Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCA
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTA
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GAGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATTGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTAG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GTTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCT
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 TAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 ACAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 TATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAAA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGAACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGTGGGGC
M2392_1.02 19 GTTGCCATGGCAACAGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCAAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGAA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCAGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 TGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTAGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACAGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACTGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTAG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 ATCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TTATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACAGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TATTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACTCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 ACAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACT
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 TGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATA
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TTCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATTAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 ACAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGACGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCTC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGTG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TTTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 AAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCACCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCTGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTTTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGATGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATACCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.314 C 0.186 G 0.186 T 0.314


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6309_1.02 IRF3 chr11 + 61154631 61154647 1.11e-07 0.0455 ggaaagagaaaagggaa
M6309_1.02 IRF3 chr6 - 133026984 133027000 1.83e-07 0.0455 GGAAAGAGAAAAGGAGA
M6309_1.02 IRF3 chr1 + 221331630 221331646 2.91e-07 0.0455 ggaaagtgaaactgtgg
M6309_1.02 IRF3 chr13 - 39631639 39631655 3.3e-07 0.0455 GGAAAGTGAAAAGAGAC
M6309_1.02 IRF3 chr7 + 44525117 44525133 4.64e-07 0.0512 gaaaagagaaaggggaa
M6309_1.02 IRF3 chr12 - 12424129 12424145 1.09e-06 0.1 AGAAAGAGAAAGGGAGA
M6309_1.02 IRF3 chr8 + 144742058 144742074 1.61e-06 0.126 gggaaccgaaacgacag
M6309_1.02 IRF3 chr8 - 70099720 70099736 1.84e-06 0.127 GAAAAGGGAAACCATAA
M6309_1.02 IRF3 chr17 - 17446193 17446209 2.76e-06 0.147 GGCAAGGGAAAATGAGA
M6309_1.02 IRF3 chr2 - 216771995 216772011 2.9e-06 0.147 GGAAAGAGGAACTGGGG
M6309_1.02 IRF3 chr13 + 27208670 27208686 2.95e-06 0.147 agaaagagaaaggggca
M6309_1.02 IRF3 chr15 - 31012702 31012718 3.2e-06 0.147 GAGAAGGGAAACTGGCA
M6309_1.02 IRF3 chr15 - 48345468 48345484 3.57e-06 0.152 GGAAGGAGAAAGGAGAA
M6309_1.02 IRF3 chr15 - 80517545 80517561 4.38e-06 0.161 AGAAAGAGAAAATGGAG
M6309_1.02 IRF3 chr3 + 138559278 138559294 4.38e-06 0.161 gaaaagagaaaatgagg
M6309_1.02 IRF3 chr13 - 20017569 20017585 4.72e-06 0.163 GGAAAGGAAAAAGAGGA
M6309_1.02 IRF3 chr10 - 24740922 24740938 5.41e-06 0.176 CAAAAGTGAAAATGAGA
M6309_1.02 IRF3 chr22 + 43857410 43857426 6.72e-06 0.176 gaaaacagaaaacagaa
M6309_1.02 IRF3 chr9 + 2972599 2972615 6.93e-06 0.176 agaaagagaaacagaaa
M6309_1.02 IRF3 chr18 + 62120205 62120221 7.06e-06 0.176 gggaaggggaaggggaa
M6309_1.02 IRF3 chr10 + 123629142 123629158 7.2e-06 0.176 ggaaagtgaagaggaaa
M6309_1.02 IRF3 chr19 - 11642924 11642940 7.27e-06 0.176 CGGAAGGGAAAGCAAAC
M6309_1.02 IRF3 chr10 + 59859738 59859754 8.26e-06 0.176 ggaaagagtaactgaag
M6309_1.02 IRF3 chr15 + 81921298 81921314 8.9e-06 0.176 ggaaaaagaaagaggaa
M6309_1.02 IRF3 chr2 - 85742508 85742524 8.94e-06 0.176 GAAAACAGAAAACAAAA
M6309_1.02 IRF3 chr17 + 73621845 73621861 1.04e-05 0.176 ggaaagaaaaaatgggg
M6309_1.02 IRF3 chr11 + 35730391 35730407 1.06e-05 0.176 gaaaaaggaaagtagag
M6309_1.02 IRF3 chr9 - 86572970 86572986 1.08e-05 0.176 GCAAAGAGAAAATGAAG
M6309_1.02 IRF3 chr10 + 21935537 21935553 1.13e-05 0.176 agaaacagaaaatgggg
M6309_1.02 IRF3 chr10 + 73333233 73333249 1.14e-05 0.176 gaaaaatgaaaacaaaa
M6309_1.02 IRF3 chr1 + 221331817 221331833 1.14e-05 0.176 gaaaacagaaatggaaa
M6309_1.02 IRF3 chr14 + 32209769 32209785 1.18e-05 0.176 ggaaacccaaaatagaa
M6309_1.02 IRF3 chr2 - 74967331 74967347 1.18e-05 0.176 AAAAACTGAAACTAAAA
M6309_1.02 IRF3 chr10 + 32787111 32787127 1.23e-05 0.176 gaaaagagaaaagagca
M6309_1.02 IRF3 chr9 + 112713019 112713035 1.24e-05 0.176 ggcaagcgagactggga
M6309_1.02 IRF3 chr6 + 149855217 149855233 1.24e-05 0.176 ggaatgtgaaaacaaat
M6309_1.02 IRF3 chr1 - 229685397 229685413 1.24e-05 0.176 GAAAAGGGAAAAAGGAG
M6309_1.02 IRF3 chr20 - 37524890 37524906 1.26e-05 0.176 CGAGAGGGAAACTGGAG
M6309_1.02 IRF3 chr18 + 62120211 62120227 1.29e-05 0.176 gggaaggggaaggggac
M6309_1.02 IRF3 chr13 + 52388007 52388023 1.31e-05 0.176 gaaaaccaaaaccaaac
M6309_1.02 IRF3 chr3 - 136281300 136281316 1.36e-05 0.176 GAAAAAAGAAAAGGAGA
M6309_1.02 IRF3 chr17 - 62531314 62531330 1.37e-05 0.176 GGGAACTGAAAGGCAAG
M6309_1.02 IRF3 chr7 - 128587089 128587105 1.37e-05 0.176 GGGAACTGAAAGGCAAG
M6309_1.02 IRF3 chr19 + 40567375 40567391 1.45e-05 0.18 GGAAGGAGAAATGGGAG
M6309_1.02 IRF3 chr7 + 44525123 44525139 1.47e-05 0.18 agaaaggggaagtgaga
M6309_1.02 IRF3 chr12 + 103918019 103918035 1.57e-05 0.188 ggaaggagaaaagaggg
M6309_1.02 IRF3 chr7 + 29906590 29906606 1.64e-05 0.189 ggaaagaaaaagggtaa
M6309_1.02 IRF3 chr5 + 172760286 172760302 1.64e-05 0.189 ggcaaatgaaaggagaa
M6309_1.02 IRF3 chr18 - 22283971 22283987 1.86e-05 0.197 GCAAATCGAAACCACAA
M6309_1.02 IRF3 chr1 + 236779333 236779349 1.92e-05 0.197 gagaagggaaaagaggg
M6309_1.02 IRF3 chr5 - 115345386 115345402 1.97e-05 0.197 AGAAAGAGAAAGTCAGG
M6309_1.02 IRF3 chr15 - 68444573 68444589 1.99e-05 0.197 GGAGAGAGAAAATGAGA
M6309_1.02 IRF3 chr20 - 46660567 46660583 2e-05 0.197 GAAAAGTGAAAGATAAA
M6309_1.02 IRF3 chr16 + 390059 390075 2.02e-05 0.197 gggaagacaaactgaga
M6309_1.02 IRF3 chr20 + 4578752 4578768 2.04e-05 0.197 ggaaagcaaaacaaagt
M6309_1.02 IRF3 chr9 + 125611409 125611425 2.12e-05 0.197 agaaagagaaattaaga
M6309_1.02 IRF3 chr21 - 37503210 37503226 2.14e-05 0.197 GAAAGACGAAAGCAGAA
M6309_1.02 IRF3 chr22 + 43857391 43857407 2.21e-05 0.197 ggaaagaaaaaagaggg
M6309_1.02 IRF3 chr14 - 24396421 24396437 2.23e-05 0.197 GGAATGAGAAACCTCCA
M6309_1.02 IRF3 chr12 - 823476 823492 2.29e-05 0.197 AGGAAGTGAAACTGTAC
M6309_1.02 IRF3 chr15 + 101623620 101623636 2.31e-05 0.197 ggaaaaagaaaacacca
M6309_1.02 IRF3 chr10 + 83357126 83357142 2.33e-05 0.197 agaaagggaaacaagta
M6309_1.02 IRF3 chr12 - 12424135 12424151 2.36e-05 0.197 GAAAACAGAAAGAGAAA
M6309_1.02 IRF3 chr20 - 41198781 41198797 2.41e-05 0.197 AGAAAAAGAAAAGGGAC
M6309_1.02 IRF3 chr20 - 51033785 51033801 2.43e-05 0.197 GGAAACCCAAAACAGCA
M6309_1.02 IRF3 chr4 - 42379283 42379299 2.45e-05 0.197 AGAAAGAAAAACTAGAA
M6309_1.02 IRF3 chr15 - 69223659 69223675 2.47e-05 0.197 GAAAAGAGAAAGAGGCA
M6309_1.02 IRF3 chr8 + 144742206 144742222 2.48e-05 0.197 ggaaaaggaaaaaaaaa
M6309_1.02 IRF3 chr6 + 159334121 159334137 2.48e-05 0.197 gaaaaaggaaaagaagc
M6309_1.02 IRF3 chr14 - 99975439 99975455 2.52e-05 0.197 GGTAAGAGAAAATGGGG
M6309_1.02 IRF3 chr2 - 236548057 236548073 2.54e-05 0.197 GGAAGGAGAAATGAAAA
M6309_1.02 IRF3 chr8 + 49889986 49890002 2.61e-05 0.198 gggaacagaaagagaaa
M6309_1.02 IRF3 chr20 - 2219793 2219809 2.76e-05 0.198 CCAAAGAGAAACCCAAA
M6309_1.02 IRF3 chr19 - 29936745 29936761 2.83e-05 0.198 GAAAAGGAAAAATGAAC
M6309_1.02 IRF3 chr2 - 216771962 216771978 2.85e-05 0.198 GAAAAGAGAAAGTTGCT
M6309_1.02 IRF3 chr3 + 31655064 31655080 3.09e-05 0.198 aaaaagagaaagggata
M6309_1.02 IRF3 chr8 + 144742200 144742216 3.09e-05 0.198 tgaatgggaaaaggaaa
M6309_1.02 IRF3 chr11 + 35730240 35730256 3.12e-05 0.198 gcaaaccgaaagaaaga
M6309_1.02 IRF3 chr17 + 683122 683138 3.13e-05 0.198 gaaaaaagaaaagaaaa
M6309_1.02 IRF3 chr18 + 62119873 62119889 3.13e-05 0.198 gaaaaaagaaaagaaaa
M6309_1.02 IRF3 chr16 + 2804148 2804164 3.19e-05 0.198 agatagagaaaccgagt
M6309_1.02 IRF3 chr10 - 48412280 48412296 3.26e-05 0.198 TGAAAGCGAAAGACAAA
M6309_1.02 IRF3 chr22 + 42013366 42013382 3.27e-05 0.198 caaaagtgaaactccat
M6309_1.02 IRF3 chr18 - 2687722 2687738 3.29e-05 0.198 AGAAAAGAAAACTGAAA
M6309_1.02 IRF3 chr1 + 235067946 235067962 3.34e-05 0.198 GGGAGAGGAAAGGGAGA
M6309_1.02 IRF3 chr5 - 140767580 140767596 3.34e-05 0.198 GGAAACCGCAAAGAAAC
M6309_1.02 IRF3 chr10 - 104202564 104202580 3.36e-05 0.198 GAAAAGCAAAAGGGTAG
M6309_1.02 IRF3 chr8 + 135574622 135574638 3.45e-05 0.198 GGATAAGGAAAACAGGA
M6309_1.02 IRF3 chr10 + 29166712 29166728 3.61e-05 0.198 aggaagagaaaatgaag
M6309_1.02 IRF3 chr20 + 3640517 3640533 3.63e-05 0.198 agaaagggaaggcagga
M6309_1.02 IRF3 chr10 - 26024397 26024413 3.65e-05 0.198 AAGAAGCGAAACCTAAT
M6309_1.02 IRF3 chr7 - 37821047 37821063 3.65e-05 0.198 GAAAAAAGAAAATAAAA
M6309_1.02 IRF3 chr14 - 102639406 102639422 3.65e-05 0.198 GGGAAGGGAAGGGGAGG
M6309_1.02 IRF3 chr16 - 53151178 53151194 3.76e-05 0.198 GGAAAAGAAAAAGAAAA
M6309_1.02 IRF3 chr8 - 94001154 94001170 3.76e-05 0.198 AAAAAGAGAAAAGAAAA
M6309_1.02 IRF3 chr19 - 39940550 39940566 3.79e-05 0.198 AAAAAGAGAAACAGAAA
M6309_1.02 IRF3 chr2 - 120192311 120192327 3.84e-05 0.198 GGGAAGAAAAAGTAGAA
M6309_1.02 IRF3 chr6 + 25205758 25205774 3.89e-05 0.198 agaaagagatagtgaga
M6309_1.02 IRF3 chr1 + 41078432 41078448 3.89e-05 0.198 agaaaacgataccaaaa
M6309_1.02 IRF3 chr7 - 45060630 45060646 3.97e-05 0.198 GCAAAGGGAAAAAAGAA
M6309_1.02 IRF3 chr3 - 15066741 15066757 3.99e-05 0.198 AGAAAGAGAAAAGAGTG
M6309_1.02 IRF3 chr15 - 72437996 72438012 4.05e-05 0.198 GGAAACCAAAAACAATG
M6309_1.02 IRF3 chr20 - 38116900 38116916 4.11e-05 0.198 GGAAAGTGATAAGAATA
M6309_1.02 IRF3 chr13 - 45472516 45472532 4.11e-05 0.198 GGAAAATAAAAACTGAA
M6309_1.02 IRF3 chr4 - 153288675 153288691 4.11e-05 0.198 GAAGAGAGAAAGGGAAA
M6309_1.02 IRF3 chr6 + 18049262 18049278 4.13e-05 0.198 gaaaagagaaaaaagga
M6309_1.02 IRF3 chr16 + 14223692 14223708 4.14e-05 0.198 gaaaagtgaacagagac
M6309_1.02 IRF3 chr20 - 4352734 4352750 4.14e-05 0.198 GAAAAGTGAACAGAGAC
M6309_1.02 IRF3 chr22 + 21890680 21890696 4.2e-05 0.198 agaaagagaaaaagggg
M6309_1.02 IRF3 chr18 + 12564983 12564999 4.23e-05 0.198 agaaaaagaaaagaaaa
M6309_1.02 IRF3 chr1 + 114988095 114988111 4.23e-05 0.198 agaaaaagaaaagaaaa
M6309_1.02 IRF3 chr20 - 46890657 46890673 4.25e-05 0.198 GGAAACAGGAAAGAAAA
M6309_1.02 IRF3 chr19 + 19034350 19034366 4.29e-05 0.198 gggaagaggaacttgga
M6309_1.02 IRF3 chr12 - 1676344 1676360 4.32e-05 0.198 AGAAGGAGAAAAGGGAG
M6309_1.02 IRF3 chr5 - 157592018 157592034 4.34e-05 0.198 AAAAAGAGAAAGGAGCA
M6309_1.02 IRF3 chrX + 134313770 134313786 4.36e-05 0.198 tgaaagcaaaaacagag
M6309_1.02 IRF3 chrX + 134313631 134313647 4.38e-05 0.198 gagaagagaaaggacag
M6309_1.02 IRF3 chr15 + 101623615 101623631 4.49e-05 0.198 agaaaggaaaaagaaaa
M6309_1.02 IRF3 chr20 - 46660827 46660843 4.53e-05 0.198 GAGAAGGAAAAGTGAAA
M6309_1.02 IRF3 chr6 - 139850829 139850845 4.55e-05 0.198 AGAAAGAGAAAGATGGA
M6309_1.02 IRF3 chr14 - 68801812 68801828 4.57e-05 0.198 AGGAACAGAAAGGAAAA
M6309_1.02 IRF3 chr15 - 67277009 67277025 4.6e-05 0.198 TCAAAGTGAAACGCAAA
M6309_1.02 IRF3 chr22 + 49991353 49991369 4.78e-05 0.198 agaaatagaaaagggaa
M6309_1.02 IRF3 chr22 - 22300928 22300944 4.78e-05 0.198 AGAAGCTGAAACCTGAT
M6309_1.02 IRF3 chr1 - 51725127 51725143 4.78e-05 0.198 GAGAAGCAAAAGGAAAA
M6309_1.02 IRF3 chr17 + 17446389 17446405 4.8e-05 0.198 GGAAAGTCAAAGCCATA
M6309_1.02 IRF3 chr3 - 46648197 46648213 4.8e-05 0.198 CAAAAGTGAAAACAACG
M6309_1.02 IRF3 chr1 - 206912604 206912620 4.8e-05 0.198 GGAAACCAAGACTGGGC
M6309_1.02 IRF3 chr9 - 97403741 97403757 4.9e-05 0.198 GAAAACAGAAAAAGAGA
M6309_1.02 IRF3 chr10 + 123629344 123629360 4.92e-05 0.198 tgaaaatgaaaacaaag
M6309_1.02 IRF3 chr9 + 26937952 26937968 5.07e-05 0.198 gagaggggaaagggagc
M6309_1.02 IRF3 chr19 - 9507248 9507264 5.09e-05 0.198 AAAAAGAGAAACTCAGG
M6309_1.02 IRF3 chr6 - 134959609 134959625 5.17e-05 0.198 GGAAAACAAAAATAGCA
M6309_1.02 IRF3 chr1 - 240094068 240094084 5.22e-05 0.198 GAAAAATGAAAGAGAAG
M6309_1.02 IRF3 chr5 - 174785532 174785548 5.24e-05 0.198 AGAAAGATAAAGGGAAA
M6309_1.02 IRF3 chr4 + 156732993 156733009 5.28e-05 0.198 tgaaggagaaagcaaga
M6309_1.02 IRF3 chr10 - 35257823 35257839 5.37e-05 0.198 AGAAGGGGAAAGCCAAG
M6309_1.02 IRF3 chr9 - 133096312 133096328 5.44e-05 0.198 AGAAAGAAAAAGGAAGA
M6309_1.02 IRF3 chr1 - 206912865 206912881 5.44e-05 0.198 GCAATGTGAAAATGGAG
M6309_1.02 IRF3 chr5 + 67702061 67702077 5.58e-05 0.198 agaaattgaaaatgcaa
M6309_1.02 IRF3 chr19 - 39940544 39940560 5.58e-05 0.198 AGAAACAGAAAATGACT
M6309_1.02 IRF3 chr15 + 60244952 60244968 5.6e-05 0.198 ggaaaaggaagacagaa
M6309_1.02 IRF3 chr14 + 99821709 99821725 5.62e-05 0.198 ggaaggggacaccgGCC
M6309_1.02 IRF3 chr10 - 44405136 44405152 5.65e-05 0.198 GAAAACTAAAAGCAAAG
M6309_1.02 IRF3 chr10 + 32787104 32787120 5.69e-05 0.198 agaaggagaaaagagaa
M6309_1.02 IRF3 chr10 + 42533134 42533150 5.71e-05 0.198 gaaaagccaaaattaaa
M6309_1.02 IRF3 chr19 + 44255840 44255856 5.74e-05 0.198 ggagagagaaaggagta
M6309_1.02 IRF3 chr8 - 94001180 94001196 5.76e-05 0.198 CAAAAGCGAAACTCCTT
M6309_1.02 IRF3 chr6 + 1828235 1828251 5.81e-05 0.198 agaaacagaaagaagaa
M6309_1.02 IRF3 chr13 - 25668429 25668445 5.81e-05 0.198 GAAAACAGAAAGAAAGA
M6309_1.02 IRF3 chr2 - 201841037 201841053 5.81e-05 0.198 GGAAATGGAAAATATGA
M6309_1.02 IRF3 chr22 + 21890674 21890690 5.83e-05 0.198 gagaagagaaagagaaa
M6309_1.02 IRF3 chr17 - 62530881 62530897 6e-05 0.198 AAAAAAAGAAAGCGAAC
M6309_1.02 IRF3 chr10 - 104202474 104202490 6.03e-05 0.198 GAGAGGAGAAAGTGGGA
M6309_1.02 IRF3 chr9 - 133096318 133096334 6.05e-05 0.198 GGGAACAGAAAGAAAAA
M6309_1.02 IRF3 chr7 + 44525030 44525046 6.08e-05 0.198 cgaaagtgaacagagca
M6309_1.02 IRF3 chr18 + 12564845 12564861 6.1e-05 0.198 caaaactgaaaagcaaa
M6309_1.02 IRF3 chr18 + 62120206 62120222 6.1e-05 0.198 ggaaggggaaggggaag
M6309_1.02 IRF3 chr19 - 39940457 39940473 6.1e-05 0.198 GAGAAAAGAAAGTGGGG
M6309_1.02 IRF3 chrX + 134313548 134313564 6.13e-05 0.198 tgaaaaagaaaatgaac
M6309_1.02 IRF3 chr10 - 118537704 118537720 6.13e-05 0.198 GAAAGCAGAAAATGAGA
M6309_1.02 IRF3 chr9 - 113926461 113926477 6.15e-05 0.198 AGAAAGAAAAAACAGAA
M6309_1.02 IRF3 chr12 + 94813471 94813487 6.18e-05 0.198 gaaaacccaaagcaaat
M6309_1.02 IRF3 chr15 - 69777604 69777620 6.2e-05 0.198 GAAGAGAGAAAAGGGAA
M6309_1.02 IRF3 chr20 + 41479542 41479558 6.25e-05 0.198 aaaaagtgaacctaaaa
M6309_1.02 IRF3 chr16 + 72673328 72673344 6.28e-05 0.198 agaaagcaaaaggagct
M6309_1.02 IRF3 chr18 + 6820495 6820511 6.31e-05 0.198 tggaagagaaaatggat
M6309_1.02 IRF3 chr6 - 149855133 149855149 6.31e-05 0.198 GGAAAGGGTTAGTGGAA
M6309_1.02 IRF3 chr8 + 30038083 30038099 6.33e-05 0.198 agaaaccaaaaacacaa
M6309_1.02 IRF3 chr2 - 236548064 236548080 6.33e-05 0.198 GGAAATGGGAAGGAGAA
M6309_1.02 IRF3 chr10 + 42545098 42545114 6.44e-05 0.198 gaaaagggaaccaaaaa
M6309_1.02 IRF3 chr10 - 38103122 38103138 6.44e-05 0.198 GAAAAGGGAACCAAAAA
M6309_1.02 IRF3 chr10 + 42545097 42545113 6.46e-05 0.198 agaaaagggaaccaaaa
M6309_1.02 IRF3 chr10 - 38103123 38103139 6.46e-05 0.198 AGAAAAGGGAACCAAAA
M6309_1.02 IRF3 chr9 + 13629451 13629467 6.49e-05 0.198 gcaaatggaaaacagaa
M6309_1.02 IRF3 chr4 + 137633225 137633241 6.49e-05 0.198 gcaaatggaaaacagaa
M6309_1.02 IRF3 chr1 + 220256552 220256568 6.49e-05 0.198 gcaaatggaaaacagaa
M6309_1.02 IRF3 chr19 - 46161647 46161663 6.49e-05 0.198 GCAAATGGAAAACAGAA
M6309_1.02 IRF3 chr7 + 29906579 29906595 6.51e-05 0.198 agaaggagaaaggaaag
M6309_1.02 IRF3 chr6 + 126383588 126383604 6.51e-05 0.198 ggaaatggaaaaaagaa
M6309_1.02 IRF3 chr10 + 21935433 21935449 6.54e-05 0.198 gggagcagaaaggaaaa
M6309_1.02 IRF3 chr2 + 144749161 144749177 6.57e-05 0.198 tgaaagagaaaagagtc
M6309_1.02 IRF3 chr8 - 53889811 53889827 6.62e-05 0.198 GGAAAGTCAAAAGATAA
M6309_1.02 IRF3 chr1 + 1317503 1317519 6.68e-05 0.198 ggaaacaggaaagacaa
M6309_1.02 IRF3 chr13 - 20017651 20017667 6.68e-05 0.198 GAAAAGTAAAACAGAGC
M6309_1.02 IRF3 chr10 - 6356696 6356712 6.76e-05 0.198 AGAAACAAAAACTAAAA
M6309_1.02 IRF3 chr21 + 32167469 32167485 6.81e-05 0.198 caaaactgaaattaaaa
M6309_1.02 IRF3 chr13 - 20017575 20017591 6.81e-05 0.198 CCAAAAGGAAAGGAAAA
M6309_1.02 IRF3 chr1 - 179661171 179661187 6.81e-05 0.198 CAAAACCCAAACTGGAT
M6309_1.02 IRF3 chr17 - 19620032 19620048 6.92e-05 0.198 GAAAAGTGAACACTGAT
M6309_1.02 IRF3 chr20 + 41479375 41479391 6.95e-05 0.198 gaaaaccaaaaattaaa
M6309_1.02 IRF3 chr6 - 12104388 12104404 7.01e-05 0.198 AGAGAGAGAAACGAAGA
M6309_1.02 IRF3 chr10 - 69272685 69272701 7.04e-05 0.198 AGAAAGAGAAACCCTTA
M6309_1.02 IRF3 chr11 + 130679289 130679305 7.07e-05 0.198 aaaaagtgaaaagagcc
M6309_1.02 IRF3 chr9 + 112713013 112713029 7.1e-05 0.198 cgaaaaggcaagcgaga
M6309_1.02 IRF3 chr1 - 86933360 86933376 7.1e-05 0.198 CCAAACTGAAAGGCAAA
M6309_1.02 IRF3 chrX - 46989791 46989807 7.15e-05 0.198 GGAAAAAGAAGGTGGAG
M6309_1.02 IRF3 chr14 - 68801788 68801804 7.15e-05 0.198 GGAAAGTGAAGAGAGCC
M6309_1.02 IRF3 chr7 - 155649072 155649088 7.15e-05 0.198 GGAAAAAGAACTGGAGA
M6309_1.02 IRF3 chr5 - 138817514 138817530 7.21e-05 0.199 AGAAGGAGAAAAGAAAA
M6309_1.02 IRF3 chr3 - 38387238 38387254 7.27e-05 0.199 GGAAAGGAAAGAGGGAA
M6309_1.02 IRF3 chr16 - 2357687 2357703 7.3e-05 0.199 GGAAAAAAAAAATGAAG
M6309_1.02 IRF3 chr12 + 94813209 94813225 7.36e-05 0.2 agaaacagaaagaaaaa
M6309_1.02 IRF3 chr18 + 12564878 12564894 7.39e-05 0.2 gaaaaacaaaaacaaaa
M6309_1.02 IRF3 chr9 - 79847146 79847162 7.42e-05 0.2 GAAAAAGGAACATGAAA
M6309_1.02 IRF3 chr20 + 50471612 50471628 7.51e-05 0.201 gaaaagtgaaacaatat
M6309_1.02 IRF3 chr18 - 22283849 22283865 7.6e-05 0.202 GGGAAGGTAAACTTAGC
M6309_1.02 IRF3 chr6 + 12649308 12649324 7.63e-05 0.202 ggaaaagtaaAGCTGAG
M6309_1.02 IRF3 chr15 - 67276609 67276625 7.66e-05 0.202 GGAAAGAAAAAACCCAC
M6309_1.02 IRF3 chr19 - 33898391 33898407 7.84e-05 0.206 AGAAGAGGAAAAGGAGA
M6309_1.02 IRF3 chr1 + 39857576 39857592 7.91e-05 0.207 CGAAACCCAAAACAAAG
M6309_1.02 IRF3 chr12 - 12424142 12424158 8.07e-05 0.21 CCAAAAGGAAAACAGAA
M6309_1.02 IRF3 chr10 + 3481590 3481606 8.1e-05 0.21 ggcagctgaaacccaga
M6309_1.02 IRF3 chr3 + 180790019 180790035 8.17e-05 0.21 agaaaaggaaagaaaaa
M6309_1.02 IRF3 chr21 - 46616913 46616929 8.2e-05 0.21 AGAAAGGAAAAATGATA
M6309_1.02 IRF3 chr15 - 31012709 31012725 8.24e-05 0.21 AGAAAGAGAGAAGGGAA
M6309_1.02 IRF3 chr19 + 11221323 11221339 8.3e-05 0.211 gaagagtgaaaatgagg
M6309_1.02 IRF3 chr11 + 28339857 28339873 8.4e-05 0.211 GGAAAGGGGaactattc
M6309_1.02 IRF3 chr5 - 72812076 72812092 8.4e-05 0.211 GAAAAGAAAAAGGGTGA
M6309_1.02 IRF3 chr14 + 64864455 64864471 8.5e-05 0.211 gaaaaaTgaaagaggta
M6309_1.02 IRF3 chr20 - 4352623 4352639 8.53e-05 0.211 GTAAAAAGAAAAGAGAA
M6309_1.02 IRF3 chr19 - 29936752 29936768 8.57e-05 0.211 AAAAAAAGAAAAGGAAA
M6309_1.02 IRF3 chr13 + 38325704 38325720 8.6e-05 0.211 agaaagccaaaggcaag
M6309_1.02 IRF3 chr9 - 79847140 79847156 8.6e-05 0.211 GGAACATGAAAGCAGCA
M6309_1.02 IRF3 chr14 - 68801719 68801735 8.63e-05 0.211 AGAGAGAGAAAAGGGGA
M6309_1.02 IRF3 chr12 + 50800071 50800087 8.81e-05 0.211 tgaaagctaaagttaaa
M6309_1.02 IRF3 chr16 - 53151184 53151200 8.81e-05 0.211 GGGGAGGGAAAAGAAAA
M6309_1.02 IRF3 chr19 - 4576609 4576625 8.88e-05 0.211 AGAAAGGGCAAGGTAAA
M6309_1.02 IRF3 chr10 + 32787043 32787059 8.91e-05 0.211 ggaaagggaagggacct
M6309_1.02 IRF3 chr15 + 81921304 81921320 8.95e-05 0.211 agaaagaggaaatgggg
M6309_1.02 IRF3 chr5 - 119521465 119521481 8.95e-05 0.211 GAAAAGCAAAACAGTGA
M6309_1.02 IRF3 chr2 + 143870842 143870858 8.99e-05 0.211 gaagagagaaaggggca
M6309_1.02 IRF3 chr8 + 144741758 144741774 8.99e-05 0.211 ggaaagagtaagtcaac
M6309_1.02 IRF3 chr15 + 76683978 76683994 9.02e-05 0.211 gcaaaggaaaaataaga
M6309_1.02 IRF3 chr20 - 46660821 46660837 9.02e-05 0.211 GAAAAGTGAAAAAAATA
M6309_1.02 IRF3 chr7 + 114033590 114033606 9.06e-05 0.211 agaagcagaaaagggag
M6309_1.02 IRF3 chr3 + 138559271 138559287 9.06e-05 0.211 gcaaattgaaaagagaa
M6309_1.02 IRF3 chr5 - 79407875 79407891 9.17e-05 0.212 AGAAAGAGAAACAATGA
M6309_1.02 IRF3 chr13 - 20017652 20017668 9.2e-05 0.212 GGAAAAGTAAAACAGAG
M6309_1.02 IRF3 chr10 + 62699345 62699361 9.28e-05 0.213 gaaaacagaaactcctg
M6309_1.02 IRF3 chr18 + 12564830 12564846 9.35e-05 0.213 GAGAACTgaaagctcca
M6309_1.02 IRF3 chr13 - 20017373 20017389 9.39e-05 0.213 GGCAAGAGAAATGACAC
M6309_1.02 IRF3 chr2 - 160754055 160754071 9.46e-05 0.213 GCATAGAGAAAGGAGAA
M6309_1.02 IRF3 chr13 + 27896995 27897011 9.5e-05 0.213 gaaaagtaaaattaaaa
M6309_1.02 IRF3 chr1 - 109988907 109988923 9.5e-05 0.213 AAAAGGAGAAACCTGGA
M6309_1.02 IRF3 chr13 - 20016922 20016938 9.57e-05 0.213 AAGAAGAGAAAGGGGCA
M6309_1.02 IRF3 chr10 - 51924317 51924333 9.57e-05 0.213 GAAAAAAGAAAACCAAC
M6309_1.02 IRF3 chr11 + 130679360 130679376 9.69e-05 0.213 agaaggagaaaagagag
M6309_1.02 IRF3 chr15 - 76460697 76460713 9.69e-05 0.213 GGAAAGAGAATTTAAAA
M6309_1.02 IRF3 chr7 - 155649094 155649110 9.72e-05 0.213 AGAAGGAGAAAACAAAG
M6309_1.02 IRF3 chr18 + 62120212 62120228 9.76e-05 0.213 ggaaggggaaggggaca
M6309_1.02 IRF3 chr13 - 99782816 99782832 9.76e-05 0.213 GAAAGGAGAAACAGAGG
M6309_1.02 IRF3 chr19 + 6029943 6029959 9.84e-05 0.213 ggaaagaaaaaagaatg
M6309_1.02 IRF3 chr7 + 44525006 44525022 9.84e-05 0.213 aagaagagaaaggaaaa
M6309_1.02 IRF3 chr18 - 2687716 2687732 9.84e-05 0.213 GAAAACTGAAAATATCA
M6309_1.02 IRF3 chr3 - 53920009 53920025 9.88e-05 0.213 GGAAAGAAGAAGGAGAA
M6309_1.02 IRF3 chr16 + 72673079 72673095 9.92e-05 0.213 cggaagggaaaaagaat
M6309_1.02 IRF3 chr10 + 91473211 91473227 9.95e-05 0.213 tcaaagggaaaagacaa
M6309_1.02 IRF3 chr2 - 138579563 138579579 9.99e-05 0.213 CGAAAAAAAAACCAGAG

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_37 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M6309_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_37 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF558.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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