Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
CATAAGACAGACACTCCCAGAGCGGC 26 CATAAGACAGACACTCCCAGAGCGGC
AGGAGACCAGGGCDTATTT 19 AGGAGACCAGGGCGTATTT
TTTAKAGACCTCCCCC 16 TTTATAGACCTCCCCC
GTTTCTGRTGAGAARTCWGCTG 22 GTTTCTGATGAGAAGTCTGCTG
GYVCAGCATGACTCAGCAGGTTTGGAGYGCAGGY 34 GTCCAGCATGACTCAGCAGGTTTGGAGTGCAGGC
TCCCTTATCTWCAACY 16 TCCCTTATCTTCAACT
MWWGBAAGCCWGARGRCAVTGS 22 CATGGAAGCCAGAAGGCACTGG
GAGTGCACTCAGACCCAGYGGATTAACAT 29 GAGTGCACTCAGACCCAGTGGATTAACAT
TYAYRACTTACACAGACCATCTAYGACATGC 31 TCACAACTTACACAGACCATCTATGACATGC
AGAGAGAAACAAATATGCTCCAAATTTTGTT 31 AGAGAGAAACAAATATGCTCCAAATTTTGTT

Random model letter frequencies (/srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.275 C 0.225 G 0.225 T 0.275


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 - 32458980 32459005 1.29e-16 6.65e-12 CATAAGACAGACACTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 33152349 33152374 1.29e-16 6.65e-12 cataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 - 34570282 34570307 1.29e-16 6.65e-12 CATAAGACAGACACTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 + 38022666 38022691 1.29e-16 6.65e-12 cataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr2 + 46643062 46643087 1.29e-16 6.65e-12 cataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr11 + 47876063 47876088 1.29e-16 6.65e-12 cataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr20 + 56521169 56521194 1.29e-16 6.65e-12 cataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 + 72076063 72076088 1.29e-16 6.65e-12 cataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 + 106620796 106620821 1.29e-16 6.65e-12 cataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr11 - 128999216 128999241 1.29e-16 6.65e-12 CATAAGACAGACACTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 + 138486768 138486793 1.29e-16 6.65e-12 cataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 80902833 80902858 2.87e-16 1.16e-11 cataagacagacactcccagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 - 30869390 30869415 2.87e-16 1.16e-11 CATAAGACAGACACTCCCAGAGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr16 - 53384714 53384739 2.87e-16 1.16e-11 CATAAGACAGACACTCCCAGAGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 - 235869 235894 4.45e-16 1.68e-11 CATAAGACAGACATTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 + 75458163 75458188 6.03e-16 2.14e-11 tataagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 + 27686586 27686611 7.6e-16 2.27e-11 cataagacagacactcccagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr11 + 94220008 94220033 7.6e-16 2.27e-11 cataagacagacactcccagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 134262869 134262894 7.6e-16 2.27e-11 cataagacagacactcccagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr13 + 52310093 52310118 9.94e-16 2.69e-11 cgtaagacagacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr13 - 52502439 52502464 9.94e-16 2.69e-11 CGTAAGACAGACACTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr2 + 39790613 39790638 1.74e-15 4.29e-11 cataagacagacagtcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr11 - 27135960 27135985 1.74e-15 4.29e-11 CATAAGACAGACAGTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 + 56882597 56882622 2.47e-15 5.62e-11 cataagacggacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr10 - 89620404 89620429 2.47e-15 5.62e-11 CATAAGGCAGACACTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 + 191994177 191994202 2.8e-15 6.11e-11 tataagacagacactcccagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 - 28262274 28262299 3.18e-15 6.7e-11 TATAAGACAGACATTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 - 84287571 84287596 4.9e-15 9.95e-11 TATAAGACAGACACTCCCAGAGTGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 - 62463422 62463447 6.03e-15 1.18e-10 CATAAGACAGATACTCCCAGAGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 92795840 92795865 7.15e-15 1.35e-10 cgtaagacagacactcccagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chrX + 13637430 13637455 7.81e-15 1.35e-10 cataagacagacactctcagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 93833526 93833551 7.81e-15 1.35e-10 cataagacagacactcccagagcggt
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr10 + 130117785 130117810 7.81e-15 1.35e-10 cataagacaaacactcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 83251859 83251884 8.17e-15 1.36e-10 cataaaacagacactcccagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 85714732 85714757 9.13e-15 1.44e-10 cataagacggacactcccagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 - 180828928 180828953 9.13e-15 1.44e-10 CATAGGACAGACACTCCCAGAGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 + 52761389 52761414 1.15e-14 1.76e-10 tataagacagacattcccagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr13 - 66760827 66760852 1.22e-14 1.82e-10 CATAAGATAGACACTCCCAGAGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 - 80155670 80155695 1.39e-14 2.03e-10 CATAAAACAGACACTCCCAGAGTGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 + 27695463 27695488 1.47e-14 2.09e-10 cataagacagacactcctagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr7 - 42555097 42555122 1.51e-14 2.1e-10 CATAAGGCAGACACTCCCAGAGTGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr16 - 3206123 3206148 1.96e-14 2.66e-10 CATAAGACAGACTCTCCCAGAGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 - 184783906 184783931 2.14e-14 2.76e-10 CATAAGACAGACACTTCCAGAGTGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 + 197967775 197967800 2.14e-14 2.76e-10 cataagacagacacttccagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 - 25158002 25158027 2.27e-14 2.87e-10 CACAAGACAGACAGTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr10 + 95733112 95733137 2.38e-14 2.94e-10 taaaagacagacattcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr4 + 128265764 128265789 3.09e-14 3.73e-10 cataagacagacactcccagagttgc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 + 60093288 60093313 3.33e-14 3.94e-10 cataggacagacattcccagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr14 - 90823678 90823703 3.86e-14 4.48e-10 TGTAAGACAGACACTCCCAGAGTGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 155642704 155642729 4.92e-14 5.6e-10 cgtaagacagacactcccaaagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 134284655 134284680 5.84e-14 6.51e-10 cacaagacagatactcccagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 - 105313927 105313952 1.56e-13 1.7e-09 TATAAGACAGACATTCCTAGAGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 112329056 112329081 1.88e-13 2.02e-09 cataaagcagacactcccagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 - 56653952 56653977 7.05e-13 7.42e-09 TATAAGACACACACTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 130644974 130644999 9.18e-13 9.48e-09 taaaagacagacattcccaaagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr7 - 128239265 128239290 9.46e-13 9.6e-09 CGTAGGATAGACATTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 - 40919717 40919742 9.81e-13 9.78e-09 TACAAGGCAGACATTCCCAGAGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 132109969 132109994 1.23e-12 1.19e-08 cataagacagaaacttctagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 + 93908320 93908345 1.24e-12 1.19e-08 gtaaagacagacattcccagagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr11 + 9452205 9452230 1.25e-12 1.19e-08 cataagacagacactcccaaagcgac
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 - 27944788 27944813 2.04e-12 1.9e-08 CACAACATAGACATTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 + 15620283 15620308 2.91e-12 2.66e-08 cacaagacagacattcccagaacggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 - 203235077 203235102 2.04e-11 1.84e-07 TAAAAGACAGATGTCCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 + 15738871 15738896 3.13e-11 2.78e-07 aaaaagacagacgttcccagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 - 106077346 106077371 6.76e-11 5.91e-07 TTAAAGACAGATGTTCCCAAAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 - 57597758 57597783 1.23e-10 1.06e-06 CATAAGACAGACACTCCCGAGCCGCC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr10 - 73258748 73258773 2.62e-10 2.23e-06 TAAGAGAGAGACACTCCCAGAGCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 33101357 33101382 6.82e-10 5.7e-06 tgtaattcagacactcccagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr11 + 110421860 110421885 4.2e-09 3.46e-05 taaaagacagctgtccccaaagcggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 52200287 52200312 1.43e-07 0.00116 ctcataagacacactcccagagtggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr2 - 112869738 112869763 7.22e-07 0.00578 TAAAGGGCAGACACACCCCTGGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr16 + 2603418 2603443 2.93e-06 0.0231 TAAAAGCCGGACTCTTCCGGTGAAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 99969724 99969749 4.02e-06 0.0313 CTGCAAACAGACAGTCCCGCAGAGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 155794895 155794920 4.38e-06 0.0336 cataagaagaaaatcttaaaagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 198837717 198837742 5.01e-06 0.0379 CATAAAGAGTACAGTACTGGAGTGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr15 + 81601727 81601752 6.77e-06 0.0506 taaaaggaagacactctcaaatagga
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 100890267 100890292 7.55e-06 0.0557 tgcagggcaccaagtcccaaggctgc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 + 56864181 56864206 8.18e-06 0.0592 accatgacagagaccttcagagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr10 - 129587134 129587159 8.23e-06 0.0592 CATAACTCAAAAACCCCTGGAGGGGG
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr2 + 32825474 32825499 8.7e-06 0.0618 CAGAAAACTGATATTATTAAAGTGGT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr22 - 44773188 44773213 1.33e-05 0.0934 TGAAAGACACAAGCTACCAAAGCTCA
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr22 + 32706285 32706310 1.63e-05 0.113 aacaaagaggaatttttcaaagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 + 183420725 183420750 1.65e-05 0.113 agtaaggcacatcttcgcaaggcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chrX + 40050918 40050943 1.69e-05 0.114 TTCAGAAAAAACACTCCTAGAGAGTT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 66387101 66387126 1.72e-05 0.115 caatagatccacactaccagaactgc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chrX - 13637439 13637464 1.75e-05 0.116 CTATAAACAGCCGCTCTGAGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chrX + 38061472 38061497 1.94e-05 0.127 CATAAAATTGAAATTCCCACCCTGAC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr10 - 129483439 129483464 2.06e-05 0.133 GACAATTCAGACACCAGCAGACCTGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr2 + 3575173 3575198 2.08e-05 0.133 ACCAAGACACTCGTCCCCAGAGCCGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr7 - 131058845 131058870 2.12e-05 0.134 CGCCAGACAGCTGCTCCGAGTGCGGG
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 + 510660 510685 2.18e-05 0.136 taaaatacagactttcctagatgaat
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 + 21040205 21040230 2.22e-05 0.137 taaaaaaCAAAATGTCCTAAGCTTAC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 + 36941017 36941042 2.39e-05 0.146 aatgaagtagtctttcccagacaggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 - 72076072 72076097 2.57e-05 0.155 TGTAAAATGGCCGCTCTGGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr20 - 45400573 45400598 2.61e-05 0.156 TGCAGGGCACCAAGTCCTGAGGCAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 - 23600356 23600381 2.88e-05 0.171 AAAAAGAAAGACATTTTCAGAGGGAG
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 116859594 116859619 3.22e-05 0.188 tatagaataaatgttaccaatcttgc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 - 57566703 57566728 3.41e-05 0.198 CCAAATACAATATCTCCCAGACCACT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 - 37452497 37452522 3.53e-05 0.203 TGAGAGAAAGACTTTCCCAAACCAAA
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 + 53347852 53347877 3.6e-05 0.204 CAAAGGTTGGAGACCGCCGAAGTGCC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 - 82260304 82260329 3.66e-05 0.206 CATAGGCCAAATGGTCTCAGAGGCCT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr18 + 47184685 47184710 3.85e-05 0.211 CATGAATAAAATATTCCTGGACTGGT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 133378065 133378090 3.87e-05 0.211 caaaataaggacattctcagataaac
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr9 + 129513277 129513302 3.88e-05 0.211 gaaaagaaaaaCAGTCTTTggactgc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 + 52806388 52806413 3.9e-05 0.211 ctaaatacagacatttgtaaaacgcg
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 203095153 203095178 3.98e-05 0.213 ataaagagaaaaaattttaaagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr4 + 88119977 88120002 4.08e-05 0.217 ggaatgtcagacgtctttacagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 - 81736286 81736311 4.15e-05 0.219 GGCAAGGTAAACCCTGCCAGAAAAGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 225280813 225280838 4.24e-05 0.221 tggagaacagaaggcattggagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 + 19468535 19468560 4.33e-05 0.224 gaaaagaagaaaatcttgaaagtagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 232794111 232794136 4.42e-05 0.225 CACAGAAAGGAAACCTGCAGAGAAGT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 83251874 83251899 4.5e-05 0.225 cccagagcagccatttatagaccacc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 + 75458033 75458058 4.58e-05 0.225 aacaggaaacagggtcccagagcaga
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr2 - 46643071 46643096 4.8e-05 0.225 TCTAAAATAGCCGCTCTGGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 - 27686595 27686620 4.83e-05 0.225 TCTAAAATGGCCACTCTGGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 - 27695472 27695497 4.83e-05 0.225 TCTAAAATGGCCACTCTAGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 - 33101366 33101391 4.83e-05 0.225 TCTAAAATGGCCACTCTGGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 - 112329065 112329090 4.83e-05 0.225 TCTAAAATGGCCACTCTGGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 - 134262878 134262903 4.83e-05 0.225 TCTAAAATGGCCACTCTGGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr7 + 42555088 42555113 4.83e-05 0.225 tctaaaatggccactctgggagtgtc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 + 80155661 80155686 4.83e-05 0.225 tctaaaatggccactctgggagtgtc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 84287562 84287587 4.83e-05 0.225 tctaaaatggccactctgggagtgtc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 - 33152358 33152383 4.97e-05 0.227 CTATAAACAGCCGCTCTGGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr12 - 106620805 106620830 4.97e-05 0.227 CTATAAACAGCCGCTCTGGGAGTGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr14 + 90823669 90823694 5e-05 0.227 ctataaacggccactctgggagtgtc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr18 + 80022935 80022960 5.08e-05 0.229 ctcagcctaaaggctcccaaggtacc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr13 + 52309964 52309989 5.15e-05 0.231 aacaggaaacagagttccagagcaga
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr4 - 119690820 119690845 5.43e-05 0.241 GATAGAATATGTATTCCCAGATCTAC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 154296013 154296038 5.53e-05 0.243 taaaaattaactagttccagcctggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr4 + 2132569 2132594 5.56e-05 0.243 ttaaaaacaatcatcttgaaactagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 77169205 77169230 5.61e-05 0.243 CGTAGCACCAACACAGTCAGACCTGT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 - 171854832 171854857 5.9e-05 0.254 TTTAGGACAAACATTCACATGTGGGT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 110463283 110463308 5.94e-05 0.254 ctaaatgtaaacagcctcaatgctcc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr17 + 61619782 61619807 6.29e-05 0.267 caatagattgttattttcaaagtgct
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr9 - 92984219 92984244 6.7e-05 0.282 GTCAAGTCAGAAAGTCCAAGCATGCC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 + 247572 247597 6.91e-05 0.287 tggaagaaagattttcaccaagaggc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr2 - 86661406 86661431 6.94e-05 0.287 TGCAGCACTGATACTGTGAGAGTGGG
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 - 83867902 83867927 6.97e-05 0.287 GGAATCGCAGACAGTTTCAACATGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr4 + 83965237 83965262 7.18e-05 0.292 cagacaacagcagctcccagccaagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 133377807 133377832 7.19e-05 0.292 ttcaaggaagatatacacagagatcc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 226703324 226703349 7.36e-05 0.292 CAATGAACGGACGGCGCCGGAGTCCC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 + 36749004 36749029 7.45e-05 0.292 CACAGTCCGGACATTCATAGGGTTTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr15 + 81918672 81918697 7.5e-05 0.292 gacatgtcagagacgttcacagcagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 132395353 132395378 7.5e-05 0.292 tgaaatataaaaactactagagcaaa
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 - 93079337 93079362 7.53e-05 0.292 GGTAGAATGAGCGTTCTTACACCGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 113391744 113391769 7.59e-05 0.292 GGAAAAAGGGACTTTACTATAGAGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 110463042 110463067 7.62e-05 0.292 agaaataaagtctttcccagacaagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr9 + 138085819 138085844 7.62e-05 0.292 agaaataaagtctttcccagacaagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 94470017 94470042 7.66e-05 0.292 TGTAGCACAAACTCTGACGCAGTAGT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr7 + 112573081 112573106 8.05e-05 0.305 CTTAAAACACACCTTGTCACAGTATC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chrX - 55709960 55709985 8.16e-05 0.305 GACAAGTCAGAAAGTCCAAGCATGTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 117625016 117625041 8.16e-05 0.305 gacaagtcagaaagtccaagtatgtc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr6 + 85679619 85679644 8.25e-05 0.306 CGACAAACACAAAATTCAAAAGCAGT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr2 - 178485063 178485088 8.28e-05 0.306 TATAAAATACATATTTCTAAGCAAAC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr21 + 38887073 38887098 8.58e-05 0.312 cttaaaataaacactcttgaattaag
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 225280903 225280928 8.69e-05 0.312 tgaaataaagatatttccagataaac
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 155642719 155642744 8.7e-05 0.312 cccaaagcagccgtttatagacctcc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr16 - 3206108 3206133 8.76e-05 0.312 CCCAGAGCAGCCATTTATAGACCTCC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 - 40919702 40919727 8.76e-05 0.312 CCCAGAGCAGCCATTTATAGACCTCC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr3 - 193249015 193249040 8.81e-05 0.312 TTTAAAAAAAACTTTCTCAGATAAAC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr8 + 9835888 9835913 8.83e-05 0.312 gaggaaaaagacatcttcaaaggagc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr4 - 2132715 2132740 9.01e-05 0.316 GATAGAATAAAGAGCTCTGAGCTGGC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr1 + 7791410 7791435 9.16e-05 0.319 tggagggcatcatgtcccaaggctgc
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr22 + 29821695 29821720 9.49e-05 0.327 TAATACTAATACACTCCCAAGGCAGA
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr20 + 746006 746031 9.51e-05 0.327 gatgaaagagatatttccagataaac
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr18 + 79930377 79930402 9.62e-05 0.329 gggaaaacaaagattcccagataaac
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 - 32217937 32217962 9.82e-05 0.334 CACAGAAGTGATTGCCCCGGCGTGGT
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr5 + 140295436 140295461 9.92e-05 0.336 GCAAAGACAAACACTTCCAAATACTC
CATAAGACAGACACTCCCAGAGCGGC MEME-1 chr19 - 34570267 34570292 9.98e-05 0.336 CCCAGAGCGGCCATTTATAGACCACC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_1 --bgfile /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif CATAAGACAGACACTCCCAGAGCGGC /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_1 MEME file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml sequence file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF626.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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