Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues
MOTIFS /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
CATAAGACAGACACTCCCAGAGCGGC | 26 | CATAAGACAGACACTCCCAGAGCGGC |
AGGAGACCAGGGCDTATTT | 19 | AGGAGACCAGGGCGTATTT |
TTTAKAGACCTCCCCC | 16 | TTTATAGACCTCCCCC |
GTTTCTGRTGAGAARTCWGCTG | 22 | GTTTCTGATGAGAAGTCTGCTG |
GYVCAGCATGACTCAGCAGGTTTGGAGYGCAGGY | 34 | GTCCAGCATGACTCAGCAGGTTTGGAGTGCAGGC |
TCCCTTATCTWCAACY | 16 | TCCCTTATCTTCAACT |
MWWGBAAGCCWGARGRCAVTGS | 22 | CATGGAAGCCAGAAGGCACTGG |
GAGTGCACTCAGACCCAGYGGATTAACAT | 29 | GAGTGCACTCAGACCCAGTGGATTAACAT |
TYAYRACTTACACAGACCATCTAYGACATGC | 31 | TCACAACTTACACAGACCATCTATGACATGC |
AGAGAGAAACAAATATGCTCCAAATTTTGTT | 31 | AGAGAGAAACAAATATGCTCCAAATTTTGTT |
Random model letter frequencies (/srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.275 C 0.225 G 0.225 T 0.275
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | - | 32458980 | 32459005 | 1.29e-16 | 6.65e-12 | CATAAGACAGACACTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 33152349 | 33152374 | 1.29e-16 | 6.65e-12 | cataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | - | 34570282 | 34570307 | 1.29e-16 | 6.65e-12 | CATAAGACAGACACTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | + | 38022666 | 38022691 | 1.29e-16 | 6.65e-12 | cataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr2 | + | 46643062 | 46643087 | 1.29e-16 | 6.65e-12 | cataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr11 | + | 47876063 | 47876088 | 1.29e-16 | 6.65e-12 | cataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr20 | + | 56521169 | 56521194 | 1.29e-16 | 6.65e-12 | cataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | + | 72076063 | 72076088 | 1.29e-16 | 6.65e-12 | cataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | + | 106620796 | 106620821 | 1.29e-16 | 6.65e-12 | cataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr11 | - | 128999216 | 128999241 | 1.29e-16 | 6.65e-12 | CATAAGACAGACACTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | + | 138486768 | 138486793 | 1.29e-16 | 6.65e-12 | cataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 80902833 | 80902858 | 2.87e-16 | 1.16e-11 | cataagacagacactcccagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | - | 30869390 | 30869415 | 2.87e-16 | 1.16e-11 | CATAAGACAGACACTCCCAGAGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr16 | - | 53384714 | 53384739 | 2.87e-16 | 1.16e-11 | CATAAGACAGACACTCCCAGAGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | - | 235869 | 235894 | 4.45e-16 | 1.68e-11 | CATAAGACAGACATTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | + | 75458163 | 75458188 | 6.03e-16 | 2.14e-11 | tataagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | + | 27686586 | 27686611 | 7.6e-16 | 2.27e-11 | cataagacagacactcccagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr11 | + | 94220008 | 94220033 | 7.6e-16 | 2.27e-11 | cataagacagacactcccagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 134262869 | 134262894 | 7.6e-16 | 2.27e-11 | cataagacagacactcccagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr13 | + | 52310093 | 52310118 | 9.94e-16 | 2.69e-11 | cgtaagacagacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr13 | - | 52502439 | 52502464 | 9.94e-16 | 2.69e-11 | CGTAAGACAGACACTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr2 | + | 39790613 | 39790638 | 1.74e-15 | 4.29e-11 | cataagacagacagtcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr11 | - | 27135960 | 27135985 | 1.74e-15 | 4.29e-11 | CATAAGACAGACAGTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | + | 56882597 | 56882622 | 2.47e-15 | 5.62e-11 | cataagacggacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr10 | - | 89620404 | 89620429 | 2.47e-15 | 5.62e-11 | CATAAGGCAGACACTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | + | 191994177 | 191994202 | 2.8e-15 | 6.11e-11 | tataagacagacactcccagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | - | 28262274 | 28262299 | 3.18e-15 | 6.7e-11 | TATAAGACAGACATTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | - | 84287571 | 84287596 | 4.9e-15 | 9.95e-11 | TATAAGACAGACACTCCCAGAGTGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | - | 62463422 | 62463447 | 6.03e-15 | 1.18e-10 | CATAAGACAGATACTCCCAGAGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 92795840 | 92795865 | 7.15e-15 | 1.35e-10 | cgtaagacagacactcccagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chrX | + | 13637430 | 13637455 | 7.81e-15 | 1.35e-10 | cataagacagacactctcagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 93833526 | 93833551 | 7.81e-15 | 1.35e-10 | cataagacagacactcccagagcggt |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr10 | + | 130117785 | 130117810 | 7.81e-15 | 1.35e-10 | cataagacaaacactcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 83251859 | 83251884 | 8.17e-15 | 1.36e-10 | cataaaacagacactcccagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 85714732 | 85714757 | 9.13e-15 | 1.44e-10 | cataagacggacactcccagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | - | 180828928 | 180828953 | 9.13e-15 | 1.44e-10 | CATAGGACAGACACTCCCAGAGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | + | 52761389 | 52761414 | 1.15e-14 | 1.76e-10 | tataagacagacattcccagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr13 | - | 66760827 | 66760852 | 1.22e-14 | 1.82e-10 | CATAAGATAGACACTCCCAGAGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | - | 80155670 | 80155695 | 1.39e-14 | 2.03e-10 | CATAAAACAGACACTCCCAGAGTGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | + | 27695463 | 27695488 | 1.47e-14 | 2.09e-10 | cataagacagacactcctagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr7 | - | 42555097 | 42555122 | 1.51e-14 | 2.1e-10 | CATAAGGCAGACACTCCCAGAGTGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr16 | - | 3206123 | 3206148 | 1.96e-14 | 2.66e-10 | CATAAGACAGACTCTCCCAGAGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | - | 184783906 | 184783931 | 2.14e-14 | 2.76e-10 | CATAAGACAGACACTTCCAGAGTGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | + | 197967775 | 197967800 | 2.14e-14 | 2.76e-10 | cataagacagacacttccagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | - | 25158002 | 25158027 | 2.27e-14 | 2.87e-10 | CACAAGACAGACAGTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr10 | + | 95733112 | 95733137 | 2.38e-14 | 2.94e-10 | taaaagacagacattcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr4 | + | 128265764 | 128265789 | 3.09e-14 | 3.73e-10 | cataagacagacactcccagagttgc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | + | 60093288 | 60093313 | 3.33e-14 | 3.94e-10 | cataggacagacattcccagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr14 | - | 90823678 | 90823703 | 3.86e-14 | 4.48e-10 | TGTAAGACAGACACTCCCAGAGTGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 155642704 | 155642729 | 4.92e-14 | 5.6e-10 | cgtaagacagacactcccaaagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 134284655 | 134284680 | 5.84e-14 | 6.51e-10 | cacaagacagatactcccagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | - | 105313927 | 105313952 | 1.56e-13 | 1.7e-09 | TATAAGACAGACATTCCTAGAGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 112329056 | 112329081 | 1.88e-13 | 2.02e-09 | cataaagcagacactcccagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | - | 56653952 | 56653977 | 7.05e-13 | 7.42e-09 | TATAAGACACACACTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 130644974 | 130644999 | 9.18e-13 | 9.48e-09 | taaaagacagacattcccaaagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr7 | - | 128239265 | 128239290 | 9.46e-13 | 9.6e-09 | CGTAGGATAGACATTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | - | 40919717 | 40919742 | 9.81e-13 | 9.78e-09 | TACAAGGCAGACATTCCCAGAGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 132109969 | 132109994 | 1.23e-12 | 1.19e-08 | cataagacagaaacttctagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | + | 93908320 | 93908345 | 1.24e-12 | 1.19e-08 | gtaaagacagacattcccagagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr11 | + | 9452205 | 9452230 | 1.25e-12 | 1.19e-08 | cataagacagacactcccaaagcgac |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | - | 27944788 | 27944813 | 2.04e-12 | 1.9e-08 | CACAACATAGACATTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | + | 15620283 | 15620308 | 2.91e-12 | 2.66e-08 | cacaagacagacattcccagaacggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | - | 203235077 | 203235102 | 2.04e-11 | 1.84e-07 | TAAAAGACAGATGTCCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | + | 15738871 | 15738896 | 3.13e-11 | 2.78e-07 | aaaaagacagacgttcccagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | - | 106077346 | 106077371 | 6.76e-11 | 5.91e-07 | TTAAAGACAGATGTTCCCAAAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | - | 57597758 | 57597783 | 1.23e-10 | 1.06e-06 | CATAAGACAGACACTCCCGAGCCGCC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr10 | - | 73258748 | 73258773 | 2.62e-10 | 2.23e-06 | TAAGAGAGAGACACTCCCAGAGCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 33101357 | 33101382 | 6.82e-10 | 5.7e-06 | tgtaattcagacactcccagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr11 | + | 110421860 | 110421885 | 4.2e-09 | 3.46e-05 | taaaagacagctgtccccaaagcggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 52200287 | 52200312 | 1.43e-07 | 0.00116 | ctcataagacacactcccagagtggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr2 | - | 112869738 | 112869763 | 7.22e-07 | 0.00578 | TAAAGGGCAGACACACCCCTGGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr16 | + | 2603418 | 2603443 | 2.93e-06 | 0.0231 | TAAAAGCCGGACTCTTCCGGTGAAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 99969724 | 99969749 | 4.02e-06 | 0.0313 | CTGCAAACAGACAGTCCCGCAGAGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 155794895 | 155794920 | 4.38e-06 | 0.0336 | cataagaagaaaatcttaaaagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 198837717 | 198837742 | 5.01e-06 | 0.0379 | CATAAAGAGTACAGTACTGGAGTGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr15 | + | 81601727 | 81601752 | 6.77e-06 | 0.0506 | taaaaggaagacactctcaaatagga |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 100890267 | 100890292 | 7.55e-06 | 0.0557 | tgcagggcaccaagtcccaaggctgc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | + | 56864181 | 56864206 | 8.18e-06 | 0.0592 | accatgacagagaccttcagagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr10 | - | 129587134 | 129587159 | 8.23e-06 | 0.0592 | CATAACTCAAAAACCCCTGGAGGGGG |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr2 | + | 32825474 | 32825499 | 8.7e-06 | 0.0618 | CAGAAAACTGATATTATTAAAGTGGT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr22 | - | 44773188 | 44773213 | 1.33e-05 | 0.0934 | TGAAAGACACAAGCTACCAAAGCTCA |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr22 | + | 32706285 | 32706310 | 1.63e-05 | 0.113 | aacaaagaggaatttttcaaagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | + | 183420725 | 183420750 | 1.65e-05 | 0.113 | agtaaggcacatcttcgcaaggcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chrX | + | 40050918 | 40050943 | 1.69e-05 | 0.114 | TTCAGAAAAAACACTCCTAGAGAGTT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 66387101 | 66387126 | 1.72e-05 | 0.115 | caatagatccacactaccagaactgc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chrX | - | 13637439 | 13637464 | 1.75e-05 | 0.116 | CTATAAACAGCCGCTCTGAGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chrX | + | 38061472 | 38061497 | 1.94e-05 | 0.127 | CATAAAATTGAAATTCCCACCCTGAC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr10 | - | 129483439 | 129483464 | 2.06e-05 | 0.133 | GACAATTCAGACACCAGCAGACCTGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr2 | + | 3575173 | 3575198 | 2.08e-05 | 0.133 | ACCAAGACACTCGTCCCCAGAGCCGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr7 | - | 131058845 | 131058870 | 2.12e-05 | 0.134 | CGCCAGACAGCTGCTCCGAGTGCGGG |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | + | 510660 | 510685 | 2.18e-05 | 0.136 | taaaatacagactttcctagatgaat |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | + | 21040205 | 21040230 | 2.22e-05 | 0.137 | taaaaaaCAAAATGTCCTAAGCTTAC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | + | 36941017 | 36941042 | 2.39e-05 | 0.146 | aatgaagtagtctttcccagacaggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | - | 72076072 | 72076097 | 2.57e-05 | 0.155 | TGTAAAATGGCCGCTCTGGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr20 | - | 45400573 | 45400598 | 2.61e-05 | 0.156 | TGCAGGGCACCAAGTCCTGAGGCAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | - | 23600356 | 23600381 | 2.88e-05 | 0.171 | AAAAAGAAAGACATTTTCAGAGGGAG |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 116859594 | 116859619 | 3.22e-05 | 0.188 | tatagaataaatgttaccaatcttgc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | - | 57566703 | 57566728 | 3.41e-05 | 0.198 | CCAAATACAATATCTCCCAGACCACT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | - | 37452497 | 37452522 | 3.53e-05 | 0.203 | TGAGAGAAAGACTTTCCCAAACCAAA |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | + | 53347852 | 53347877 | 3.6e-05 | 0.204 | CAAAGGTTGGAGACCGCCGAAGTGCC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | - | 82260304 | 82260329 | 3.66e-05 | 0.206 | CATAGGCCAAATGGTCTCAGAGGCCT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr18 | + | 47184685 | 47184710 | 3.85e-05 | 0.211 | CATGAATAAAATATTCCTGGACTGGT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 133378065 | 133378090 | 3.87e-05 | 0.211 | caaaataaggacattctcagataaac |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr9 | + | 129513277 | 129513302 | 3.88e-05 | 0.211 | gaaaagaaaaaCAGTCTTTggactgc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | + | 52806388 | 52806413 | 3.9e-05 | 0.211 | ctaaatacagacatttgtaaaacgcg |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 203095153 | 203095178 | 3.98e-05 | 0.213 | ataaagagaaaaaattttaaagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr4 | + | 88119977 | 88120002 | 4.08e-05 | 0.217 | ggaatgtcagacgtctttacagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | - | 81736286 | 81736311 | 4.15e-05 | 0.219 | GGCAAGGTAAACCCTGCCAGAAAAGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 225280813 | 225280838 | 4.24e-05 | 0.221 | tggagaacagaaggcattggagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | + | 19468535 | 19468560 | 4.33e-05 | 0.224 | gaaaagaagaaaatcttgaaagtagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 232794111 | 232794136 | 4.42e-05 | 0.225 | CACAGAAAGGAAACCTGCAGAGAAGT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 83251874 | 83251899 | 4.5e-05 | 0.225 | cccagagcagccatttatagaccacc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | + | 75458033 | 75458058 | 4.58e-05 | 0.225 | aacaggaaacagggtcccagagcaga |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr2 | - | 46643071 | 46643096 | 4.8e-05 | 0.225 | TCTAAAATAGCCGCTCTGGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | - | 27686595 | 27686620 | 4.83e-05 | 0.225 | TCTAAAATGGCCACTCTGGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | - | 27695472 | 27695497 | 4.83e-05 | 0.225 | TCTAAAATGGCCACTCTAGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | - | 33101366 | 33101391 | 4.83e-05 | 0.225 | TCTAAAATGGCCACTCTGGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | - | 112329065 | 112329090 | 4.83e-05 | 0.225 | TCTAAAATGGCCACTCTGGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | - | 134262878 | 134262903 | 4.83e-05 | 0.225 | TCTAAAATGGCCACTCTGGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr7 | + | 42555088 | 42555113 | 4.83e-05 | 0.225 | tctaaaatggccactctgggagtgtc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | + | 80155661 | 80155686 | 4.83e-05 | 0.225 | tctaaaatggccactctgggagtgtc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 84287562 | 84287587 | 4.83e-05 | 0.225 | tctaaaatggccactctgggagtgtc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | - | 33152358 | 33152383 | 4.97e-05 | 0.227 | CTATAAACAGCCGCTCTGGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr12 | - | 106620805 | 106620830 | 4.97e-05 | 0.227 | CTATAAACAGCCGCTCTGGGAGTGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr14 | + | 90823669 | 90823694 | 5e-05 | 0.227 | ctataaacggccactctgggagtgtc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr18 | + | 80022935 | 80022960 | 5.08e-05 | 0.229 | ctcagcctaaaggctcccaaggtacc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr13 | + | 52309964 | 52309989 | 5.15e-05 | 0.231 | aacaggaaacagagttccagagcaga |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr4 | - | 119690820 | 119690845 | 5.43e-05 | 0.241 | GATAGAATATGTATTCCCAGATCTAC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 154296013 | 154296038 | 5.53e-05 | 0.243 | taaaaattaactagttccagcctggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr4 | + | 2132569 | 2132594 | 5.56e-05 | 0.243 | ttaaaaacaatcatcttgaaactagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 77169205 | 77169230 | 5.61e-05 | 0.243 | CGTAGCACCAACACAGTCAGACCTGT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | - | 171854832 | 171854857 | 5.9e-05 | 0.254 | TTTAGGACAAACATTCACATGTGGGT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 110463283 | 110463308 | 5.94e-05 | 0.254 | ctaaatgtaaacagcctcaatgctcc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr17 | + | 61619782 | 61619807 | 6.29e-05 | 0.267 | caatagattgttattttcaaagtgct |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr9 | - | 92984219 | 92984244 | 6.7e-05 | 0.282 | GTCAAGTCAGAAAGTCCAAGCATGCC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | + | 247572 | 247597 | 6.91e-05 | 0.287 | tggaagaaagattttcaccaagaggc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr2 | - | 86661406 | 86661431 | 6.94e-05 | 0.287 | TGCAGCACTGATACTGTGAGAGTGGG |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | - | 83867902 | 83867927 | 6.97e-05 | 0.287 | GGAATCGCAGACAGTTTCAACATGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr4 | + | 83965237 | 83965262 | 7.18e-05 | 0.292 | cagacaacagcagctcccagccaagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 133377807 | 133377832 | 7.19e-05 | 0.292 | ttcaaggaagatatacacagagatcc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 226703324 | 226703349 | 7.36e-05 | 0.292 | CAATGAACGGACGGCGCCGGAGTCCC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | + | 36749004 | 36749029 | 7.45e-05 | 0.292 | CACAGTCCGGACATTCATAGGGTTTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr15 | + | 81918672 | 81918697 | 7.5e-05 | 0.292 | gacatgtcagagacgttcacagcagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 132395353 | 132395378 | 7.5e-05 | 0.292 | tgaaatataaaaactactagagcaaa |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | - | 93079337 | 93079362 | 7.53e-05 | 0.292 | GGTAGAATGAGCGTTCTTACACCGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 113391744 | 113391769 | 7.59e-05 | 0.292 | GGAAAAAGGGACTTTACTATAGAGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 110463042 | 110463067 | 7.62e-05 | 0.292 | agaaataaagtctttcccagacaagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr9 | + | 138085819 | 138085844 | 7.62e-05 | 0.292 | agaaataaagtctttcccagacaagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 94470017 | 94470042 | 7.66e-05 | 0.292 | TGTAGCACAAACTCTGACGCAGTAGT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr7 | + | 112573081 | 112573106 | 8.05e-05 | 0.305 | CTTAAAACACACCTTGTCACAGTATC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chrX | - | 55709960 | 55709985 | 8.16e-05 | 0.305 | GACAAGTCAGAAAGTCCAAGCATGTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 117625016 | 117625041 | 8.16e-05 | 0.305 | gacaagtcagaaagtccaagtatgtc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr6 | + | 85679619 | 85679644 | 8.25e-05 | 0.306 | CGACAAACACAAAATTCAAAAGCAGT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr2 | - | 178485063 | 178485088 | 8.28e-05 | 0.306 | TATAAAATACATATTTCTAAGCAAAC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr21 | + | 38887073 | 38887098 | 8.58e-05 | 0.312 | cttaaaataaacactcttgaattaag |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 225280903 | 225280928 | 8.69e-05 | 0.312 | tgaaataaagatatttccagataaac |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 155642719 | 155642744 | 8.7e-05 | 0.312 | cccaaagcagccgtttatagacctcc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr16 | - | 3206108 | 3206133 | 8.76e-05 | 0.312 | CCCAGAGCAGCCATTTATAGACCTCC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | - | 40919702 | 40919727 | 8.76e-05 | 0.312 | CCCAGAGCAGCCATTTATAGACCTCC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr3 | - | 193249015 | 193249040 | 8.81e-05 | 0.312 | TTTAAAAAAAACTTTCTCAGATAAAC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr8 | + | 9835888 | 9835913 | 8.83e-05 | 0.312 | gaggaaaaagacatcttcaaaggagc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr4 | - | 2132715 | 2132740 | 9.01e-05 | 0.316 | GATAGAATAAAGAGCTCTGAGCTGGC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr1 | + | 7791410 | 7791435 | 9.16e-05 | 0.319 | tggagggcatcatgtcccaaggctgc |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr22 | + | 29821695 | 29821720 | 9.49e-05 | 0.327 | TAATACTAATACACTCCCAAGGCAGA |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr20 | + | 746006 | 746031 | 9.51e-05 | 0.327 | gatgaaagagatatttccagataaac |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr18 | + | 79930377 | 79930402 | 9.62e-05 | 0.329 | gggaaaacaaagattcccagataaac |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | - | 32217937 | 32217962 | 9.82e-05 | 0.334 | CACAGAAGTGATTGCCCCGGCGTGGT |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr5 | + | 140295436 | 140295461 | 9.92e-05 | 0.336 | GCAAAGACAAACACTTCCAAATACTC |
CATAAGACAGACACTCCCAGAGCGGC | MEME-1 | chr19 | - | 34570267 | 34570292 | 9.98e-05 | 0.336 | CCCAGAGCGGCCATTTATAGACCACC |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_1 --bgfile /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif CATAAGACAGACACTCCCAGAGCGGC /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_1 | MEME file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml | sequence file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa |
background file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.