[+3(1.01e-06)]_\ 17 chr2:95333888-95334388 2.44e-02 58_[-3(4.96e-06)]_2_[+1(4.51e-05)]_\ 7 chr5:50668042-50668542 3.62e-04 33_[-2(2.98e-05)]_1_[+3(1.01e-06)]_\ 36 chr7:114481939-114482439 5.62e-01 15_[+2(3.24e-05)]_71 chr1:209884518-209885018 1.51e-01 21_[-2(1.58e-05)]_65 chr6:149011880-149012380 2.11e-01 100 chr10:63267226-63267726 2.04e-01 36_[-2(3.80e-06)]_50 chr5:132389703-132390203 2.14e-01 100 chr1:93078913-93079413 2.44e-05 43_[-4(8.51e-06)]_10_[-9(1.11e-05)]_\ 3 chr1:37989855-37990355 5.40e-02 21_[+9(3.19e-06)]_57 chrX:73944048-73944548 4.56e-02 100 chr1:151070353-151070853 1.05e-02 15_[-2(7.53e-07)]_71 chr14:34081775-34082275 5.69e-03 11_[+5(3.81e-06)]_38_[+2(1.43e-05)]_\ 28 chr7:99699102-99699602 1.89e-07 [-2(3.29e-06)]_21_[-5(3.81e-06)]_33_\ [-10(2.40e-08)]_1 chr7:129332673-129333173 3.64e-02 52_[+2(3.52e-05)]_34 chr19:18349515-18350015 2.80e-06 1_[+6(1.31e-07)]_50_[+5(9.54e-05)]_\ 1_[-2(1.41e-06)]_9 chr15:60255408-60255908 5.87e-02 77_[+2(4.73e-07)]_9 chr1:232620479-232620979 2.69e-02 30_[-1(5.49e-07)]_53 chr1:214469215-214469715 6.27e-04 28_[-2(2.09e-07)]_[+8(3.81e-05)]_36 chr1:1375033-1375533 4.49e-06 23_[+4(1.19e-06)]_30_[+9(4.75e-08)]_\ 3 chr1:109438736-109439236 2.64e-02 8_[-3(8.79e-07)]_53_[+2(9.12e-05)]_\ 9 chr1:44213157-44213657 6.63e-01 100 chr8:93846755-93847255 1.67e-01 78_[-2(6.46e-05)]_8 chr22:30017315-30017815 4.49e-02 68_[+5(3.81e-06)]_23 chr16:19517270-19517770 3.53e-02 11_[+3(2.48e-07)]_73 chr11:106078021-10607852 2.53e-01 62_[-2(9.33e-06)]_24 chr7:23298894-23299394 1.64e-01 100 chr10:124917810-12491831 2.03e-01 37_[-3(1.16e-06)]_47 chr7:99751548-99752048 1.60e-03 14_[-2(3.29e-06)]_21_[-5(3.81e-06)]_\ 42 chr5:399675-400175 9.68e-03 100 chr5:172437410-172437910 3.09e-03 44_[-1(1.76e-06)]_39 chr19:41501316-41501816 1.45e-07 5_[-10(1.59e-08)]_6_[+5(4.58e-05)]_\ 5_[-1(3.66e-07)]_36 chr17:70661149-70661649 1.04e-01 13_[+2(4.45e-05)]_6_[+3(3.19e-05)]_\ 51 chr15:89383546-89384046 2.50e-05 41_[-1(4.51e-07)]_23_[+1(4.02e-08)]_\ 2 chr15:65610930-65611430 1.19e-01 76_[-4(1.15e-05)]_2 chr2:55014920-55015420 1.55e-03 17_[+6(5.84e-07)]_15_[-3(1.16e-06)]_\ 36 chr14_GL000225v1_random: 3.63e-07 3_[-7(5.91e-12)]_[-3(2.24e-06)]_30_\ [-7(2.27e-07)]_7 chr4:53011921-53012421 1.96e-02 16_[-2(9.33e-06)]_51_[+5(3.81e-06)]_\ 10 chr6:131628048-131628548 1.77e-01 100 chr7:23418071-23418571 9.70e-03 43_[-2(1.16e-05)]_27_[-6(3.54e-05)] chr8:30382234-30382734 6.38e-01 52_[+3(3.95e-05)]_32 chr9:129334002-129334502 6.39e-05 26_[+3(2.48e-07)]_36_[+9(1.20e-05)] chr19:35757455-35757955 2.92e-01 79_[+6(5.56e-05)]_5 chr1:153880943-153881443 7.70e-03 43_[-1(1.80e-07)]_40 chr6:53927177-53927677 1.44e-03 29_[+1(4.51e-07)]_25_[+3(3.49e-07)]_\ 13 chr19:48539554-48540054 3.52e-04 56_[+1(1.16e-10)]_27 chr12:57846932-57847432 8.16e-04 52_[+2(3.65e-07)]_34 chr2:170530187-170530687 2.24e-03 18_[-1(2.22e-06)]_65 chr7:116547259-116547759 3.51e-04 17_[-7(3.67e-05)]_8_[+3(7.45e-06)]_\ 37 chr7:103100300-103100800 5.80e-04 44_[-3(7.22e-09)]_40 chr1:80054126-80054626 5.75e-02 68_[-1(3.29e-07)]_15 chr17:26603654-26604154 8.38e-01 100 chr15:33126616-33127116 5.92e-02 27_[-7(4.74e-05)]_3_[-2(6.46e-05)]_\ 34 chr10:21724680-21725180 1.17e-01 61_[-1(4.99e-07)]_22 chr1:34763451-34763951 1.50e-02 23_[-5(7.63e-06)]_36_[-2(1.74e-05)]_\ 18 chr1:23544613-23545113 2.18e-02 15_[+3(7.45e-06)]_69 chr10:112565447-11256594 4.14e-01 100 chr10:87586164-87586664 4.44e-04 23_[-5(2.67e-05)]_18_[+1(1.06e-07)]_\ 33 chr17:28599396-28599896 4.90e-03 7_[+1(4.51e-06)]_51_[-2(2.98e-05)]_\ 11 chr1:76759959-76760459 3.60e-02 70_[-3(3.20e-06)]_14 chr11:85628101-85628601 5.98e-05 17_[+9(2.96e-07)]_8_[-2(7.53e-07)]_\ 15_[+9(9.21e-05)]_2 chr14_GL000225v1_random: 3.87e-07 20_[-3(1.43e-05)]_30_[-7(1.19e-12)]_\ 12 chrX:78103807-78104307 2.14e-02 16_[+4(9.41e-06)]_62 chr1:197180308-197180808 1.29e-02 21_[-7(2.43e-05)]_23_[-2(2.09e-07)]_\ 20 chr7:104932218-104932718 3.67e-01 68_[-2(2.98e-05)]_18 chr22:25942957-25943457 7.24e-04 54_[-3(4.96e-06)]_30 chr20:32270580-32271080 1.72e-02 57_[-2(1.15e-07)]_29 chr4:82374296-82374796 9.85e-05 20_[-4(9.10e-07)]_19_[+8(8.86e-05)]_\ 17 chr1:229221077-229221577 1.25e-02 45_[+2(1.58e-05)]_41 chr19:50388494-50388994 1.56e-01 69_[+2(4.39e-06)]_17 chr5:124908556-124909056 1.14e-01 14_[-5(4.58e-05)]_77 chr7:113421625-113422125 1.40e-02 32_[+4(9.10e-05)]_46 chr7:94446292-94446792 5.30e-02 16_[+2(7.82e-08)]_70 chr5:124706624-124707124 3.39e-01 54_[+2(1.29e-05)]_32 chr1:212488389-212488889 1.50e-01 7_[+2(1.16e-05)]_79 chr5:66757140-66757640 6.94e-04 26_[-2(8.31e-06)]_34_[-6(3.65e-07)]_\ 10 chr16:84138675-84139175 1.67e-01 67_[+3(9.95e-06)]_17 chr5:10601227-10601727 1.07e-03 27_[-1(1.80e-07)]_10_[+1(1.21e-05)]_\ 9_[-6(4.36e-05)]_4 chr7:112422833-112423333 5.14e-05 19_[-9(9.62e-05)]_5_[+5(7.63e-06)]_\ 45 chr16:69073279-69073779 8.08e-02 69_[-5(3.43e-05)]_22 chr6:155177323-155177823 3.03e-03 27_[+6(4.10e-07)]_3_[-2(4.39e-06)]_\ 40 chr6:118800479-118800979 6.63e-04 5_[-6(3.65e-07)]_5_[-10(5.47e-05)]_\ 52 chr8:37256709-37257209 4.21e-03 51_[-2(2.09e-07)]_35 chr5:177546330-177546830 1.00e-03 9_[+5(2.67e-05)]_14_[+3(2.95e-07)]_\ 52 chr13:112102298-11210279 2.22e-01 45_[+2(3.29e-06)]_41 chr5:124661428-124661928 2.60e-02 50_[-3(2.35e-05)]_34 chr6:43630028-43630528 1.83e-01 67_[+3(8.02e-05)]_17 chr4:185095932-185096432 7.74e-02 26_[+3(1.43e-05)]_58 chr1:125179940-125180440 9.42e-01 100 chr12:40224917-40225417 2.06e-03 33_[-10(7.39e-08)]_45 chr12:54039773-54040273 4.46e-02 45_[-3(4.00e-06)]_39 chr5:157511503-157512003 3.64e-04 75_[+8(4.06e-07)]_3 chr15:38354223-38354723 9.22e-07 11_[-2(2.81e-06)]_10_[+3(4.96e-06)]_\ 31_[-6(5.84e-07)]_2 chr8:120859583-120860083 9.25e-02 77_[+2(5.74e-06)]_9 chr4:38620878-38621378 6.99e-03 37_[+2(2.30e-05)]_21_[-8(1.11e-06)]_\ 6 chr12:53501377-53501877 1.37e-03 16_[-4(2.40e-05)]_12_[-2(2.10e-05)]_\ 36 chr10:116891095-11689159 2.44e-02 32_[+2(9.42e-07)]_54 chr17:78974979-78975479 5.13e-01 70_[-2(3.80e-06)]_16 chr3:14125641-14126141 9.04e-03 39_[+2(7.37e-06)]_17_[+4(3.59e-06)]_\ 8 chr22:37330363-37330863 3.28e-02 52_[+3(1.53e-06)]_32 chr6:37171929-37172429 1.84e-02 2_[-10(9.37e-05)]_15_[+3(1.34e-06)]_\ 45 chr1:200510053-200510553 8.31e-05 28_[+3(8.22e-06)]_10_[-6(6.61e-08)]_\ 30 chr1:46522108-46522608 3.38e-04 9_[+5(1.14e-05)]_3_[+2(6.00e-07)]_\ 65 chr1:110338807-110339307 5.56e-02 38_[-3(2.53e-06)]_46 chr1:223819689-223820189 3.03e-01 14_[-2(9.42e-07)]_72 chr16:1271747-1272247 6.29e-03 22_[+1(5.59e-08)]_21_[+1(5.59e-08)]_\ 23 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: wotan ********************************************************************************