Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
AAATAAATAAATAAATAAATAAATAAATAAA 31 AAATAAATAAATAAATAAATAAATAAATAAA
YTYTSWSWCDSWSTCTCDCTCT 22 TTTTGAGACTGAGTCTCTCTCT
AGAGAGAGAGAGAGAGAGAGAG 22 AGAGAGAGAGAGAGAGAGAGAG
ATTTATTTATTT 12 ATTTATTTATTT
CTCTCTCTC 9 CTCTCTCTC
WAAATAAAW 9 TAAATAAAT
WCWCWCWCWCWCWCWCWCWCWC 22 TCACTCACTCACTCTCTCACTC
TCTYTCTCTYTYTCYY 16 TCTCTCTCTTTCTCTC
GGCGYGGTGGCWCACGCCTGTA 22 GGCGCGGTGGCTCACGCCTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA 47 CAGTATATAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.280 C 0.220 G 0.220 T 0.280


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2279 2325 7.43e-28 3.95e-22 cagtatacaatatatattttgggtactttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 376 422 3.23e-26 8.47e-21 cagtatataatatatattttgggtcctttgatattgtatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3238 3284 4.79e-26 8.47e-21 cagtatataatatgtattatgggtactttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 501 547 6.11e-25 5.79e-20 cagtatataatatatactttgggtactttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2858 2904 6.11e-25 5.79e-20 cagtatatagtatatattttgggtactttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2900 2946 6.55e-25 5.79e-20 cagtatacaatatatatttcaggtactgtgatattttatatacacta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3363 3409 4.86e-23 2.82e-18 cagtttacaatatatattttgggtactttgatattttatggacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2481 2527 5.04e-23 2.82e-18 cagtatataatacatatttttggtactttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3112 3158 5.83e-23 2.82e-18 cagtatataatacataatttgggtactttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3112 3158 5.83e-23 2.82e-18 cagtatataatacataatttgggtactttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3321 3367 5.83e-23 2.82e-18 cagtatacaatatatattttggctactttgatattttatgtacagtt
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 334 380 7.15e-23 3.16e-18 cagtatataatatatattttggatattttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3196 3242 9.66e-23 3.95e-18 cagtatataatatttattttgtgtcctttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 292 338 1.06e-19 3.71e-15 cggtatatagtatatactttgggtactttggtattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2069 2115 1.06e-19 3.71e-15 cagtatataatacatactttgggtactttgatattttatgtgcagca
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 418 464 1.19e-19 3.71e-15 cagtacataatacatattttgtgtactttgatattttatgtacagca
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2987 3033 1.19e-19 3.71e-15 cagtatatgatatatagtttgagtactttgatattttatgtacagtt
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3154 3200 1.3e-19 3.85e-15 cagtatgtaatatatattttgagtatttggatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2402 2448 2.1e-19 5.86e-15 ctgtatataatatgtagtttgagtactttgatattttatgtacagtt
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2360 2406 2.41e-19 6.4e-15 cagtatataatatacagtttgggtactttgacattttatatactgta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3070 3116 2.38e-18 5.74e-14 cagtatataatgcatattttgggtactctgataatttacgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3070 3116 2.38e-18 5.74e-14 cagtatataatgcatattttgggtactctgataatttacgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2195 2241 2.62e-18 6.05e-14 cagcatataatatatatttggtgtactttgagattttatgtacagaa
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 543 589 2.76e-18 6.11e-14 cagtatataatacatactttgggtactttgatattttatgtgcagcg
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 250 296 3.08e-18 6.53e-14 cagtgtataatacatattttggctactttgatattttttgtacggta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2111 2157 6.34e-18 1.29e-13 cagcatataatatatatttgatgtaccttcatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2237 2283 1.53e-17 3e-13 cagaatataatatatctttcatgtaccttcatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2153 2199 5.94e-17 1.13e-12 cagtatataatatatatttgggcaactttaatatattatgtacagca
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3405 3451 6.26e-17 1.15e-12 cagtatataatacacagtttgggtactttggtattttatgtagagtt
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 585 631 1.21e-16 2.07e-12 cagcgtataatatatatttgatgtaccttcatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2816 2862 1.21e-16 2.07e-12 caggatataatatatatttgatgtaccttcatattttatggacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2774 2820 1.28e-15 2.12e-11 cagtacacaatatctaataggtgtagtttgatattttatgtacagga
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2691 2737 7.48e-15 1.2e-10 cagcatgtaatatgaatttgaagtaccttcatattttatatacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2945 2991 1.58e-14 2.47e-10 tatataataatacacagtttgggtactttgatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2439 2485 1.09e-09 1.66e-05 atgtacagtttattataaatggttactttcatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2151 2197 9.25e-08 0.00136 CTGTACATAATATATTAAAGTTGCCCAAATATATATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2900 2946 2.98e-07 0.00428 TAGTGTATATAAAATATCACAGTACCTGAAATATATATTGTATACTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 124741284 124741330 3.54e-07 0.00495 CATGCTTAAATGTCTATTTTTGGTCTGTTTATTCTGTTTCTTCACTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2772 2818 4.7e-07 0.0064 CTGTACATAAAATATCAAACTACACCTATTAGATATTGTGTACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3446 3492 7.91e-07 0.0105 agagtttattataaatggttgggtactttcatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3280 3326 8.53e-07 0.0108 cagtatataatatatatttggggtattttatattttatgtacagtat
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2318 2364 8.53e-07 0.0108 gtacagtatgctatatattcgggtactttgatatattatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 - 87555198 87555244 1.76e-06 0.0217 GTGAATAAAAAATATATTTTTGGACCTCCAAAAATGTCTAATAATTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2400 2446 2.39e-06 0.0289 CTGTACATAAAATATCAAAGTACTCAAACTACATATTATATACAGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2358 2404 3.02e-06 0.0356 CAGTATATAAAATGTCAAAGTACCCAAACTGTATATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2393 2439 3.36e-06 0.0388 ttttatatactgtatataatatgtagtttgagtactttgatatttta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 208 254 3.43e-06 0.0388 acagtttattataaatgtttgggtactttcatatattatgtacagtg
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 460 506 3.68e-06 0.0407 cagcatataatatatatttggggtattttatattttatgtacagtat
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr8 - 37360695 37360741 4.31e-06 0.0467 CAGCATATGAATCTTTTAGCCGGCACTCTGCTGTCATATAAACAGTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 + 115311408 115311454 6.25e-06 0.0663 TTGGATAGattttttattttattttattttattttatttattcattt
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr17 + 49136434 49136480 8.81e-06 0.0835 TTTTATATTTTATGTATATTCAGTAATTTGATTTTTTTAAAAGGTGC
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3319 3365 9.05e-06 0.0835 CTGTACATAAAATATCAAAGTAGCCAAAATATATATTGTATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 + 2028693 2028739 9.27e-06 0.0835 CAGTCTACAAAAAGAGCCTCAGAATGCTTTAACTTTCATGTAGAATA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2367 2413 9.57e-06 0.0835 taatatacagtttgggtactttgacattttatatactgtatataata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 332 378 9.71e-06 0.0835 CTGTACATAAAATATCAAAATATCCAAAATATATATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 499 545 9.71e-06 0.0835 CTGTACATAAAATATCAAAGTACCCAAAGTATATATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2985 3031 9.71e-06 0.0835 CTGTACATAAAATATCAAAGTACTCAAACTATATATCATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3110 3156 9.71e-06 0.0835 CTGTACATAAAATATCAAAGTACCCAAATTATGTATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3110 3156 9.71e-06 0.0835 CTGTACATAAAATATCAAAGTACCCAAATTATGTATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3152 3198 9.71e-06 0.0835 CTGTACATAAAATATCCAAATACTCAAAATATATATTACATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3236 3282 9.71e-06 0.0835 CTGTACATAAAATATCAAAGTACCCATAATACATATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 374 420 9.92e-06 0.0835 CTGTACATACAATATCAAAGGACCCAAAATATATATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3194 3240 9.92e-06 0.0835 CTGTACATAAAATATCAAAGGACACAAAATAAATATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 - 73254581 73254627 1.07e-05 0.0887 CATCATACAATACACTCTTTAGCACCTTGCCATTTTTTAACTCAATA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 + 134850872 134850918 1.11e-05 0.091 AAGCTGAGACTGTATATCCTGAGTTCTCTGATAGATTATGAATGTTc
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2153 2199 1.34e-05 0.108 TGCTGTACATAATATATTAAAGTTGCCCAAATATATATTATATACTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr8 + 118066269 118066315 1.38e-05 0.11 atgaatagtaaatatattttctcttccttattattttcttaataaca
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3028 3074 1.5e-05 0.113 acagtttattataaatgttttgttaatttcatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3028 3074 1.5e-05 0.113 acagtttattataaatgttttgttaatttcatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr17 + 35860388 35860434 1.5e-05 0.113 ctcaaaaaaaaaaaaaaaacaagaaCTTTGCTATTTTTCACACTCTC
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr1 - 165854808 165854854 1.52e-05 0.113 AAGTATAAAGGAAAGATTTAGAGGACCAGAATAAAGCATGGAAGGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 - 89779030 89779076 1.6e-05 0.117 TAATTTGTATTAGGTATTATAAATAACCTGGAGATTTAAATAAAGAA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 66760050 66760096 1.6e-05 0.117 AATAAATAAATAAATAAATAGGGGATATTGTCACTGCATGTAAATTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr13 + 75904197 75904243 1.75e-05 0.125 TGGTAGATAATGCCATTTATGGGTGATTTCCTGTTCTCTCTAATGCA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr21 - 29969516 29969562 1.85e-05 0.131 AAATAGACAGTATATTTCTTTGTGTCTGGTTTCTTTTGCTTAGAATA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2907 2953 1.98e-05 0.138 caatatatatttcaggtactgtgatattttatatacactatataata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr10 + 86796465 86796511 2.15e-05 0.148 AATTATATCACATAAATTTAGGCACatttatttatttatttatttat
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrX + 23742118 23742164 2.27e-05 0.154 TAGTTTAACAAAGGTTTTTTGTTTGTTTTTAAGTACTATAAACAAGA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr10 + 101442068 101442114 2.31e-05 0.154 AAGCATAGAAAAGCATATGTAAGCACTTTGACAAATGACATAATGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2865 2911 2.34e-05 0.154 tagtatatattttgggtactttgatattttatgtacagtatacaata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 43014721 43014767 2.34e-05 0.154 TTTATTCTAAGATAAAATTTGTGAATTTTGCTAAACTATATATATTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrX + 141443898 141443944 2.38e-05 0.154 aggtttgtacattttatgtgaagtaatgtggtattaactgaaaatta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 416 462 2.43e-05 0.155 CTGTACATAAAATATCAAAGTACACAAAATATGTATTATGTACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr20 - 2647084 2647130 2.48e-05 0.155 AAATAAATAAAATAAATTCAGTGCCTTGGGAGAGCTTCGGGAAAGGA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr10 - 88419829 88419875 2.48e-05 0.155 CACCATGCATGGCTAATTTTTTGTACTTTTTTTTAGTAGAGACAGGG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr11 + 123279354 123279400 2.71e-05 0.166 atttatttattttattttatttttattttatttatttatttaattta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3161 3207 2.77e-05 0.166 taatatatattttgagtatttggatattttatgtacagtatataata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr4 - 56180608 56180654 2.77e-05 0.166 TGATAGGTAGTTGTTATTTTATTTCCTTTGATCTCATATTTAACTTC
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr22 - 24325446 24325492 2.79e-05 0.166 CAGAATAAAATGCACTAAAAGTGTCTGTAGGGATTTGATTTAAACTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2479 2525 2.81e-05 0.166 CTGTACATAAAATATCAAAGTACCAAAAATATGTATTATATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 92610448 92610494 2.9e-05 0.169 CTTTTTTTCATGTGTTTGTTAGGCACATAAATGTCTTCTTTTGAGAA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr16 - 46733 46779 2.95e-05 0.169 AAATGTATAAGATACTATTTATTTATTTATTTATTTTATTTATTTAT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 341 387 2.99e-05 0.169 taatatatattttggatattttgatattttatgtacagtatataata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr7 - 155519645 155519691 3.01e-05 0.169 CACAAAAGATTTTATTTAACAGGAACAATATTAACTTATTAATAGTC
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 515 561 3.03e-05 0.169 AAGTATGTATTATATACTGTACATAAAATATCAAAGTACCCAAAGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2193 2239 3.09e-05 0.171 CTGTACATAAAATCTCAAAGTACACCAAATATATATTATATGCTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 306 352 3.26e-05 0.175 AAATATATATTATATACTGTACATAAAATACCAAAGTACCCAAAGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3084 3130 3.26e-05 0.175 AATTATGTATTATATACTGTACGTAAATTATCAGAGTACCCAAAATA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3084 3130 3.26e-05 0.175 AATTATGTATTATATACTGTACGTAAATTATCAGAGTACCCAAAATA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2277 2323 3.61e-05 0.191 CTGTACATAAAATATCAAAGTACCCAAAATATATATTGTATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr19 + 40103896 40103942 3.77e-05 0.198 aagtcaggcacaatgagtatatgtactgtgtgattccatttatacaa
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 92610552 92610598 3.91e-05 0.203 TATTATACTTTAAGTTTTAGGGTACATGTGCTATTCTAACAAGCATG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr12 - 110265682 110265728 3.95e-05 0.203 TTACAAATTTTGTACATATCCGGCATTTTGTTTTGTTTTACTCACTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 - 69983195 69983241 4e-05 0.204 TAACGAAAATTATGTAAGAACTCTACAGTGAAAATTAAAATACATTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr1 + 86774788 86774834 4.11e-05 0.208 CAGGAGATAAGGTGCCTTTTATGAAAGTTCAGATTCCAGACCTATTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr17 + 49136408 49136454 4.26e-05 0.213 AAGTTTTAATTTTTTAAGGGCGCAGATTTTATATTTTATGTATATTC
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 126819415 126819461 4.34e-05 0.213 TAATATGTAAAGTCTCTTTCAGCCAGTTTGGCATTTTACAATATATT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr10 - 15796041 15796087 4.5e-05 0.213 TAACATCATCTCTGTGTTTTATGTCTTCATATGTTTGAAATACATTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 599 645 4.55e-05 0.213 AAATATATATTATATACTGTACATAAAATATGAAGGTACATCAAATA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2125 2171 4.55e-05 0.213 AAATATATATTATATACTGTACATAAAATATGAAGGTACATCAAATA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr12 + 96428812 96428858 4.56e-05 0.213 ataaataaataaaGGATGTTATGCAATGTGATATGTAGAATACATAA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 459 505 4.62e-05 0.213 acagcatataatatatatttggggtattttatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3279 3325 4.62e-05 0.213 acagtatataatatatatttggggtattttatattttatgtacagta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 250 296 4.64e-05 0.213 TACCGTACAAAAAATATCAAAGTAGCCAAAATATGTATTATACACTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr12 - 110265730 110265776 4.64e-05 0.213 AACAATGCAAACTGTATTATCTGGTATTTTTCATAGTTTACACAAAA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 585 631 4.7e-05 0.213 TACTGTACATAAAATATGAAGGTACATCAAATATATATTATACGCTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2279 2325 4.7e-05 0.213 TACTGTACATAAAATATCAAAGTACCCAAAATATATATTGTATACTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 + 43088714 43088760 4.92e-05 0.221 aaataaataaataaataaaGAGTTATGGTGAAACTATATGTAATCTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2733 2779 5.03e-05 0.224 cagtatacaatatatatttgggggatttaatatattatgtacagtac
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrX - 63439900 63439946 5.21e-05 0.23 CTGTTTATCAATTCTTTTTGTTTTATTTTGTTTTGTTTTGTTTATCA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2372 2418 5.44e-05 0.238 CTACATATTATATACAGTATATAAAATGTCAAAGTACCCAAACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 66760017 66760063 5.48e-05 0.238 CTGCATGTAAATTATATTTCAGCAAAGTTTATTAATAAAATTTTCAA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr17 - 79430489 79430535 5.72e-05 0.238 CAGTATAAAGCACATACTATTTATACTTTAGAAACAAAAGTACTTGC
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 3328 3374 5.77e-05 0.238 caatatatattttggctactttgatattttatgtacagtttacaata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 - 27840780 27840826 5.78e-05 0.238 ACTTCAACAATGTATAATTTGGTTTTATTTTCATTTTATTTATTTAT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrX + 130516147 130516193 5.78e-05 0.238 TATTCTATCAATCTGTATTTTGCTAGTTTCTCATTTTATCTCCAGTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 376 422 5.82e-05 0.238 TACTGTACATACAATATCAAAGGACCCAAAATATATATTATATACTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2235 2281 5.84e-05 0.238 CTGTACATAAAATATGAAGGTACATGAAAGATATATTATATTCTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr1 - 8720730 8720776 5.93e-05 0.238 GGCTAGATTTTTAATTTTAATGGAGCCTGGATGTTTCATGTACAAGT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr1 - 35380179 35380225 6.05e-05 0.238 TAGTTAATAAACTGCTTTATACTCATGTTTGTATCTTAAAGAGATTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr21 - 29969356 29969402 6.06e-05 0.238 CATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATATTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr21 - 29969563 29969609 6.1e-05 0.238 ATCTTTTTAAATTTACTTTTGCCCATTTTAAAATTTGATTTACATAA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr10 + 86796489 86796535 6.1e-05 0.238 CatttatttatttatttatttatttatttatttatttatttTTAGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2481 2527 6.14e-05 0.238 TACTGTACATAAAATATCAAAGTACCAAAAATATGTATTATATACTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2858 2904 6.14e-05 0.238 TACTGTACATAAAATATCAAAGTACCCAAAATATATACTATATACTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 3238 3284 6.14e-05 0.238 TACTGTACATAAAATATCAAAGTACCCATAATACATATTATATACTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 175559125 175559171 6.15e-05 0.238 CAGTTTCCAAAATTGTTTCTCTCCTCTTTAAGACTTTTAATTAATTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr12 - 41191688 41191734 6.35e-05 0.244 TGTACTGGAATATTTGCATTAAGAAATCTGATATTTGATCACAAGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2444 2490 6.6e-05 0.252 cagtttattataaatggttactttcatattttatgtacagtatataa
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2881 2927 6.79e-05 0.257 CAGTACCTGAAATATATATTGTATACTGTACATAAAATATCAAAGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr1 - 109801370 109801416 7.01e-05 0.264 AAATAAATAAAAGGTTATCTAATGCATTTAGTATGGGTTATAAAGTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr7 + 120806804 120806850 7.11e-05 0.265 CACCTAATGATATATGTACAGTCTATGTTGATGATAGAAATGTAGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr12 + 131454445 131454491 7.13e-05 0.265 gattttaaaattaaaattattgtgatttttatcatttaattATTTTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrX + 76543349 76543395 7.2e-05 0.265 tcttttttcatatgtttgttggcctcataaatgttttcttttgagaa
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr16 + 46900 46946 7.29e-05 0.267 AAGTATGTAGTCTATTCTGGGATCACTGTGATTTGGGGTTTGCTTTC
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr13 + 75904050 75904096 7.46e-05 0.271 CAGTCATATCTTTGTAATTTAGAATGCTGTATTTTATATTCAGAGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr1 + 113113453 113113499 7.58e-05 0.273 CAGTTATTATTAttattttttttaagtttgttggtttgtattgttta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr10 - 15796492 15796538 7.61e-05 0.273 AAATGTGGAAAAAATGGTTTGGGTTTTGTTTTTGTGTTTGTTTTGTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr9 + 132358009 132358055 7.78e-05 0.277 aaaattgttttagctacttaaggtcccttgctattccatgtgaatat
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2197 2243 7.82e-05 0.277 gcatataatatatatttggtgtactttgagattttatgtacagaata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 348 394 7.95e-05 0.279 AAATATATATTATATACTGTACATAAAATATCAAAATATCCAAAATA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr14 + 29929133 29929179 8.34e-05 0.29 AAACAAACATTTTGTATTTTGTATAGCTTATTTTGTTCTGTtttatt
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr7 + 140567402 140567448 8.36e-05 0.29 CAATAGGTTATGTAATTATCAGCTCAAGTACTTTTTTCTAATCCCCA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr1 + 196145221 196145267 8.53e-05 0.293 caccttagaagaaatattgttttcaatttgagtttgtctaatgttta
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 + 138866394 138866440 8.66e-05 0.293 CAGTAAACTTAATGTTTATGATGTTTTTACACCTCTTCTGTGTGGTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr7 - 140567347 140567393 8.71e-05 0.293 CACAATTCCACATGGACTCATGGTCATTTCAGGCTCTTTGCTCACTC
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 - 43014686 43014732 8.75e-05 0.293 CTATATATATTTATTTATTTATTTATTTTATTTATTTATTTATTTTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 + 299 345 8.82e-05 0.293 tagtatatactttgggtactttggtattttatgtacagtatataata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 + 2781 2827 8.82e-05 0.293 caatatctaataggtgtagtttgatattttatgtacaggatataata
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr10 - 103359687 103359733 8.82e-05 0.293 CAGTATATTTTCTTCTTTCTCTTTCTTTTCTTTTTATTTATTTATTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 + 10798635 10798681 9.12e-05 0.3 TCATATAAAATATATTTTTCAAAAACAAAATCATATTATTTGTATAA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 399 445 9.27e-05 0.3 AAGTACACAAAATATGTATTATGTACTGTACATACAATATCAAAGGA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr4 - 56180690 56180736 9.27e-05 0.3 GTCAATACAATGCTTATCATAGCAACTAAGACAACTAATGAGTAGTT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr5 + 87284802 87284848 9.27e-05 0.3 TAGTTAATATTAGGATTCCTGAATATCTTCCTTTTGTATGGTCATTG
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr11 + 123279363 123279409 9.39e-05 0.301 ttttattttatttttattttatttatttatttaatttatttatttat
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr8 - 140473188 140473234 9.49e-05 0.301 TATTTTTTAATTAATTATTTATTTATTTTGTTTATTTATTTATTTAT
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270466v1 - 248 294 9.54e-05 0.301 CCGTACAAAAAATATCAAAGTAGCCAAAATATGTATTATACACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2898 2944 9.59e-05 0.301 GTGTATATAAAATATCACAGTACCTGAAATATATATTGTATACTGTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr6 - 27840773 27840819 9.59e-05 0.301 CAATGTATAATTTGGTTTTATTTTCATTTTATTTATTTATTTATTTA
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chr15 + 70865977 70866023 9.73e-05 0.304 caatatgcatcatatttttgactctgtttaacatctgaatttcccaa
CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA MEME-10 chrUn_KI270467v1 - 2176 2222 9.89e-05 0.307 AAGTACACCAAATATATATTATATGCTGTACATAATATATTAAAGTT

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_22 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif CAGTATAYAATATATATTTTGGGTACTTTGATATTTTATGTACAGTA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_22 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF596.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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