# WARNING: this file is not sorted!
# db	id                         alt	consensus	 E-value	adj_p-value	log_adj_p-value	bin_location	bin_width	total_width	sites_in_bin	total_sites	p_success	 p-value	mult_tests
   1	CYTGGCACVRTGCCAR        MEME-1	CYTGGCACVRTGCCAR	2.8e-044	   3.9e-047	        -106.87	         0.0	       99	        485	         115	        150	  0.20412	1.6e-049	       242
   1	BTKTBTKTGTKTRTKTBTKTGTKTKKB MEME-2	BTKTBTKTGTKTRTKTBTKTGTKTKKB	9.1e-005	   1.2e-007	         -15.91	         0.0	       96	        474	         135	        405	  0.20253	5.2e-010	       236
   1	CACATCCTBHAGTARCTTT     MEME-3	CACATCCTBHAGTARCTTT	5.2e-013	   7.0e-016	         -34.89	         0.0	      104	        482	          52	         76	  0.21577	2.9e-018	       240
   2	CTTGGCWC               DREME-1	CTTGGCWC	1.8e-007	   2.5e-010	         -22.13	         0.0	       77	        493	          44	         92	  0.15619	1.0e-012	       246
   2	CYTGGCA                DREME-2	CCTGGCA	5.3e-014	   7.2e-017	         -37.17	         0.0	       56	        494	          60	        151	  0.11336	2.9e-019	       246
   3	M1970_1.02                NFIC	TGCCAA	2.4e-004	   3.3e-007	         -14.92	         0.0	       55	        495	         115	        588	  0.11111	1.3e-009	       247
   3	M5660_1.02                NFIA	TTGGCANNDTGCCAR	3.2e-022	   4.3e-025	         -56.10	         0.0	       64	        486	         114	        296	  0.13169	1.8e-027	       242
   3	M5662_1.02                NFIB	TTGGCAHNDTGCCAR	7.7e-023	   1.0e-025	         -57.52	         0.0	       64	        486	         115	        296	  0.13169	4.3e-028	       242
   3	M5664_1.02                NFIX	TTGGCANNNNGCCAR	7.8e-016	   1.1e-018	         -41.40	         0.0	       66	        486	         134	        427	  0.13580	4.3e-021	       242
   3	M6247_1.02               FOXO4	MRTAAACAA	9.3e0000	   1.3e-002	          -4.37	         0.0	       48	        492	          81	        532	  0.09756	5.2e-005	       245
##
# Detailed descriptions of columns in this file:
#
# db:	The name of the database (file name) that contains the motif.
# id:	A name for the motif that is unique in the motif database file.
# alt:	An alternate name of the motif that may be provided
#	in the motif database file.
# consensus:	A consensus sequence computed from the motif.
# E-value:	The expected number motifs that would have least one.
#	region as enriched for best matches to the motif as the reported region.
#	The E-value is the p-value multiplied by the number of motifs in the
#	input database(s).
# adj_p-value:	The probability that any tested region would be as enriched for
#	best matches to this motif as the reported region is.
#	By default the p-value is calculated by using the one-tailed binomial
#	test on the number of sequences with a match to the motif 
#	that have their best match in the reported region, corrected for
#	the number of regions and score thresholds tested.
#	The test assumes that the probability that the best match in a sequence
#	falls in the region is the region width divided by the
#	number of places a motif
#	can align in the sequence (sequence length minus motif width plus 1).
#	When CentriMo is run in discriminative mode with a negative
#	set of sequences, the p-value of a region is calculated
#	using the Fisher exact test on the 
#	enrichment of best matches in the positive sequences relative
#	to the negative sequences, corrected
#	for the number of regions and score thresholds tested.
#	The test assumes that the probability that the best match (if any)
#	falls into a given region
#	is the same for all positive and negative sequences.
# log_adj_p-value:	Log of adjusted p-value.
# bin_location:	Location of the center of the most enriched region.
# bin_width:	The width (in sequence positions) of the most enriched region.
#	A best match to the motif is counted as being in the region if the
#	center of the motif falls in the region.
# total_width:	The window maximal size which can be reached for this motif:
#		rounded(sequence length - motif length +1)/2
# sites_in_bin:	The number of (positive) sequences whose best match to the motif
#	falls in the reported region.
#	Note: This number may be less than the number of
#	(positive) sequences that have a best match in the region.
#	The reason for this is that a sequence may have many matches that score
#	equally best.
#	If n matches have the best score in a sequence, 1/n is added to the
#	appropriate bin for each match.
# total_sites:	The number of sequences containing a match to the motif
#	above the score threshold.
# p_success:	The probability of falling in the enriched window:
#		bin width / total width
# p-value:	The uncorrected p-value before it gets adjusted to the
#	number of multiple tests to give the adjusted p-value.
# mult_tests:	This is the number of multiple tests (n) done for this motif.
#	It was used to correct the original p-value of a region for
#	multiple tests using the formula:
#		p' = 1 - (1-p)^n where p is the uncorrected p-value.
#	The number of multiple tests is the number of regions
#	considered times the number of score thresholds considered.
#	It depends on the motif length, sequence length, and the type of
#	optimizations being done (central enrichment, local enrichment,
#	score optimization).