Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background):
A 0.278 C 0.222 G 0.222 T 0.278


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M2310_1.02 RUNX2 chr19 - 34218434 34218448 1.31e-08 0.00746 CAAACCACAAAACCC
M2310_1.02 RUNX2 chr12 - 12350222 12350236 1.67e-07 0.0473 CTAACCACAAAACCC
M2310_1.02 RUNX2 chr5 - 36370196 36370210 3.61e-07 0.0682 AAAACCACACACCAC
M2310_1.02 RUNX2 chr1 - 210081669 210081683 6.02e-07 0.0853 AAAACCACAGACATA
M2310_1.02 RUNX2 chr12 + 110744823 110744837 2e-06 0.227 gaaaccacagccctc
M2310_1.02 RUNX2 chr1 - 113935203 113935217 2.58e-06 0.24 CCAACCACAGACACT
M2310_1.02 RUNX2 chr19 + 39304157 39304171 2.98e-06 0.24 cagaccacataccac
M2310_1.02 RUNX2 chr15 + 69897962 69897976 5.05e-06 0.24 ctcaccacaacccaa
M2310_1.02 RUNX2 chr17 + 58387974 58387988 6.42e-06 0.24 CCCACCACACACACC
M2310_1.02 RUNX2 chr17 + 17838241 17838255 7.01e-06 0.24 GAAGCCACAGAGCCC
M2310_1.02 RUNX2 chr10 + 72580547 72580561 8.06e-06 0.24 ctcaccacaacctcc
M2310_1.02 RUNX2 chr19 - 36070555 36070569 8.99e-06 0.24 GAAACCACAACGCTC
M2310_1.02 RUNX2 chr19 - 36070555 36070569 8.99e-06 0.24 GAAACCACAACGCTC
M2310_1.02 RUNX2 chr11 + 27389081 27389095 9.52e-06 0.24 AAAACCACAATGAAA
M2310_1.02 RUNX2 chr16 - 28926658 28926672 1.01e-05 0.24 CACCCCACAGGCCCC
M2310_1.02 RUNX2 chr6 - 31834407 31834421 1.1e-05 0.24 AAAACCAAAAACCCA
M2310_1.02 RUNX2 chr4 + 4258153 4258167 1.11e-05 0.24 caaaccacatggcac
M2310_1.02 RUNX2 chr5 - 31335711 31335725 1.14e-05 0.24 ACAACCACAACAAAA
M2310_1.02 RUNX2 chr1 - 47691446 47691460 1.22e-05 0.24 AAAACCAAAGACCAC
M2310_1.02 RUNX2 chr16 + 67890738 67890752 1.33e-05 0.24 ctagccacagaaaaa
M2310_1.02 RUNX2 chr1 + 8626556 8626570 1.36e-05 0.24 ccaaccacaaacatt
M2310_1.02 RUNX2 chr17 - 81507968 81507982 1.38e-05 0.24 AAAACCCCAAACCCC
M2310_1.02 RUNX2 chr6 - 47745295 47745309 1.43e-05 0.24 AACACCACACACCAG
M2310_1.02 RUNX2 chr5 - 81714079 81714093 1.43e-05 0.24 AACACCACACACCAG
M2310_1.02 RUNX2 chr15 - 82534543 82534557 1.48e-05 0.24 ATAACCACAATACAA
M2310_1.02 RUNX2 chr10 + 16686232 16686246 1.5e-05 0.24 GAAACCACAAACAGT
M2310_1.02 RUNX2 chr1 - 11179903 11179917 1.51e-05 0.24 AAAACCACATTCCAA
M2310_1.02 RUNX2 chr19 + 4791035 4791049 1.65e-05 0.24 aaaaccaaaaaaCCC
M2310_1.02 RUNX2 chr7 - 37633180 37633194 1.67e-05 0.24 CCAACCACAATAAAA
M2310_1.02 RUNX2 chr1 + 8626594 8626608 1.67e-05 0.24 ctgaccacagacatg
M2310_1.02 RUNX2 chr6 + 43322179 43322193 1.78e-05 0.24 aaaaccacaacactt
M2310_1.02 RUNX2 chr17 + 81508062 81508076 1.88e-05 0.24 caaacctcaaactcc
M2310_1.02 RUNX2 chr15 + 71088961 71088975 1.9e-05 0.24 aaagccacacaccta
M2310_1.02 RUNX2 chr19 + 45511446 45511460 1.99e-05 0.24 aaagCCACACAACAA
M2310_1.02 RUNX2 chr18 + 48873526 48873540 2.1e-05 0.24 caCACCACACGTCCC
M2310_1.02 RUNX2 chr6 - 167829778 167829792 2.11e-05 0.24 GAAACCACAAAATTA
M2310_1.02 RUNX2 chr5 - 88243806 88243820 2.17e-05 0.24 AAAACCACAGTGAGA
M2310_1.02 RUNX2 chr1 + 210236752 210236766 2.19e-05 0.24 GAAACCACAGAATGA
M2310_1.02 RUNX2 chr1 - 120197501 120197515 2.49e-05 0.24 TCCACCACAGGCCCC
M2310_1.02 RUNX2 chr12 + 124922900 124922914 2.52e-05 0.24 ACCACCACAACAACA
M2310_1.02 RUNX2 chr6 + 30488957 30488971 2.55e-05 0.24 caatccacagaaaca
M2310_1.02 RUNX2 chr10 - 35406021 35406035 2.76e-05 0.24 CAAACCCCAGCCACA
M2310_1.02 RUNX2 chr19 - 55063309 55063323 2.83e-05 0.24 CAAACCATAGGCCCC
M2310_1.02 RUNX2 chr18 - 363516 363530 2.86e-05 0.24 AAAACCACATGAAAA
M2310_1.02 RUNX2 chr6 + 31652306 31652320 2.94e-05 0.24 TAACCCACAGCCAAa
M2310_1.02 RUNX2 chr1 + 8626537 8626551 3.04e-05 0.24 taaaccacaaatgac
M2310_1.02 RUNX2 chr17 - 17837897 17837911 3.16e-05 0.24 TAGGCCACAGAACCA
M2310_1.02 RUNX2 chr6 - 20721133 20721147 3.28e-05 0.24 AACACCACACACCGG
M2310_1.02 RUNX2 chr12 - 26057299 26057313 3.28e-05 0.24 AACACCACACACCGG
M2310_1.02 RUNX2 chr5 - 101067474 101067488 3.42e-05 0.24 GTAACCACAGAACTG
M2310_1.02 RUNX2 chr1 - 162082110 162082124 3.43e-05 0.24 AACACCACACACTGC
M2310_1.02 RUNX2 chr1 + 223828450 223828464 3.52e-05 0.24 ATAACCACATACCAT
M2310_1.02 RUNX2 chr6 + 28597524 28597538 3.56e-05 0.24 ACAACCACACCCAGA
M2310_1.02 RUNX2 chr16 - 85548673 85548687 3.59e-05 0.24 TTCACCACAGCCAAA
M2310_1.02 RUNX2 chr1 + 11180044 11180058 3.61e-05 0.24 gagaccacaagcgca
M2310_1.02 RUNX2 chr5 - 10596233 10596247 3.66e-05 0.24 CAAACCACAATGGGC
M2310_1.02 RUNX2 chr1 - 24742497 24742511 3.7e-05 0.24 CTAACCACATAGCAG
M2310_1.02 RUNX2 chr17 + 2653173 2653187 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr6 + 3613855 3613869 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr4 + 4257968 4257982 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr10 + 15583266 15583280 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr1 + 21094524 21094538 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr18 + 22622102 22622116 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr8 + 27813221 27813235 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr10 + 29614564 29614578 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr6 + 43883343 43883357 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr12 + 54639388 54639402 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr17 + 68758115 68758129 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr6 + 100224194 100224208 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr2 + 121640123 121640137 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr7 + 140529696 140529710 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr3 + 169544773 169544787 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr2 + 203536828 203536842 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr1 + 226432217 226432231 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr1 + 231948358 231948372 3.8e-05 0.24 aaaaccaaacaccac
M2310_1.02 RUNX2 chr12 - 1733851 1733865 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr6 - 20721205 20721219 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr10 - 22508300 22508314 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr22 - 25572101 25572115 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr12 - 26057371 26057385 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr19 - 30290933 30290947 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr6 - 34329893 34329907 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr19 - 37076617 37076631 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr17 - 39346936 39346950 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr19 - 40547273 40547287 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr12 - 101560065 101560079 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr6 - 109461199 109461213 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr6 - 111062976 111062990 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr1 - 113077979 113077993 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chr1 - 231729085 231729099 3.8e-05 0.24 AAAACCAAACACCAC
M2310_1.02 RUNX2 chrX - 12240647 12240661 4.15e-05 0.258 AAAACCAAAAAACAA
M2310_1.02 RUNX2 chr19 + 34218473 34218487 4.22e-05 0.258 CAAACCTCAGCAAAC
M2310_1.02 RUNX2 chr21 + 35586079 35586093 4.22e-05 0.258 CTAACCACAAGTGCA
M2310_1.02 RUNX2 chr11 - 32015560 32015574 4.3e-05 0.259 AAAACCACAACGTAT
M2310_1.02 RUNX2 chr5 - 36929212 36929226 4.54e-05 0.259 GAAACCACAATGATA
M2310_1.02 RUNX2 chr19 + 4791029 4791043 4.67e-05 0.259 aaaaccaaaaccaaa
M2310_1.02 RUNX2 chr19 - 43227330 43227344 4.79e-05 0.259 CAAACCACTGTCACA
M2310_1.02 RUNX2 chr19 - 43289202 43289216 4.79e-05 0.259 CAAACCACTGTCACA
M2310_1.02 RUNX2 chr8 - 8299810 8299824 4.83e-05 0.259 GAAACCAAAAAAACC
M2310_1.02 RUNX2 chr6 - 28939773 28939787 4.83e-05 0.259 CTCACCACAACCTCT
M2310_1.02 RUNX2 chr17 - 8682682 8682696 4.9e-05 0.259 CAAACCAAACACCGC
M2310_1.02 RUNX2 chr16 + 323771 323785 4.94e-05 0.259 tccaccacacacaca
M2310_1.02 RUNX2 chr5 - 14147454 14147468 4.94e-05 0.259 TCCACCACACACACA
M2310_1.02 RUNX2 chrX + 12240424 12240438 5.01e-05 0.259 GAGACCACAGATATA
M2310_1.02 RUNX2 chr19 + 17334051 17334065 5.22e-05 0.259 AAaaccacaatcgat
M2310_1.02 RUNX2 chr17 - 37567368 37567382 5.22e-05 0.259 AAAGCCACATAAAAA
M2310_1.02 RUNX2 chr19 + 39834151 39834165 5.23e-05 0.259 GCGACCACAACAAAC
M2310_1.02 RUNX2 chr8 + 37163970 37163984 5.3e-05 0.259 gacaccacagcagca
M2310_1.02 RUNX2 chr19 + 40091990 40092004 5.42e-05 0.259 aaaaccaaacaccaa
M2310_1.02 RUNX2 chr6 + 134109418 134109432 5.46e-05 0.259 caagccacactccag
M2310_1.02 RUNX2 chr17 + 58387947 58387961 5.56e-05 0.259 CCAACCACAGGTGCA
M2310_1.02 RUNX2 chr1 - 221591266 221591280 5.68e-05 0.259 CTGGCCACAACACAA
M2310_1.02 RUNX2 chr15 + 59786291 59786305 5.85e-05 0.259 caacccacagagtga
M2310_1.02 RUNX2 chr10 - 88101760 88101774 5.92e-05 0.259 GACACCACAGATATA
M2310_1.02 RUNX2 chr12 + 121531735 121531749 6.06e-05 0.259 acacccacaccccac
M2310_1.02 RUNX2 chr5 + 181188484 181188498 6.16e-05 0.259 aaacCCACACCTACC
M2310_1.02 RUNX2 chr9 - 129439483 129439497 6.23e-05 0.259 ATAACCACATACAGG
M2310_1.02 RUNX2 chr19 - 17538931 17538945 6.26e-05 0.259 GCAGCCACAGCCCCG
M2310_1.02 RUNX2 chr15 - 66162575 66162589 6.43e-05 0.259 ATCACCACAGATTAC
M2310_1.02 RUNX2 chr12 + 124922897 124922911 6.48e-05 0.259 AAAACCACCACAACA
M2310_1.02 RUNX2 chr2 + 233251319 233251333 6.59e-05 0.259 acagccacagagcta
M2310_1.02 RUNX2 chr6 - 20617677 20617691 6.59e-05 0.259 ACTACCACAAAGACA
M2310_1.02 RUNX2 chr16 - 46927 46941 6.68e-05 0.259 CAAACCCCAAATCAC
M2310_1.02 RUNX2 chr6 - 167829787 167829801 6.68e-05 0.259 CTAAACACAGAAACC
M2310_1.02 RUNX2 chr1 + 233244684 233244698 6.88e-05 0.259 taggccacagagcaa
M2310_1.02 RUNX2 chr19 - 40056290 40056304 6.88e-05 0.259 CAGACCATAGACCAA
M2310_1.02 RUNX2 chr16 + 323734 323748 6.99e-05 0.259 cacaccactgactcc
M2310_1.02 RUNX2 chr5 + 96781324 96781338 7.05e-05 0.259 GTAACCACAATCCTG
M2310_1.02 RUNX2 chr19 + 40567119 40567133 7.08e-05 0.259 aaaaccaaaagcaaa
M2310_1.02 RUNX2 chr19 - 34275755 34275769 7.08e-05 0.259 ATTACCACACAACCA
M2310_1.02 RUNX2 chr17 + 35703582 35703596 7.23e-05 0.259 aaaaccaaataccac
M2310_1.02 RUNX2 chr6 + 47089749 47089763 7.23e-05 0.259 aaaaccaaacacctc
M2310_1.02 RUNX2 chr1 + 162018034 162018048 7.23e-05 0.259 aaaaccaaataccac
M2310_1.02 RUNX2 chr8 - 31054965 31054979 7.23e-05 0.259 AAAACCAAATACCAC
M2310_1.02 RUNX2 chr12 - 105104870 105104884 7.23e-05 0.259 AAAACCAAATACCAC
M2310_1.02 RUNX2 chr3 - 156914407 156914421 7.23e-05 0.259 AAAACCAAACACCTC
M2310_1.02 RUNX2 chr14 + 34461104 34461118 7.37e-05 0.259 TAAACCACACTGAAA
M2310_1.02 RUNX2 chr10 + 16686132 16686146 7.4e-05 0.259 AACCCCACAAAACCT
M2310_1.02 RUNX2 chr16 + 52553576 52553590 7.4e-05 0.259 CAACCCACACATCTA
M2310_1.02 RUNX2 chr20 - 64030735 64030749 7.47e-05 0.259 AAGAGCACAAACCCA
M2310_1.02 RUNX2 chr19 - 29915965 29915979 7.62e-05 0.259 AAAACCAGACACCAC
M2310_1.02 RUNX2 chr19 - 40829283 40829297 7.62e-05 0.259 AAAACCAGACACCAC
M2310_1.02 RUNX2 chr14 + 75644352 75644366 7.78e-05 0.259 TATACCACAACCTCA
M2310_1.02 RUNX2 chr2 - 212178038 212178052 7.85e-05 0.259 TTAGCCACAGACCAT
M2310_1.02 RUNX2 chr12 + 1317307 1317321 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr6 + 7031235 7031249 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chrX + 13679962 13679976 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr5 + 38516960 38516974 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr6 + 47275407 47275421 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr10 + 50569051 50569065 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr5 + 67837483 67837497 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr15 + 82534766 82534780 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr10 + 88663421 88663435 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr7 + 95009054 95009068 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr7 + 96662422 96662436 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr7 + 105303217 105303231 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr6 + 143448154 143448168 7.88e-05 0.259 aaaaccaaacaccgc
M2310_1.02 RUNX2 chr5 - 17375986 17376000 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr9 - 19265697 19265711 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr6 - 20617661 20617675 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr19 - 30398633 30398647 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr6 - 47745367 47745381 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr5 - 55990983 55990997 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr6 - 56562832 56562846 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr10 - 61977103 61977117 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr1 - 78021226 78021240 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr5 - 78046947 78046961 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr6 - 79361184 79361198 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr5 - 81714151 81714165 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr7 - 121290050 121290064 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr1 - 236186581 236186595 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr1 - 237152098 237152112 7.88e-05 0.259 AAAACCAAACACCGC
M2310_1.02 RUNX2 chr1 + 78021138 78021152 7.94e-05 0.259 caacccacaacaggc
M2310_1.02 RUNX2 chr6 + 79361096 79361110 7.94e-05 0.259 caacccacaacaggc
M2310_1.02 RUNX2 chr19 - 34474557 34474571 8.04e-05 0.26 ACCACCACACCCAGC
M2310_1.02 RUNX2 chr19 - 39414605 39414619 8.11e-05 0.26 CTTCCCACAGCCACC
M2310_1.02 RUNX2 chr9 - 129439641 129439655 8.11e-05 0.26 CTTCCCACAGCCACC
M2310_1.02 RUNX2 chr6 - 107492546 107492560 8.21e-05 0.261 CAAACCACGGACTGC
M2310_1.02 RUNX2 chr7 - 133492281 133492295 8.25e-05 0.261 AACACCACACAGAAT
M2310_1.02 RUNX2 chr1 - 244719952 244719966 8.45e-05 0.266 GCAACCACAGACTGG
M2310_1.02 RUNX2 chr16 - 22728607 22728621 8.56e-05 0.268 CAAGCCACATGCACT
M2310_1.02 RUNX2 chr1 - 1011545 1011559 8.62e-05 0.269 AGAGCCACAAGCCCC
M2310_1.02 RUNX2 chr12 + 131477389 131477403 8.66e-05 0.269 gaaaccacaccgctg
M2310_1.02 RUNX2 chr1 - 78021392 78021406 8.84e-05 0.27 CTGGCCACACCACCA
M2310_1.02 RUNX2 chr18 - 70319414 70319428 8.91e-05 0.27 CAGACCAGAGCCACA
M2310_1.02 RUNX2 chr15 - 77067250 77067264 8.95e-05 0.27 CAAACCAAAAGCAGA
M2310_1.02 RUNX2 chr19 - 34270433 34270447 9.02e-05 0.27 GAGGCCACAGGGCCA
M2310_1.02 RUNX2 chr5 + 181174606 181174620 9.06e-05 0.27 cacaccaccacgccc
M2310_1.02 RUNX2 chr19 - 34429692 34429706 9.06e-05 0.27 CACACCACCACGCCC
M2310_1.02 RUNX2 chr9 - 95508085 95508099 9.06e-05 0.27 CCCGCCACACACAAA
M2310_1.02 RUNX2 chr9 - 123260619 123260633 9.1e-05 0.27 GTAACCACAACATTA
M2310_1.02 RUNX2 chr19 - 55063263 55063277 9.13e-05 0.27 GAAACCACCAATCCC
M2310_1.02 RUNX2 chr5 + 32188029 32188043 9.25e-05 0.272 ataaccacatggaaa
M2310_1.02 RUNX2 chr5 - 175779382 175779396 9.64e-05 0.281 CAACCCACACAGCTG
M2310_1.02 RUNX2 chr7 - 1460896 1460910 9.72e-05 0.281 CCAGCCACATTCCCA
M2310_1.02 RUNX2 chr6 + 133248822 133248836 9.76e-05 0.281 CAAACCTCAATAAAC
M2310_1.02 RUNX2 chr1 - 37988848 37988862 9.76e-05 0.281 CACACAACACACCCC
M2310_1.02 RUNX2 chr19 + 45437611 45437625 9.83e-05 0.281 aacaccacatgatcc
M2310_1.02 RUNX2 chr10 - 35406365 35406379 9.87e-05 0.281 AAGGCCACAGGGTCC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_34 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background --motif M2310_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_34 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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