******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr9:95721070-95721570 1.0000 100 chr3:42819931-42820431 1.0000 100 chr1:220118997-220119497 1.0000 100 chrX:48958117-48958617 1.0000 100 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100 chr1:28088353-28088853 1.0000 100 chr1:150321317-150321817 1.0000 100 chr19:39445317-39445817 1.0000 100 chr6:27495576-27496076 1.0000 100 chr10:75379137-75379637 1.0000 100 chr19:44164671-44165171 1.0000 100 chr6:127343088-127343588 1.0000 100 chr16:690202-690702 1.0000 100 chr1:163321558-163322058 1.0000 100 chr11:2400275-2400775 1.0000 100 chr14:20461431-20461931 1.0000 100 chr1:40257882-40258382 1.0000 100 chr21:46286062-46286562 1.0000 100 chr16:71808709-71809209 1.0000 100 chr14:21511156-21511656 1.0000 100 chr1:1375104-1375604 1.0000 100 chr3:17730375-17730875 1.0000 100 chr6:90587028-90587528 1.0000 100 chr8:37302631-37303131 1.0000 100 chr1:80403305-80403805 1.0000 100 chr11:93783967-93784467 1.0000 100 chr16:84186779-84187279 1.0000 100 chr5:150449660-150450160 1.0000 100 chr2:201071700-201072200 1.0000 100 chr3:9952344-9952844 1.0000 100 chr3:15098912-15099412 1.0000 100 chr11:61792430-61792930 1.0000 100 chr7:108569513-108570013 1.0000 100 chr16:2047673-2048173 1.0000 100 chr18:49460605-49461105 1.0000 100 chr7:130440790-130441290 1.0000 100 chr5:173144665-173145165 1.0000 100 chr11:118251992-11825249 1.0000 100 chr1:169367868-169368368 1.0000 100 chr17:59707369-59707869 1.0000 100 chr6:36874590-36875090 1.0000 100 chr12:53501261-53501761 1.0000 100 chr19:35248559-35249059 1.0000 100 chr12:51172704-51173204 1.0000 100 chr16:1420557-1421057 1.0000 100 chr2:24076212-24076712 1.0000 100 chr1:230978766-230979266 1.0000 100 chr6:82260138-82260638 1.0000 100 chr16:30571838-30572338 1.0000 100 chr12:806374-806874 1.0000 100 chr1:224330205-224330705 1.0000 100 chr3:48439898-48440398 1.0000 100 chr16:2682197-2682697 1.0000 100 chr1:20732198-20732698 1.0000 100 chr19:17932753-17933253 1.0000 100 chr14:44961891-44962391 1.0000 100 chr17:57849799-57850299 1.0000 100 chr1:167936275-167936775 1.0000 100 chr19:12681637-12682137 1.0000 100 chr5:81301369-81301869 1.0000 100 chr1:43389617-43390117 1.0000 100 chr1:100132760-100133260 1.0000 100 chr5:159263006-159263506 1.0000 100 chr12:38316440-38316940 1.0000 100 chr12:6663085-6663585 1.0000 100 chr12:34022154-34022654 1.0000 100 chr19:36666555-36667055 1.0000 100 chr7:5822859-5823359 1.0000 100 chr3:14651489-14651989 1.0000 100 chr19:39435664-39436164 1.0000 100 chr5:149345136-149345636 1.0000 100 chr1:154182976-154183476 1.0000 100 chr14:90383121-90383621 1.0000 100 chr19:43950898-43951398 1.0000 100 chr5:37371026-37371526 1.0000 100 chr1:156740987-156741487 1.0000 100 chr15:55196721-55197221 1.0000 100 chr7:102748618-102749118 1.0000 100 chr19:44259548-44260048 1.0000 100 chr1:150293606-150294106 1.0000 100 chr8:143281438-143281938 1.0000 100 chr12:48105899-48106399 1.0000 100 chr12:49567884-49568384 1.0000 100 chr7:93232066-93232566 1.0000 100 chr19:38849854-38850354 1.0000 100 chr17:42154862-42155362 1.0000 100 chr1:155934240-155934740 1.0000 100 chr16:30650436-30650936 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.227 C 0.273 G 0.273 T 0.227 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF580.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/background): A 0.224 C 0.276 G 0.276 T 0.224 ******************************************************************************** ******************************************************************************** MOTIF BBRCTTCCGGTYBBB MEME-1 width = 15 sites = 188 llr = 1830 E-value = 1.0e-166 ******************************************************************************** -------------------------------------------------------------------------------- Motif BBRCTTCCGGTYBBB MEME-1 Description -------------------------------------------------------------------------------- Simplified A 115::::::::1111 pos.-specific C 44:8::aa::13342 probability G 2231::::aa22334 matrix T 3222aa::::74333 bits 2.2 * 1.9 **** 1.7 ***** 1.5 ****** Relative 1.3 ****** Entropy 1.1 ****** (14.0 bits) 0.9 ******** 0.6 ******** 0.4 ********* 0.2 ************ 0.0 --------------- Multilevel CCACTTCCGGTTCCG consensus TTG GCTGT sequence GG GTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BBRCTTCCGGTYBBB MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr5:159263006-159263506 + 45 1.17e-08 TTCAAACCAC CCACTTCCGGTTTTT CAGCCGGTTC chr1:28088353-28088853 - 82 4.07e-08 CCGC TTACTTCCGGTTCCT AGCGATGCGC chr6:28136607-28137107 - 25 4.07e-08 CGACCTCTAG CCACTTCCGGTTGCT AACGGTTCCC chr17:50372899-50373399 + 84 4.07e-08 TTTCGATCAC TCACTTCCGGTCTCG AA chr19:16197635-16198135 - 69 4.07e-08 CAGCTCACCT CCACTTCCGGTTCGG GGAGCCGCGC chr14:74881627-74882127 + 64 7.81e-08 GCGGCCCGCC CCACTTCCGGTTGTT GTCCGGCCCT chr15:89893816-89894316 + 1 1.24e-07 . TCACTTCCGGTTGGT GCGCTGCTGA chr17:30906030-30906530 + 5 1.24e-07 CCAT TGACTTCCGGTTCCT GCGTGCTGCG chr19:47256203-47256703 - 73 1.24e-07 ATAAAGAGGG TCACTTCCGGTCCTG TGGGACCGTT chr1:43389617-43390117 + 57 1.69e-07 GCCCTCCCAC CAACTTCCGGTTCCT GCTGGGTGCC chr17:57849799-57850299 - 48 1.69e-07 CCTGGAGCAG CCGCTTCCGGTTCCG GTAGCAGCTA chr17:59707369-59707869 - 63 1.69e-07 CCCGCTCACG TCACTTCCGGTCCGG TCCCTCTGCC chr1:20507949-20508449 - 25 1.69e-07 ACCCCTTGCC CCGCTTCCGGTTCCG GCGTCGTGCG chr11:64317420-64317920 - 5 1.69e-07 AGCAAGTTCG CCACTTCCGGTTCTC CTGG chr15:65517429-65517929 + 53 2.20e-07 GGAGGCTTTA GCACTTCCGGTTCGT TGCGATCCGC chr8:142717957-142718457 - 62 3.03e-07 TCCTTTCAGT TTGCTTCCGGTTTCT TTCCCAGGCT chr2:232550398-232550898 - 38 3.03e-07 TTGGGCCCGG GTACTTCCGGTTTTG CGCGGGGCGC chr3:14651489-14651989 + 61 4.04e-07 GCTGTCGAAG ACACTTCCGGTTGCG ACGGAGGTAG chr16:77190860-77191360 - 63 4.04e-07 CTCCCAGAAG ACACTTCCGGTTGCG GAGCTTTATT chr9:85940763-85941263 + 31 4.04e-07 TGAAAAAAGA TAACTTCCGGTCTCG CGATCGTCTC chr11:118359313-11835981 + 72 4.04e-07 GTTGATGACG TAACTTCCGGTTGCT GTGCTGAGTC chrX:48958117-48958617 + 66 4.04e-07 CCCTGTAGCG TCACTTCCGGTCCCA CCCACCTACA chr8:143281438-143281938 - 55 5.13e-07 TCTTTCCGGT TTGCTTCCGGTTTTT TCCTCAGGCT chr4:152779737-152780237 + 6 5.13e-07 CAACG CTACTTCCGGTCTCC TCACTTCCGG chr15:90265356-90265856 + 85 5.13e-07 CCCGCCCCTT CCACTTCCGGTCTTA C chr19:12681637-12682137 - 56 6.58e-07 CGTGATAAAC CAACTTCCGGTCTTT CGCCCAAAGC chr19:49580397-49580897 - 22 6.58e-07 AGGGGCAGCT CTACTTCCGGTGCCT TCTGCTGGGC chr1:43172076-43172576 + 52 6.58e-07 GCGGCAAACC ATACTTCCGGTTTGT CGTTGCTATA chr12:49567884-49568384 + 80 8.37e-07 GGGCTGGCAA TCTCTTCCGGTTCGT CTTGGC chr19:8832101-8832601 + 15 8.37e-07 CCCCGCGCTT CCGCTTCCGGTCTGG GGAGAGGTGC chr6:36874590-36875090 + 60 1.04e-06 TCGCTGCTGC ACACTTCCGGTCCGT TCAACCCTTT chr21:46286062-46286562 + 13 1.04e-06 CGCCGCGGAC CGACTTCCGGTTCGC TCAGCACTAC chr3:15098912-15099412 - 60 1.28e-06 TCTACCAGCT TGTCTTCCGGTTTCG TCGCCGCCGC chr19:11435313-11435813 - 84 1.28e-06 CG TCACTTCCGGTCGTA CGTTCCGCAC chr6:57317393-57317893 + 23 1.28e-06 CTAGTCACTT CCTCTTCCGGTTTCA TATGAACTCT chr5:110738752-110739252 + 40 1.56e-06 GTTTCCAACG TGACTTCCGGTTGTC AGAATTTACC chr5:83077349-83077849 - 40 1.56e-06 CTCCGTGACT CTACTTCCGGTATCT TCCAAAACGC chr16:74296589-74297089 - 18 1.56e-06 CCCAGTTCCT CTTCTTCCGGTTCGT CAGCCCTCGC chr1:1615150-1615650 + 63 1.56e-06 CCCGCGTGAC GCACTTCCGGTGCTT GCCCTGCCCA chr14:67359649-67360149 + 9 1.90e-06 TTTCACTT CCGCTTCCGGTTGTC ACAGGCGACG chr1:44213173-44213673 - 41 1.90e-06 GCCGACAGAA ACACTTCCGGTCGGT GTTGTAGGAA chr3:9749729-9750229 + 15 1.90e-06 TGGTTGAGCC CTACTTCCGGTGGTG CTGTGGTCTG chr12:110450055-11045055 + 58 2.29e-06 GTACAGCGGA GCGCTTCCGGTCTGG CAGCCTGGGC chr19:5720087-5720587 + 22 2.29e-06 ATCGTCTCCG CCTCTTCCGGTCTCC CACTTTATGC chr1:155934240-155934740 + 16 2.71e-06 TTACGCACAG CCTCTTCCGGTCGTG GGGCCGAGCG chr14:21511156-21511656 + 14 2.71e-06 GACAGAAAAG TCATTTCCGGTGTCG CGCTTTCTTG chr7:99919315-99919815 - 78 2.71e-06 ATACCCAG CAGCTTCCGGTCTTG CGCGCTCAGG chr5:142024654-142025154 + 33 2.71e-06 AAAAAAAAGT GAACTTCCGGTTTGC TTGCAAGAGA chr12:51172704-51173204 + 15 3.19e-06 AGTCCCACGA TCACTTCCGGTCACC CCTTCTCAAC chr20:46364169-46364669 - 32 3.19e-06 ATCCGGCCTC GCACTTCCGGTGGGG AGATTCCGGC chr11:45917639-45918139 + 49 3.75e-06 GCCCTCCTTC CTGCTTCCGGTCTTA GGCCCGCCTC chr9:111630923-111631423 - 82 3.75e-06 TAGG CTGCTTCCGGTGTGT CACTGAACAC chr20:31738964-31739464 + 11 3.75e-06 TACCTCCTTC TGACTTCCGGTATTG CTGCGGTCTG chr2:100178086-100178586 - 69 3.75e-06 GAGGGGGCAG TAACTTCCGGGTTGT TGCCATGGAA chr1:100132760-100133260 + 34 4.37e-06 CCACCATCGG ATTCTTCCGGTTCTG CGGAGGATAA chr2:24076212-24076712 + 64 4.37e-06 AGAGTCCAAG ACACTTCCGGGCTCT GTACCGTAAA chrX:47836611-47837111 - 84 4.37e-06 AG CCGCTTCCGGTCACT ACCCCTAGCA chr2:55269025-55269525 + 45 4.37e-06 GGTCCCCGCC GGGCTTCCGGTCCCG CTGGAAAAGG chr19:36772817-36773317 + 71 4.37e-06 ACAGGAAAAC GTGCTTCCGGTTCTC GGCGGAAGTA chr19:43950898-43951398 + 80 5.02e-06 GGGGTTGCGG GCACTTCCGGTCAGG CAGGCG chr5:81301369-81301869 + 23 5.02e-06 CGGGCACTAT GTGCTTCCGGTCTCC AATACCGCAG chr16:84186779-84187279 + 61 5.02e-06 AGCTACCCAC GGTCTTCCGGTTTGG ACCGGAAGTG chr6:27693785-27694285 - 35 5.02e-06 TCCCCTGGCG TCATTTCCGGGTCCG CTCTGGAAAC chr12:57745062-57745562 + 18 5.02e-06 AATCTCTAGG GTACTTCCGGTGGGG AGAGGGGTGT chr8:33484925-33485425 - 47 5.02e-06 GCTCAGCGTG CAACTTCCGGTCGGA TCGCGGGCGC chr17:4940242-4940742 - 42 5.02e-06 TTGAGATGAA GGACTTCCGGTCCTA AAAGGCCGGT chr19:3761735-3762235 - 51 5.02e-06 GGTCTCCACG ACGCTTCCGGTGCCT CAAGGTCCCA chr17:39199800-39200300 + 31 5.02e-06 GCAATCCAGC TGACTTCCGGTTACA GATAACCACG chr19:39435664-39436164 - 71 5.78e-06 CCCTAGCTTT CCTTTTCCGGTTGCG GCGCCGCGCG chr14:21383838-21384338 + 18 5.78e-06 GATGCCCTTT CCGCTTCCGGGTCCC AACAGCgtta chr6:7389575-7390075 + 33 5.78e-06 AGGCGGTGAG GGGCTTCCGGTTGGG GTGGCAGGGT chr19:50376126-50376626 - 84 5.78e-06 AC GAACTTCCGGTCCGC TTAGGACCAG chr7:92245698-92246198 + 21 5.78e-06 GGCTATGAAA TCGCTTCCGGGTTCA CACCCTTTGC chr11:18526680-18527180 + 84 5.78e-06 TTCCACTACG TCACTTCCGGGCCGC CG chr13:52194233-52194733 + 22 5.78e-06 GCGCTCTCCT CCGTTTCCGGTCTGG CTTGTTCCCC chrX:153928079-153928579 - 62 5.78e-06 CTGGCGGCAG TGTCTTCCGGTTCGC AAGCCCGCGG chr5:149345136-149345636 - 71 6.63e-06 CAGGAACGCT ATGCTTCCGGTTGCC CGATGGGCCG chr19:49451588-49452088 + 33 6.63e-06 AAACGAAGCC ACACTTCCGGTCTAT CGGTAAACAC chr1:150293606-150294106 + 41 7.49e-06 TCCGTAATTT CCGCTTCCGGTAGTG AGAACCCTTC chr12:76348204-76348704 - 49 7.49e-06 CTTCGACTCC TGGCTTCCGGGTTTT CTCCCCGCCT chr3:119498180-119498680 + 42 7.49e-06 GGCAGCCAAC TCACTTCCGGGGGTG CACTCAGCAC chr10:18659024-18659524 - 2 7.49e-06 TTCTTCGGTT TCACTTCCGGTAGGA G chr15:55196721-55197221 - 31 8.49e-06 GGGAAGAAGG TAACTTCCGGTGACG GGGTTGCATC chr19:38374290-38374790 + 61 8.49e-06 GGGCAAAAGC CAACTTCCGGTCACC ATCTTGAGTG chr12:6493133-6493633 + 24 8.49e-06 TCCCGCCTCA GTGCTTCCGGTCCGC CTGCCGGAAG chr11:62621943-62622443 + 19 8.49e-06 CTTGTAGACT TGATTTCCGGTCCCA CCGCCAGGTT chr12:48105899-48106399 - 18 9.58e-06 CCACCTAGCG ACTCTTCCGGTGCTG TGAAGGCGGT chr16:1420557-1421057 - 27 9.58e-06 GTATGGCGCC CGGTTTCCGGTTTCC GGCGACGGAA chr10:97401107-97401607 + 38 9.58e-06 TCTTCTGGCG TCACTTCCGGATTCG TGTGCATTAC chr5:121961599-121962099 + 57 9.58e-06 TTGTTCTGTC TCAGTTCCGGTTTTC CCTTCCAAGC chr15:75335800-75336300 - 46 9.58e-06 CCGGGAATTT CTTTTTCCGGTCCCG CAGGGTCAGC chr15:74099992-74100492 + 46 9.58e-06 CCGGGAATTT CTTTTTCCGGTCCCG CCAGGTCAGC chr19:36666555-36667055 - 70 1.07e-05 CTGTCCACAG CTACTTCCGGTAGGA GCCTCGCAGG chr1:230978766-230979266 + 69 1.07e-05 GCGCGGCGCA AGTCTTCCGGTCTGG CGTCTGACGT chr7:44200680-44201180 - 85 1.07e-05 T CCACTTCCGGATCCG GTCAGCCTGG chr7:108569513-108570013 - 43 1.20e-05 GGGCTGTGCG CCACTTCCGGCTTCA ACCCCCGAAA chr3:180601881-180602381 + 31 1.20e-05 CGACCCCAGA ACACTTCCGGGTGTA ACTGGTTGTG chr22:37686128-37686628 - 17 1.20e-05 CTCCCTGAAG ACACTTCCGGGTGTA GCGTACTCAT chr7:5822859-5823359 - 44 1.34e-05 CCACGACGCC ATGCTTCCGGTTAGG CTACCCTGCA chr1:150321317-150321817 + 19 1.34e-05 GGCGGTCAGA AGGTTTCCGGTTCCG GTGTAACGTT chr15:40382678-40383178 - 45 1.34e-05 TTTCAAATAG AAACTTCCGGTAGCT AGGCGGAAGT chr7:139340030-139340530 - 49 1.34e-05 AGCAGCCGGA CCTTTTCCGGTGTTG CGAATTTCCA chr16:89657416-89657916 + 76 1.34e-05 CACCCGGCGG GGACTTCCGGGGTCG CCGCCCCACT chr1:150926120-150926620 + 31 1.34e-05 CACTAAAGGT TTGCTTCCGGGCGTT TCTTTTGctt chr17:42773190-42773690 + 58 1.49e-05 CCTTAGCCGG TAGCTTCCGGGTTTC CTGGGCTACT chr21:25734806-25735306 + 69 1.49e-05 TGGAGGGTAA GTGCTTCCGGGTCCC CTGGCACAGC chr19:4723723-4724223 + 38 1.49e-05 CCATGAACGA CATCTTCCGGTGGGT TAGGGAGAGA chr3:129160952-129161452 - 75 1.49e-05 GTACTCTCAT TCACTTCCTGTCCCT TTCTTTTACG chrX:71366023-71366523 + 79 1.49e-05 GACTGTTGTT TTATTTCCGGTCTAT GGGACCC chr12:119667676-11966817 - 75 1.65e-05 CACCCCTCAG CGACTTCCGCTTCCG GCGACTCCGT chr3:183884631-183885131 + 69 1.65e-05 AGCTGCGCAA CTACTTCCGGGGCGA AGGCAACACC chr5:133051421-133051921 - 31 1.65e-05 AACATCAAAG AAACTTCCGGTAGTG GGGTGTCTTG chr19:43827126-43827626 + 81 1.83e-05 GTCTCTGGGT CCTTTTCCGGTGTCC TTAAG chr17:1463107-1463607 + 48 2.02e-05 cttggttctg tggtttccggtgtgg gttccggtgt chr7:103297173-103297673 - 40 2.02e-05 GATGAAGGAT GTGCTTCCGGGGTCG CGACCTGAGG chr17:7572180-7572680 - 62 2.02e-05 CAGCCTCCAG AGGCTTCCGGGCTCT GGGGGTTATC chr16:807577-808077 + 30 2.02e-05 CCTTGGGAGA TAATTTCCGGGTCCC GGCAGGAAAG chr19:44071882-44072382 + 47 2.22e-05 CGGGGTAGGG GCACTTCCGCTCCCG GGGGGCGAGG chr8:74350128-74350628 - 47 2.22e-05 GCCCCGCAAG GCGTTTCCGGGTTTT GAGGGGTACC chr7:1504132-1504632 - 84 2.22e-05 TT TTCCTTCCGGTTGTT CCGGAAGTCG chr3:14178550-14179050 + 19 2.44e-05 AGGTTTCTCT CTATTTCCGGTGTAT TGTATCCTCA chr8:27311314-27311814 + 65 2.44e-05 TACTGGAAAC CTACTTCCGGCTGCA AATGGGAAAA chr1:200620580-200621080 - 36 2.44e-05 CCAACCACCG GCACTTCCGGGGGGC GGGTGGAAGC chr12:28190237-28190737 + 5 2.44e-05 AAAT CAACTTCCGGGGGCA GAGGTGTTCG chr16:2682197-2682697 - 8 2.68e-05 GCGGTAGGCG GAAGTTCCGGTCCCG AAAAGCA chr11:93783967-93784467 - 35 2.68e-05 AGGGTGGGGT AAACTTCCGGGCCTA TAAGAGGCGT chr1:1375104-1375604 + 24 2.68e-05 CGAAAGGCGA CGGTTTCCGGTTAGT GGAATCACGG chr12:122266259-12226675 - 64 2.68e-05 CAGCAGATTC CGGTTTCCGGGTTGG CGTGCGCTGC chr1:234373224-234373724 - 8 2.68e-05 TAGAGGGGCG GGACTTCCTGTTTCG CTTTTAT chr1:33127058-33127558 + 34 2.68e-05 TTGAAGCCAC GGTCTTCCGGTAGCG TAAAGTCACT chr17:18087671-18088171 + 58 2.68e-05 CTGTTCTCTT TGGCTTCCGGGCGCA CGCTACTCTG chr13:45464572-45465072 - 50 2.68e-05 ATGGGTACGA CTATTTCCGGTTGAA ACGTAGAAGG chr7:44044350-44044850 + 62 2.68e-05 CTGGCCCCTA CCATTTCCGCTTCCT GCCGTGGGGC chr16:30650436-30650936 - 21 2.94e-05 CGCCGGTCCC CGTCTTCCGGGGTGG TGAGAAACTA chr19:58519640-58520140 + 41 3.21e-05 AGGCCGAAGC ACGTTTCCGGTATTT TTATGGCGAT chr19:1383558-1384058 + 61 3.21e-05 CTCCCGGCTC CAGGTTCCGGTTTCC GCATGCGCTC chr11:64269821-64270321 - 34 3.21e-05 TGACCCAGAT TCCCTTCCGGTGCGT GTGAAGCCAC chr11:66002007-66002507 + 37 3.21e-05 CCTAAGTCCT TGAGTTCCGGGTCCG GGCAGCAGAG chr11:2400275-2400775 + 67 3.51e-05 ACAAATGCCG TCGTTTCCGGGGCTG CTTCCGAGCC chr19:14571811-14572311 + 70 3.51e-05 CAGTCAGACA CAGCTTCCGGGTCAT TTAGGCAGCT chr1:173714620-173715120 + 30 3.51e-05 AAGGGCACGA CTACTTCCGGAGCCG CACCGGAACC chr1:156740987-156741487 - 68 3.83e-05 TGCTTCATGG TGTGTTCCGGTTTCC TTGATTTCCT chr5:176448120-176448620 - 6 3.83e-05 TCAGCCACAA CCACATCCGGTCTGA ACGGC chr2:183124124-183124624 - 17 3.83e-05 TGGGGTTGCG TAACTTCCGGACCTG CGCTATGCTT chr1:154182976-154183476 - 39 4.17e-05 GGCGGGTTGG TGAGTTCCGGTATTT CAGGGCGTAG chr7:130205248-130205748 - 20 4.17e-05 AGACTACCTA GTTCTTCCGGTAACT TTAGAGCCGC chr19:10194308-10194808 - 8 4.17e-05 AGCTTTGGGT TCGTTTCCGGGGTCC CCTTCTT chr16:67872821-67873321 - 44 4.53e-05 CCAACCGCCT CCACTTCCGGCACCC ACGAGCCGAG chr12:69470130-69470630 - 38 4.53e-05 TCTTGGAAAA GCACTTCCGGGGGAG CGGGGGAGGG chr6:49463063-49463563 + 84 4.53e-05 GGTTAGATGC CCGTTTCCGCTTTCT TC chr3:15427348-15427848 - 12 4.53e-05 CAAGGCCGTG GGACTTCCGGCGTCG GGTAGGAACT chr1:150487007-150487507 + 35 4.53e-05 TTACATTTTC GGTCTTCCGGTCAGC CGGAACCACT chr20:20017058-20017558 - 22 4.92e-05 AGACGGGGTA CTGCTTCCGGGCTAC GAGTTGCTGG chr17:28357388-28357888 + 18 4.92e-05 GCGCTTAGCG TTACTTCCGGCGCGC GGCGGGCGGA chr6:34887830-34888330 + 11 4.92e-05 GGCCAGGATC TTACTTCCTGTCGTC GCGCAGCGAT chr19:55279896-55280396 - 13 4.92e-05 GAAACCGTGC GTATTTCCGGTTAAG ATGGCGGCGC chr2:112584277-112584777 - 66 5.34e-05 CCCAGCCTGG TTTTTTCCGGTAGCC AATTGAACTA chr13:30617633-30618133 - 73 5.34e-05 ACTAGGAAGG CGGCTTCCGGCTTGA GTCCGCGGCA chr10:96129696-96130196 + 78 5.79e-05 CGGCCTCCGT TCTCTTCCGCTTGTC TCAGGTAA chr16:690202-690702 - 12 6.25e-05 AAGAAGAGGA CCACTTCCGGCGAGG GACGGGAAAG chr17:74203423-74203923 - 30 6.25e-05 AACGAGACTT CCGTTTCCGGGCAGT TAAACCCTCC chr19:34677034-34677534 - 78 6.25e-05 CGTGCCAA GGTCTTCCGGGTCAT TCCTGCGCTC chr1:179882537-179883037 + 29 6.25e-05 CCCGGCTAGA AGAGTTCCGGTCCGA TTCTGCGAAA chr2:3574953-3575453 + 83 6.25e-05 GCTTCTCAGT GATGTTCCGGTTTCC GCC chr7:30594503-30595003 + 41 6.75e-05 CTTCGGCGGG GTCCTTCCGGGTTTT GTGTCGAATC chr6:90587028-90587528 - 45 7.28e-05 TCTCTCGCGG TATCATCCGGTTGCT GAGGCCCTGT chr16:667901-668401 + 62 7.28e-05 aggtcggggc cgggttccgggtcgg ggagcggctc chr14:30621969-30622469 + 78 7.28e-05 CTTTGGCCCC GCCCTTCCGGGCTTT GCTTCCGG chr5:92552209-92552709 - 86 7.28e-05 . TTGCTTCCTGTGGCT ATTTTTAGTG chr6:143450498-143450998 + 36 7.28e-05 GCCCGGGACC CCGTTTCCGGGGGTA GTCTAATGAA chr1:37989839-37990339 - 40 7.83e-05 AAGTCCCGGG GCACTTCCGGCACTC GCGGAACTTT chr1:155140249-155140749 - 83 8.42e-05 GGA GGACTTCCGGACGCC AACATCCGGG chr17:80415116-80415616 - 69 9.03e-05 TGAGATCCCT CCGCTTCCGCGCCGG AAACTGGGCT chr3:48439898-48440398 + 67 9.67e-05 CCCTGGAGCG CCGCATCCGGTAGCG AGAGTTCAAC chr14:44961891-44962391 + 39 1.03e-04 CACGGCAAGT GGATTTCCGGGTCAA GAGGTCCGCG chr1:120176322-120176822 + 23 1.03e-04 CAAGAGCTTT CCACTACCGGTCCCC AGAATTGGCT chr19:58499269-58499769 - 41 1.11e-04 AAGGCTTCCT CTACTTCCGCGACCG CCTCGGGGAC chr16:11915835-11916335 + 40 1.11e-04 CTGGCCGCCC CCGTTTCCGGCTATT TAGCGCGGCG chr10:87878916-87879416 - 48 1.18e-04 ATGATAAGAC TGGTTTCCTGTTTCA GAACTCTCCT chr19:44259548-44260048 + 85 1.26e-04 GGGCGGTAGC CTGTTTCCGCTCGGG C chr12:110048404-11004890 + 26 1.26e-04 CGTCCTGGTC TAAGTTCCGCTTCTG CCTAAGATTT chr22:24805653-24806153 + 85 1.34e-04 AGTAGCCCCA CCATTTCCTGTGACT T chr12:34022154-34022654 + 30 1.51e-04 TTGAGAGGGT AATCATCCGGTCCGT TATCTAAACC chr12:38316440-38316940 + 37 1.51e-04 TGGAGAGGGT AATCATCCGGTCCGT TATCTAAACC chr1:165768697-165769197 - 7 1.51e-04 TCCGATACGA GCCTTTCCGGTGCTA TGCCCC chr15:65610925-65611425 - 43 1.60e-04 GCGCGGCCTT ATAGTTCCGGCTGTG GCGCGCGGAC chr12:123383453-12338395 + 83 1.90e-04 GGTCAAAGGT CGGGTTCCGGTCAAG CCC chr9:36190642-36191142 - 53 2.01e-04 AGCCCTACCC GTGTATCCGGTCGGT CTAGGCGGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BBRCTTCCGGTYBBB MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:159263006-159263506 1.2e-08 44_[+1]_41 chr1:28088353-28088853 4.1e-08 81_[-1]_4 chr6:28136607-28137107 4.1e-08 24_[-1]_61 chr17:50372899-50373399 4.1e-08 83_[+1]_2 chr19:16197635-16198135 4.1e-08 68_[-1]_17 chr14:74881627-74882127 7.8e-08 63_[+1]_22 chr15:89893816-89894316 1.2e-07 [+1]_85 chr17:30906030-30906530 1.2e-07 4_[+1]_81 chr19:47256203-47256703 1.2e-07 72_[-1]_13 chr1:43389617-43390117 1.7e-07 56_[+1]_29 chr17:57849799-57850299 1.7e-07 47_[-1]_38 chr17:59707369-59707869 1.7e-07 62_[-1]_23 chr1:20507949-20508449 1.7e-07 24_[-1]_61 chr11:64317420-64317920 1.7e-07 4_[-1]_81 chr15:65517429-65517929 2.2e-07 52_[+1]_33 chr8:142717957-142718457 3e-07 61_[-1]_24 chr2:232550398-232550898 3e-07 37_[-1]_48 chr3:14651489-14651989 4e-07 60_[+1]_25 chr16:77190860-77191360 4e-07 62_[-1]_23 chr9:85940763-85941263 4e-07 30_[+1]_55 chr11:118359313-11835981 4e-07 71_[+1]_14 chrX:48958117-48958617 4e-07 65_[+1]_20 chr8:143281438-143281938 5.1e-07 54_[-1]_31 chr4:152779737-152780237 5.1e-07 5_[+1]_80 chr15:90265356-90265856 5.1e-07 84_[+1]_1 chr19:12681637-12682137 6.6e-07 55_[-1]_30 chr19:49580397-49580897 6.6e-07 21_[-1]_64 chr1:43172076-43172576 6.6e-07 51_[+1]_34 chr12:49567884-49568384 8.4e-07 79_[+1]_6 chr19:8832101-8832601 8.4e-07 14_[+1]_71 chr6:36874590-36875090 1e-06 59_[+1]_26 chr21:46286062-46286562 1e-06 12_[+1]_73 chr3:15098912-15099412 1.3e-06 59_[-1]_26 chr19:11435313-11435813 1.3e-06 83_[-1]_2 chr6:57317393-57317893 1.3e-06 22_[+1]_63 chr5:110738752-110739252 1.6e-06 39_[+1]_46 chr5:83077349-83077849 1.6e-06 39_[-1]_46 chr16:74296589-74297089 1.6e-06 17_[-1]_68 chr1:1615150-1615650 1.6e-06 62_[+1]_23 chr14:67359649-67360149 1.9e-06 8_[+1]_77 chr1:44213173-44213673 1.9e-06 40_[-1]_45 chr3:9749729-9750229 1.9e-06 14_[+1]_71 chr12:110450055-11045055 2.3e-06 57_[+1]_28 chr19:5720087-5720587 2.3e-06 21_[+1]_64 chr1:155934240-155934740 2.7e-06 15_[+1]_70 chr14:21511156-21511656 2.7e-06 13_[+1]_72 chr7:99919315-99919815 2.7e-06 77_[-1]_8 chr5:142024654-142025154 2.7e-06 32_[+1]_53 chr12:51172704-51173204 3.2e-06 14_[+1]_71 chr20:46364169-46364669 3.2e-06 31_[-1]_54 chr11:45917639-45918139 3.7e-06 48_[+1]_37 chr9:111630923-111631423 3.7e-06 81_[-1]_4 chr20:31738964-31739464 3.7e-06 10_[+1]_75 chr2:100178086-100178586 3.7e-06 68_[-1]_17 chr1:100132760-100133260 4.4e-06 33_[+1]_52 chr2:24076212-24076712 4.4e-06 63_[+1]_22 chrX:47836611-47837111 4.4e-06 83_[-1]_2 chr2:55269025-55269525 4.4e-06 44_[+1]_41 chr19:36772817-36773317 4.4e-06 70_[+1]_15 chr19:43950898-43951398 5e-06 79_[+1]_6 chr5:81301369-81301869 5e-06 22_[+1]_63 chr16:84186779-84187279 5e-06 60_[+1]_25 chr6:27693785-27694285 5e-06 34_[-1]_51 chr12:57745062-57745562 5e-06 17_[+1]_68 chr8:33484925-33485425 5e-06 46_[-1]_39 chr17:4940242-4940742 5e-06 41_[-1]_44 chr19:3761735-3762235 5e-06 50_[-1]_35 chr17:39199800-39200300 5e-06 30_[+1]_55 chr19:39435664-39436164 5.8e-06 70_[-1]_15 chr14:21383838-21384338 5.8e-06 17_[+1]_68 chr6:7389575-7390075 5.8e-06 32_[+1]_53 chr19:50376126-50376626 5.8e-06 83_[-1]_2 chr7:92245698-92246198 5.8e-06 20_[+1]_65 chr11:18526680-18527180 5.8e-06 83_[+1]_2 chr13:52194233-52194733 5.8e-06 21_[+1]_64 chrX:153928079-153928579 5.8e-06 61_[-1]_24 chr5:149345136-149345636 6.6e-06 70_[-1]_15 chr19:49451588-49452088 6.6e-06 32_[+1]_53 chr1:150293606-150294106 7.5e-06 40_[+1]_45 chr12:76348204-76348704 7.5e-06 48_[-1]_37 chr3:119498180-119498680 7.5e-06 41_[+1]_44 chr10:18659024-18659524 7.5e-06 1_[-1]_84 chr15:55196721-55197221 8.5e-06 30_[-1]_55 chr19:38374290-38374790 8.5e-06 60_[+1]_25 chr12:6493133-6493633 8.5e-06 23_[+1]_62 chr11:62621943-62622443 8.5e-06 18_[+1]_67 chr12:48105899-48106399 9.6e-06 17_[-1]_68 chr16:1420557-1421057 9.6e-06 26_[-1]_59 chr10:97401107-97401607 9.6e-06 37_[+1]_48 chr5:121961599-121962099 9.6e-06 56_[+1]_29 chr15:75335800-75336300 9.6e-06 45_[-1]_40 chr15:74099992-74100492 9.6e-06 45_[+1]_40 chr19:36666555-36667055 1.1e-05 69_[-1]_16 chr1:230978766-230979266 1.1e-05 68_[+1]_17 chr7:44200680-44201180 1.1e-05 84_[-1]_1 chr7:108569513-108570013 1.2e-05 42_[-1]_43 chr3:180601881-180602381 1.2e-05 30_[+1]_55 chr22:37686128-37686628 1.2e-05 16_[-1]_69 chr7:5822859-5823359 1.3e-05 43_[-1]_42 chr1:150321317-150321817 1.3e-05 18_[+1]_67 chr15:40382678-40383178 1.3e-05 44_[-1]_41 chr7:139340030-139340530 1.3e-05 48_[-1]_37 chr16:89657416-89657916 1.3e-05 75_[+1]_10 chr1:150926120-150926620 1.3e-05 30_[+1]_55 chr17:42773190-42773690 1.5e-05 57_[+1]_28 chr21:25734806-25735306 1.5e-05 68_[+1]_17 chr19:4723723-4724223 1.5e-05 37_[+1]_48 chr3:129160952-129161452 1.5e-05 74_[-1]_11 chrX:71366023-71366523 1.5e-05 78_[+1]_7 chr12:119667676-11966817 1.7e-05 74_[-1]_11 chr3:183884631-183885131 1.7e-05 68_[+1]_17 chr5:133051421-133051921 1.7e-05 30_[-1]_55 chr19:43827126-43827626 1.8e-05 80_[+1]_5 chr17:1463107-1463607 2e-05 47_[+1]_38 chr7:103297173-103297673 2e-05 39_[-1]_46 chr17:7572180-7572680 2e-05 61_[-1]_24 chr16:807577-808077 2e-05 29_[+1]_56 chr19:44071882-44072382 2.2e-05 46_[+1]_39 chr8:74350128-74350628 2.2e-05 46_[-1]_39 chr7:1504132-1504632 2.2e-05 83_[-1]_2 chr3:14178550-14179050 2.4e-05 18_[+1]_67 chr8:27311314-27311814 2.4e-05 64_[+1]_21 chr1:200620580-200621080 2.4e-05 35_[-1]_50 chr12:28190237-28190737 2.4e-05 4_[+1]_81 chr16:2682197-2682697 2.7e-05 7_[-1]_78 chr11:93783967-93784467 2.7e-05 34_[-1]_51 chr1:1375104-1375604 2.7e-05 23_[+1]_62 chr12:122266259-12226675 2.7e-05 63_[-1]_22 chr1:234373224-234373724 2.7e-05 7_[-1]_78 chr1:33127058-33127558 2.7e-05 33_[+1]_52 chr17:18087671-18088171 2.7e-05 57_[+1]_28 chr13:45464572-45465072 2.7e-05 49_[-1]_36 chr7:44044350-44044850 2.7e-05 61_[+1]_24 chr16:30650436-30650936 2.9e-05 20_[-1]_65 chr19:58519640-58520140 3.2e-05 40_[+1]_45 chr19:1383558-1384058 3.2e-05 60_[+1]_25 chr11:64269821-64270321 3.2e-05 33_[-1]_52 chr11:66002007-66002507 3.2e-05 36_[+1]_49 chr11:2400275-2400775 3.5e-05 66_[+1]_19 chr19:14571811-14572311 3.5e-05 69_[+1]_16 chr1:173714620-173715120 3.5e-05 29_[+1]_56 chr1:156740987-156741487 3.8e-05 67_[-1]_18 chr5:176448120-176448620 3.8e-05 5_[-1]_80 chr2:183124124-183124624 3.8e-05 16_[-1]_69 chr1:154182976-154183476 4.2e-05 38_[-1]_47 chr7:130205248-130205748 4.2e-05 19_[-1]_66 chr19:10194308-10194808 4.2e-05 7_[-1]_78 chr16:67872821-67873321 4.5e-05 43_[-1]_42 chr12:69470130-69470630 4.5e-05 37_[-1]_48 chr6:49463063-49463563 4.5e-05 83_[+1]_2 chr3:15427348-15427848 4.5e-05 11_[-1]_74 chr1:150487007-150487507 4.5e-05 34_[+1]_51 chr20:20017058-20017558 4.9e-05 21_[-1]_64 chr17:28357388-28357888 4.9e-05 17_[+1]_68 chr6:34887830-34888330 4.9e-05 10_[+1]_75 chr19:55279896-55280396 4.9e-05 12_[-1]_73 chr2:112584277-112584777 5.3e-05 65_[-1]_20 chr13:30617633-30618133 5.3e-05 72_[-1]_13 chr10:96129696-96130196 5.8e-05 77_[+1]_8 chr16:690202-690702 6.3e-05 11_[-1]_74 chr17:74203423-74203923 6.3e-05 29_[-1]_56 chr19:34677034-34677534 6.3e-05 77_[-1]_8 chr1:179882537-179883037 6.3e-05 28_[+1]_57 chr2:3574953-3575453 6.3e-05 82_[+1]_3 chr7:30594503-30595003 6.8e-05 40_[+1]_45 chr6:90587028-90587528 7.3e-05 44_[-1]_41 chr16:667901-668401 7.3e-05 61_[+1]_24 chr14:30621969-30622469 7.3e-05 77_[+1]_8 chr5:92552209-92552709 7.3e-05 85_[-1] chr6:143450498-143450998 7.3e-05 35_[+1]_50 chr1:37989839-37990339 7.8e-05 39_[-1]_46 chr1:155140249-155140749 8.4e-05 82_[-1]_3 chr17:80415116-80415616 9e-05 68_[-1]_17 chr3:48439898-48440398 9.7e-05 66_[+1]_19 chr14:44961891-44962391 0.0001 38_[+1]_47 chr1:120176322-120176822 0.0001 22_[+1]_63 chr19:58499269-58499769 0.00011 40_[-1]_45 chr16:11915835-11916335 0.00011 39_[+1]_46 chr10:87878916-87879416 0.00012 47_[-1]_38 chr19:44259548-44260048 0.00013 84_[+1]_1 chr12:110048404-11004890 0.00013 25_[+1]_60 chr22:24805653-24806153 0.00013 84_[+1]_1 chr12:34022154-34022654 0.00015 29_[+1]_56 chr12:38316440-38316940 0.00015 36_[+1]_49 chr1:165768697-165769197 0.00015 6_[-1]_79 chr15:65610925-65611425 0.00016 42_[-1]_43 chr12:123383453-12338395 0.00019 82_[+1]_3 chr9:36190642-36191142 0.0002 52_[-1]_33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BBRCTTCCGGTYBBB MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF BBRCTTCCGGTYBBB width=15 seqs=188 chr5:159263006-159263506 ( 45) CCACTTCCGGTTTTT 1 chr1:28088353-28088853 ( 82) TTACTTCCGGTTCCT 1 chr6:28136607-28137107 ( 25) CCACTTCCGGTTGCT 1 chr17:50372899-50373399 ( 84) TCACTTCCGGTCTCG 1 chr19:16197635-16198135 ( 69) CCACTTCCGGTTCGG 1 chr14:74881627-74882127 ( 64) CCACTTCCGGTTGTT 1 chr15:89893816-89894316 ( 1) TCACTTCCGGTTGGT 1 chr17:30906030-30906530 ( 5) TGACTTCCGGTTCCT 1 chr19:47256203-47256703 ( 73) TCACTTCCGGTCCTG 1 chr1:43389617-43390117 ( 57) CAACTTCCGGTTCCT 1 chr17:57849799-57850299 ( 48) CCGCTTCCGGTTCCG 1 chr17:59707369-59707869 ( 63) TCACTTCCGGTCCGG 1 chr1:20507949-20508449 ( 25) CCGCTTCCGGTTCCG 1 chr11:64317420-64317920 ( 5) CCACTTCCGGTTCTC 1 chr15:65517429-65517929 ( 53) GCACTTCCGGTTCGT 1 chr8:142717957-142718457 ( 62) TTGCTTCCGGTTTCT 1 chr2:232550398-232550898 ( 38) GTACTTCCGGTTTTG 1 chr3:14651489-14651989 ( 61) ACACTTCCGGTTGCG 1 chr16:77190860-77191360 ( 63) ACACTTCCGGTTGCG 1 chr9:85940763-85941263 ( 31) TAACTTCCGGTCTCG 1 chr11:118359313-11835981 ( 72) TAACTTCCGGTTGCT 1 chrX:48958117-48958617 ( 66) TCACTTCCGGTCCCA 1 chr8:143281438-143281938 ( 55) TTGCTTCCGGTTTTT 1 chr4:152779737-152780237 ( 6) CTACTTCCGGTCTCC 1 chr15:90265356-90265856 ( 85) CCACTTCCGGTCTTA 1 chr19:12681637-12682137 ( 56) CAACTTCCGGTCTTT 1 chr19:49580397-49580897 ( 22) CTACTTCCGGTGCCT 1 chr1:43172076-43172576 ( 52) ATACTTCCGGTTTGT 1 chr12:49567884-49568384 ( 80) TCTCTTCCGGTTCGT 1 chr19:8832101-8832601 ( 15) CCGCTTCCGGTCTGG 1 chr6:36874590-36875090 ( 60) ACACTTCCGGTCCGT 1 chr21:46286062-46286562 ( 13) CGACTTCCGGTTCGC 1 chr3:15098912-15099412 ( 60) TGTCTTCCGGTTTCG 1 chr19:11435313-11435813 ( 84) TCACTTCCGGTCGTA 1 chr6:57317393-57317893 ( 23) CCTCTTCCGGTTTCA 1 chr5:110738752-110739252 ( 40) TGACTTCCGGTTGTC 1 chr5:83077349-83077849 ( 40) CTACTTCCGGTATCT 1 chr16:74296589-74297089 ( 18) CTTCTTCCGGTTCGT 1 chr1:1615150-1615650 ( 63) GCACTTCCGGTGCTT 1 chr14:67359649-67360149 ( 9) CCGCTTCCGGTTGTC 1 chr1:44213173-44213673 ( 41) ACACTTCCGGTCGGT 1 chr3:9749729-9750229 ( 15) CTACTTCCGGTGGTG 1 chr12:110450055-11045055 ( 58) GCGCTTCCGGTCTGG 1 chr19:5720087-5720587 ( 22) CCTCTTCCGGTCTCC 1 chr1:155934240-155934740 ( 16) CCTCTTCCGGTCGTG 1 chr14:21511156-21511656 ( 14) TCATTTCCGGTGTCG 1 chr7:99919315-99919815 ( 78) CAGCTTCCGGTCTTG 1 chr5:142024654-142025154 ( 33) GAACTTCCGGTTTGC 1 chr12:51172704-51173204 ( 15) TCACTTCCGGTCACC 1 chr20:46364169-46364669 ( 32) GCACTTCCGGTGGGG 1 chr11:45917639-45918139 ( 49) CTGCTTCCGGTCTTA 1 chr9:111630923-111631423 ( 82) CTGCTTCCGGTGTGT 1 chr20:31738964-31739464 ( 11) TGACTTCCGGTATTG 1 chr2:100178086-100178586 ( 69) TAACTTCCGGGTTGT 1 chr1:100132760-100133260 ( 34) ATTCTTCCGGTTCTG 1 chr2:24076212-24076712 ( 64) ACACTTCCGGGCTCT 1 chrX:47836611-47837111 ( 84) CCGCTTCCGGTCACT 1 chr2:55269025-55269525 ( 45) GGGCTTCCGGTCCCG 1 chr19:36772817-36773317 ( 71) GTGCTTCCGGTTCTC 1 chr19:43950898-43951398 ( 80) GCACTTCCGGTCAGG 1 chr5:81301369-81301869 ( 23) GTGCTTCCGGTCTCC 1 chr16:84186779-84187279 ( 61) GGTCTTCCGGTTTGG 1 chr6:27693785-27694285 ( 35) TCATTTCCGGGTCCG 1 chr12:57745062-57745562 ( 18) GTACTTCCGGTGGGG 1 chr8:33484925-33485425 ( 47) CAACTTCCGGTCGGA 1 chr17:4940242-4940742 ( 42) GGACTTCCGGTCCTA 1 chr19:3761735-3762235 ( 51) ACGCTTCCGGTGCCT 1 chr17:39199800-39200300 ( 31) TGACTTCCGGTTACA 1 chr19:39435664-39436164 ( 71) CCTTTTCCGGTTGCG 1 chr14:21383838-21384338 ( 18) CCGCTTCCGGGTCCC 1 chr6:7389575-7390075 ( 33) GGGCTTCCGGTTGGG 1 chr19:50376126-50376626 ( 84) GAACTTCCGGTCCGC 1 chr7:92245698-92246198 ( 21) TCGCTTCCGGGTTCA 1 chr11:18526680-18527180 ( 84) TCACTTCCGGGCCGC 1 chr13:52194233-52194733 ( 22) CCGTTTCCGGTCTGG 1 chrX:153928079-153928579 ( 62) TGTCTTCCGGTTCGC 1 chr5:149345136-149345636 ( 71) ATGCTTCCGGTTGCC 1 chr19:49451588-49452088 ( 33) ACACTTCCGGTCTAT 1 chr1:150293606-150294106 ( 41) CCGCTTCCGGTAGTG 1 chr12:76348204-76348704 ( 49) TGGCTTCCGGGTTTT 1 chr3:119498180-119498680 ( 42) TCACTTCCGGGGGTG 1 chr10:18659024-18659524 ( 2) TCACTTCCGGTAGGA 1 chr15:55196721-55197221 ( 31) TAACTTCCGGTGACG 1 chr19:38374290-38374790 ( 61) CAACTTCCGGTCACC 1 chr12:6493133-6493633 ( 24) GTGCTTCCGGTCCGC 1 chr11:62621943-62622443 ( 19) TGATTTCCGGTCCCA 1 chr12:48105899-48106399 ( 18) ACTCTTCCGGTGCTG 1 chr16:1420557-1421057 ( 27) CGGTTTCCGGTTTCC 1 chr10:97401107-97401607 ( 38) TCACTTCCGGATTCG 1 chr5:121961599-121962099 ( 57) TCAGTTCCGGTTTTC 1 chr15:75335800-75336300 ( 46) CTTTTTCCGGTCCCG 1 chr15:74099992-74100492 ( 46) CTTTTTCCGGTCCCG 1 chr19:36666555-36667055 ( 70) CTACTTCCGGTAGGA 1 chr1:230978766-230979266 ( 69) AGTCTTCCGGTCTGG 1 chr7:44200680-44201180 ( 85) CCACTTCCGGATCCG 1 chr7:108569513-108570013 ( 43) CCACTTCCGGCTTCA 1 chr3:180601881-180602381 ( 31) ACACTTCCGGGTGTA 1 chr22:37686128-37686628 ( 17) ACACTTCCGGGTGTA 1 chr7:5822859-5823359 ( 44) ATGCTTCCGGTTAGG 1 chr1:150321317-150321817 ( 19) AGGTTTCCGGTTCCG 1 chr15:40382678-40383178 ( 45) AAACTTCCGGTAGCT 1 chr7:139340030-139340530 ( 49) CCTTTTCCGGTGTTG 1 chr16:89657416-89657916 ( 76) GGACTTCCGGGGTCG 1 chr1:150926120-150926620 ( 31) TTGCTTCCGGGCGTT 1 chr17:42773190-42773690 ( 58) TAGCTTCCGGGTTTC 1 chr21:25734806-25735306 ( 69) GTGCTTCCGGGTCCC 1 chr19:4723723-4724223 ( 38) CATCTTCCGGTGGGT 1 chr3:129160952-129161452 ( 75) TCACTTCCTGTCCCT 1 chrX:71366023-71366523 ( 79) TTATTTCCGGTCTAT 1 chr12:119667676-11966817 ( 75) CGACTTCCGCTTCCG 1 chr3:183884631-183885131 ( 69) CTACTTCCGGGGCGA 1 chr5:133051421-133051921 ( 31) AAACTTCCGGTAGTG 1 chr19:43827126-43827626 ( 81) CCTTTTCCGGTGTCC 1 chr17:1463107-1463607 ( 48) TGGTTTCCGGTGTGG 1 chr7:103297173-103297673 ( 40) GTGCTTCCGGGGTCG 1 chr17:7572180-7572680 ( 62) AGGCTTCCGGGCTCT 1 chr16:807577-808077 ( 30) TAATTTCCGGGTCCC 1 chr19:44071882-44072382 ( 47) GCACTTCCGCTCCCG 1 chr8:74350128-74350628 ( 47) GCGTTTCCGGGTTTT 1 chr7:1504132-1504632 ( 84) TTCCTTCCGGTTGTT 1 chr3:14178550-14179050 ( 19) CTATTTCCGGTGTAT 1 chr8:27311314-27311814 ( 65) CTACTTCCGGCTGCA 1 chr1:200620580-200621080 ( 36) GCACTTCCGGGGGGC 1 chr12:28190237-28190737 ( 5) CAACTTCCGGGGGCA 1 chr16:2682197-2682697 ( 8) GAAGTTCCGGTCCCG 1 chr11:93783967-93784467 ( 35) AAACTTCCGGGCCTA 1 chr1:1375104-1375604 ( 24) CGGTTTCCGGTTAGT 1 chr12:122266259-12226675 ( 64) CGGTTTCCGGGTTGG 1 chr1:234373224-234373724 ( 8) GGACTTCCTGTTTCG 1 chr1:33127058-33127558 ( 34) GGTCTTCCGGTAGCG 1 chr17:18087671-18088171 ( 58) TGGCTTCCGGGCGCA 1 chr13:45464572-45465072 ( 50) CTATTTCCGGTTGAA 1 chr7:44044350-44044850 ( 62) CCATTTCCGCTTCCT 1 chr16:30650436-30650936 ( 21) CGTCTTCCGGGGTGG 1 chr19:58519640-58520140 ( 41) ACGTTTCCGGTATTT 1 chr19:1383558-1384058 ( 61) CAGGTTCCGGTTTCC 1 chr11:64269821-64270321 ( 34) TCCCTTCCGGTGCGT 1 chr11:66002007-66002507 ( 37) TGAGTTCCGGGTCCG 1 chr11:2400275-2400775 ( 67) TCGTTTCCGGGGCTG 1 chr19:14571811-14572311 ( 70) CAGCTTCCGGGTCAT 1 chr1:173714620-173715120 ( 30) CTACTTCCGGAGCCG 1 chr1:156740987-156741487 ( 68) TGTGTTCCGGTTTCC 1 chr5:176448120-176448620 ( 6) CCACATCCGGTCTGA 1 chr2:183124124-183124624 ( 17) TAACTTCCGGACCTG 1 chr1:154182976-154183476 ( 39) TGAGTTCCGGTATTT 1 chr7:130205248-130205748 ( 20) GTTCTTCCGGTAACT 1 chr19:10194308-10194808 ( 8) TCGTTTCCGGGGTCC 1 chr16:67872821-67873321 ( 44) CCACTTCCGGCACCC 1 chr12:69470130-69470630 ( 38) GCACTTCCGGGGGAG 1 chr6:49463063-49463563 ( 84) CCGTTTCCGCTTTCT 1 chr3:15427348-15427848 ( 12) GGACTTCCGGCGTCG 1 chr1:150487007-150487507 ( 35) GGTCTTCCGGTCAGC 1 chr20:20017058-20017558 ( 22) CTGCTTCCGGGCTAC 1 chr17:28357388-28357888 ( 18) TTACTTCCGGCGCGC 1 chr6:34887830-34888330 ( 11) TTACTTCCTGTCGTC 1 chr19:55279896-55280396 ( 13) GTATTTCCGGTTAAG 1 chr2:112584277-112584777 ( 66) TTTTTTCCGGTAGCC 1 chr13:30617633-30618133 ( 73) CGGCTTCCGGCTTGA 1 chr10:96129696-96130196 ( 78) TCTCTTCCGCTTGTC 1 chr16:690202-690702 ( 12) CCACTTCCGGCGAGG 1 chr17:74203423-74203923 ( 30) CCGTTTCCGGGCAGT 1 chr19:34677034-34677534 ( 78) GGTCTTCCGGGTCAT 1 chr1:179882537-179883037 ( 29) AGAGTTCCGGTCCGA 1 chr2:3574953-3575453 ( 83) GATGTTCCGGTTTCC 1 chr7:30594503-30595003 ( 41) GTCCTTCCGGGTTTT 1 chr6:90587028-90587528 ( 45) TATCATCCGGTTGCT 1 chr16:667901-668401 ( 62) CGGGTTCCGGGTCGG 1 chr14:30621969-30622469 ( 78) GCCCTTCCGGGCTTT 1 chr5:92552209-92552709 ( 86) TTGCTTCCTGTGGCT 1 chr6:143450498-143450998 ( 36) CCGTTTCCGGGGGTA 1 chr1:37989839-37990339 ( 40) GCACTTCCGGCACTC 1 chr1:155140249-155140749 ( 83) GGACTTCCGGACGCC 1 chr17:80415116-80415616 ( 69) CCGCTTCCGCGCCGG 1 chr3:48439898-48440398 ( 67) CCGCATCCGGTAGCG 1 chr14:44961891-44962391 ( 39) GGATTTCCGGGTCAA 1 chr1:120176322-120176822 ( 23) CCACTACCGGTCCCC 1 chr19:58499269-58499769 ( 41) CTACTTCCGCGACCG 1 chr16:11915835-11916335 ( 40) CCGTTTCCGGCTATT 1 chr10:87878916-87879416 ( 48) TGGTTTCCTGTTTCA 1 chr19:44259548-44260048 ( 85) CTGTTTCCGCTCGGG 1 chr12:110048404-11004890 ( 26) TAAGTTCCGCTTCTG 1 chr22:24805653-24806153 ( 85) CCATTTCCTGTGACT 1 chr12:34022154-34022654 ( 30) AATCATCCGGTCCGT 1 chr12:38316440-38316940 ( 37) AATCATCCGGTCCGT 1 chr1:165768697-165769197 ( 7) GCCTTTCCGGTGCTA 1 chr15:65610925-65611425 ( 43) ATAGTTCCGGCTGTG 1 chr12:123383453-12338395 ( 83) CGGGTTCCGGTCAAG 1 chr9:36190642-36191142 ( 53) GTGTATCCGGTCGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BBRCTTCCGGTYBBB MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51600 bayes= 9.18011 E= 1.0e-166 -75 43 -41 36 -64 59 -41 6 123 -337 9 -54 -1420 144 -211 -27 -281 -1420 -1420 211 -540 -1420 -1420 215 -1420 186 -1420 -1420 -1420 186 -1420 -1420 -1420 -1420 181 -281 -1420 -252 179 -1420 -308 -237 -37 166 -140 19 -61 91 -140 28 -14 56 -194 59 -2 19 -59 -45 37 38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BBRCTTCCGGTYBBB MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 188 E= 1.0e-166 0.132979 0.372340 0.207447 0.287234 0.143617 0.414894 0.207447 0.234043 0.526596 0.026596 0.292553 0.154255 0.000000 0.750000 0.063830 0.186170 0.031915 0.000000 0.000000 0.968085 0.005319 0.000000 0.000000 0.994681 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.968085 0.031915 0.000000 0.047872 0.952128 0.000000 0.026596 0.053191 0.212766 0.707447 0.085106 0.313830 0.180851 0.420213 0.085106 0.335106 0.250000 0.329787 0.058511 0.414894 0.271277 0.255319 0.148936 0.202128 0.356383 0.292553 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif BBRCTTCCGGTYBBB MEME-1 regular expression -------------------------------------------------------------------------------- [CTG][CTG][AG]CTTCCGG[TG][TC][CTG][CGT][GTC] -------------------------------------------------------------------------------- Time 359.03 secs. ******************************************************************************** ******************************************************************************** MOTIF MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT MEME-2 width = 36 sites = 13 llr = 536 E-value = 8.3e-110 ******************************************************************************** -------------------------------------------------------------------------------- Motif MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 3:19::1:a::8:1::1a19::a:::::2:1aa:8: pos.-specific C 52::::19:::1:::a::::a9:1aa::188::91: probability G ::9:aa:1:aa2a:::9:81:::8:::a82:::11: matrix T 28:1::8::::::9a:::1::1:1::a:::1:::1a bits 2.2 * * * * * ** * 1.9 ** *** * ** * * * **** ** * 1.7 *** *** **** * ** * **** ** * 1.5 ***** **** ****** **** **** *** * Relative 1.3 ********** ****** **** **** * *** * Entropy 1.1 *************************** ***** * (59.5 bits) 0.9 *********************************** 0.6 ************************************ 0.4 ************************************ 0.2 ************************************ 0.0 ------------------------------------ Multilevel CTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT consensus A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------ chr10:23420805-23421305 - 11 5.90e-22 CAGGTGGATC ATGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT AGTGAAACCC chr17:1258901-1259401 - 56 8.54e-22 GCGGATCTC TTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT GGCGAAATCC chr16:30598283-30598783 + 33 1.12e-21 ggcagatcac ctgaggtcaggagttcgagaccagcctgaccaacat ggtgaaaccc chr10:5853639-5854139 + 50 1.44e-21 ggtagatcac ctgaggtcaggagttcgagaccagcctgggcaacat ggcaaaactc chr1:27959119-27959619 - 40 4.37e-21 GGCGGATCAC CTGAGGTCAGGAGTTCGAGACCAGCCTGGCAAACAT GGCGAAACCC chr16:25055673-25056173 + 30 5.09e-20 ggtggatcac ctgaggtcaggggttcgagaccagcctggccaacct gatgaaaccc chr18:22184439-22184939 - 60 2.81e-19 ATCAC TTGAGGACAGGAGTTCGAGACCACCCTGGCCAACAT GGTGAAACCC chr5:181215948-181216448 - 35 4.37e-19 GGTGGATCAC CTGAGGTCAGGCGTTCGAGACCAGCCTGACCAACGT GGTGAACCCC chr3:169763010-169763510 + 26 1.14e-18 ggcggatcac ctgaggtcaggagttcgaggccagcctgcccaactt tactgaaaat chr6:27544050-27544550 - 42 1.23e-18 CGGGTGGATC ATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAT GATGGAACCC chr1:150876802-150877302 + 43 4.16e-18 gccggatcac ctgtggccaggggttcgaaaccagcctggccaacat ggcgaaaccc chr10:8702990-8703490 + 14 5.20e-18 tgggtggatc acgaggtgaggagttcgatactagcctggccaacat agtgaaaccc chr16:75445725-75446225 + 33 1.67e-17 cgggtggatc acaaggtcaggagttcaagaccagcctgggcaagat ggtgaaacct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:23420805-23421305 5.9e-22 10_[-2]_54 chr17:1258901-1259401 8.5e-22 55_[-2]_9 chr16:30598283-30598783 1.1e-21 32_[+2]_32 chr10:5853639-5854139 1.4e-21 49_[+2]_15 chr1:27959119-27959619 4.4e-21 39_[-2]_25 chr16:25055673-25056173 5.1e-20 29_[+2]_35 chr18:22184439-22184939 2.8e-19 59_[-2]_5 chr5:181215948-181216448 4.4e-19 34_[-2]_30 chr3:169763010-169763510 1.1e-18 25_[+2]_39 chr6:27544050-27544550 1.2e-18 41_[-2]_23 chr1:150876802-150877302 4.2e-18 42_[+2]_22 chr10:8702990-8703490 5.2e-18 13_[+2]_51 chr16:75445725-75446225 1.7e-17 32_[+2]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT width=36 seqs=13 chr10:23420805-23421305 ( 11) ATGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT 1 chr17:1258901-1259401 ( 56) TTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT 1 chr16:30598283-30598783 ( 33) CTGAGGTCAGGAGTTCGAGACCAGCCTGACCAACAT 1 chr10:5853639-5854139 ( 50) CTGAGGTCAGGAGTTCGAGACCAGCCTGGGCAACAT 1 chr1:27959119-27959619 ( 40) CTGAGGTCAGGAGTTCGAGACCAGCCTGGCAAACAT 1 chr16:25055673-25056173 ( 30) CTGAGGTCAGGGGTTCGAGACCAGCCTGGCCAACCT 1 chr18:22184439-22184939 ( 60) TTGAGGACAGGAGTTCGAGACCACCCTGGCCAACAT 1 chr5:181215948-181216448 ( 35) CTGAGGTCAGGCGTTCGAGACCAGCCTGACCAACGT 1 chr3:169763010-169763510 ( 26) CTGAGGTCAGGAGTTCGAGGCCAGCCTGCCCAACTT 1 chr6:27544050-27544550 ( 42) ATGAGGTCAGGAGATCGAGACCATCCTGGCTAACAT 1 chr1:150876802-150877302 ( 43) CTGTGGCCAGGGGTTCGAAACCAGCCTGGCCAACAT 1 chr10:8702990-8703490 ( 14) ACGAGGTGAGGAGTTCGATACTAGCCTGGCCAACAT 1 chr16:75445725-75446225 ( 33) ACAAGGTCAGGAGTTCAAGACCAGCCTGGGCAAGAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 36 n= 39000 bayes= 10.4325 E= 8.3e-110 46 97 -1035 -54 -1035 -84 -1035 191 -154 -1035 174 -1035 204 -1035 -1035 -154 -1035 -1035 186 -1035 -1035 -1035 186 -1035 -154 -184 -1035 191 -1035 174 -184 -1035 215 -1035 -1035 -1035 -1035 -1035 186 -1035 -1035 -1035 186 -1035 178 -184 -84 -1035 -1035 -1035 186 -1035 -154 -1035 -1035 204 -1035 -1035 -1035 215 -1035 186 -1035 -1035 -154 -1035 174 -1035 215 -1035 -1035 -1035 -154 -1035 162 -154 204 -1035 -184 -1035 -1035 186 -1035 -1035 -1035 174 -1035 -154 215 -1035 -1035 -1035 -1035 -184 162 -154 -1035 186 -1035 -1035 -1035 186 -1035 -1035 -1035 -1035 -1035 215 -1035 -1035 186 -1035 -54 -184 148 -1035 -1035 162 -84 -1035 -154 162 -1035 -154 215 -1035 -1035 -1035 215 -1035 -1035 -1035 -1035 174 -184 -1035 178 -184 -184 -154 -1035 -1035 -1035 215 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 36 nsites= 13 E= 8.3e-110 0.307692 0.538462 0.000000 0.153846 0.000000 0.153846 0.000000 0.846154 0.076923 0.000000 0.923077 0.000000 0.923077 0.000000 0.000000 0.076923 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.076923 0.076923 0.000000 0.846154 0.000000 0.923077 0.076923 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.769231 0.076923 0.153846 0.000000 0.000000 0.000000 1.000000 0.000000 0.076923 0.000000 0.000000 0.923077 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.076923 0.000000 0.923077 0.000000 1.000000 0.000000 0.000000 0.000000 0.076923 0.000000 0.846154 0.076923 0.923077 0.000000 0.076923 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.923077 0.000000 0.076923 1.000000 0.000000 0.000000 0.000000 0.000000 0.076923 0.846154 0.076923 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.153846 0.076923 0.769231 0.000000 0.000000 0.846154 0.153846 0.000000 0.076923 0.846154 0.000000 0.076923 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.923077 0.076923 0.000000 0.769231 0.076923 0.076923 0.076923 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT MEME-2 regular expression -------------------------------------------------------------------------------- [CA]TGAGGTCAGGAGTTCGAGACCAGCCTGGCCAACAT -------------------------------------------------------------------------------- Time 672.54 secs. ******************************************************************************** ******************************************************************************** MOTIF AMHAMAAATACAAAAA MEME-3 width = 16 sites = 49 llr = 625 E-value = 9.7e-050 ******************************************************************************** -------------------------------------------------------------------------------- Motif AMHAMAAATACAAAAA MEME-3 Description -------------------------------------------------------------------------------- Simplified A 753859792a3a6978 pos.-specific C 13323:3:2:7:213: probability G :::::11::::::::: matrix T 214:2::16:::2::2 bits 2.2 * 1.9 * * 1.7 * * * 1.5 * * * * * Relative 1.3 * * * * * * * Entropy 1.1 * * * *** *** (18.4 bits) 0.9 * * *** *** *** 0.6 ** ************* 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel AATAAAAATACAAAAA consensus TCCCC C C A C C sequence A T A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMHAMAAATACAAAAA MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr6:27544050-27544550 - 9 4.95e-11 CCCCGTCTCT AATAAAAATACAAAAA AATTAGCC chr10:8702990-8703490 + 67 2.61e-10 ccccgtctct actaaaaatacaaaaa ttagccaggt chr22:37844459-37844959 - 78 2.61e-10 CGTCTCT ACTAAAAATACAAAAA TTAGCTGGGC chr16:75445725-75446225 + 85 2.61e-10 acctatctct actaaaaatacaaaaa chr19:45450372-45450872 + 33 2.61e-10 ccccgtctct actaaaaatacaaaaa ttggtcgtga chr9:13956029-13956529 - 8 9.14e-09 AAAAAGCTAT AAAACAAATACAAACA CCCACTA chr16:25055673-25056173 + 84 1.23e-08 ccccgtctct actaaaaatacaaaat t chr14:21383838-21384338 - 50 1.43e-08 AAACAAAACA AACAAACAAACAAAAA AAAAACCTAA chr1:220527612-220528112 + 23 1.43e-08 caaacaaaca aacaaacaaacaaaAA CAGaaagaaa chr5:181215948-181216448 - 4 1.98e-08 ACCCCATCTT ACCAAAAATACAAAAT TAG chr19:35881941-35882441 + 31 1.98e-08 ataaaaataa aaaataaataaataaa taaataaata chr14:58427248-58427748 + 84 1.98e-08 GTGCTACCTT AAAATAAATAAATAAA T chr17:1258901-1259401 - 24 3.77e-08 ATCCCGTCGC TACCAAAATACAAAAA TTAGCCGGGC chr1:28648527-28649027 - 82 6.52e-08 AAA AAAAAAAACACACACA GAATCTCTTT chr5:160008682-160009182 + 5 1.12e-07 taaa taaataaataaataaa taGTGAAACG chr10:50463978-50464478 + 4 1.12e-07 acc acaataaaaacaaACA Agagattatc chr18:22184439-22184939 - 23 1.80e-07 GTCTCTACTA ACTATACAAAAAAAAA TTAGCCAGGT chr3:169763010-169763510 + 63 2.54e-07 gcccaacttt actgaaaatacaaaaa aatcagccgg chr16:30598283-30598783 + 85 3.21e-07 accctgtctc tacaaaaatactaaaa chr7:99616252-99616752 + 54 3.21e-07 gccttccctg acTacacatacacaca cgcacgcaca chr19:38683956-38684456 - 52 3.96e-07 GGCCTACCCT ACTATAATTACACAAA TGACTCACAT chr19:38243751-38244251 + 9 4.38e-07 aacaaaga aataaaataaaataaa aCCAATTCAC chr1:215581849-215582349 - 77 4.84e-07 TAAATCTC ATACCACATACAAAAA AGTAAACTCC chr10:87878916-87879416 - 14 4.84e-07 CTGCTGTTAA AATACACACACACACA CACACATATA chr1:27959119-27959619 - 7 4.84e-07 CCCCGTCTCT ACTAAAAATACAAATT AGTCGG chr12:106075002-10607550 + 84 6.51e-07 AGTATTAATC Aacacacacacacaca c chr10:665547-666047 + 16 9.54e-07 CGCTTTCCCA AAACAAAACACATCAA TCAAACGAAC chr9:95721070-95721570 + 8 1.14e-06 GGGTTTA TCACTAAATAAATAAA TGTAATCTAC chr1:214520530-214521030 + 46 1.24e-06 AAGTGCCTTG TAAATAAATACAAAAC ATTTCACCAG chr10:101442053-10144255 - 36 1.35e-06 CACACACACA CACACACATACACACA GAGACAGAGA chr5:93582518-93583018 - 61 1.35e-06 GTCACACACA CACACACATACACACA CACACACTTA chr15:66504691-66505191 + 27 1.48e-06 CCTAAGAACC AACACGGATACAAAAA ATATCTCTCT chr5:96083482-96083982 - 34 1.48e-06 ACATGTCAAA AATCTAAAAACATCAA GTCAATTTAT chr16:48366350-48366850 - 25 1.61e-06 GTAGTGCTTG TTTAAAAACAAAACAA GCTACTCTGC chr8:16825859-16826359 + 37 1.91e-06 cacacagaca tacacacacacacaca TTAAAAACCC chr10:12195795-12196295 - 56 2.07e-06 ACGCTTGACA CACACGCATACAAAAA GAGCTTTAGT chr3:156161110-156161610 - 45 2.42e-06 AACCATTGTG AAACAAGAAAAATAAA CATGTGGTAA chr6:2028572-2029072 - 36 2.62e-06 ACTAGCCTCT ATTATGAACACATAAA TCATTTCATA chr5:142024654-142025154 + 15 2.62e-06 ACATCTGATG CCAAAAGAAAAAAAAA GTGAACTTCC chr12:48021658-48022158 + 33 2.82e-06 ATCACAATGG ACCCTAAACAAACACA TTAACAACCA chr12:54052074-54052574 + 73 3.82e-06 ATTTAGTCTA ATAAATAAAACATAAA CAGTTAACTT chr6:143755246-143755746 + 15 4.10e-06 GTGTTTCCCT TATCAACATAATAAAA AGTTCCTGAC chr18:58781624-58782124 - 73 4.40e-06 TACCCCATGC CACACACATACAACAT CACACGCACA chr2:177038712-177039212 + 59 5.06e-06 AAATATTACG ACCACAATAAAACACA TTCTTATCAC chr7:83267080-83267580 - 65 5.06e-06 AAAAAAATGT TTAACAAATAAAACAT TGTAAAACCT chr5:124740935-124741435 - 11 5.42e-06 TTAATACGTG AACAAAATCAAAACAT GCCATAATTC chr12:806374-806874 - 27 8.56e-06 AACTACGTCA TATCAAAATAAACATT GCCTGATGAC chr1:169367868-169368368 - 20 1.63e-05 AACTCAAGTA ACACAGAACACACACT GTAAGGCCTC chr19:36916363-36916863 - 85 1.63e-05 . CTCACACACACAACCA CACACCCACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMHAMAAATACAAAAA MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:27544050-27544550 5e-11 8_[-3]_76 chr10:8702990-8703490 2.6e-10 66_[+3]_18 chr22:37844459-37844959 2.6e-10 77_[-3]_7 chr16:75445725-75446225 2.6e-10 84_[+3] chr19:45450372-45450872 2.6e-10 32_[+3]_52 chr9:13956029-13956529 9.1e-09 7_[-3]_77 chr16:25055673-25056173 1.2e-08 83_[+3]_1 chr14:21383838-21384338 1.4e-08 49_[-3]_35 chr1:220527612-220528112 1.4e-08 22_[+3]_62 chr5:181215948-181216448 2e-08 3_[-3]_81 chr19:35881941-35882441 2e-08 30_[+3]_54 chr14:58427248-58427748 2e-08 83_[+3]_1 chr17:1258901-1259401 3.8e-08 23_[-3]_61 chr1:28648527-28649027 6.5e-08 81_[-3]_3 chr5:160008682-160009182 1.1e-07 4_[+3]_80 chr10:50463978-50464478 1.1e-07 3_[+3]_81 chr18:22184439-22184939 1.8e-07 22_[-3]_62 chr3:169763010-169763510 2.5e-07 62_[+3]_22 chr16:30598283-30598783 3.2e-07 84_[+3] chr7:99616252-99616752 3.2e-07 53_[+3]_31 chr19:38683956-38684456 4e-07 51_[-3]_33 chr19:38243751-38244251 4.4e-07 8_[+3]_76 chr1:215581849-215582349 4.8e-07 76_[-3]_8 chr10:87878916-87879416 4.8e-07 13_[-3]_71 chr1:27959119-27959619 4.8e-07 6_[-3]_78 chr12:106075002-10607550 6.5e-07 83_[+3]_1 chr10:665547-666047 9.5e-07 15_[+3]_69 chr9:95721070-95721570 1.1e-06 7_[+3]_77 chr1:214520530-214521030 1.2e-06 45_[+3]_39 chr10:101442053-10144255 1.4e-06 35_[-3]_49 chr5:93582518-93583018 1.4e-06 60_[-3]_24 chr15:66504691-66505191 1.5e-06 26_[+3]_58 chr5:96083482-96083982 1.5e-06 33_[-3]_51 chr16:48366350-48366850 1.6e-06 24_[-3]_60 chr8:16825859-16826359 1.9e-06 36_[+3]_48 chr10:12195795-12196295 2.1e-06 55_[-3]_29 chr3:156161110-156161610 2.4e-06 44_[-3]_40 chr6:2028572-2029072 2.6e-06 35_[-3]_49 chr5:142024654-142025154 2.6e-06 14_[+3]_70 chr12:48021658-48022158 2.8e-06 32_[+3]_52 chr12:54052074-54052574 3.8e-06 72_[+3]_12 chr6:143755246-143755746 4.1e-06 14_[+3]_70 chr18:58781624-58782124 4.4e-06 72_[-3]_12 chr2:177038712-177039212 5.1e-06 58_[+3]_26 chr7:83267080-83267580 5.1e-06 64_[-3]_20 chr5:124740935-124741435 5.4e-06 10_[-3]_74 chr12:806374-806874 8.6e-06 26_[-3]_58 chr1:169367868-169368368 1.6e-05 19_[-3]_65 chr19:36916363-36916863 1.6e-05 84_[-3] -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMHAMAAATACAAAAA MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AMHAMAAATACAAAAA width=16 seqs=49 chr6:27544050-27544550 ( 9) AATAAAAATACAAAAA 1 chr10:8702990-8703490 ( 67) ACTAAAAATACAAAAA 1 chr22:37844459-37844959 ( 78) ACTAAAAATACAAAAA 1 chr16:75445725-75446225 ( 85) ACTAAAAATACAAAAA 1 chr19:45450372-45450872 ( 33) ACTAAAAATACAAAAA 1 chr9:13956029-13956529 ( 8) AAAACAAATACAAACA 1 chr16:25055673-25056173 ( 84) ACTAAAAATACAAAAT 1 chr14:21383838-21384338 ( 50) AACAAACAAACAAAAA 1 chr1:220527612-220528112 ( 23) AACAAACAAACAAAAA 1 chr5:181215948-181216448 ( 4) ACCAAAAATACAAAAT 1 chr19:35881941-35882441 ( 31) AAAATAAATAAATAAA 1 chr14:58427248-58427748 ( 84) AAAATAAATAAATAAA 1 chr17:1258901-1259401 ( 24) TACCAAAATACAAAAA 1 chr1:28648527-28649027 ( 82) AAAAAAAACACACACA 1 chr5:160008682-160009182 ( 5) TAAATAAATAAATAAA 1 chr10:50463978-50464478 ( 4) ACAATAAAAACAAACA 1 chr18:22184439-22184939 ( 23) ACTATACAAAAAAAAA 1 chr3:169763010-169763510 ( 63) ACTGAAAATACAAAAA 1 chr16:30598283-30598783 ( 85) TACAAAAATACTAAAA 1 chr7:99616252-99616752 ( 54) ACTACACATACACACA 1 chr19:38683956-38684456 ( 52) ACTATAATTACACAAA 1 chr19:38243751-38244251 ( 9) AATAAAATAAAATAAA 1 chr1:215581849-215582349 ( 77) ATACCACATACAAAAA 1 chr10:87878916-87879416 ( 14) AATACACACACACACA 1 chr1:27959119-27959619 ( 7) ACTAAAAATACAAATT 1 chr12:106075002-10607550 ( 84) AACACACACACACACA 1 chr10:665547-666047 ( 16) AAACAAAACACATCAA 1 chr9:95721070-95721570 ( 8) TCACTAAATAAATAAA 1 chr1:214520530-214521030 ( 46) TAAATAAATACAAAAC 1 chr10:101442053-10144255 ( 36) CACACACATACACACA 1 chr5:93582518-93583018 ( 61) CACACACATACACACA 1 chr15:66504691-66505191 ( 27) AACACGGATACAAAAA 1 chr5:96083482-96083982 ( 34) AATCTAAAAACATCAA 1 chr16:48366350-48366850 ( 25) TTTAAAAACAAAACAA 1 chr8:16825859-16826359 ( 37) TACACACACACACACA 1 chr10:12195795-12196295 ( 56) CACACGCATACAAAAA 1 chr3:156161110-156161610 ( 45) AAACAAGAAAAATAAA 1 chr6:2028572-2029072 ( 36) ATTATGAACACATAAA 1 chr5:142024654-142025154 ( 15) CCAAAAGAAAAAAAAA 1 chr12:48021658-48022158 ( 33) ACCCTAAACAAACACA 1 chr12:54052074-54052574 ( 73) ATAAATAAAACATAAA 1 chr6:143755246-143755746 ( 15) TATCAACATAATAAAA 1 chr18:58781624-58782124 ( 73) CACACACATACAACAT 1 chr2:177038712-177039212 ( 59) ACCACAATAAAACACA 1 chr7:83267080-83267580 ( 65) TTAACAAATAAAACAT 1 chr5:124740935-124741435 ( 11) AACAAAATCAAAACAT 1 chr12:806374-806874 ( 27) TATCAAAATAAACATT 1 chr1:169367868-169368368 ( 20) ACACAGAACACACACT 1 chr19:36916363-36916863 ( 85) CTCACACACACAACCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMHAMAAATACAAAAA MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 12.1269 E= 9.7e-050 159 -117 -1226 -14 124 33 -1226 -87 45 24 -1226 71 179 -43 -375 -1226 113 5 -1226 0 200 -1226 -175 -346 154 5 -217 -1226 203 -1226 -1226 -146 -14 -30 -1226 135 216 -1226 -1226 -1226 45 133 -1226 -1226 210 -1226 -1226 -246 130 -17 -1226 -14 193 -95 -1226 -1226 163 -5 -1226 -246 186 -375 -1226 -46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMHAMAAATACAAAAA MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 49 E= 9.7e-050 0.673469 0.122449 0.000000 0.204082 0.530612 0.346939 0.000000 0.122449 0.306122 0.326531 0.000000 0.367347 0.775510 0.204082 0.020408 0.000000 0.489796 0.285714 0.000000 0.224490 0.897959 0.000000 0.081633 0.020408 0.653061 0.285714 0.061224 0.000000 0.918367 0.000000 0.000000 0.081633 0.204082 0.224490 0.000000 0.571429 1.000000 0.000000 0.000000 0.000000 0.306122 0.693878 0.000000 0.000000 0.959184 0.000000 0.000000 0.040816 0.551020 0.244898 0.000000 0.204082 0.857143 0.142857 0.000000 0.000000 0.693878 0.265306 0.000000 0.040816 0.816327 0.020408 0.000000 0.163265 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AMHAMAAATACAAAAA MEME-3 regular expression -------------------------------------------------------------------------------- [AT][AC][TCA][AC][ACT]A[AC]A[TCA]A[CA]A[ACT]A[AC]A -------------------------------------------------------------------------------- Time 964.56 secs. ******************************************************************************** ******************************************************************************** MOTIF RRACTACAWHTCCCAGVADGCCMBGS MEME-4 width = 26 sites = 28 llr = 505 E-value = 1.6e-056 ******************************************************************************** -------------------------------------------------------------------------------- Motif RRACTACAWHTCCCAGVADGCCMBGS MEME-4 Description -------------------------------------------------------------------------------- Simplified A 35a::9:8531:1:813921134:3: pos.-specific C :::a1:a:13:a9a::3:11963415 probability G 65:::::211::::173135::1364 matrix T 1:::9:::339:::111:42:223:1 bits 2.2 * 1.9 ** * 1.7 ***** * * 1.5 ****** ** * * Relative 1.3 ****** ***** * Entropy 1.1 ****** ***** * * (26.0 bits) 0.9 ******* ***** * * 0.6 ******** ****** * ** * 0.4 ********* ****** * ** ** 0.2 **************** ********* 0.0 -------------------------- Multilevel GGACTACAAATCCCAGAATGCCACGC consensus AA TC G GT ACTAG sequence T C A G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTACAWHTCCCAGVADGCCMBGS MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------- chr19:44071882-44072382 - 1 2.26e-12 CGCAGCGTGT GAACTACATTTCCCAGAATTCCCCGG chr19:48644710-48645210 + 15 3.90e-12 ACTGTAGATG GAACTACAACTCCCAGCAGGCCCCAG TGCTACCAGC chr19:19776285-19776785 + 21 8.99e-12 AGCAGTAAAG AGACTACAACTCCCAGCATACCAGGC GCGGCGCGCA chr19:44113076-44113576 - 33 1.23e-11 CCGAGCGTCT GGACTACACTTCCCAGAATTCCCTGG GATCCACCTG chr19:35748176-35748676 + 10 5.86e-11 GGGAAGCTG GAACTACACCTCCCAGGAAGCTAGGG GGTAGATGGT chr7:5822859-5823359 - 65 1.80e-10 GCTCCCCCAG GGACTACAACTCCCAGAACCCCCCAC GACGCCATGC chr7:77122175-77122675 + 54 1.80e-10 CGCCTCTTAG AAACCACATATCCCAGGAGGCAATGC GCAGGGGAGC chr7:102748618-102749118 - 63 2.02e-10 TGCCTCTTAG AAACCACATTTCCCAGGAGGCAATGC GCAGGGGAGC chr14:80941611-80942111 + 45 2.55e-10 TCCCGAAAAG GAACTGCAAATCCCAGGATGCCATAT AGCTGGCCTT chr1:45499908-45500408 + 67 6.13e-10 AGGAGGAAAC GAACTACGCATCCCAAGATGCATCGC GCATAGGC chr7:93232066-93232566 + 41 7.56e-10 GGCGTCCAGA AGACTACAGTTCCCAGCAGGCCCAGG GAAAGACAGG chr19:44164671-44165171 - 11 7.56e-10 ACGGAACTCC GGACTACATATCACAGAATGCTGGAG TTGGGGGAAA chr10:102132686-10213318 - 62 7.56e-10 TGACACTGCA AGACTACGAATCCCAGAGAGCCGTGC GGCGAGACCC chr19:46850667-46851167 - 26 8.37e-10 CCCTTTGGTG AAACTACAACTCCCAGGGGTCTGTGC GCGAGAAGGC chr14:44961891-44962391 + 6 9.27e-10 GACGT GGACTACATAACCCAGCATTCATCAC GGCAAGTGGA chr1:36224038-36224538 - 62 9.27e-10 GCTGCCATCA GAACTACGTTTCCCAAAAGACAAGGC GAGCGTTGGG chr2:75646495-75646995 - 69 1.52e-09 ACGTCA AGACTACAGCTCCCAGTAATCAGTGC GACGAGGTTG chr16:2047673-2048173 + 43 2.23e-09 GGGCGGCACA GAACTACAACTCCCAGCAAGCTCCCA AGGCGGCCCT chr19:36214708-36215208 - 53 2.68e-09 CTCAGGCCTT GGACTACATTTCCCTTGAGGCTTTAC TGGTCGACTC chr9:94259007-94259507 - 52 2.94e-09 CCTGGGCACG GAACTACACTACCCAGACTGCCACGG GGCGCGCAAC chr1:230978766-230979266 + 36 5.95e-09 GCCGGTGCCG GGACTACGAATCCCAATAAGCCCGCG CGGCGCAAGT chr5:146182503-146183003 + 28 9.80e-09 AGGCGCTAAC TGACTACAATTCCCAGAGAAAAACGG GTTATCGGAA chr11:61792430-61792930 - 27 3.09e-08 CGAAATCGCA GGACTACAAGTCCCTCAATGCCACTT GCGCCGGAGG chr19:16495951-16496451 + 56 5.80e-08 GCGCGTCCCG AAACTACAACTCCCGTCACAACTCGC GATTATGACC chr14:61331985-61332485 + 7 6.63e-08 TGACAA ATACTACAAATCACTGTAGGACAGAC ATTTTAATTA chr16:11915835-11916335 + 72 1.92e-07 GCGGGAGGTG GAACTACAAGTTCCGGCAGCGCCCGC GCT chr12:53727423-53727923 + 61 2.04e-07 GGCCAGCAAA GGACTTCAAGGCCCATGATCCCTTAG GAGGGGGCCG chr6:26537260-26537760 + 66 5.48e-07 ataacgcgtc tgactacggatcagaagattccaggt tcgactcct -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTACAWHTCCCAGVADGCCMBGS MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:44071882-44072382 2.3e-12 [-4]_74 chr19:48644710-48645210 3.9e-12 14_[+4]_60 chr19:19776285-19776785 9e-12 20_[+4]_54 chr19:44113076-44113576 1.2e-11 32_[-4]_42 chr19:35748176-35748676 5.9e-11 9_[+4]_65 chr7:5822859-5823359 1.8e-10 64_[-4]_10 chr7:77122175-77122675 1.8e-10 53_[+4]_21 chr7:102748618-102749118 2e-10 62_[-4]_12 chr14:80941611-80942111 2.5e-10 44_[+4]_30 chr1:45499908-45500408 6.1e-10 66_[+4]_8 chr7:93232066-93232566 7.6e-10 40_[+4]_34 chr19:44164671-44165171 7.6e-10 10_[-4]_64 chr10:102132686-10213318 7.6e-10 61_[-4]_13 chr19:46850667-46851167 8.4e-10 25_[-4]_49 chr14:44961891-44962391 9.3e-10 5_[+4]_69 chr1:36224038-36224538 9.3e-10 61_[-4]_13 chr2:75646495-75646995 1.5e-09 68_[-4]_6 chr16:2047673-2048173 2.2e-09 42_[+4]_32 chr19:36214708-36215208 2.7e-09 52_[-4]_22 chr9:94259007-94259507 2.9e-09 51_[-4]_23 chr1:230978766-230979266 5.9e-09 35_[+4]_39 chr5:146182503-146183003 9.8e-09 27_[+4]_47 chr11:61792430-61792930 3.1e-08 26_[-4]_48 chr19:16495951-16496451 5.8e-08 55_[+4]_19 chr14:61331985-61332485 6.6e-08 6_[+4]_68 chr16:11915835-11916335 1.9e-07 71_[+4]_3 chr12:53727423-53727923 2e-07 60_[+4]_14 chr6:26537260-26537760 5.5e-07 65_[+4]_9 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTACAWHTCCCAGVADGCCMBGS MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RRACTACAWHTCCCAGVADGCCMBGS width=26 seqs=28 chr19:44071882-44072382 ( 1) GAACTACATTTCCCAGAATTCCCCGG 1 chr19:48644710-48645210 ( 15) GAACTACAACTCCCAGCAGGCCCCAG 1 chr19:19776285-19776785 ( 21) AGACTACAACTCCCAGCATACCAGGC 1 chr19:44113076-44113576 ( 33) GGACTACACTTCCCAGAATTCCCTGG 1 chr19:35748176-35748676 ( 10) GAACTACACCTCCCAGGAAGCTAGGG 1 chr7:5822859-5823359 ( 65) GGACTACAACTCCCAGAACCCCCCAC 1 chr7:77122175-77122675 ( 54) AAACCACATATCCCAGGAGGCAATGC 1 chr7:102748618-102749118 ( 63) AAACCACATTTCCCAGGAGGCAATGC 1 chr14:80941611-80942111 ( 45) GAACTGCAAATCCCAGGATGCCATAT 1 chr1:45499908-45500408 ( 67) GAACTACGCATCCCAAGATGCATCGC 1 chr7:93232066-93232566 ( 41) AGACTACAGTTCCCAGCAGGCCCAGG 1 chr19:44164671-44165171 ( 11) GGACTACATATCACAGAATGCTGGAG 1 chr10:102132686-10213318 ( 62) AGACTACGAATCCCAGAGAGCCGTGC 1 chr19:46850667-46851167 ( 26) AAACTACAACTCCCAGGGGTCTGTGC 1 chr14:44961891-44962391 ( 6) GGACTACATAACCCAGCATTCATCAC 1 chr1:36224038-36224538 ( 62) GAACTACGTTTCCCAAAAGACAAGGC 1 chr2:75646495-75646995 ( 69) AGACTACAGCTCCCAGTAATCAGTGC 1 chr16:2047673-2048173 ( 43) GAACTACAACTCCCAGCAAGCTCCCA 1 chr19:36214708-36215208 ( 53) GGACTACATTTCCCTTGAGGCTTTAC 1 chr9:94259007-94259507 ( 52) GAACTACACTACCCAGACTGCCACGG 1 chr1:230978766-230979266 ( 36) GGACTACGAATCCCAATAAGCCCGCG 1 chr5:146182503-146183003 ( 28) TGACTACAATTCCCAGAGAAAAACGG 1 chr11:61792430-61792930 ( 27) GGACTACAAGTCCCTCAATGCCACTT 1 chr19:16495951-16496451 ( 56) AAACTACAACTCCCGTCACAACTCGC 1 chr14:61331985-61332485 ( 7) ATACTACAAATCACTGTAGGACAGAC 1 chr16:11915835-11916335 ( 72) GAACTACAAGTTCCGGCAGCGCCCGC 1 chr12:53727423-53727923 ( 61) GGACTTCAAGGCCCATGATCCCTTAG 1 chr6:26537260-26537760 ( 66) TGACTACGGATCAGAAGATTCCAGGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTACAWHTCCCAGVADGCCMBGS MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 26 n= 45000 bayes= 10.4932 E= 1.6e-056 52 -1145 114 -165 105 -1145 86 -265 216 -1145 -1145 -1145 -1145 186 -1145 -1145 -1145 -195 -1145 205 205 -1145 -294 -265 -1145 186 -1145 -1145 187 -1145 -63 -1145 116 -95 -136 16 52 5 -136 35 -165 -1145 -294 199 -1145 181 -1145 -265 -107 170 -1145 -1145 -1145 181 -294 -1145 187 -1145 -195 -107 -65 -294 137 -107 52 -14 22 -107 193 -294 -136 -1145 -7 -195 22 81 -65 -136 96 -7 -107 164 -294 -1145 16 105 -1145 -33 81 5 -95 -33 -265 51 -14 52 35 -195 114 -265 -265 86 37 -107 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTACAWHTCCCAGVADGCCMBGS MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 26 nsites= 28 E= 1.6e-056 0.321429 0.000000 0.607143 0.071429 0.464286 0.000000 0.500000 0.035714 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.071429 0.000000 0.928571 0.928571 0.000000 0.035714 0.035714 0.000000 1.000000 0.000000 0.000000 0.821429 0.000000 0.178571 0.000000 0.500000 0.142857 0.107143 0.250000 0.321429 0.285714 0.107143 0.285714 0.071429 0.000000 0.035714 0.892857 0.000000 0.964286 0.000000 0.035714 0.107143 0.892857 0.000000 0.000000 0.000000 0.964286 0.035714 0.000000 0.821429 0.000000 0.071429 0.107143 0.142857 0.035714 0.714286 0.107143 0.321429 0.250000 0.321429 0.107143 0.857143 0.035714 0.107143 0.000000 0.214286 0.071429 0.321429 0.392857 0.142857 0.107143 0.535714 0.214286 0.107143 0.857143 0.035714 0.000000 0.250000 0.571429 0.000000 0.178571 0.392857 0.285714 0.142857 0.178571 0.035714 0.392857 0.250000 0.321429 0.285714 0.071429 0.607143 0.035714 0.035714 0.500000 0.357143 0.107143 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RRACTACAWHTCCCAGVADGCCMBGS MEME-4 regular expression -------------------------------------------------------------------------------- [GA][GA]ACTACA[AT][ACT]TCCCAG[AGC]A[TGA][GT]C[CA][AC][CTG][GA][CG] -------------------------------------------------------------------------------- Time 1248.30 secs. ******************************************************************************** ******************************************************************************** MOTIF ATCCRCCCGCCTCGGCCTCCCA MEME-5 width = 22 sites = 14 llr = 341 E-value = 8.5e-048 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATCCRCCCGCCTCGGCCTCCCA MEME-5 Description -------------------------------------------------------------------------------- Simplified A a:::4:::3::::1:::::::9 pos.-specific C ::99:9a8:a9:7::aa:aa9: probability G ::::51::7:::18a::::::1 matrix T :a1111:2::1a21:::a::1: bits 2.2 ** * * 1.9 ** * * * ****** 1.7 ** * * * ****** * 1.5 *** * *** ******** Relative 1.3 **** * *** ******** Entropy 1.1 **** ******* ********* (35.2 bits) 0.9 **** ***************** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel ATCCGCCCGCCTCGGCCTCCCA consensus A TA T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCRCCCGCCTCGGCCTCCCA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr16:75445725-75446225 - 10 3.20e-13 TGACCTTGTG ATCCACCCGCCTCGGCCTCCCA AAGTGCTGG chr1:161764895-161765395 + 25 3.20e-13 tgacctcgtg atccgcccgcctcggcctccca aagtgctggg chr16:25055673-25056173 - 5 3.20e-13 ACCTCAGGTG ATCCACCCGCCTCGGCCTCCCA AAGT chr5:181215948-181216448 + 74 5.79e-13 acctcaggtg atccacccacctcggcctccca aagtg chr1:146039400-146039900 - 56 5.79e-13 ACCTCAGGTG ATCCGCCCACCTCGGCCTCCCA AAGTACTGGG chr10:23420805-23421305 + 48 1.10e-12 tgacctcatg atccacctgcctcggcctccca aagtgctggg chr1:27959119-27959619 + 79 4.43e-12 acctcaggtg atccgcccgcctgggcctccca chr1:150876802-150877302 - 18 5.08e-12 GCCACAGGTG ATCCGGCCGCCTCGGCCTCCCA AAGTGCTGGG chr6:27544050-27544550 + 79 5.08e-12 tgacctcatg atccacccgccttagcctccca chr10:5853639-5854139 - 25 9.67e-12 ACCTCAGGTG ATCTACCCACCTTGGCCTCCCA AAGTGCTCGG chr16:30598283-30598783 - 8 1.35e-11 ACCTCAGGTG ATCTGCCTGCCTTGGCCTCCCA AAGTGCT chr3:169763010-169763510 - 1 2.54e-11 ACCTCAGGTG ATCCGCCCGCTTCTGCCTCCCA chr18:49460605-49461105 - 66 4.39e-11 TGACCTCGTG ATCCGTCCACCTCGGCCTCCTA AAGTGCTGGG chr22:37844459-37844959 + 15 3.19e-10 ccttgaagca attctcctgcctcagcctcccg agtagctggg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCRCCCGCCTCGGCCTCCCA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:75445725-75446225 3.2e-13 9_[-5]_69 chr1:161764895-161765395 3.2e-13 24_[+5]_54 chr16:25055673-25056173 3.2e-13 4_[-5]_74 chr5:181215948-181216448 5.8e-13 73_[+5]_5 chr1:146039400-146039900 5.8e-13 55_[-5]_23 chr10:23420805-23421305 1.1e-12 47_[+5]_31 chr1:27959119-27959619 4.4e-12 78_[+5] chr1:150876802-150877302 5.1e-12 17_[-5]_61 chr6:27544050-27544550 5.1e-12 78_[+5] chr10:5853639-5854139 9.7e-12 24_[-5]_54 chr16:30598283-30598783 1.4e-11 7_[-5]_71 chr3:169763010-169763510 2.5e-11 [-5]_78 chr18:49460605-49461105 4.4e-11 65_[-5]_13 chr22:37844459-37844959 3.2e-10 14_[+5]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCRCCCGCCTCGGCCTCCCA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATCCRCCCGCCTCGGCCTCCCA width=22 seqs=14 chr16:75445725-75446225 ( 10) ATCCACCCGCCTCGGCCTCCCA 1 chr1:161764895-161765395 ( 25) ATCCGCCCGCCTCGGCCTCCCA 1 chr16:25055673-25056173 ( 5) ATCCACCCGCCTCGGCCTCCCA 1 chr5:181215948-181216448 ( 74) ATCCACCCACCTCGGCCTCCCA 1 chr1:146039400-146039900 ( 56) ATCCGCCCACCTCGGCCTCCCA 1 chr10:23420805-23421305 ( 48) ATCCACCTGCCTCGGCCTCCCA 1 chr1:27959119-27959619 ( 79) ATCCGCCCGCCTGGGCCTCCCA 1 chr1:150876802-150877302 ( 18) ATCCGGCCGCCTCGGCCTCCCA 1 chr6:27544050-27544550 ( 79) ATCCACCCGCCTTAGCCTCCCA 1 chr10:5853639-5854139 ( 25) ATCTACCCACCTTGGCCTCCCA 1 chr16:30598283-30598783 ( 8) ATCTGCCTGCCTTGGCCTCCCA 1 chr3:169763010-169763510 ( 1) ATCCGCCCGCTTCTGCCTCCCA 1 chr18:49460605-49461105 ( 66) ATCCGTCCACCTCGGCCTCCTA 1 chr22:37844459-37844959 ( 15) ATTCTCCTGCCTCAGCCTCCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCRCCCGCCTCGGCCTCCCA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 10.7039 E= 8.5e-048 216 -1045 -1045 -1045 -1045 -1045 -1045 216 -1045 175 -1045 -165 -1045 164 -1045 -65 93 -1045 86 -165 -1045 164 -195 -165 -1045 186 -1045 -1045 -1045 151 -1045 -7 35 -1045 137 -1045 -1045 186 -1045 -1045 -1045 175 -1045 -165 -1045 -1045 -1045 216 -1045 137 -195 -7 -65 -1045 151 -165 -1045 -1045 186 -1045 -1045 186 -1045 -1045 -1045 186 -1045 -1045 -1045 -1045 -1045 216 -1045 186 -1045 -1045 -1045 186 -1045 -1045 -1045 175 -1045 -165 205 -1045 -195 -1045 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCRCCCGCCTCGGCCTCCCA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 14 E= 8.5e-048 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.928571 0.000000 0.071429 0.000000 0.857143 0.000000 0.142857 0.428571 0.000000 0.500000 0.071429 0.000000 0.857143 0.071429 0.071429 0.000000 1.000000 0.000000 0.000000 0.000000 0.785714 0.000000 0.214286 0.285714 0.000000 0.714286 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.928571 0.000000 0.071429 0.000000 0.000000 0.000000 1.000000 0.000000 0.714286 0.071429 0.214286 0.142857 0.000000 0.785714 0.071429 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.928571 0.000000 0.071429 0.928571 0.000000 0.071429 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATCCRCCCGCCTCGGCCTCCCA MEME-5 regular expression -------------------------------------------------------------------------------- ATCC[GA]CC[CT][GA]CCT[CT]GGCCTCCCA -------------------------------------------------------------------------------- Time 1527.84 secs. ******************************************************************************** ******************************************************************************** MOTIF CTGGGATTACAGGCGTGAGCCACCGC MEME-6 width = 26 sites = 7 llr = 212 E-value = 1.3e-019 ******************************************************************************** -------------------------------------------------------------------------------- Motif CTGGGATTACAGGCGTGAGCCACCGC MEME-6 Description -------------------------------------------------------------------------------- Simplified A :::::9::a:9::::::71::a::3: pos.-specific C 9::::11::a:::9:3:3:aa:99:a probability G ::aaa:::::1aa:a:a:9:::::7: matrix T 1a::::9a:::::1:7::::::11:: bits 2.2 * ** * 1.9 **** *** ** * * *** * 1.7 **** *** ** * * *** * 1.5 ************ * * *** * Relative 1.3 ************************ * Entropy 1.1 ************************** (43.7 bits) 0.9 ************************** 0.6 ************************** 0.4 ************************** 0.2 ************************** 0.0 -------------------------- Multilevel CTGGGATTACAGGCGTGAGCCACCGC consensus C C A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGATTACAGGCGTGAGCCACCGC MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------- chr18:49460605-49461105 - 35 4.44e-16 TCCTAAAGTG CTGGGATTACAGGCGTGAGCCACCGC GCACGGCTGT chr1:146039400-146039900 - 25 4.44e-16 TCCCAAAGTA CTGGGATTACAGGCGTGAGCCACCGC GCCCGGCCCA chr1:161764895-161765395 + 52 4.44e-16 tcccaaagtg ctgggattacaggcgtgagccaccgc gcccggccTT chr19:44259548-44260048 + 16 3.70e-15 tcccaaagtg ctgggattacaggcgtgagccactgc acctggccCC chr10:23420805-23421305 + 75 4.24e-14 tcccaaagtg ctgggcttacgggcgtgagccaccgc chr22:37844459-37844959 + 42 8.22e-14 tcccgagtag ctgggactacaggcgcgcgccaccac gcccagctaa chr19:45450372-45450872 - 55 7.36e-13 TCCACAGTAG TTGGGATTACAGGTGCGCACCATCAC GACCAATTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGATTACAGGCGTGAGCCACCGC MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:49460605-49461105 4.4e-16 34_[-6]_40 chr1:146039400-146039900 4.4e-16 24_[-6]_50 chr1:161764895-161765395 4.4e-16 51_[+6]_23 chr19:44259548-44260048 3.7e-15 15_[+6]_59 chr10:23420805-23421305 4.2e-14 74_[+6] chr22:37844459-37844959 8.2e-14 41_[+6]_33 chr19:45450372-45450872 7.4e-13 54_[-6]_20 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGATTACAGGCGTGAGCCACCGC MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CTGGGATTACAGGCGTGAGCCACCGC width=26 seqs=7 chr18:49460605-49461105 ( 35) CTGGGATTACAGGCGTGAGCCACCGC 1 chr1:146039400-146039900 ( 25) CTGGGATTACAGGCGTGAGCCACCGC 1 chr1:161764895-161765395 ( 52) CTGGGATTACAGGCGTGAGCCACCGC 1 chr19:44259548-44260048 ( 16) CTGGGATTACAGGCGTGAGCCACTGC 1 chr10:23420805-23421305 ( 75) CTGGGCTTACGGGCGTGAGCCACCGC 1 chr22:37844459-37844959 ( 42) CTGGGACTACAGGCGCGCGCCACCAC 1 chr19:45450372-45450872 ( 55) TTGGGATTACAGGTGCGCACCATCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGATTACAGGCGTGAGCCACCGC MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 26 n= 45000 bayes= 13.2559 E= 1.3e-019 -945 164 -945 -65 -945 -945 -945 215 -945 -945 186 -945 -945 -945 186 -945 -945 -945 186 -945 193 -95 -945 -945 -945 -95 -945 193 -945 -945 -945 215 215 -945 -945 -945 -945 186 -945 -945 193 -945 -95 -945 -945 -945 186 -945 -945 -945 186 -945 -945 164 -945 -65 -945 -945 186 -945 -945 5 -945 167 -945 -945 186 -945 167 5 -945 -945 -65 -945 164 -945 -945 186 -945 -945 -945 186 -945 -945 215 -945 -945 -945 -945 164 -945 -65 -945 164 -945 -65 35 -945 137 -945 -945 186 -945 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGATTACAGGCGTGAGCCACCGC MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 26 nsites= 7 E= 1.3e-019 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.857143 0.142857 0.000000 0.000000 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 1.000000 0.000000 0.000000 0.285714 0.000000 0.714286 0.000000 0.000000 1.000000 0.000000 0.714286 0.285714 0.000000 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.857143 0.000000 0.142857 0.285714 0.000000 0.714286 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CTGGGATTACAGGCGTGAGCCACCGC MEME-6 regular expression -------------------------------------------------------------------------------- CTGGGATTACAGGCG[TC]G[AC]GCCACC[GA]C -------------------------------------------------------------------------------- Time 1810.60 secs. ******************************************************************************** ******************************************************************************** MOTIF MTCYYTCCCTYCCTCY MEME-7 width = 16 sites = 77 llr = 752 E-value = 3.4e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif MTCYYTCCCTYCCTCY MEME-7 Description -------------------------------------------------------------------------------- Simplified A 3:211211:11::1:1 pos.-specific C 62653297a157a295 probability G :2::1::2:211::1: matrix T 262446:1:732:7:4 bits 2.2 1.9 * 1.7 * * 1.5 * * * Relative 1.3 * * * * Entropy 1.1 * * * * (14.1 bits) 0.9 * * **** 0.6 **** ** ** ***** 0.4 **** ***** ***** 0.2 **************** 0.0 ---------------- Multilevel CTCCTTCCCTCCCTCC consensus ACTTCA TT T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTCYYTCCCTYCCTCY MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr11:93783967-93784467 + 2 5.87e-10 G CTCTTTCCCTCCCTCT GCCGGCCACG chr5:53478397-53478897 - 25 1.31e-09 CCCCTCTTCT CTCCTTCCCTCCCTCT ACCCAGACTC chr1:234723902-234724402 - 36 3.73e-08 TCCCTCCTCC CTTCCTCCCTCCCTCT CCCTCCATTT chr5:37371026-37371526 - 61 1.68e-07 ATCCTTCCCT TCCTTTCCCTCCCTCC CTTCCCTAAA chr22:39520174-39520674 - 68 1.98e-07 TCCCGCCCGC TCCCTTCCCTCCCTCC CTTTGACGCC chr16:3003772-3004272 - 4 2.37e-07 CCGCCAAGTT CTTCTTCCCGCCCTCT CCT chr1:40257882-40258382 - 48 3.94e-07 CGATACCCGC CCCCATCCCTCCCTCT GCGCGCTGCT chr10:101442053-10144255 + 11 4.66e-07 GAATTAGAAt ctctctctctctctct ctctgtctct chr12:50111901-50112401 - 12 5.47e-07 CAGAAAGCAA CTTTCTCCCTCCCACC TGCCGGGTTA chr19:36214708-36215208 - 22 8.53e-07 GACTCTCTGT CTCCTCCCCTCCCCCC GCGAACTTGG chr16:1308127-1308627 - 67 1.12e-06 CCCTCCCTCA CTCATTCCCTCCCTCA CTCATTCATT chr12:54359085-54359585 - 73 1.28e-06 CACGCTCTCT CTCTTTCGCTGTCTCT TACAGGCAGA chr17:46922816-46923316 + 4 1.28e-06 TTT CTCCTTCCCCTTCTCC GATCTCGCAA chr1:150926120-150926620 + 66 1.93e-06 ccccttccct ctttcacgcttcctcc cctccccctc chr12:89525902-89526402 - 4 2.20e-06 GACCCGGCGC ATACCTCCCGTCCTCT CTT chr1:179882537-179883037 - 53 2.52e-06 AGTACGCGCT TTCTCTCACTTCCTCT TTCGCAGAAT chr17:81253449-81253949 + 22 2.86e-06 tcaccatcat ctccatccctaccacc aacatcacca chr8:22604441-22604941 - 33 2.86e-06 GTCTCCGCCG ACCTCTCCCTTCCCCC ACGCCGGCTT chr1:66924920-66925420 + 61 3.66e-06 TCCCCTTTCT CTCCTTCCCCTCCCCC ACGGCAGTGT chr19:19776285-19776785 + 60 3.66e-06 GCGCGCACCG CCCTGCCCCTTCCTCT GGGGTTGCGA chr19:36666555-36667055 + 30 4.14e-06 GGCCCGGGAC ATCCTTACCTGCCTCT ACCCGGAGAC chrX:54182128-54182628 - 75 4.65e-06 ACCCACTTAC CCACTACCCTACCTCC CATCTACCCA chr10:102152023-10215252 + 23 4.65e-06 ATAGATTTCC CGTCTACCCTACCTCT GAGGTGAAGG chr14:36835046-36835546 + 74 4.65e-06 ACATTAACAA ATTACTCCCTCTCTCT GCCCACATTT chr10:97401107-97401607 + 12 5.21e-06 GATACCCTGT AGCCTTCACTTCCTCT TCTTCTGGCG chr17:51153278-51153778 - 24 5.21e-06 GAACACCGCT CGCCCACGCTTCCTCT TGGGAGTAGG chr2:43995842-43996342 - 17 5.83e-06 ACCTAAAACA ATCCGTCGCTCCCCCC ACATTTGGCA chr7:103344608-103345108 + 1 6.53e-06 . CTCACACCCTCCCACC CCCGCCAACG chr17:58417458-58417958 + 54 6.53e-06 ACCAGACCCG TTCTTTCGCTCTCCCC CCTCCCTCAG chr7:102748618-102749118 + 42 8.14e-06 AACACCTACC CTCTTACCCGTGCTCC CCTGCGCATT chr7:77122175-77122675 - 85 8.14e-06 . CTCTTACCCGTGCTCC CCTGCGCATT chr1:109984491-109984991 + 4 8.14e-06 GCC CTTTCTCCCCGCCTCT TCCCCCTCCC chr4:82373861-82374361 + 50 9.07e-06 TCTCGCTACC CTTTATACCTTCCTCT CACGCTCCGC chr5:176388748-176389248 - 72 1.01e-05 TGGTCCTTCT CTACTTCCTTCCCTCC GACATCACTG chr6:28136607-28137107 - 42 1.12e-05 CCTTTTTCAG TTCTCTCGCGACCTCT AGCCACTTCC chr16:2603125-2603625 - 63 1.12e-05 GCCCTTTGCG TTCTGTCCCGCCCACT GGTCAGCCCT chr6:49463063-49463563 - 66 1.25e-05 GGAAACGGGC ATCTAACCCTACCCCT AAACGTCATC chr20:33562072-33562572 - 50 1.25e-05 TCCACTACCC TTCCAACCCTCCCTGT TACCAGGGCT chr17:45148368-45148868 - 10 1.25e-05 CTGCTCAGTT CTCCTCCGCCTCCTCC TCTTTTCCT chr5:180810091-180810591 - 16 1.25e-05 CCCTGCAGAC CCACCTCCCTCGCTCC CGTGGTGGCG chr1:154182976-154183476 + 78 1.38e-05 TGTGACGTCC CTCTGCCGCGCCCTCC CACCGCC chr5:173144665-173145165 + 34 1.38e-05 CGGGGCTCGG CTTTGCCCCTTCCACC TGCAGCCCTG chr17:17958284-17958784 + 65 1.38e-05 TACTACCCCA TGCTTACCCTCCCTGC CCATATACAA chrX:85003641-85004141 + 19 1.38e-05 AGTCGAACTG ATTTGTCCCTCTCTGC TCTCCGTCTG chr8:71355221-71355721 - 24 1.69e-05 TCAGGACTAT CTCATTCCCTGTCACT AGACTATAGG chr12:51172704-51173204 + 77 1.86e-05 TCCGCTGAGC CGACTTCTCGCCCTCT GTAGCCCC chr21:25734806-25735306 - 51 1.86e-05 GGAAGCACTT ACCCTCCACTTCCTCC TCCTGTTTGG chr18:3247445-3247945 + 72 1.86e-05 ACCACACTGG CGACTTCCCTCTCTGT CGCCCCTCCG chr1:228459031-228459531 + 79 1.86e-05 AACCTCCCCA ACCCTACCCGCCCCCC ATGGGC chr15:70892256-70892756 + 6 2.04e-05 TTGAT ATCTTCCTCCTCCTCC TCCCTGCGCT chr19:49580397-49580897 + 83 2.04e-05 GCTCAAGTCC TCTCTTCTCTTTCTCT CT chr5:93582518-93583018 + 20 2.04e-05 TTCTCCCCCT CGTCATCCCTTCCCCC TCTGGGGTGT chr15:90265356-90265856 + 57 2.24e-05 AAATAACTTG CTACTACCCAGCCTCC GGCCCGCCCC chr1:220527612-220528112 + 84 2.24e-05 TTCACATCAG CTCTCTCTCACCCTCA A chr17:42154862-42155362 - 71 2.46e-05 AAGTCCCGCG ATCCCTCGCGCGCTCC CTACCGCCAC chr16:28974504-28975004 + 52 2.46e-05 GCGGGGACCC CTTCCACCCTGGCTCC CGCGTCACAT chr13:52194233-52194733 + 5 2.46e-05 ACAC ATCCCCCGCGCTCTCC TCCGTTTCCG chr18:24426289-24426789 - 29 2.69e-05 GCCTTGCTCC CGCCTTCACTGTCTCC CGTAGGGCGG chr8:74350128-74350628 - 74 2.69e-05 TCCGCCCTGG ACTTCTCCCTCCCACA CTGCCCCGCA chr6:21953894-21954394 + 34 2.95e-05 CGGTTTTAAA TTACCACCCTACCACT GCTAAACCTC chr1:217630924-217631424 - 57 2.95e-05 AGTTTAATTT ATTTGTCTCTGTCTCT ACTGCGAGTA chr21:29073505-29074005 + 8 2.95e-05 TCCAATT AGCCCACCCTTTCCCT GCCGCCAGGT chr19:4633051-4633551 - 3 3.22e-05 GGCCCGCACG ACCTGTCCCGTCCCCT CC chr11:2400275-2400775 + 12 4.18e-05 GCAGGCCTGG CCCCTCCTCTTCCTGT TCTTGGTCAA chr12:6493133-6493633 + 4 4.18e-05 CCT CTACCACCCTTCCCGC CTCAGTGCTT chr17:59707369-59707869 - 14 4.55e-05 TCCAGAAGGG ATACGTTCCTCCCTCC TTTCGGCGAG chr1:25998103-25998603 + 83 4.55e-05 GTGCGTAACC CTCCGCCTCACCCTCC TC chr16:2682197-2682697 - 68 4.95e-05 GTCCTCTGAG TTCTGTCCCGCCCACA GGTCCGCCCT chr12:65606289-65606789 + 10 4.95e-05 CCTCATAAA ACTCTACCCACTCTCT TCTCTAAGTA chrX:71366023-71366523 - 30 4.95e-05 TTACTGAGCT CCCTTACCCTACCAGC CTCTACCGGA chr1:155140249-155140749 + 2 5.36e-05 C ATCTCTCGCCCTCCCC ATTCAGCCTT chr8:130015198-130015698 - 36 5.36e-05 TTGGGCAAGT CGCTTACCCTCTCTGA GTCTTAGGGT chr6:26571611-26572111 + 69 5.81e-05 atgcgggcat cgatcccgctacctct cgcatgctaa chr6:34887830-34888330 + 42 6.29e-05 CGATGACATC ACCCCTACCGCTCTCC TGAGGGGTCA chr15:66504691-66505191 + 43 9.85e-05 GATACAAAAA ATATCTCTCTACCACA CTACAAAAGT chr1:54052664-54053164 - 19 9.85e-05 AAATCGGCCC TTCAATCGCTGTCTCC CATCTGTGTA chr19:17337114-17337614 + 75 1.22e-04 AACAACATTT CGCTACACCTACCTCC ATACCGCCTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTCYYTCCCTYCCTCY MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:93783967-93784467 5.9e-10 1_[+7]_83 chr5:53478397-53478897 1.3e-09 24_[-7]_60 chr1:234723902-234724402 3.7e-08 35_[-7]_49 chr5:37371026-37371526 1.7e-07 60_[-7]_24 chr22:39520174-39520674 2e-07 67_[-7]_17 chr16:3003772-3004272 2.4e-07 3_[-7]_81 chr1:40257882-40258382 3.9e-07 47_[-7]_37 chr10:101442053-10144255 4.7e-07 10_[+7]_74 chr12:50111901-50112401 5.5e-07 11_[-7]_73 chr19:36214708-36215208 8.5e-07 21_[-7]_63 chr16:1308127-1308627 1.1e-06 66_[-7]_18 chr12:54359085-54359585 1.3e-06 72_[-7]_12 chr17:46922816-46923316 1.3e-06 3_[+7]_81 chr1:150926120-150926620 1.9e-06 65_[+7]_19 chr12:89525902-89526402 2.2e-06 3_[-7]_81 chr1:179882537-179883037 2.5e-06 52_[-7]_32 chr17:81253449-81253949 2.9e-06 21_[+7]_63 chr8:22604441-22604941 2.9e-06 32_[-7]_52 chr1:66924920-66925420 3.7e-06 60_[+7]_24 chr19:19776285-19776785 3.7e-06 59_[+7]_25 chr19:36666555-36667055 4.1e-06 29_[+7]_55 chrX:54182128-54182628 4.6e-06 74_[-7]_10 chr10:102152023-10215252 4.6e-06 22_[+7]_62 chr14:36835046-36835546 4.6e-06 73_[+7]_11 chr10:97401107-97401607 5.2e-06 11_[+7]_73 chr17:51153278-51153778 5.2e-06 23_[-7]_61 chr2:43995842-43996342 5.8e-06 16_[-7]_68 chr7:103344608-103345108 6.5e-06 [+7]_84 chr17:58417458-58417958 6.5e-06 53_[+7]_31 chr7:102748618-102749118 8.1e-06 41_[+7]_43 chr7:77122175-77122675 8.1e-06 84_[-7] chr1:109984491-109984991 8.1e-06 3_[+7]_81 chr4:82373861-82374361 9.1e-06 49_[+7]_35 chr5:176388748-176389248 1e-05 71_[-7]_13 chr6:28136607-28137107 1.1e-05 41_[-7]_43 chr16:2603125-2603625 1.1e-05 62_[-7]_22 chr6:49463063-49463563 1.2e-05 65_[-7]_19 chr20:33562072-33562572 1.2e-05 49_[-7]_35 chr17:45148368-45148868 1.2e-05 9_[-7]_75 chr5:180810091-180810591 1.2e-05 15_[-7]_69 chr1:154182976-154183476 1.4e-05 77_[+7]_7 chr5:173144665-173145165 1.4e-05 33_[+7]_51 chr17:17958284-17958784 1.4e-05 64_[+7]_20 chrX:85003641-85004141 1.4e-05 18_[+7]_66 chr8:71355221-71355721 1.7e-05 23_[-7]_61 chr12:51172704-51173204 1.9e-05 76_[+7]_8 chr21:25734806-25735306 1.9e-05 50_[-7]_34 chr18:3247445-3247945 1.9e-05 71_[+7]_13 chr1:228459031-228459531 1.9e-05 78_[+7]_6 chr15:70892256-70892756 2e-05 5_[+7]_79 chr19:49580397-49580897 2e-05 82_[+7]_2 chr5:93582518-93583018 2e-05 19_[+7]_65 chr15:90265356-90265856 2.2e-05 56_[+7]_28 chr1:220527612-220528112 2.2e-05 83_[+7]_1 chr17:42154862-42155362 2.5e-05 70_[-7]_14 chr16:28974504-28975004 2.5e-05 51_[+7]_33 chr13:52194233-52194733 2.5e-05 4_[+7]_80 chr18:24426289-24426789 2.7e-05 28_[-7]_56 chr8:74350128-74350628 2.7e-05 73_[-7]_11 chr6:21953894-21954394 2.9e-05 33_[+7]_51 chr1:217630924-217631424 2.9e-05 56_[-7]_28 chr21:29073505-29074005 2.9e-05 7_[+7]_77 chr19:4633051-4633551 3.2e-05 2_[-7]_82 chr11:2400275-2400775 4.2e-05 11_[+7]_73 chr12:6493133-6493633 4.2e-05 3_[+7]_81 chr17:59707369-59707869 4.6e-05 13_[-7]_71 chr1:25998103-25998603 4.6e-05 82_[+7]_2 chr16:2682197-2682697 4.9e-05 67_[-7]_17 chr12:65606289-65606789 4.9e-05 9_[+7]_75 chrX:71366023-71366523 4.9e-05 29_[-7]_55 chr1:155140249-155140749 5.4e-05 1_[+7]_83 chr8:130015198-130015698 5.4e-05 35_[-7]_49 chr6:26571611-26572111 5.8e-05 68_[+7]_16 chr6:34887830-34888330 6.3e-05 41_[+7]_43 chr15:66504691-66505191 9.8e-05 42_[+7]_42 chr1:54052664-54053164 9.8e-05 18_[-7]_66 chr19:17337114-17337614 0.00012 74_[+7]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTCYYTCCCTYCCTCY MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF MTCYYTCCCTYCCTCY width=16 seqs=77 chr11:93783967-93784467 ( 2) CTCTTTCCCTCCCTCT 1 chr5:53478397-53478897 ( 25) CTCCTTCCCTCCCTCT 1 chr1:234723902-234724402 ( 36) CTTCCTCCCTCCCTCT 1 chr5:37371026-37371526 ( 61) TCCTTTCCCTCCCTCC 1 chr22:39520174-39520674 ( 68) TCCCTTCCCTCCCTCC 1 chr16:3003772-3004272 ( 4) CTTCTTCCCGCCCTCT 1 chr1:40257882-40258382 ( 48) CCCCATCCCTCCCTCT 1 chr10:101442053-10144255 ( 11) CTCTCTCTCTCTCTCT 1 chr12:50111901-50112401 ( 12) CTTTCTCCCTCCCACC 1 chr19:36214708-36215208 ( 22) CTCCTCCCCTCCCCCC 1 chr16:1308127-1308627 ( 67) CTCATTCCCTCCCTCA 1 chr12:54359085-54359585 ( 73) CTCTTTCGCTGTCTCT 1 chr17:46922816-46923316 ( 4) CTCCTTCCCCTTCTCC 1 chr1:150926120-150926620 ( 66) CTTTCACGCTTCCTCC 1 chr12:89525902-89526402 ( 4) ATACCTCCCGTCCTCT 1 chr1:179882537-179883037 ( 53) TTCTCTCACTTCCTCT 1 chr17:81253449-81253949 ( 22) CTCCATCCCTACCACC 1 chr8:22604441-22604941 ( 33) ACCTCTCCCTTCCCCC 1 chr1:66924920-66925420 ( 61) CTCCTTCCCCTCCCCC 1 chr19:19776285-19776785 ( 60) CCCTGCCCCTTCCTCT 1 chr19:36666555-36667055 ( 30) ATCCTTACCTGCCTCT 1 chrX:54182128-54182628 ( 75) CCACTACCCTACCTCC 1 chr10:102152023-10215252 ( 23) CGTCTACCCTACCTCT 1 chr14:36835046-36835546 ( 74) ATTACTCCCTCTCTCT 1 chr10:97401107-97401607 ( 12) AGCCTTCACTTCCTCT 1 chr17:51153278-51153778 ( 24) CGCCCACGCTTCCTCT 1 chr2:43995842-43996342 ( 17) ATCCGTCGCTCCCCCC 1 chr7:103344608-103345108 ( 1) CTCACACCCTCCCACC 1 chr17:58417458-58417958 ( 54) TTCTTTCGCTCTCCCC 1 chr7:102748618-102749118 ( 42) CTCTTACCCGTGCTCC 1 chr7:77122175-77122675 ( 85) CTCTTACCCGTGCTCC 1 chr1:109984491-109984991 ( 4) CTTTCTCCCCGCCTCT 1 chr4:82373861-82374361 ( 50) CTTTATACCTTCCTCT 1 chr5:176388748-176389248 ( 72) CTACTTCCTTCCCTCC 1 chr6:28136607-28137107 ( 42) TTCTCTCGCGACCTCT 1 chr16:2603125-2603625 ( 63) TTCTGTCCCGCCCACT 1 chr6:49463063-49463563 ( 66) ATCTAACCCTACCCCT 1 chr20:33562072-33562572 ( 50) TTCCAACCCTCCCTGT 1 chr17:45148368-45148868 ( 10) CTCCTCCGCCTCCTCC 1 chr5:180810091-180810591 ( 16) CCACCTCCCTCGCTCC 1 chr1:154182976-154183476 ( 78) CTCTGCCGCGCCCTCC 1 chr5:173144665-173145165 ( 34) CTTTGCCCCTTCCACC 1 chr17:17958284-17958784 ( 65) TGCTTACCCTCCCTGC 1 chrX:85003641-85004141 ( 19) ATTTGTCCCTCTCTGC 1 chr8:71355221-71355721 ( 24) CTCATTCCCTGTCACT 1 chr12:51172704-51173204 ( 77) CGACTTCTCGCCCTCT 1 chr21:25734806-25735306 ( 51) ACCCTCCACTTCCTCC 1 chr18:3247445-3247945 ( 72) CGACTTCCCTCTCTGT 1 chr1:228459031-228459531 ( 79) ACCCTACCCGCCCCCC 1 chr15:70892256-70892756 ( 6) ATCTTCCTCCTCCTCC 1 chr19:49580397-49580897 ( 83) TCTCTTCTCTTTCTCT 1 chr5:93582518-93583018 ( 20) CGTCATCCCTTCCCCC 1 chr15:90265356-90265856 ( 57) CTACTACCCAGCCTCC 1 chr1:220527612-220528112 ( 84) CTCTCTCTCACCCTCA 1 chr17:42154862-42155362 ( 71) ATCCCTCGCGCGCTCC 1 chr16:28974504-28975004 ( 52) CTTCCACCCTGGCTCC 1 chr13:52194233-52194733 ( 5) ATCCCCCGCGCTCTCC 1 chr18:24426289-24426789 ( 29) CGCCTTCACTGTCTCC 1 chr8:74350128-74350628 ( 74) ACTTCTCCCTCCCACA 1 chr6:21953894-21954394 ( 34) TTACCACCCTACCACT 1 chr1:217630924-217631424 ( 57) ATTTGTCTCTGTCTCT 1 chr21:29073505-29074005 ( 8) AGCCCACCCTTTCCCT 1 chr19:4633051-4633551 ( 3) ACCTGTCCCGTCCCCT 1 chr11:2400275-2400775 ( 12) CCCCTCCTCTTCCTGT 1 chr12:6493133-6493633 ( 4) CTACCACCCTTCCCGC 1 chr17:59707369-59707869 ( 14) ATACGTTCCTCCCTCC 1 chr1:25998103-25998603 ( 83) CTCCGCCTCACCCTCC 1 chr16:2682197-2682697 ( 68) TTCTGTCCCGCCCACA 1 chr12:65606289-65606789 ( 10) ACTCTACCCACTCTCT 1 chrX:71366023-71366523 ( 30) CCCTTACCCTACCAGC 1 chr1:155140249-155140749 ( 2) ATCTCTCGCCCTCCCC 1 chr8:130015198-130015698 ( 36) CGCTTACCCTCTCTGA 1 chr6:26571611-26572111 ( 69) CGATCCCGCTACCTCT 1 chr6:34887830-34888330 ( 42) ACCCCTACCGCTCTCC 1 chr15:66504691-66505191 ( 43) ATATCTCTCTACCACA 1 chr1:54052664-54053164 ( 19) TTCAATCGCTGTCTCC 1 chr19:17337114-17337614 ( 75) CGCTACACCTACCTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTCYYTCCCTYCCTCY MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 10.2795 E= 3.4e-012 35 102 -1291 -53 -1291 -41 -82 150 -53 121 -1291 -11 -179 88 -1291 93 -111 24 -95 93 14 -82 -1291 141 -211 176 -1291 -411 -211 126 -71 -94 -1291 184 -1291 -411 -211 -182 -60 162 -79 76 -124 35 -1291 135 -208 6 -1291 186 -1291 -1291 -65 -82 -1291 164 -1291 170 -141 -1291 -153 88 -1291 89 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTCYYTCCCTYCCTCY MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 77 E= 3.4e-012 0.285714 0.558442 0.000000 0.155844 0.000000 0.207792 0.155844 0.636364 0.155844 0.636364 0.000000 0.207792 0.064935 0.506494 0.000000 0.428571 0.103896 0.324675 0.142857 0.428571 0.246753 0.155844 0.000000 0.597403 0.051948 0.935065 0.000000 0.012987 0.051948 0.662338 0.168831 0.116883 0.000000 0.987013 0.000000 0.012987 0.051948 0.077922 0.181818 0.688312 0.129870 0.467532 0.116883 0.285714 0.000000 0.701299 0.064935 0.233766 0.000000 1.000000 0.000000 0.000000 0.142857 0.155844 0.000000 0.701299 0.000000 0.896104 0.103896 0.000000 0.077922 0.506494 0.000000 0.415584 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif MTCYYTCCCTYCCTCY MEME-7 regular expression -------------------------------------------------------------------------------- [CA][TC][CT][CT][TC][TA]CCCT[CT][CT]CTC[CT] -------------------------------------------------------------------------------- Time 2101.30 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCATTTYACAGATGRGRAAACTGAGGCTBA MEME-8 width = 31 sites = 9 llr = 262 E-value = 7.9e-024 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCATTTYACAGATGRGRAAACTGAGGCTBA MEME-8 Description -------------------------------------------------------------------------------- Simplified A :::9::2191a:812716999:1:a:::2:7 pos.-specific C a9a11:16:8:::11::11::82::::9:41 probability G ::::::1:11:a216393::11:a:aa::22 matrix T :1::9a63:::::71::::1:17::::183: bits 2.2 * * * 1.9 * * * ** **** 1.7 * **** * ** *** **** 1.5 * **** * ** *** **** Relative 1.3 ****** * *** * *** ****** Entropy 1.1 ****** * *** ** *** ****** (42.0 bits) 0.9 ****** ***** ** *********** * 0.6 ****** ******* ************** * 0.4 ************** **************** 0.2 ******************************* 0.0 ------------------------------- Multilevel CCCATTTCACAGATGAGAAAACTGAGGCTCA consensus AT G AG G C ATG sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCATTTYACAGATGRGRAAACTGAGGCTBA MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr19:40403180-40403680 + 67 1.22e-16 tagaataagt cccatttcagagatgagaaaactgaggcaca gaa chr22:24805653-24806153 + 32 1.61e-16 ccacattata cccattttaaagatgagaaaactgaggcttg gagaATATCG chr10:22616152-22616652 + 58 5.02e-16 tattatcatg cccattacacagataaggaaattgaggctta gtgagattag chr19:48513118-48513618 + 20 8.86e-15 tttaatcatg cccattgtacagatgaggcaactgaggcaca gcgcggggta chr19:39125128-39125628 - 6 1.84e-14 ATCATTAATA CCCATTTTACAGATAAAGAAACAGAGGTTCA GAGGG chr11:67507644-67508144 + 25 1.50e-13 CGTGACCACG cccacttcacaggccagcaaactgaggctca gcgagggtag chr10:14691316-14691816 + 52 3.02e-13 ccttatcttc ctccttcaacagaagggaaaactgaggctta aaACATTAAA chr11:78188237-78188737 + 9 5.11e-13 atgccatc cccatttcacagatgggaatggcgaggctgg gatagattag chr19:3705946-3706446 + 34 2.57e-12 GTTGGCTGTC CCCATTACGCAGGGTGGAAAACCGAGGCTGC CCGGCGGGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCATTTYACAGATGRGRAAACTGAGGCTBA MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:40403180-40403680 1.2e-16 66_[+8]_3 chr22:24805653-24806153 1.6e-16 31_[+8]_38 chr10:22616152-22616652 5e-16 57_[+8]_12 chr19:48513118-48513618 8.9e-15 19_[+8]_50 chr19:39125128-39125628 1.8e-14 5_[-8]_64 chr11:67507644-67508144 1.5e-13 24_[+8]_45 chr10:14691316-14691816 3e-13 51_[+8]_18 chr11:78188237-78188737 5.1e-13 8_[+8]_61 chr19:3705946-3706446 2.6e-12 33_[+8]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCATTTYACAGATGRGRAAACTGAGGCTBA MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCATTTYACAGATGRGRAAACTGAGGCTBA width=31 seqs=9 chr19:40403180-40403680 ( 67) CCCATTTCAGAGATGAGAAAACTGAGGCACA 1 chr22:24805653-24806153 ( 32) CCCATTTTAAAGATGAGAAAACTGAGGCTTG 1 chr10:22616152-22616652 ( 58) CCCATTACACAGATAAGGAAATTGAGGCTTA 1 chr19:48513118-48513618 ( 20) CCCATTGTACAGATGAGGCAACTGAGGCACA 1 chr19:39125128-39125628 ( 6) CCCATTTTACAGATAAAGAAACAGAGGTTCA 1 chr11:67507644-67508144 ( 25) CCCACTTCACAGGCCAGCAAACTGAGGCTCA 1 chr10:14691316-14691816 ( 52) CTCCTTCAACAGAAGGGAAAACTGAGGCTTA 1 chr11:78188237-78188737 ( 9) CCCATTTCACAGATGGGAATGGCGAGGCTGG 1 chr19:3705946-3706446 ( 34) CCCATTACGCAGGGTGGAAAACCGAGGCTGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCATTTYACAGATGRGRAAACTGAGGCTBA MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 11.4897 E= 7.9e-024 -982 186 -982 -982 -982 169 -982 -101 -982 186 -982 -982 198 -131 -982 -982 -982 -131 -982 198 -982 -982 -982 215 -1 -131 -131 131 -101 101 -982 57 198 -982 -131 -982 -101 150 -131 -982 215 -982 -982 -982 -982 -982 186 -982 179 -982 -31 -982 -101 -131 -131 157 -1 -131 101 -101 157 -982 27 -982 -101 -982 169 -982 131 -131 27 -982 198 -131 -982 -982 198 -982 -982 -101 198 -982 -131 -982 -982 150 -131 -101 -101 -31 -982 157 -982 -982 186 -982 215 -982 -982 -982 -982 -982 186 -982 -982 -982 186 -982 -982 169 -982 -101 -1 -982 -982 179 -982 69 -31 57 157 -131 -31 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCATTTYACAGATGRGRAAACTGAGGCTBA MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 9 E= 7.9e-024 0.000000 1.000000 0.000000 0.000000 0.000000 0.888889 0.000000 0.111111 0.000000 1.000000 0.000000 0.000000 0.888889 0.111111 0.000000 0.000000 0.000000 0.111111 0.000000 0.888889 0.000000 0.000000 0.000000 1.000000 0.222222 0.111111 0.111111 0.555556 0.111111 0.555556 0.000000 0.333333 0.888889 0.000000 0.111111 0.000000 0.111111 0.777778 0.111111 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.777778 0.000000 0.222222 0.000000 0.111111 0.111111 0.111111 0.666667 0.222222 0.111111 0.555556 0.111111 0.666667 0.000000 0.333333 0.000000 0.111111 0.000000 0.888889 0.000000 0.555556 0.111111 0.333333 0.000000 0.888889 0.111111 0.000000 0.000000 0.888889 0.000000 0.000000 0.111111 0.888889 0.000000 0.111111 0.000000 0.000000 0.777778 0.111111 0.111111 0.111111 0.222222 0.000000 0.666667 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.888889 0.000000 0.111111 0.222222 0.000000 0.000000 0.777778 0.000000 0.444444 0.222222 0.333333 0.666667 0.111111 0.222222 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCATTTYACAGATGRGRAAACTGAGGCTBA MEME-8 regular expression -------------------------------------------------------------------------------- CCCATT[TA][CT]ACAG[AG]T[GA][AG]G[AG]AAAC[TC]GAGGC[TA][CTG][AG] -------------------------------------------------------------------------------- Time 2376.02 secs. ******************************************************************************** ******************************************************************************** MOTIF VCCGGAAGY MEME-9 width = 9 sites = 83 llr = 737 E-value = 1.5e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif VCCGGAAGY MEME-9 Description -------------------------------------------------------------------------------- Simplified A 3::::aa:: pos.-specific C 27a::::35 probability G 43:aa::7: matrix T 1:::::::5 bits 2.2 * 1.9 ***** 1.7 ***** 1.5 ***** Relative 1.3 ***** Entropy 1.1 ******* (12.8 bits) 0.9 ******** 0.6 ******** 0.4 ******** 0.2 ********* 0.0 --------- Multilevel GCCGGAAGT consensus AG CC sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCGGAAGY MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------- chr5:149345136-149345636 + 15 4.97e-06 CACACTGAGA GCCGGAAGT GTTGCCTTAG chr6:36874590-36875090 - 21 4.97e-06 GCTAATCGAC GCCGGAAGT AGCAATTACT chr17:42773190-42773690 + 39 4.97e-06 GGAAGCGAAG GCCGGAAGT CCTTAGCCGG chr12:6493133-6493633 + 41 4.97e-06 CGGTCCGCCT GCCGGAAGT TTTGGAGCGC chr4:152779737-152780237 - 23 4.97e-06 GAGCAGCGAA GCCGGAAGT GAGGAGACCG chr3:180601881-180602381 - 66 4.97e-06 TCTGGAGGCT GCCGGAAGT ACACAGACAG chr20:20017058-20017558 - 79 4.97e-06 CGCCCGCCCT GCCGGAAGT CTCCCGGAGC chr12:57745062-57745562 - 70 4.97e-06 TTCCCTCGTC GCCGGAAGT TCCTGGGAAT chr1:44213173-44213673 + 85 4.97e-06 AATGAGCACC GCCGGAAGT TTCTGCC chr12:49567884-49568384 - 49 9.00e-06 TGGTTCGTTA ACCGGAAGT AGACGTACCT chr5:159263006-159263506 - 84 9.00e-06 CGAAAGCG ACCGGAAGT GAAGGGCGGG chr16:84186779-84187279 + 76 9.00e-06 TCCGGTTTGG ACCGGAAGT GCCTCCTGCG chr16:667901-668401 + 3 9.00e-06 GA ACCGGAAGT GCGGGGCGGG chr19:50376126-50376626 - 30 9.00e-06 TTGGAAACTC ACCGGAAGT TTACCGGGTA chr3:119498180-119498680 + 90 9.00e-06 CCCGCCCTCA ACCGGAAGT CT chr10:18659024-18659524 - 80 1.51e-05 ACCACCCATC GCCGGAAGC TAGGCGCGTG chr1:43172076-43172576 - 35 1.51e-05 ATGGTTTGCC GCCGGAAGC GGAAGTCCCA chr11:118359313-11835981 - 21 1.51e-05 TCATCTCCGC GCCGGAAGC ACGGTGTGCA chr20:46364169-46364669 + 92 1.51e-05 GGTAACTTCC GCCGGAAGC chr8:143281438-143281938 + 39 2.01e-05 caccaaacag accggaagc ctgaggaaaa chr11:93783967-93784467 + 72 2.01e-05 ACCGTGATTC ACCGGAAGC GCTCTAGGGA chr8:142717957-142718457 + 46 2.01e-05 tggcaggtag accggaagc ctgggaaaga chr7:139340030-139340530 - 71 2.01e-05 GTGGGTTTTT ACCGGAAGC AGCCGGACCT chr17:46922816-46923316 + 91 2.01e-05 GGGTCCTGCG ACCGGAAGC C chrX:71366023-71366523 - 17 2.01e-05 ACCAGCCTCT ACCGGAAGC TCAAAACAGA chr5:110738752-110739252 - 22 2.51e-05 ACGTTGGAAA CCCGGAAGT CTTCGGAGCA chr6:7389575-7390075 - 12 2.51e-05 CACCGCCTCG CCCGGAAGT CTGACTTGAG chr7:44200680-44201180 - 30 2.51e-05 GAAATGTGAG CCCGGAAGT ACAATGCAGC chr19:55279896-55280396 + 39 2.51e-05 cacggtttca cccggaagt gccaggcgta chr1:154182976-154183476 - 18 3.00e-05 GGGCGTAGCA GGCGGAAGT AAGGGTGAGA chr7:108569513-108570013 - 2 3.00e-05 AACCGGAGGA GGCGGAAGT G chr15:40382678-40383178 - 35 3.00e-05 CCGGTAGCTA GGCGGAAGT GGGTGGGAAT chr17:28357388-28357888 + 37 3.00e-05 GCGCGCGGCG GGCGGAAGT CCGGGTTGGG chr5:133051421-133051921 + 65 3.00e-05 TAAGAAAAAC GGCGGAAGT AGGCCGCAGC chr16:807577-808077 - 13 3.00e-05 TATCTCCCAA GGCGGAAGT AAACGGCGCG chr19:49580397-49580897 - 6 3.00e-05 CCTTCTGCTG GGCGGAAGT GGGCG chr19:36772817-36773317 + 86 3.00e-05 TCCGGTTCTC GGCGGAAGT AGCCCC chr16:2603125-2603625 - 17 3.00e-05 TCACATGGCA GGCGGAAGT TCCATCCGGG chr5:176448120-176448620 - 35 3.50e-05 ACCGTCACCC GCCGGAACT GACCTCAGCC chr15:41402274-41402774 - 74 3.50e-05 TCTGTACTCG GCCGGAACT TTGGTGTTCT chr21:28992753-28993253 - 1 4.51e-05 GGGAGGCGGG AGCGGAAGT chr17:18315057-18315557 - 2 4.51e-05 CGCCGCGTGA CCCGGAAGC G chr11:72112474-72112974 + 4 4.51e-05 CGA CCCGGAAGC GCTTCACCCA chr7:92245698-92246198 - 70 4.51e-05 CGGCCGCCGA CCCGGAAGC TCTTTCACCG chr11:18526680-18527180 - 66 4.51e-05 ACGTAGTGGA AGCGGAAGT GGTGTAGTGG chr2:232550398-232550898 + 81 4.51e-05 GACCCGGTGG AGCGGAAGT CACTCCCTGA chr6:4021022-4021522 + 2 4.51e-05 T CCCGGAAGC TGCGACACTA chr12:6663085-6663585 - 67 5.53e-05 TGTCTGTAAG GGCGGAAGC GGGCTACAGC chr5:40835040-40835540 - 12 5.53e-05 TGCTTCCCTG GGCGGAAGC TTCTGAGCGT chr12:110450055-11045055 + 89 5.53e-05 GGGCGAGGTA GGCGGAAGC GAA chr12:69470130-69470630 - 7 5.53e-05 GGGTTTTGGC ACCGGAACT GCTCTC chr3:57597454-57597954 - 23 5.53e-05 CCTTCATCCG GGCGGAAGC GTCTCACCCT chr16:1782556-1783056 + 71 6.14e-05 CATCGTCTGC GCCGGAACC TGCGGGACCG chr15:75368377-75368877 - 77 6.14e-05 CCCTCTGGAC GCCGGAACC TTTGGTTTCC chr9:36190642-36191142 - 75 6.64e-05 AGACGGGTAA AGCGGAAGC CCTACCCGTG chr1:155934240-155934740 - 40 7.63e-05 CGACATTTTC ACCGGAACC GCTCGGCCCC chr12:48105899-48106399 + 2 7.63e-05 A ACCGGAACC GCCTTCACAG chr17:59707369-59707869 - 86 7.63e-05 CAGACA ACCGGAACC CGCTCACGTC chr1:173714620-173715120 + 46 7.63e-05 CCGGAGCCGC ACCGGAACC CCTTGGCGGA chr11:45917639-45918139 - 85 7.63e-05 TCTGGCC CGCGGAAGT TAAGCAACCA chr1:100132760-100133260 - 77 8.13e-05 CAGGTTAATA CCCGGAACT ACCACAACCG chr16:690202-690702 - 86 8.13e-05 CCCTGA CCCGGAACT TTCGTGGTGT chr22:19479290-19479790 + 8 8.63e-05 GGACTCG GGCGGAACT AAGCTACAAA chr17:59209706-59210206 + 26 8.63e-05 GAGAAGAGGA GGCGGAACT CAAGTGACGG chr19:14571811-14572311 + 41 1.07e-04 CTAGCTCCTA CCCGGAACC ACTGACCCCT chr6:136289492-136289992 - 38 1.07e-04 GAGATAAATT CCCGGAACC GCGATTCGGC chr16:67872821-67873321 - 22 1.07e-04 AGCCGAGGCT CCCGGAACC TGCCAGGGCC chr5:83077349-83077849 + 73 1.07e-04 AGAGGTAGGA TCCGGAAGT GGGGCTGCCT chr1:154973975-154974475 - 21 1.07e-04 ACTCTTTCAC CCCGGAACC CCTCTCCCGG chr11:62621943-62622443 - 40 1.07e-04 CCCGGTGGTT CCCGGAACC TGGCGGTGGG chr1:163321558-163322058 - 74 1.13e-04 CAGGGCGCAG GGCGGAACC ATTGCTCGCG chr15:64387522-64388022 + 46 1.13e-04 GGTGCAAGCT GGCGGAACC CGCGTGAGAG chr1:169367868-169368368 + 92 1.23e-04 GGAAACGTAT TCCGGAAGC chr21:46286062-46286562 - 65 1.23e-04 GGTTGTGGGG AGCGGAACC GGATCGCAGC chr19:1383558-1384058 + 43 1.23e-04 CCGAAAGCGC AGCGGAACC TCCCGGCTCC chr19:35748176-35748676 + 51 1.23e-04 ATGGTTTGTT TCCGGAAGC AAAGCCCCAG chr17:63773561-63774061 + 54 1.23e-04 GAACCGGTGC TCCGGAAGC TAAAGGTGGC chrX:47836611-47837111 + 18 1.38e-04 TTTGCGCACG CGCGGAACC TCCGCTTCCC chr1:120176322-120176822 - 79 1.38e-04 GAAGGCAGAT CGCGGAACC AGTGTTCTGA chr14:30621969-30622469 + 49 1.42e-04 GGAGGTGGGG TCCGGAACT CAGGCACACC chr5:121961599-121962099 + 39 1.61e-04 AGCCCTCTGC GCCGGTAGT TGTTCTGTCT chr11:78188237-78188737 + 91 1.61e-04 ACGTACCCTC GCCGGTAGT C chr1:27914582-27915082 - 19 2.37e-04 GGCGCTGCGT CGCGGTAGT ATTGTTCTGA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCGGAAGY MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:149345136-149345636 5e-06 14_[+9]_77 chr6:36874590-36875090 5e-06 20_[-9]_71 chr17:42773190-42773690 5e-06 38_[+9]_53 chr12:6493133-6493633 5e-06 40_[+9]_51 chr4:152779737-152780237 5e-06 22_[-9]_69 chr3:180601881-180602381 5e-06 65_[-9]_26 chr20:20017058-20017558 5e-06 78_[-9]_13 chr12:57745062-57745562 5e-06 69_[-9]_22 chr1:44213173-44213673 5e-06 84_[+9]_7 chr12:49567884-49568384 9e-06 48_[-9]_43 chr5:159263006-159263506 9e-06 83_[-9]_8 chr16:84186779-84187279 9e-06 75_[+9]_16 chr16:667901-668401 9e-06 2_[+9]_89 chr19:50376126-50376626 9e-06 29_[-9]_62 chr3:119498180-119498680 9e-06 89_[+9]_2 chr10:18659024-18659524 1.5e-05 79_[-9]_12 chr1:43172076-43172576 1.5e-05 34_[-9]_57 chr11:118359313-11835981 1.5e-05 20_[-9]_71 chr20:46364169-46364669 1.5e-05 91_[+9] chr8:143281438-143281938 2e-05 38_[+9]_53 chr11:93783967-93784467 2e-05 71_[+9]_20 chr8:142717957-142718457 2e-05 45_[+9]_46 chr7:139340030-139340530 2e-05 70_[-9]_21 chr17:46922816-46923316 2e-05 90_[+9]_1 chrX:71366023-71366523 2e-05 16_[-9]_75 chr5:110738752-110739252 2.5e-05 21_[-9]_70 chr6:7389575-7390075 2.5e-05 11_[-9]_80 chr7:44200680-44201180 2.5e-05 29_[-9]_62 chr19:55279896-55280396 2.5e-05 38_[+9]_53 chr1:154182976-154183476 3e-05 17_[-9]_74 chr7:108569513-108570013 3e-05 1_[-9]_90 chr15:40382678-40383178 3e-05 34_[-9]_57 chr17:28357388-28357888 3e-05 36_[+9]_55 chr5:133051421-133051921 3e-05 64_[+9]_27 chr16:807577-808077 3e-05 12_[-9]_79 chr19:49580397-49580897 3e-05 5_[-9]_86 chr19:36772817-36773317 3e-05 85_[+9]_6 chr16:2603125-2603625 3e-05 16_[-9]_75 chr5:176448120-176448620 3.5e-05 34_[-9]_57 chr15:41402274-41402774 3.5e-05 73_[-9]_18 chr21:28992753-28993253 4.5e-05 [-9]_91 chr17:18315057-18315557 4.5e-05 1_[-9]_90 chr11:72112474-72112974 4.5e-05 3_[+9]_88 chr7:92245698-92246198 4.5e-05 69_[-9]_22 chr11:18526680-18527180 4.5e-05 65_[-9]_26 chr2:232550398-232550898 4.5e-05 80_[+9]_11 chr6:4021022-4021522 4.5e-05 1_[+9]_90 chr12:6663085-6663585 5.5e-05 66_[-9]_25 chr5:40835040-40835540 5.5e-05 11_[-9]_80 chr12:110450055-11045055 5.5e-05 88_[+9]_3 chr12:69470130-69470630 5.5e-05 6_[-9]_85 chr3:57597454-57597954 5.5e-05 22_[-9]_69 chr16:1782556-1783056 6.1e-05 70_[+9]_21 chr15:75368377-75368877 6.1e-05 76_[-9]_15 chr9:36190642-36191142 6.6e-05 74_[-9]_17 chr1:155934240-155934740 7.6e-05 39_[-9]_52 chr12:48105899-48106399 7.6e-05 1_[+9]_90 chr17:59707369-59707869 7.6e-05 85_[-9]_6 chr1:173714620-173715120 7.6e-05 45_[+9]_46 chr11:45917639-45918139 7.6e-05 84_[-9]_7 chr1:100132760-100133260 8.1e-05 76_[-9]_15 chr16:690202-690702 8.1e-05 85_[-9]_6 chr22:19479290-19479790 8.6e-05 7_[+9]_84 chr17:59209706-59210206 8.6e-05 25_[+9]_66 chr19:14571811-14572311 0.00011 40_[+9]_51 chr6:136289492-136289992 0.00011 37_[-9]_54 chr16:67872821-67873321 0.00011 21_[-9]_70 chr5:83077349-83077849 0.00011 72_[+9]_19 chr1:154973975-154974475 0.00011 20_[-9]_71 chr11:62621943-62622443 0.00011 39_[-9]_52 chr1:163321558-163322058 0.00011 73_[-9]_18 chr15:64387522-64388022 0.00011 45_[+9]_46 chr1:169367868-169368368 0.00012 91_[+9] chr21:46286062-46286562 0.00012 64_[-9]_27 chr19:1383558-1384058 0.00012 42_[+9]_49 chr19:35748176-35748676 0.00012 50_[+9]_41 chr17:63773561-63774061 0.00012 53_[+9]_38 chrX:47836611-47837111 0.00014 17_[+9]_74 chr1:120176322-120176822 0.00014 78_[-9]_13 chr14:30621969-30622469 0.00014 48_[+9]_43 chr5:121961599-121962099 0.00016 38_[+9]_53 chr11:78188237-78188737 0.00016 90_[+9]_1 chr1:27914582-27915082 0.00024 18_[-9]_73 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCGGAAGY MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF VCCGGAAGY width=9 seqs=83 chr5:149345136-149345636 ( 15) GCCGGAAGT 1 chr6:36874590-36875090 ( 21) GCCGGAAGT 1 chr17:42773190-42773690 ( 39) GCCGGAAGT 1 chr12:6493133-6493633 ( 41) GCCGGAAGT 1 chr4:152779737-152780237 ( 23) GCCGGAAGT 1 chr3:180601881-180602381 ( 66) GCCGGAAGT 1 chr20:20017058-20017558 ( 79) GCCGGAAGT 1 chr12:57745062-57745562 ( 70) GCCGGAAGT 1 chr1:44213173-44213673 ( 85) GCCGGAAGT 1 chr12:49567884-49568384 ( 49) ACCGGAAGT 1 chr5:159263006-159263506 ( 84) ACCGGAAGT 1 chr16:84186779-84187279 ( 76) ACCGGAAGT 1 chr16:667901-668401 ( 3) ACCGGAAGT 1 chr19:50376126-50376626 ( 30) ACCGGAAGT 1 chr3:119498180-119498680 ( 90) ACCGGAAGT 1 chr10:18659024-18659524 ( 80) GCCGGAAGC 1 chr1:43172076-43172576 ( 35) GCCGGAAGC 1 chr11:118359313-11835981 ( 21) GCCGGAAGC 1 chr20:46364169-46364669 ( 92) GCCGGAAGC 1 chr8:143281438-143281938 ( 39) ACCGGAAGC 1 chr11:93783967-93784467 ( 72) ACCGGAAGC 1 chr8:142717957-142718457 ( 46) ACCGGAAGC 1 chr7:139340030-139340530 ( 71) ACCGGAAGC 1 chr17:46922816-46923316 ( 91) ACCGGAAGC 1 chrX:71366023-71366523 ( 17) ACCGGAAGC 1 chr5:110738752-110739252 ( 22) CCCGGAAGT 1 chr6:7389575-7390075 ( 12) CCCGGAAGT 1 chr7:44200680-44201180 ( 30) CCCGGAAGT 1 chr19:55279896-55280396 ( 39) CCCGGAAGT 1 chr1:154182976-154183476 ( 18) GGCGGAAGT 1 chr7:108569513-108570013 ( 2) GGCGGAAGT 1 chr15:40382678-40383178 ( 35) GGCGGAAGT 1 chr17:28357388-28357888 ( 37) GGCGGAAGT 1 chr5:133051421-133051921 ( 65) GGCGGAAGT 1 chr16:807577-808077 ( 13) GGCGGAAGT 1 chr19:49580397-49580897 ( 6) GGCGGAAGT 1 chr19:36772817-36773317 ( 86) GGCGGAAGT 1 chr16:2603125-2603625 ( 17) GGCGGAAGT 1 chr5:176448120-176448620 ( 35) GCCGGAACT 1 chr15:41402274-41402774 ( 74) GCCGGAACT 1 chr21:28992753-28993253 ( 1) AGCGGAAGT 1 chr17:18315057-18315557 ( 2) CCCGGAAGC 1 chr11:72112474-72112974 ( 4) CCCGGAAGC 1 chr7:92245698-92246198 ( 70) CCCGGAAGC 1 chr11:18526680-18527180 ( 66) AGCGGAAGT 1 chr2:232550398-232550898 ( 81) AGCGGAAGT 1 chr6:4021022-4021522 ( 2) CCCGGAAGC 1 chr12:6663085-6663585 ( 67) GGCGGAAGC 1 chr5:40835040-40835540 ( 12) GGCGGAAGC 1 chr12:110450055-11045055 ( 89) GGCGGAAGC 1 chr12:69470130-69470630 ( 7) ACCGGAACT 1 chr3:57597454-57597954 ( 23) GGCGGAAGC 1 chr16:1782556-1783056 ( 71) GCCGGAACC 1 chr15:75368377-75368877 ( 77) GCCGGAACC 1 chr9:36190642-36191142 ( 75) AGCGGAAGC 1 chr1:155934240-155934740 ( 40) ACCGGAACC 1 chr12:48105899-48106399 ( 2) ACCGGAACC 1 chr17:59707369-59707869 ( 86) ACCGGAACC 1 chr1:173714620-173715120 ( 46) ACCGGAACC 1 chr11:45917639-45918139 ( 85) CGCGGAAGT 1 chr1:100132760-100133260 ( 77) CCCGGAACT 1 chr16:690202-690702 ( 86) CCCGGAACT 1 chr22:19479290-19479790 ( 8) GGCGGAACT 1 chr17:59209706-59210206 ( 26) GGCGGAACT 1 chr19:14571811-14572311 ( 41) CCCGGAACC 1 chr6:136289492-136289992 ( 38) CCCGGAACC 1 chr16:67872821-67873321 ( 22) CCCGGAACC 1 chr5:83077349-83077849 ( 73) TCCGGAAGT 1 chr1:154973975-154974475 ( 21) CCCGGAACC 1 chr11:62621943-62622443 ( 40) CCCGGAACC 1 chr1:163321558-163322058 ( 74) GGCGGAACC 1 chr15:64387522-64388022 ( 46) GGCGGAACC 1 chr1:169367868-169368368 ( 92) TCCGGAAGC 1 chr21:46286062-46286562 ( 65) AGCGGAACC 1 chr19:1383558-1384058 ( 43) AGCGGAACC 1 chr19:35748176-35748676 ( 51) TCCGGAAGC 1 chr17:63773561-63774061 ( 54) TCCGGAAGC 1 chrX:47836611-47837111 ( 18) CGCGGAACC 1 chr1:120176322-120176822 ( 79) CGCGGAACC 1 chr14:30621969-30622469 ( 49) TCCGGAACT 1 chr5:121961599-121962099 ( 39) GCCGGTAGT 1 chr11:78188237-78188737 ( 91) GCCGGTAGT 1 chr1:27914582-27915082 ( 19) CGCGGTAGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCGGAAGY MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 9 n= 55200 bayes= 10.3521 E= 1.5e-005 30 -27 65 -190 -1302 129 24 -1302 -1302 186 -1302 -1302 -1302 -1302 186 -1302 -1302 -1302 186 -1302 210 -1302 -1302 -263 216 -1302 -1302 -1302 -1302 13 134 -1302 -1302 77 -1302 124 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCGGAAGY MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 9 nsites= 83 E= 1.5e-005 0.277108 0.228916 0.433735 0.060241 0.000000 0.674699 0.325301 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.963855 0.000000 0.000000 0.036145 1.000000 0.000000 0.000000 0.000000 0.000000 0.301205 0.698795 0.000000 0.000000 0.469880 0.000000 0.530120 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VCCGGAAGY MEME-9 regular expression -------------------------------------------------------------------------------- [GAC][CG]CGGAA[GC][TC] -------------------------------------------------------------------------------- Time 2652.68 secs. ******************************************************************************** ******************************************************************************** MOTIF TCWCTCACYCWCTCWCTCWCWC MEME-10 width = 22 sites = 13 llr = 230 E-value = 7.2e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif TCWCTCACYCWCTCWCTCWCWC MEME-10 Description -------------------------------------------------------------------------------- Simplified A 1261117:21512:5132615: pos.-specific C :7:8:8194817:a:8:8:9:9 probability G ::::::::1:::::::::1::1 matrix T 9142922142428:527:3:5: bits 2.2 1.9 * 1.7 * * * 1.5 * * * * * * Relative 1.3 * * * * ** * * * Entropy 1.1 * * * ** *** ** *** (25.5 bits) 0.9 ******** ************* 0.6 ******** ************* 0.4 ******** ************* 0.2 ********************** 0.0 ---------------------- Multilevel TCACTCACCCACTCACTCACTC consensus AT T T TTA T AAT A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCWCTCACYCWCTCWCTCWCWC MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr9:136579563-136580063 + 46 9.57e-12 actcattcat tcactcacccactcattcactc acttgctcat chr1:234723902-234724402 - 3 2.92e-11 CCTCCATTTC TCTCTCTCTCTCTCTCTCACAC AC chr16:1308127-1308627 - 28 5.33e-11 ATTCCCTCCC TCACTCACTCATTCTCACTCTC ACTCATTCCC chr17:48728638-48729138 + 40 7.09e-11 tctctctttc tctctctctctctctctctctc tctctctgtc chr1:226711146-226711646 - 61 7.09e-11 TCTCTCTCTC TCTCTCTCTCTCTCTCTCTCTC TTTCAAAACA chr7:2314733-2315233 + 55 5.08e-10 catcctgcaa tcattcacccactcactcactg catcctgcat chr7:70092329-70092829 - 63 9.69e-09 ATATCAGCTT TCACTCACACTCTCTTAAGCTC ATGTCTGCAT chr3:72887609-72888109 - 57 1.13e-08 GTTCGTTCGT TTACTTCCCCATTCACTCACAC ACCCATGCCA chr10:101442053-10144255 - 55 1.31e-08 AGGTTGGAAT TATCTCATTTACACACACACAC ACACACACAC chr12:41288175-41288675 - 20 2.47e-08 TGCCACTTGT TATCTAACCATATCACTCACTC AAAACATTAC chr5:175378415-175378915 + 76 4.14e-08 TCATAGTCCA TAAATCACCTCTTCACTAACAC GAC chr8:16825859-16826359 + 8 5.28e-08 CAGATac acacacacgcacacacacacac acagacatac chr7:135716592-135717092 - 34 2.08e-07 CTGTGGGAGG TCATTTACACACACTATATAAC TTAATCCTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCWCTCACYCWCTCWCTCWCWC MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:136579563-136580063 9.6e-12 45_[+10]_33 chr1:234723902-234724402 2.9e-11 2_[-10]_76 chr16:1308127-1308627 5.3e-11 27_[-10]_51 chr17:48728638-48729138 7.1e-11 39_[+10]_39 chr1:226711146-226711646 7.1e-11 60_[-10]_18 chr7:2314733-2315233 5.1e-10 54_[+10]_24 chr7:70092329-70092829 9.7e-09 62_[-10]_16 chr3:72887609-72888109 1.1e-08 56_[-10]_22 chr10:101442053-10144255 1.3e-08 54_[-10]_24 chr12:41288175-41288675 2.5e-08 19_[-10]_59 chr5:175378415-175378915 4.1e-08 75_[+10]_3 chr8:16825859-16826359 5.3e-08 7_[+10]_71 chr7:135716592-135717092 2.1e-07 33_[-10]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCWCTCACYCWCTCWCTCWCWC MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TCWCTCACYCWCTCWCTCWCWC width=22 seqs=13 chr9:136579563-136580063 ( 46) TCACTCACCCACTCATTCACTC 1 chr1:234723902-234724402 ( 3) TCTCTCTCTCTCTCTCTCACAC 1 chr16:1308127-1308627 ( 28) TCACTCACTCATTCTCACTCTC 1 chr17:48728638-48729138 ( 40) TCTCTCTCTCTCTCTCTCTCTC 1 chr1:226711146-226711646 ( 61) TCTCTCTCTCTCTCTCTCTCTC 1 chr7:2314733-2315233 ( 55) TCATTCACCCACTCACTCACTG 1 chr7:70092329-70092829 ( 63) TCACTCACACTCTCTTAAGCTC 1 chr3:72887609-72888109 ( 57) TTACTTCCCCATTCACTCACAC 1 chr10:101442053-10144255 ( 55) TATCTCATTTACACACACACAC 1 chr12:41288175-41288675 ( 20) TATCTAACCATATCACTCACTC 1 chr5:175378415-175378915 ( 76) TAAATCACCTCTTCACTAACAC 1 chr8:16825859-16826359 ( 8) ACACACACGCACACACACACAC 1 chr7:135716592-135717092 ( 34) TCATTTACACACACTATATAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCWCTCACYCWCTCWCTCWCWC MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 12.9964 E= 7.2e-005 -154 -1035 -1035 204 4 133 -1035 -154 145 -1035 -1035 78 -154 148 -1035 -54 -154 -1035 -1035 204 -154 148 -1035 -54 162 -184 -1035 4 -1035 174 -1035 -154 -54 48 -184 78 -154 148 -1035 -54 126 -184 -1035 78 -154 133 -1035 4 4 -1035 -1035 178 -1035 186 -1035 -1035 126 -1035 -1035 104 -154 148 -1035 -54 46 -1035 -1035 162 4 148 -1035 -1035 145 -1035 -184 46 -154 174 -1035 -1035 104 -1035 -1035 126 -1035 174 -184 -1035 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCWCTCACYCWCTCWCTCWCWC MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 13 E= 7.2e-005 0.076923 0.000000 0.000000 0.923077 0.230769 0.692308 0.000000 0.076923 0.615385 0.000000 0.000000 0.384615 0.076923 0.769231 0.000000 0.153846 0.076923 0.000000 0.000000 0.923077 0.076923 0.769231 0.000000 0.153846 0.692308 0.076923 0.000000 0.230769 0.000000 0.923077 0.000000 0.076923 0.153846 0.384615 0.076923 0.384615 0.076923 0.769231 0.000000 0.153846 0.538462 0.076923 0.000000 0.384615 0.076923 0.692308 0.000000 0.230769 0.230769 0.000000 0.000000 0.769231 0.000000 1.000000 0.000000 0.000000 0.538462 0.000000 0.000000 0.461538 0.076923 0.769231 0.000000 0.153846 0.307692 0.000000 0.000000 0.692308 0.230769 0.769231 0.000000 0.000000 0.615385 0.000000 0.076923 0.307692 0.076923 0.923077 0.000000 0.000000 0.461538 0.000000 0.000000 0.538462 0.000000 0.923077 0.076923 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TCWCTCACYCWCTCWCTCWCWC MEME-10 regular expression -------------------------------------------------------------------------------- T[CA][AT]CTC[AT]C[CT]C[AT][CT][TA]C[AT]C[TA][CA][AT]C[TA]C -------------------------------------------------------------------------------- Time 2918.61 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:95721070-95721570 5.37e-02 7_[+3(1.14e-06)]_77 chr3:42819931-42820431 9.82e-02 100 chr1:220118997-220119497 9.66e-01 100 chrX:48958117-48958617 4.01e-05 65_[+1(4.04e-07)]_20 chr5:96083482-96083982 1.71e-03 33_[-3(1.48e-06)]_51 chr14:105180527-10518102 3.01e-02 100 chr15:77420537-77421037 3.89e-01 100 chr16:89186734-89187234 1.00e+00 100 chr1:38012390-38012890 1.87e-02 2_[+4(2.66e-06)]_72 chr5:93582518-93583018 7.23e-07 19_[+7(2.04e-05)]_18_\ [-10(1.34e-07)]_1_[-3(8.24e-05)]_8 chr19:3705946-3706446 3.85e-06 33_[+8(2.57e-12)]_36 chr1:54052664-54053164 6.44e-02 18_[-7(9.85e-05)]_66 chr3:9749729-9750229 3.90e-05 14_[+1(1.90e-06)]_71 chr1:120176322-120176822 7.86e-03 100 chr8:120266367-120266867 2.50e-01 100 chr3:9396807-9397307 2.03e-01 100 chr10:15879590-15880090 5.77e-01 100 chr8:37637937-37638437 6.89e-01 100 chr12:132828772-13282927 4.68e-01 100 chr6:112231655-112232155 9.45e-02 100 chr1:228459031-228459531 1.51e-01 78_[+7(1.86e-05)]_6 chr15:89334698-89335198 2.04e-01 100 chr18:58781624-58782124 7.74e-03 11_[-3(7.13e-05)]_12_[-3(5.68e-05)]_\ 1_[-3(5.46e-05)]_[-3(4.40e-06)]_12 chr5:77995900-77996400 1.55e-01 73_[-5(2.85e-05)]_5 chr13:52617156-52617656 1.57e-02 63_[+5(1.64e-05)]_15 chr19:43827126-43827626 9.48e-04 80_[+1(1.83e-05)]_5 chrX:73943974-73944474 7.29e-01 100 chr19:45326332-45326832 1.74e-01 100 chr6:131628023-131628523 8.17e-01 100 chr19:47256203-47256703 4.36e-04 52_[-1(8.42e-05)]_5_[-1(1.24e-07)]_\ 13 chr14:58427248-58427748 1.29e-02 83_[+3(1.98e-08)]_1 chr17:32341934-32342434 6.13e-01 100 chr20:46364169-46364669 4.88e-04 9_[-5(9.95e-05)]_[-1(3.19e-06)]_45_\ [+9(1.51e-05)] chr22:38701220-38701720 4.53e-01 100 chr7:1504132-1504632 1.12e-02 83_[-1(2.22e-05)]_2 chr17:39199800-39200300 3.36e-04 30_[+1(5.02e-06)]_55 chr15:74099992-74100492 3.28e-02 45_[+1(9.58e-06)]_40 chr10:50463978-50464478 3.68e-03 3_[+3(1.12e-07)]_81 chr1:27959119-27959619 2.57e-23 6_[-3(4.84e-07)]_17_[-2(4.37e-21)]_\ 3_[+5(4.43e-12)] chr19:40285574-40286074 5.94e-01 100 chr7:135716592-135717092 9.52e-02 33_[-10(2.08e-07)]_45 chr7:2314733-2315233 2.48e-05 18_[+10(5.32e-06)]_14_\ [+10(5.08e-10)]_24 chr4:80307272-80307772 3.57e-01 100 chr9:94259007-94259507 4.28e-05 51_[-4(2.94e-09)]_23 chr11:47269031-47269531 3.74e-02 43_[+8(1.05e-05)]_26 chr12:28190237-28190737 4.12e-03 4_[+1(2.44e-05)]_81 chr3:78994289-78994789 9.25e-01 100 chr11:66002007-66002507 1.80e-02 36_[+1(3.21e-05)]_49 chr3:161576706-161577206 8.53e-01 100 chr16:25111463-25111963 5.79e-01 100 chr2:100178086-100178586 1.50e-02 68_[-1(3.75e-06)]_17 chr6:26331266-26331766 5.02e-01 100 chr12:55973701-55974201 8.56e-01 100 chr1:148264910-148265410 6.50e-01 100 chr11:64269821-64270321 7.46e-02 33_[-1(3.21e-05)]_52 chr5:180810091-180810591 4.44e-02 15_[-7(1.25e-05)]_69 chr10:14692283-14692783 7.47e-01 100 chr9:35111548-35112048 5.52e-01 100 chr1:107682411-107682911 7.38e-01 100 chr17:51153278-51153778 9.09e-02 23_[-7(5.21e-06)]_61 chr12:123383453-12338395 5.11e-03 33_[-8(1.21e-06)]_20_[-9(7.63e-05)]_\ 7 chr1:150926120-150926620 3.43e-04 30_[+1(1.34e-05)]_20_[+7(1.93e-06)]_\ 19 chr16:3003772-3004272 2.23e-04 3_[-7(2.37e-07)]_53_[-4(5.84e-05)]_\ 2 chr15:64387522-64388022 2.94e-02 100 chr1:12478146-12478646 6.98e-01 100 chr1:119140170-119140670 9.86e-01 100 chr12:50025329-50025829 5.96e-01 100 chr10:110916551-11091705 8.10e-01 100 chr22:24155440-24155940 3.28e-01 100 chr22:37686128-37686628 4.09e-03 16_[-1(1.20e-05)]_69 chr6:143450498-143450998 1.31e-01 35_[+1(7.28e-05)]_50 chr11:118359313-11835981 7.33e-04 20_[-9(1.51e-05)]_42_[+1(4.04e-07)]_\ 14 chr19:44113076-44113576 2.62e-05 32_[-4(1.23e-11)]_42 chr7:44044350-44044850 8.21e-02 61_[+1(2.68e-05)]_24 chr9:13956029-13956529 8.14e-05 7_[-3(9.14e-09)]_61_[-3(3.82e-06)] chr15:41402274-41402774 1.04e-02 24_[+5(7.02e-06)]_27_[-9(3.50e-05)]_\ 18 chr11:73787655-73788155 9.00e-01 100 chr5:157142575-157143075 6.60e-01 100 chr16:2603125-2603625 8.57e-03 16_[-9(3.00e-05)]_37_[-7(1.12e-05)]_\ 22 chr1:28648527-28649027 8.12e-03 83_[-3(5.73e-08)]_1 chr13:45464572-45465072 9.46e-02 49_[-1(2.68e-05)]_36 chr6:27544050-27544550 7.22e-27 8_[-3(4.95e-11)]_17_[-2(1.23e-18)]_\ 1_[+5(5.08e-12)] chr6:27505640-27506140 9.35e-01 100 chr1:167162990-167163490 6.70e-01 100 chr15:66504691-66505191 4.03e-03 26_[+3(1.48e-06)]_[+7(9.85e-05)]_26_\ [-3(8.84e-05)] chr10:7302332-7302832 2.46e-01 100 chr16:1271683-1272183 9.99e-01 100 chr10:8534078-8534578 7.96e-01 100 chr8:71355221-71355721 6.77e-02 23_[-7(1.69e-05)]_61 chr16:25055673-25056173 9.01e-26 4_[-5(3.20e-13)]_3_[+2(5.09e-20)]_\ 18_[+3(1.23e-08)]_1 chr19:45450372-45450872 1.33e-11 32_[+3(2.61e-10)]_6_[-6(7.36e-13)]_\ 20 chr1:44213173-44213673 1.43e-02 40_[-1(1.90e-06)]_29_[+9(4.97e-06)]_\ 7 chr6:57317393-57317893 1.98e-02 22_[+1(1.28e-06)]_63 chr6:4021022-4021522 2.99e-02 1_[+9(4.51e-05)]_90 chr5:88516234-88516734 8.62e-01 100 chr1:43172076-43172576 1.07e-03 34_[-9(1.51e-05)]_8_[+1(6.58e-07)]_\ 34 chr19:5720087-5720587 8.53e-03 21_[+1(2.29e-06)]_18_[+1(2.22e-05)]_\ 31 chr1:25998103-25998603 1.51e-02 78_[+5(1.31e-05)] chr1:200620580-200621080 1.62e-03 26_[+7(1.38e-05)]_58 chr10:14691316-14691816 3.32e-08 51_[+8(3.02e-13)]_18 chr12:131710722-13171122 8.80e-01 100 chr10:101442053-10144255 7.44e-08 9_[+10(1.92e-09)]_4_[-3(1.35e-06)]_\ 3_[-10(1.31e-08)]_24 chr15:69143744-69144244 4.31e-01 100 chr12:89525902-89526402 1.23e-02 3_[-7(2.20e-06)]_81 chr3:123585177-123585677 4.31e-03 70_[+10(4.59e-05)]_8 chr9:18976719-18977219 5.67e-01 100 chr1:70143202-70143702 9.98e-01 100 chr3:57597454-57597954 1.09e-01 22_[-9(5.53e-05)]_69 chr18:59079492-59079992 8.23e-02 100 chr19:38004418-38004918 6.33e-01 100 chr17:18087671-18088171 3.82e-04 55_[+6(1.31e-05)]_19 chr11:64317420-64317920 4.01e-07 4_[-1(1.69e-07)]_26_[-5(9.35e-05)]_\ 33 chr11:62653149-62653649 1.06e-01 100 chr17:58417458-58417958 3.43e-02 29_[+3(7.67e-05)]_8_[+7(6.53e-06)]_\ 10_[+7(9.16e-05)]_5 chr5:99900430-99900930 9.23e-02 23_[+10(7.18e-05)]_55 chr19:37506800-37507300 4.49e-01 100 chr9:86141743-86142243 8.37e-01 100 chr19:45406301-45406801 2.72e-01 100 chr15:96693934-96694434 3.50e-01 100 chr1:198837515-198838015 1.41e-01 100 chr3:156161110-156161610 1.03e-01 44_[-3(2.42e-06)]_40 chr1:205122023-205122523 2.28e-02 100 chr1:161153901-161154401 1.33e-01 23_[-3(9.15e-05)]_61 chr9:85743169-85743669 5.46e-01 100 chr2:3574953-3575453 3.71e-01 82_[+1(6.25e-05)]_3 chr22:35299697-35300197 2.28e-01 100 chr5:94469749-94470249 1.63e-01 [+10(5.82e-05)]_78 chr6:26571611-26572111 2.30e-04 38_[+4(4.85e-05)]_4_[+7(5.81e-05)]_\ 16 chr3:120742351-120742851 7.81e-01 100 chr11:78188237-78188737 2.22e-07 8_[+8(5.11e-13)]_61 chr22:21567259-21567759 6.62e-01 100 chr18:22184439-22184939 8.31e-15 22_[-3(1.80e-07)]_21_[-2(2.81e-19)]_\ 5 chr17:30906030-30906530 1.99e-04 4_[+1(1.24e-07)]_81 chr19:36772817-36773317 1.77e-02 70_[+1(4.37e-06)]_[+9(3.00e-05)]_6 chr17:45148368-45148868 1.95e-02 9_[-7(1.25e-05)]_75 chr8:16825859-16826359 6.21e-04 7_[+10(5.28e-08)]_7_[+3(1.91e-06)]_\ [+10(9.30e-05)]_26 chr5:122333029-122333529 2.34e-01 70_[-10(6.30e-05)]_8 chr16:89657416-89657916 1.04e-02 75_[+1(1.34e-05)]_10 chr12:124914556-12491505 7.06e-01 100 chr11:62841269-62841769 1.29e-01 [+10(2.47e-05)]_38_[+3(3.74e-05)]_\ 24 chr1:61091455-61091955 9.53e-01 100 chr1:150487007-150487507 1.28e-02 34_[+1(4.53e-05)]_51 chr6:26204279-26204779 4.26e-01 100 chr1:45499908-45500408 9.34e-06 5_[-4(7.24e-05)]_35_[+4(6.13e-10)]_\ 8 chr12:4538386-4538886 1.70e-01 100 chr8:11201481-11201981 6.88e-01 100 chr2:63588566-63589066 2.02e-01 51_[-4(1.63e-05)]_23 chr12:56007133-56007633 4.63e-02 13_[+7(8.51e-05)]_6_[+5(3.69e-05)]_\ 43 chr6:24774937-24775437 9.44e-01 100 chr17:66508769-66509269 3.74e-01 100 chrX:101407964-101408464 5.21e-01 100 chr19:38243751-38244251 5.78e-03 8_[+3(4.38e-07)]_76 chr1:1615150-1615650 2.79e-03 62_[+1(1.56e-06)]_23 chr10:96129696-96130196 3.06e-01 77_[+1(5.79e-05)]_8 chr1:148522556-148523056 1.53e-01 100 chr1:16545751-16546251 5.16e-01 100 chr18:3297278-3297778 8.61e-01 100 chr10:22616152-22616652 8.59e-09 57_[+8(5.02e-16)]_12 chr19:7522282-7522782 7.52e-01 100 chr15:66886250-66886750 8.67e-01 100 chr1:68217023-68217523 7.34e-01 100 chrX:71366023-71366523 7.40e-05 16_[-9(2.01e-05)]_4_[-7(4.95e-05)]_\ 33_[+1(1.49e-05)]_7 chr10:47553220-47553720 5.60e-01 100 chr19:3761735-3762235 6.94e-04 50_[-1(5.02e-06)]_35 chr17:4940242-4940742 2.99e-03 41_[-1(5.02e-06)]_44 chr15:75368377-75368877 5.66e-03 39_[+6(3.73e-05)]_11_[-9(6.14e-05)]_\ 15 chr19:49580397-49580897 1.63e-05 5_[-9(3.00e-05)]_7_[-1(6.58e-07)]_\ 46_[+7(2.04e-05)]_2 chr19:39212342-39212842 3.60e-02 67_[-10(5.67e-05)]_11 chr14:20662970-20663470 5.18e-01 100 chr5:160008682-160009182 3.48e-02 [+3(1.12e-07)]_84 chr19:10194308-10194808 3.50e-02 7_[-1(4.17e-05)]_78 chr1:16644456-16644956 3.31e-01 100 chr22:24805653-24806153 1.01e-10 31_[+8(1.61e-16)]_38 chr19:11536146-11536646 5.62e-01 56_[-8(4.54e-05)]_13 chr1:161764895-161765395 3.52e-18 24_[+5(3.20e-13)]_5_[+6(4.44e-16)]_\ 23 chr1:33127058-33127558 1.23e-01 33_[+1(2.68e-05)]_52 chr19:2702759-2703259 6.11e-01 100 chr1:81126903-81127403 9.56e-01 100 chr10:12195795-12196295 1.90e-02 55_[-3(2.07e-06)]_29 chr12:109477296-10947779 3.47e-03 6_[-8(6.51e-05)]_63 chr6:26285259-26285759 1.91e-01 100 chr16:77409299-77409799 1.48e-01 100 chr1:241847803-241848303 3.31e-01 100 chr1:173824292-173824792 1.69e-01 50_[-8(8.46e-05)]_19 chr1:220527612-220528112 1.84e-05 22_[+3(1.43e-08)]_11_[+3(2.27e-07)]_\ 7_[+10(1.35e-05)]_6 chrX:153928079-153928579 7.44e-03 61_[-1(5.78e-06)]_24 chr4:110904615-110905115 8.25e-01 100 chr19:48351416-48351916 5.93e-01 100 chr11:4094491-4094991 9.11e-01 100 chr1:11178257-11178757 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3.38e-02 25_[+9(4.51e-05)]_44_[-9(4.97e-06)]_\ 13 chr8:33513413-33513913 5.65e-01 100 chr7:139340030-139340530 2.95e-02 48_[-1(1.34e-05)]_7_[-9(2.01e-05)]_\ 21 chr3:180601881-180602381 8.23e-03 30_[+1(1.20e-05)]_20_[-9(4.97e-06)]_\ 26 chr19:36214708-36215208 6.66e-06 21_[-7(8.53e-07)]_15_[-4(2.68e-09)]_\ 22 chr17:80415116-80415616 2.64e-02 68_[-1(9.03e-05)]_17 chr19:16495951-16496451 1.15e-03 55_[+4(5.80e-08)]_19 chr22:37844459-37844959 1.77e-19 14_[+5(3.19e-10)]_5_[+6(8.22e-14)]_\ 10_[-3(2.61e-10)]_7 chr8:28445334-28445834 1.41e-01 100 chr1:173714620-173715120 1.22e-01 29_[+1(3.51e-05)]_1_[+9(7.63e-05)]_\ 46 chr2:112584277-112584777 2.69e-02 65_[-1(5.34e-05)]_20 chr12:53451726-53452226 9.66e-01 100 chr1:150876802-150877302 9.71e-17 17_[-5(5.08e-12)]_3_[+2(4.16e-18)]_\ 22 chr10:35890229-35890729 1.32e-01 100 chr10:102152023-10215252 9.46e-02 22_[+7(4.65e-06)]_62 chr1:31644882-31645382 3.70e-02 44_[-5(8.02e-05)]_34 chr10:8702990-8703490 5.15e-15 13_[+2(5.20e-18)]_17_[+3(2.61e-10)]_\ 18 chr4:152779737-152780237 9.21e-05 5_[+1(5.13e-07)]_2_[-9(4.97e-06)]_\ 69 chr17:34981748-34982248 1.82e-01 100 chr19:1383558-1384058 5.75e-02 60_[+1(3.21e-05)]_25 chr12:69470130-69470630 3.01e-03 4_[+1(3.83e-05)]_6_[+7(2.69e-05)]_\ [+9(2.51e-05)]_50 chrX:53225080-53225580 3.11e-01 26_[+8(8.94e-05)]_43 chr16:30957565-30958065 1.95e-01 100 chr1:20507949-20508449 1.17e-03 24_[-1(1.69e-07)]_16_[-1(3.21e-05)]_\ 30 chr1:169893813-169894313 1.87e-01 100 chr19:4233339-4233839 6.39e-01 100 chr9:36190642-36191142 1.18e-02 74_[-9(6.64e-05)]_17 chr19:48644710-48645210 1.66e-05 14_[+4(3.90e-12)]_34_[-4(3.52e-09)] chr14:74881627-74882127 2.68e-04 63_[+1(7.81e-08)]_22 chr12:110450055-11045055 7.82e-05 6_[-6(8.96e-05)]_25_[+1(2.29e-06)]_\ 16_[+9(5.53e-05)]_3 chr5:134367031-134367531 4.35e-01 100 chr12:6764237-6764737 1.22e-01 16_[-7(6.79e-05)]_24_[-7(6.29e-05)]_\ 28 chr15:40382678-40383178 7.44e-04 34_[-9(3.00e-05)]_5_[+9(9.00e-06)]_\ 43 chr6:7389575-7390075 4.18e-04 11_[-9(2.51e-05)]_12_[+1(5.78e-06)]_\ 53 chr5:83077349-83077849 3.49e-03 39_[-1(1.56e-06)]_14_[-1(1.07e-05)]_\ 17 chr17:40054131-40054631 2.99e-01 100 chr5:176388748-176389248 3.61e-03 71_[-7(1.01e-05)]_13 chr19:11435313-11435813 1.30e-03 83_[-1(1.28e-06)]_2 chr12:6493133-6493633 1.10e-03 3_[+7(4.18e-05)]_4_[+1(8.49e-06)]_2_\ [+9(4.97e-06)]_51 chrX:85003641-85004141 8.00e-02 18_[+7(1.38e-05)]_66 chr6:38974724-38975224 3.51e-01 100 chr5:110738752-110739252 3.03e-03 19_[+1(1.34e-05)]_5_[+1(1.56e-06)]_\ 46 chr10:97401107-97401607 1.14e-03 11_[+7(5.21e-06)]_10_[+1(9.58e-06)]_\ 24_[+1(4.53e-05)]_9 chr16:31033104-31033604 5.33e-01 100 chr19:41859680-41860180 1.38e-01 100 chr1:146039400-146039900 9.28e-16 24_[-6(4.44e-16)]_5_[-5(5.79e-13)]_\ 23 chr10:44752829-44753329 1.76e-01 31_[-3(7.40e-05)]_53 chr5:124740935-124741435 2.34e-01 10_[-3(5.42e-06)]_74 chrX:54182128-54182628 1.63e-01 74_[-7(4.65e-06)]_10 chr17:18315057-18315557 4.76e-02 1_[-9(4.51e-05)]_90 chr18:22493140-22493640 1.31e-01 100 chr1:233241731-233242231 3.26e-01 100 chr14:21383838-21384338 1.75e-07 17_[+1(5.78e-06)]_17_[-3(1.43e-08)]_\ 35 chr15:65517429-65517929 5.76e-04 52_[+1(2.20e-07)]_33 chr17:50372899-50373399 9.42e-05 83_[+1(4.07e-08)]_2 chr19:43596374-43596874 5.18e-02 3_[+8(1.21e-05)]_66 chr1:169483464-169483964 3.93e-01 100 chr1:40948867-40949367 6.34e-01 100 chr16:30697959-30698459 2.29e-01 100 chr3:183884631-183885131 1.97e-02 68_[+1(1.65e-05)]_17 chr19:8389771-8390271 9.78e-01 100 chr19:41310147-41310647 2.68e-01 100 chr10:104338335-10433883 3.37e-01 100 chr16:30598283-30598783 1.94e-22 7_[-5(1.35e-11)]_3_[+2(1.12e-21)]_\ 16_[+3(3.21e-07)] chr1:76294443-76294943 2.06e-01 45_[-3(9.69e-06)]_39 chr3:129160952-129161452 4.15e-03 74_[-1(1.49e-05)]_11 chr15:41774262-41774762 1.10e-01 100 chr12:54359085-54359585 5.73e-03 72_[-7(1.28e-06)]_12 chr19:39125128-39125628 7.47e-09 5_[-8(1.84e-14)]_33_[-10(5.98e-05)]_\ 9 chr10:15796033-15796533 4.51e-01 100 chr14:61331985-61332485 2.45e-04 6_[+4(6.63e-08)]_45_[-3(7.67e-05)]_\ 7 chr12:50111901-50112401 1.04e-02 11_[-7(5.47e-07)]_73 chr6:28136607-28137107 3.57e-06 24_[-1(4.07e-08)]_2_[-7(1.12e-05)]_\ 43 chr6:27545511-27546011 6.72e-01 100 chr19:39411939-39412439 8.20e-04 25_[-2(2.43e-06)]_39 chr6:143755246-143755746 1.34e-01 14_[+3(4.10e-06)]_70 chr16:67872821-67873321 2.36e-04 7_[-2(7.70e-05)]_4_[+9(4.97e-06)]_\ 44 chr19:17075294-17075794 7.87e-02 38_[-5(5.82e-05)]_40 chr2:173449084-173449584 2.72e-01 100 chr3:181328953-181329453 8.31e-01 100 chr1:109984491-109984991 2.11e-02 3_[+7(8.14e-06)]_81 chr19:44071882-44072382 3.11e-08 [-4(2.26e-12)]_20_[+1(2.22e-05)]_39 chr19:4723723-4724223 1.01e-02 37_[+1(1.49e-05)]_48 chr21:28992753-28993253 1.42e-01 [-9(4.51e-05)]_91 chr8:37360439-37360939 1.31e-01 100 chr22:40951437-40951937 2.63e-01 100 chr8:142717957-142718457 2.77e-04 45_[+9(2.01e-05)]_7_[-1(3.03e-07)]_\ 24 chr16:11915835-11916335 1.22e-04 71_[+4(1.92e-07)]_3 chr11:67507644-67508144 2.78e-08 24_[+8(1.50e-13)]_45 chr5:40835040-40835540 9.70e-02 11_[-9(5.53e-05)]_80 chr17:74203423-74203923 7.48e-02 29_[-1(6.25e-05)]_56 chr12:65606289-65606789 3.26e-02 9_[+7(4.95e-05)]_75 chr19:58519640-58520140 2.81e-01 40_[+1(3.21e-05)]_45 chr21:25734806-25735306 5.92e-04 50_[-7(1.86e-05)]_2_[+1(1.49e-05)]_\ 17 chr17:42773190-42773690 1.58e-03 38_[+9(4.97e-06)]_10_[+1(1.49e-05)]_\ 28 chr10:22552767-22553267 1.44e-02 100 chr1:197201319-197201819 7.17e-01 100 chr19:38374290-38374790 7.64e-04 60_[+1(8.49e-06)]_25 chr10:77287683-77288183 3.21e-01 54_[+8(4.37e-05)]_15 chr16:1308127-1308627 3.95e-06 23_[-10(4.56e-10)]_1_[-7(4.14e-06)]_\ 4_[-7(1.12e-06)]_[-7(1.12e-06)]_2 chr1:52955545-52956045 4.76e-02 31_[+6(8.46e-05)]_43 chr14:67359649-67360149 1.42e-03 8_[+1(1.90e-06)]_77 chr6:136289492-136289992 4.43e-02 100 chr5:181215948-181216448 1.67e-23 3_[-3(1.98e-08)]_15_[-2(4.37e-19)]_\ 3_[+5(5.79e-13)]_5 chr19:11344489-11344989 6.68e-01 100 chr12:122266259-12226675 1.07e-01 63_[-1(2.68e-05)]_22 chr7:77122175-77122675 1.95e-06 53_[+4(1.80e-10)]_5_[-7(8.14e-06)] chr17:17958284-17958784 2.58e-03 64_[+7(1.38e-05)]_20 chr1:223992386-223992886 9.65e-01 100 chr1:150628939-150629439 2.00e-01 100 chr1:229221371-229221871 3.29e-01 100 chr6:21953894-21954394 3.77e-02 33_[+7(2.95e-05)]_51 chr7:129054784-129055284 3.84e-01 100 chr15:70892256-70892756 1.11e-02 5_[+7(2.04e-05)]_79 chr1:156282725-156283225 5.67e-01 100 chr7:128476546-128477046 8.69e-01 100 chr14:80941611-80942111 1.62e-03 44_[+4(2.55e-10)]_30 chr17:81253449-81253949 8.29e-02 21_[+7(2.86e-06)]_41_[+7(2.86e-06)]_\ 6 chr18:24426289-24426789 2.28e-02 28_[-7(2.69e-05)]_56 chr4:82373861-82374361 2.95e-04 11_[+7(8.51e-05)]_23_\ [+10(1.62e-06)]_28 chr1:85274835-85275335 4.80e-01 100 chr22:19479290-19479790 8.21e-02 7_[+9(8.63e-05)]_84 chr12:119667676-11966817 2.14e-02 72_[+9(1.51e-05)]_19 chr19:48588610-48589110 8.75e-02 [-5(6.05e-05)]_32_[-5(6.29e-05)]_24 chr5:146182503-146183003 1.82e-03 27_[+4(9.80e-09)]_47 chr1:234723902-234724402 2.56e-08 2_[-10(2.92e-11)]_11_[-7(3.73e-08)]_\ 15_[-7(3.24e-06)]_18 chr17:1463107-1463607 4.26e-03 47_[+1(2.02e-05)]_38 chr10:75613677-75614177 1.15e-01 29_[-4(7.46e-05)]_45 chr16:25049544-25050044 6.83e-01 100 chr12:113221145-11322164 3.98e-01 100 chr19:58499269-58499769 2.13e-01 16_[-1(6.25e-05)]_13_[+9(7.63e-05)]_\ 47 chr1:827203-827703 6.56e-01 100 chr17:1258901-1259401 2.28e-17 23_[-3(3.77e-08)]_16_[-2(8.54e-22)]_\ 9 chr6:89829609-89830109 2.42e-02 70_[-5(4.82e-05)]_8 chr5:91383336-91383836 8.29e-01 100 chr10:5853639-5854139 5.82e-19 24_[-5(9.67e-12)]_3_[+2(1.44e-21)]_\ 15 chr16:1782556-1783056 1.22e-01 70_[+9(6.14e-05)]_21 chr19:17337114-17337614 5.29e-01 100 chr19:14571811-14572311 8.79e-02 69_[+1(3.51e-05)]_16 chr1:63523140-63523640 6.44e-01 100 chr1:28088353-28088853 2.15e-04 81_[-1(4.07e-08)]_4 chr1:150321317-150321817 5.24e-05 18_[+1(1.34e-05)]_31_[-2(1.60e-05)] chr19:39445317-39445817 6.18e-01 100 chr6:27495576-27496076 1.59e-01 21_[-6(6.08e-05)]_53 chr10:75379137-75379637 9.86e-01 100 chr19:44164671-44165171 4.80e-05 10_[-4(7.56e-10)]_64 chr6:127343088-127343588 1.72e-02 100 chr16:690202-690702 1.97e-03 15_[+9(4.97e-06)]_61_[-9(8.13e-05)]_\ 6 chr1:163321558-163322058 1.85e-01 100 chr11:2400275-2400775 5.55e-02 16_[+1(3.21e-05)]_35_[+1(3.51e-05)]_\ 19 chr14:20461431-20461931 8.72e-01 100 chr1:40257882-40258382 6.49e-02 47_[-7(3.94e-07)]_37 chr21:46286062-46286562 1.42e-03 12_[+1(1.04e-06)]_73 chr16:71808709-71809209 1.94e-01 100 chr14:21511156-21511656 7.17e-03 13_[+1(2.71e-06)]_72 chr1:1375104-1375604 3.86e-01 23_[+1(2.68e-05)]_62 chr3:17730375-17730875 5.97e-01 100 chr6:90587028-90587528 3.68e-01 44_[-1(7.28e-05)]_41 chr8:37302631-37303131 1.83e-01 100 chr1:80403305-80403805 1.69e-01 100 chr11:93783967-93784467 7.29e-08 1_[+7(5.87e-10)]_21_[+9(2.51e-05)]_\ 24_[+9(2.01e-05)]_20 chr16:84186779-84187279 1.16e-03 60_[+1(5.02e-06)]_[+9(9.00e-06)]_16 chr5:150449660-150450160 3.33e-01 29_[-7(5.36e-05)]_55 chr2:201071700-201072200 5.37e-01 100 chr3:9952344-9952844 1.09e-01 100 chr3:15098912-15099412 2.85e-02 59_[-1(1.28e-06)]_26 chr11:61792430-61792930 4.41e-03 26_[-4(3.09e-08)]_48 chr7:108569513-108570013 1.39e-04 1_[-9(3.00e-05)]_36_[+9(4.97e-06)]_\ 45 chr16:2047673-2048173 2.12e-05 42_[+4(2.23e-09)]_32 chr18:49460605-49461105 2.98e-15 34_[-6(4.44e-16)]_5_[-5(4.39e-11)]_\ 13 chr7:130440790-130441290 6.45e-02 49_[-2(5.43e-05)]_15 chr5:173144665-173145165 8.59e-02 33_[+7(1.38e-05)]_51 chr11:118251992-11825249 2.59e-02 100 chr1:169367868-169368368 9.11e-03 19_[-3(1.63e-05)]_65 chr17:59707369-59707869 2.47e-04 13_[-7(4.55e-05)]_33_[-1(1.69e-07)]_\ 6_[+1(4.92e-05)]_2 chr6:36874590-36875090 5.45e-03 20_[-9(4.97e-06)]_30_[+1(1.04e-06)]_\ 26 chr12:53501261-53501761 8.00e-01 100 chr19:35248559-35249059 8.67e-01 100 chr12:51172704-51173204 2.25e-04 14_[+1(3.19e-06)]_47_[+7(1.86e-05)]_\ 8 chr16:1420557-1421057 2.16e-01 26_[-1(9.58e-06)]_59 chr2:24076212-24076712 3.43e-03 30_[-1(4.92e-05)]_18_[+1(4.37e-06)]_\ 22 chr1:230978766-230979266 2.46e-05 35_[+4(5.95e-09)]_7_[+1(1.07e-05)]_\ 17 chr6:82260138-82260638 5.80e-01 26_[-3(9.47e-05)]_58 chr16:30571838-30572338 5.71e-01 100 chr12:806374-806874 1.84e-01 26_[-3(8.56e-06)]_58 chr1:224330205-224330705 2.54e-01 22_[-5(2.45e-05)]_56 chr3:48439898-48440398 5.83e-01 66_[+1(9.67e-05)]_19 chr16:2682197-2682697 2.85e-03 7_[-1(2.68e-05)]_45_[-7(4.95e-05)]_\ 17 chr1:20732198-20732698 4.30e-01 100 chr19:17932753-17933253 7.31e-01 100 chr14:44961891-44962391 4.74e-05 5_[+4(9.27e-10)]_3_[-4(9.48e-05)]_\ 40 chr17:57849799-57850299 1.45e-03 47_[-1(1.69e-07)]_38 chr1:167936275-167936775 1.21e-01 100 chr19:12681637-12682137 1.29e-03 23_[-1(5.79e-05)]_17_[-1(6.58e-07)]_\ 30 chr5:81301369-81301869 5.94e-02 22_[+1(5.02e-06)]_63 chr1:43389617-43390117 1.92e-06 56_[+1(1.69e-07)]_29 chr1:100132760-100133260 2.79e-03 33_[+1(4.37e-06)]_28_[-9(8.13e-05)]_\ 15 chr5:159263006-159263506 1.92e-04 44_[+1(1.17e-08)]_3_[+1(1.65e-05)]_\ 4_[+1(1.69e-07)]_4 chr12:38316440-38316940 1.84e-01 100 chr12:6663085-6663585 2.54e-02 66_[-9(5.53e-05)]_25 chr12:34022154-34022654 6.12e-02 100 chr19:36666555-36667055 2.28e-04 29_[+7(4.14e-06)]_28_[+9(9.00e-06)]_\ 18 chr7:5822859-5823359 1.10e-07 43_[-1(1.34e-05)]_6_[-4(1.80e-10)]_\ 10 chr3:14651489-14651989 9.84e-05 28_[+10(7.76e-05)]_10_\ [+1(4.04e-07)]_25 chr19:39435664-39436164 3.39e-02 29_[-2(9.85e-05)]_5_[-1(5.78e-06)]_\ 15 chr5:149345136-149345636 4.48e-03 14_[+9(4.97e-06)]_47_[-1(6.63e-06)]_\ 15 chr1:154182976-154183476 1.35e-05 17_[-9(3.00e-05)]_12_[-1(4.17e-05)]_\ 4_[-1(8.42e-05)]_1_[+5(6.43e-06)]_5 chr14:90383121-90383621 2.97e-01 65_[-8(6.64e-05)]_4 chr19:43950898-43951398 5.60e-03 79_[+1(5.02e-06)]_6 chr5:37371026-37371526 4.12e-03 22_[-7(4.18e-05)]_22_[-7(1.68e-07)]_\ 24 chr1:156740987-156741487 1.61e-02 33_[-1(5.34e-05)]_19_[-1(3.83e-05)]_\ 18 chr15:55196721-55197221 1.35e-05 30_[-1(8.49e-06)]_15_[-1(1.83e-05)]_\ 25 chr7:102748618-102749118 6.63e-07 41_[+7(8.14e-06)]_5_[-4(2.02e-10)]_\ 12 chr19:44259548-44260048 1.76e-09 15_[+6(3.70e-15)]_59 chr1:150293606-150294106 7.66e-03 40_[+1(7.49e-06)]_45 chr8:143281438-143281938 3.53e-04 34_[-1(7.49e-06)]_5_[-1(5.13e-07)]_\ 31 chr12:48105899-48106399 6.78e-04 1_[+9(7.63e-05)]_7_[-1(9.58e-06)]_\ 68 chr12:49567884-49568384 1.42e-02 48_[-9(9.00e-06)]_22_[+1(8.37e-07)]_\ 6 chr7:93232066-93232566 2.54e-04 40_[+4(7.56e-10)]_34 chr19:38849854-38850354 7.61e-01 100 chr17:42154862-42155362 7.34e-03 70_[-7(2.46e-05)]_14 chr1:155934240-155934740 2.03e-02 15_[+1(2.71e-06)]_9_[-9(7.63e-05)]_\ 52 chr16:30650436-30650936 8.62e-02 20_[-1(2.94e-05)]_65 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: surya ********************************************************************************