Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATTGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 TATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAAA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACT
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCTGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGATGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATACCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.287 C 0.213 G 0.213 T 0.287


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M4612_1.02 CTCFL chr1 + 27725755 27725769 2.37e-08 0.0134 CCTCCAGGTGGCGCC
M4612_1.02 CTCFL chr19 + 46029061 46029075 6.12e-08 0.0173 CCACCAGAGGGCGCG
M4612_1.02 CTCFL chr21 + 45555076 45555090 1.57e-07 0.0256 CCACCAGGGGGCGAG
M4612_1.02 CTCFL chr12 + 56079081 56079095 1.82e-07 0.0256 GCACCAGGCGGCGCC
M4612_1.02 CTCFL chr3 + 150410379 150410393 3.55e-07 0.0389 CCTGCAGTGGGCGCC
M4612_1.02 CTCFL chr21 + 45555219 45555233 4.14e-07 0.0389 gcgccggggggcggc
M4612_1.02 CTCFL chr21 + 45555209 45555223 6.12e-07 0.0435 gcggtggggggcgcc
M4612_1.02 CTCFL chr10 + 116682504 116682518 6.6e-07 0.0435 CCACAAGGTGGCGCG
M4612_1.02 CTCFL chr16 - 3028372 3028386 6.94e-07 0.0435 CCAGAAGGTGGCGCT
M4612_1.02 CTCFL chr6 - 44247900 44247914 1.04e-06 0.0584 CGAGGAGGGGGCGCC
M4612_1.02 CTCFL chr19 + 2376114 2376128 1.38e-06 0.065 cctcctgggggctcc
M4612_1.02 CTCFL chr1 + 163321951 163321965 1.54e-06 0.065 CCAGTAGGAGGCGGC
M4612_1.02 CTCFL chr3 + 150410042 150410056 1.61e-06 0.065 CATGCAGGGGGCGCA
M4612_1.02 CTCFL chr11 - 62108179 62108193 1.61e-06 0.065 CCACTAGGGGGCAGT
M4612_1.02 CTCFL chr6 - 147508592 147508606 2.72e-06 0.102 GCGGGAGGGGGCGGA
M4612_1.02 CTCFL chr1 + 26111752 26111766 3.04e-06 0.107 CCGGAGGGGGGCGGG
M4612_1.02 CTCFL chr6 + 11537470 11537484 3.22e-06 0.107 CCCGGCGGTGGCGCC
M4612_1.02 CTCFL chr11 - 116836177 116836191 4.06e-06 0.12 CCAGAAGGTGGAGCC
M4612_1.02 CTCFL chr17 - 68020072 68020086 4.17e-06 0.12 GCCGCTGGGGGCGGC
M4612_1.02 CTCFL chr1 - 27725764 27725778 4.34e-06 0.12 TCACGCGGGGGCGCC
M4612_1.02 CTCFL chr10 - 90572168 90572182 4.96e-06 0.12 CCACCAGGGGTCTCA
M4612_1.02 CTCFL chr21 + 45555222 45555236 5.24e-06 0.12 ccggggggcggcgca
M4612_1.02 CTCFL chr2 - 30225322 30225336 5.38e-06 0.12 CCTCCAGGGGCAGCT
M4612_1.02 CTCFL chr5 + 138036188 138036202 5.41e-06 0.12 ccagcaggtggcagt
M4612_1.02 CTCFL chr1 - 26111591 26111605 5.84e-06 0.12 CCCGCAGGGGTGGCC
M4612_1.02 CTCFL chr18 + 390149 390163 6.17e-06 0.12 CCAGCAGGGGGCTAG
M4612_1.02 CTCFL chr5 + 128838310 128838324 6.55e-06 0.12 actccagagggcacc
M4612_1.02 CTCFL chr6 - 11537348 11537362 6.7e-06 0.12 CCGGCTGGGTGCGCG
M4612_1.02 CTCFL chr17 - 50072004 50072018 6.78e-06 0.12 GTAGTAGGGGGCGCC
M4612_1.02 CTCFL chr3 - 150410004 150410018 6.89e-06 0.12 CCCTCCGGTGGCGCC
M4612_1.02 CTCFL chr19 + 57191547 57191561 7.03e-06 0.12 CCGGTCGGGGCCGCT
M4612_1.02 CTCFL chr7 + 107744323 107744337 7.18e-06 0.12 CCGGCAGGGGCCTGC
M4612_1.02 CTCFL chr5 - 112711170 112711184 7.36e-06 0.12 CCAGGAGGTGGAGCT
M4612_1.02 CTCFL chr6 - 159399104 159399118 7.42e-06 0.12 GCTGCAGAGGGCCCC
M4612_1.02 CTCFL chr21 + 45554865 45554879 7.73e-06 0.12 CCAGCAGCGGGCCCT
M4612_1.02 CTCFL chr3 - 150410388 150410402 7.83e-06 0.12 CGCCGCGGGGGCGCC
M4612_1.02 CTCFL chr21 + 36893712 36893726 7.86e-06 0.12 ctgacagggggcggg
M4612_1.02 CTCFL chr18 + 6729672 6729686 8.27e-06 0.123 CTGCCCGGGGGCCCC
M4612_1.02 CTCFL chr12 + 56157930 56157944 8.65e-06 0.125 CCACCAGGAGGCCAC
M4612_1.02 CTCFL chr3 - 150410180 150410194 9.81e-06 0.138 CCTACGGGTGGCGGC
M4612_1.02 CTCFL chr21 + 45555231 45555245 1.06e-05 0.145 ggcgcagggggcggc
M4612_1.02 CTCFL chr21 + 45555145 45555159 1.24e-05 0.161 ggtgcagggggcggc
M4612_1.02 CTCFL chr21 + 45555178 45555192 1.24e-05 0.161 ggtgcagggggcggc
M4612_1.02 CTCFL chr11 - 68839420 68839434 1.26e-05 0.161 CAGCCTGGGGGCGGG
M4612_1.02 CTCFL chr5 + 82312509 82312523 1.31e-05 0.164 ACAAAAGAGGGCGCC
M4612_1.02 CTCFL chr16 - 31459794 31459808 1.34e-05 0.164 CGACGAGGGGGCGGA
M4612_1.02 CTCFL chr8 + 653781 653795 1.43e-05 0.171 ccgcagggtggcact
M4612_1.02 CTCFL chr5 + 138036122 138036136 1.54e-05 0.176 accctagggggtgcc
M4612_1.02 CTCFL chr12 + 56079137 56079151 1.55e-05 0.176 CCCGCAGGGAGCCCG
M4612_1.02 CTCFL chr17 - 14417573 14417587 1.56e-05 0.176 CTGCCAGGTGGAGCT
M4612_1.02 CTCFL chr18 - 47548038 47548052 1.64e-05 0.179 CCCCCAGGTGAAGCC
M4612_1.02 CTCFL chrX + 73958279 73958293 1.72e-05 0.179 ccgggaggtggaggt
M4612_1.02 CTCFL chr5 - 10288821 10288835 1.73e-05 0.179 CCCCCAGGTGCCTCC
M4612_1.02 CTCFL chr16 - 31459723 31459737 1.78e-05 0.179 CGAGTAGGGGGCGGA
M4612_1.02 CTCFL chrX + 155881467 155881481 1.85e-05 0.179 CCTGCGGGAGGCGGG
M4612_1.02 CTCFL chrX + 135021873 135021887 1.87e-05 0.179 GCACGAGAGGGCGGA
M4612_1.02 CTCFL chr21 - 26845280 26845294 1.9e-05 0.179 CCGAAGAGGGGCGCC
M4612_1.02 CTCFL chr11 - 116836147 116836161 1.98e-05 0.179 CCAAGAGGGCGCGCG
M4612_1.02 CTCFL chr12 - 56079087 56079101 1.99e-05 0.179 CCGACCGGCGCCGCC
M4612_1.02 CTCFL chr9 + 21581394 21581408 2.02e-05 0.179 ccgggaggcggaggt
M4612_1.02 CTCFL chr21 + 26845232 26845246 2.02e-05 0.179 GCGCTCTGGGGCGCC
M4612_1.02 CTCFL chr6 - 125119027 125119041 2.02e-05 0.179 CCGGGAGGCGGAGGT
M4612_1.02 CTCFL chr21 + 45555133 45555147 2.05e-05 0.179 GAcgcagggggcggt
M4612_1.02 CTCFL chr19 - 2376110 2376124 2.12e-05 0.179 CCCCCAGGAGGGACC
M4612_1.02 CTCFL chr1 + 114716744 114716758 2.15e-05 0.179 CCACCAAGGAGCGGC
M4612_1.02 CTCFL chr3 + 150410288 150410302 2.15e-05 0.179 GCCCCAGGGAGCGGG
M4612_1.02 CTCFL chr11 + 68839364 68839378 2.16e-05 0.179 GCCCCGGGCGGCGTC
M4612_1.02 CTCFL chr3 + 150410187 150410201 2.21e-05 0.179 CCCGTAGGTGGGGCT
M4612_1.02 CTCFL chr21 + 45555166 45555180 2.3e-05 0.179 ggcgcagggggcggt
M4612_1.02 CTCFL chr21 + 45555199 45555213 2.3e-05 0.179 ggcgcagggggcggt
M4612_1.02 CTCFL chr7 - 121392096 121392110 2.31e-05 0.179 CCACCAGGGGAATCC
M4612_1.02 CTCFL chr10 + 22003801 22003815 2.32e-05 0.179 CGGGAAGGGGGCGTG
M4612_1.02 CTCFL chr2 - 232550797 232550811 2.32e-05 0.179 CCCAGCGGGGGCGGG
M4612_1.02 CTCFL chr9 - 27573537 27573551 2.35e-05 0.179 GCGCTAGGGGCCGGG
M4612_1.02 CTCFL chr6 - 11537290 11537304 2.4e-05 0.18 GCTGCAGGGGCAGCC
M4612_1.02 CTCFL chr10 - 12596352 12596366 2.42e-05 0.18 CCGCTAGCTGGAGCC
M4612_1.02 CTCFL chr1 + 26111799 26111813 2.47e-05 0.18 CCAcgggggcgcgcg
M4612_1.02 CTCFL chr19 - 46029070 46029084 2.54e-05 0.18 CGGGGAGGGCGCGCC
M4612_1.02 CTCFL chr13 + 36619356 36619370 2.55e-05 0.18 ccggcaggcagagct
M4612_1.02 CTCFL chr6 - 154510847 154510861 2.55e-05 0.18 TCTCCAGGGTGCGCG
M4612_1.02 CTCFL chr6 - 154510595 154510609 2.7e-05 0.185 GCACGGGAGGGCGGC
M4612_1.02 CTCFL chr10 - 76337752 76337766 2.72e-05 0.185 CCTCTTGGTGGAGCC
M4612_1.02 CTCFL chr18 - 6729907 6729921 2.79e-05 0.185 GCGGCGCGGGGCGCG
M4612_1.02 CTCFL chr9 + 108756966 108756980 2.86e-05 0.185 CCTCTAGAGGGCAGG
M4612_1.02 CTCFL chr11 + 14030255 14030269 2.88e-05 0.185 cctgcccagggcgcc
M4612_1.02 CTCFL chr16 - 3028217 3028231 2.91e-05 0.185 GCGCCAGAAGGAGCT
M4612_1.02 CTCFL chr19 - 5624557 5624571 2.94e-05 0.185 CGGCCAGGCGGAGCA
M4612_1.02 CTCFL chr18 + 47260516 47260530 2.96e-05 0.185 CCCGCGGGAGTCGCT
M4612_1.02 CTCFL chr1 + 26111797 26111811 3e-05 0.185 CACCAcgggggcgcg
M4612_1.02 CTCFL chr1 - 227973014 227973028 3e-05 0.185 GCGGGAGGGGCCGGT
M4612_1.02 CTCFL chrX - 155881422 155881436 3.05e-05 0.185 CCCTCTGAGGGCGCG
M4612_1.02 CTCFL chrX + 155881426 155881440 3.08e-05 0.185 CCCTCAGAGGGTGCC
M4612_1.02 CTCFL chr1 - 227972831 227972845 3.12e-05 0.185 CCCCGGGAGGCCGCC
M4612_1.02 CTCFL chr11 - 116836149 116836163 3.16e-05 0.185 CTCCAAGAGGGCGCG
M4612_1.02 CTCFL chr4 - 675548 675562 3.18e-05 0.185 CCAGGAGAGGGGGCA
M4612_1.02 CTCFL chr1 + 26111824 26111838 3.25e-05 0.185 actggaggcggcggc
M4612_1.02 CTCFL chr16 - 3028375 3028389 3.29e-05 0.185 CCGCCAGAAGGTGGC
M4612_1.02 CTCFL chr8 - 86508870 86508884 3.29e-05 0.185 CCTGAAGAGAGCGCT
M4612_1.02 CTCFL chr3 - 150410101 150410115 3.29e-05 0.185 CCGACGGGGGTAGCT
M4612_1.02 CTCFL chr14 - 94537031 94537045 3.3e-05 0.185 CCAGCAGATGGTGCT
M4612_1.02 CTCFL chr9 + 74952664 74952678 3.34e-05 0.185 GCTGCGGGGGGCGAA
M4612_1.02 CTCFL chr10 + 26937438 26937452 3.35e-05 0.185 CCAACTGAGGGCACT
M4612_1.02 CTCFL chr15 - 81525481 81525495 3.49e-05 0.19 TCACAGGGCGGCGCC
M4612_1.02 CTCFL chr8 + 24931864 24931878 3.51e-05 0.19 ccacctgggtgcact
M4612_1.02 CTCFL chr12 - 22335714 22335728 3.62e-05 0.193 CCGCTAGGAGGTACC
M4612_1.02 CTCFL chr12 - 22335684 22335698 3.65e-05 0.193 CCGCCGGGGCGAGCA
M4612_1.02 CTCFL chr1 - 227972724 227972738 3.66e-05 0.193 CCACCGGGCGGCAGG
M4612_1.02 CTCFL chr12 - 15688684 15688698 3.73e-05 0.194 GCAGATGGGGGAGCC
M4612_1.02 CTCFL chr17 - 1111400 1111414 3.74e-05 0.194 CCTCCAGGGGGGCAC
M4612_1.02 CTCFL chr3 - 4791651 4791665 3.84e-05 0.195 CCCACAGGAGGAGTC
M4612_1.02 CTCFL chr2 - 6845504 6845518 3.84e-05 0.195 CATCCATGGGGCGGC
M4612_1.02 CTCFL chr11 - 68839230 68839244 3.9e-05 0.196 GCGGCGGGAGGCGGA
M4612_1.02 CTCFL chr7 + 18891264 18891278 4.09e-05 0.199 CCAGCAGAGGGAATC
M4612_1.02 CTCFL chr6 + 11537650 11537664 4.11e-05 0.199 GCTCCGGGGAGCGCA
M4612_1.02 CTCFL chr15 + 81525472 81525486 4.12e-05 0.199 cctccttgaggcgcc
M4612_1.02 CTCFL chr17 + 81927949 81927963 4.12e-05 0.199 CCTGCAGCCGGAGCC
M4612_1.02 CTCFL chr17 - 68020408 68020422 4.26e-05 0.199 CCTGCAGAGGGTCCC
M4612_1.02 CTCFL chr2 - 232550758 232550772 4.26e-05 0.199 GGCCCCGGGGGCGGC
M4612_1.02 CTCFL chr10 - 32056495 32056509 4.28e-05 0.199 GCGGCAGGGTGCGAG
M4612_1.02 CTCFL chr16 + 3028136 3028150 4.29e-05 0.199 CCACcggcgggcccg
M4612_1.02 CTCFL chr14 + 32427140 32427154 4.32e-05 0.199 CCCCCCTGGGGCACT
M4612_1.02 CTCFL chr1 + 22038207 22038221 4.34e-05 0.199 CCACGAGGAGTCGAC
M4612_1.02 CTCFL chr19 - 33177239 33177253 4.37e-05 0.199 CCGTTGGGGGGCCCG
M4612_1.02 CTCFL chr18 - 6729726 6729740 4.47e-05 0.199 CAGCTGGGCGGCGCG
M4612_1.02 CTCFL chr9 - 74952954 74952968 4.47e-05 0.199 GCGCTCGGGAGCGCG
M4612_1.02 CTCFL chrX + 135022003 135022017 4.52e-05 0.199 GCTCGAGGGGGAGGG
M4612_1.02 CTCFL chr16 + 79449177 79449191 4.63e-05 0.199 ctgacaggaggcggt
M4612_1.02 CTCFL chr10 - 129598789 129598803 4.69e-05 0.199 CCAGGAGGGGGTGTG
M4612_1.02 CTCFL chr17 + 68020078 68020092 4.7e-05 0.199 CCCAGCGGCGGCGGC
M4612_1.02 CTCFL chr8 + 142334492 142334506 4.7e-05 0.199 GCAGCAGGGGGGACG
M4612_1.02 CTCFL chr5 - 104368376 104368390 4.77e-05 0.199 CCCCCAGAGAGTGCC
M4612_1.02 CTCFL chr21 - 26845505 26845519 4.79e-05 0.199 GGAGCCGGGGGCGGC
M4612_1.02 CTCFL chr1 + 227972728 227972742 4.79e-05 0.199 CCGCCCGGTGGCCTG
M4612_1.02 CTCFL chr11 + 116836070 116836084 4.81e-05 0.199 CCACATGGGCGCGCG
M4612_1.02 CTCFL chr2 - 26555365 26555379 4.84e-05 0.199 CCTCCAGGAGTCACA
M4612_1.02 CTCFL chr6 + 11537716 11537730 4.86e-05 0.199 CCCGCCGGCGGCTGC
M4612_1.02 CTCFL chr17 - 1111552 1111566 4.92e-05 0.199 CCGTTTGGGGGGGCC
M4612_1.02 CTCFL chr6 - 129865236 129865250 4.93e-05 0.199 CCAACACGGGGAGGC
M4612_1.02 CTCFL chr1 + 144461622 144461636 4.93e-05 0.199 GCGCCAGCTGGCTCC
M4612_1.02 CTCFL chr1 - 146472597 146472611 4.93e-05 0.199 GCGCCAGCTGGCTCC
M4612_1.02 CTCFL chr1 - 21783034 21783048 5.04e-05 0.199 CTGGCAGGTGGCGAA
M4612_1.02 CTCFL chr3 + 4791655 4791669 5.07e-05 0.199 CCTCCTGTGGGCACT
M4612_1.02 CTCFL chr19 + 33177245 33177259 5.07e-05 0.199 CCCCAACGGGGCGTG
M4612_1.02 CTCFL chr12 + 47903936 47903950 5.15e-05 0.199 CCAGCAGGGAGCTGG
M4612_1.02 CTCFL chr1 + 27725590 27725604 5.24e-05 0.199 CTCCCAGAGGGCAGC
M4612_1.02 CTCFL chr1 + 54286000 54286014 5.32e-05 0.199 ACACCAAGGGGAGCT
M4612_1.02 CTCFL chr21 + 45555234 45555248 5.34e-05 0.199 gcagggggcggcgca
M4612_1.02 CTCFL chr18 - 9683538 9683552 5.38e-05 0.199 CCACATGGTGGCCCT
M4612_1.02 CTCFL chr17 + 71843120 71843134 5.42e-05 0.199 tccccaggtgccgct
M4612_1.02 CTCFL chr4 - 10661130 10661144 5.44e-05 0.199 CCTCCAGGGGCACCT
M4612_1.02 CTCFL chr9 - 27573497 27573511 5.44e-05 0.199 GGGCCCGGGGGCGGG
M4612_1.02 CTCFL chr1 - 21783113 21783127 5.46e-05 0.199 GCGCGGGCGGGCGCG
M4612_1.02 CTCFL chr10 - 96936106 96936120 5.46e-05 0.199 CCCCAGGAGGGCTCT
M4612_1.02 CTCFL chr6 + 27566150 27566164 5.47e-05 0.199 ccgccatggggccag
M4612_1.02 CTCFL chr17 - 50071990 50072004 5.47e-05 0.199 CCACCAGGAGGTCCT
M4612_1.02 CTCFL chr1 + 144461494 144461508 5.57e-05 0.201 GCGCCACAGGTCGCC
M4612_1.02 CTCFL chr2 - 100909936 100909950 5.61e-05 0.202 TCAGCAGAGGGAGGC
M4612_1.02 CTCFL chr6 + 145235369 145235383 5.68e-05 0.203 ccccctgaaggagcc
M4612_1.02 CTCFL chr5 - 80623179 80623193 5.82e-05 0.206 CCCCCAGAGGTAACC
M4612_1.02 CTCFL chr6 + 158151060 158151074 5.84e-05 0.206 ccatcaggaggcatc
M4612_1.02 CTCFL chr21 - 26845354 26845368 5.97e-05 0.209 AAGCCAGGGTGCGCT
M4612_1.02 CTCFL chr19 + 57191457 57191471 6.03e-05 0.21 GCCGGTGGGGGCGGG
M4612_1.02 CTCFL chr9 + 74952860 74952874 6.16e-05 0.213 CCGCGAAGCGGCGGA
M4612_1.02 CTCFL chr20 - 18429005 18429019 6.19e-05 0.213 CCCCCAGGGAGTGTC
M4612_1.02 CTCFL chr1 - 116627495 116627509 6.25e-05 0.213 GCTCCAGGAGGAGGT
M4612_1.02 CTCFL chr6 + 154510721 154510735 6.28e-05 0.213 GTGGGAGGGGGCGGG
M4612_1.02 CTCFL chr2 + 232550445 232550459 6.41e-05 0.216 GCGGGAGGGGGCCAG
M4612_1.02 CTCFL chrX + 135022023 135022037 6.43e-05 0.216 CGGAGGGAGGGCGCC
M4612_1.02 CTCFL chr2 - 55620357 55620371 6.6e-05 0.22 CTGACAGGGGGCAGA
M4612_1.02 CTCFL chr17 + 50649088 50649102 6.76e-05 0.221 gcgacagagggagac
M4612_1.02 CTCFL chr5 + 82374541 82374555 6.81e-05 0.221 CCAGGTGGGGGTGCA
M4612_1.02 CTCFL chr1 - 116627492 116627506 6.81e-05 0.221 CCAGGAGGAGGTGCA
M4612_1.02 CTCFL chr9 + 74952977 74952991 6.84e-05 0.221 CCGGAAGTGCGCGCT
M4612_1.02 CTCFL chr17 - 1111399 1111413 6.86e-05 0.221 CTCCAGGGGGGCACC
M4612_1.02 CTCFL chr6 + 44248164 44248178 6.96e-05 0.221 ACCTCAGGGGGAGCA
M4612_1.02 CTCFL chr3 - 156172187 156172201 6.98e-05 0.221 CCACCAGAGGGACTT
M4612_1.02 CTCFL chr15 - 81525468 81525482 7e-05 0.221 CCTCAAGGAGGCAGG
M4612_1.02 CTCFL chr7 + 155919402 155919416 7.03e-05 0.221 CCTGCAGAGGCCAGC
M4612_1.02 CTCFL chr6 - 11537712 11537726 7.15e-05 0.221 CCGCCGGCGGGCCAC
M4612_1.02 CTCFL chr16 - 31459830 31459844 7.15e-05 0.221 CGACGCGGGGGCGGG
M4612_1.02 CTCFL chr21 - 45555072 45555086 7.15e-05 0.221 CCCCCTGGTGGCCAC
M4612_1.02 CTCFL chr10 - 69769614 69769628 7.15e-05 0.221 TCTGGAGGGGGCCCA
M4612_1.02 CTCFL chr3 + 9933412 9933426 7.18e-05 0.221 CTTCCTGGGGGCCCT
M4612_1.02 CTCFL chr6 + 147508624 147508638 7.21e-05 0.221 CCCCgcggcggcagc
M4612_1.02 CTCFL chr6 - 11537507 11537521 7.31e-05 0.221 CCGCAGTGGGGCGGA
M4612_1.02 CTCFL chr1 + 114716849 114716863 7.44e-05 0.221 GCGGCAGGCCGCACC
M4612_1.02 CTCFL chr2 + 190277857 190277871 7.54e-05 0.221 ctgcaaggtggagct
M4612_1.02 CTCFL chr10 - 69769729 69769743 7.57e-05 0.221 CTTGCAGGGGGCTAC
M4612_1.02 CTCFL chr21 + 26845552 26845566 7.73e-05 0.221 TCGGGAGGGGGAGGG
M4612_1.02 CTCFL chr19 + 44051292 44051306 7.73e-05 0.221 acaggaggtggagct
M4612_1.02 CTCFL chr5 - 72287052 72287066 7.73e-05 0.221 ACAGGAGGTGGAGCT
M4612_1.02 CTCFL chr5 + 77981575 77981589 7.73e-05 0.221 acaggaggtggagct
M4612_1.02 CTCFL chr4 + 78036611 78036625 7.73e-05 0.221 acaggaggtggagct
M4612_1.02 CTCFL chr18 - 6729952 6729966 7.87e-05 0.221 CCTGGTGGGAGCGGC
M4612_1.02 CTCFL chr6 - 25177797 25177811 7.9e-05 0.221 ACACAAGAGGGCAGC
M4612_1.02 CTCFL chr18 + 6729656 6729670 7.93e-05 0.221 CCGGGGCGGGGCGGG
M4612_1.02 CTCFL chr3 + 9933140 9933154 7.93e-05 0.221 CTGCAGGAGGGCGGC
M4612_1.02 CTCFL chr17 + 81927553 81927567 7.93e-05 0.221 ccggggcggggcggg
M4612_1.02 CTCFL chr5 - 117039286 117039300 7.95e-05 0.221 CCACCATGTGGCTGC
M4612_1.02 CTCFL chr15 - 89383934 89383948 8.01e-05 0.221 CAGCCAGGGGTCCTC
M4612_1.02 CTCFL chr17 - 63124763 63124777 8.15e-05 0.221 CTGACAGGAGGCGGA
M4612_1.02 CTCFL chr9 - 71210128 71210142 8.15e-05 0.221 CTGACAGGAGGCGGA
M4612_1.02 CTCFL chr9 - 90433828 90433842 8.15e-05 0.221 CTGACAGGAGGCGGA
M4612_1.02 CTCFL chr6 - 147508617 147508631 8.29e-05 0.221 CCGCGGGGAGGGGCG
M4612_1.02 CTCFL chr9 - 86176528 86176542 8.32e-05 0.221 GCGGTGGGGGGCAGG
M4612_1.02 CTCFL chr1 + 21783145 21783159 8.35e-05 0.221 CCGCAAAGCGCCGCC
M4612_1.02 CTCFL chr17 - 68020071 68020085 8.35e-05 0.221 CCGCTGGGGGCGGCT
M4612_1.02 CTCFL chr18 + 6729695 6729709 8.47e-05 0.221 GCGGGAGAGAGCGGC
M4612_1.02 CTCFL chr10 + 22003633 22003647 8.47e-05 0.221 gcgggcgggGCCGCA
M4612_1.02 CTCFL chr6 + 147508621 147508635 8.47e-05 0.221 CCTCCCCgcggcggc
M4612_1.02 CTCFL chr9 + 132763709 132763723 8.5e-05 0.221 ccacttggcagcgct
M4612_1.02 CTCFL chr1 + 116627591 116627605 8.53e-05 0.221 CAGGCCGGGAGCGCA
M4612_1.02 CTCFL chr1 + 26111598 26111612 8.56e-05 0.221 CCTGCGGGGAGCAGC
M4612_1.02 CTCFL chr19 + 46029063 46029077 8.56e-05 0.221 ACCAGAGGGCGCGCC
M4612_1.02 CTCFL chr2 - 232550793 232550807 8.56e-05 0.221 GCGGGGGCGGGCGCG
M4612_1.02 CTCFL chr6 - 147508576 147508590 8.62e-05 0.221 ACGGGAGGGGCCGGG
M4612_1.02 CTCFL chr15 + 34799572 34799586 8.67e-05 0.221 CTGGAAGGGAGCGGC
M4612_1.02 CTCFL chrX - 155881463 155881477 8.67e-05 0.221 CCTCCCGCAGGCGCA
M4612_1.02 CTCFL chr11 - 10314687 10314701 8.73e-05 0.221 GCTCTCGGGGGCTGC
M4612_1.02 CTCFL chr17 - 81927771 81927785 8.73e-05 0.221 CCGGCCGGCCGCGTC
M4612_1.02 CTCFL chr4 + 38470849 38470863 8.77e-05 0.221 ccacaaggtagcact
M4612_1.02 CTCFL chr1 + 175888278 175888292 8.77e-05 0.221 CCCCAGGGAGGCTCT
M4612_1.02 CTCFL chr2 - 232550560 232550574 8.86e-05 0.221 CCAGCTCAGGGCGGC
M4612_1.02 CTCFL chr17 - 63124760 63124774 8.95e-05 0.221 ACAGGAGGCGGAGCT
M4612_1.02 CTCFL chr9 - 71210125 71210139 8.95e-05 0.221 ACAGGAGGCGGAGCT
M4612_1.02 CTCFL chr9 - 90433825 90433839 8.95e-05 0.221 ACAGGAGGCGGAGCT
M4612_1.02 CTCFL chr12 - 112014265 112014279 8.95e-05 0.221 ACAGGAGGCGGAGCT
M4612_1.02 CTCFL chr10 - 116682321 116682335 8.95e-05 0.221 CCTCCCTGGGGCAGC
M4612_1.02 CTCFL chr16 - 75526297 75526311 8.98e-05 0.221 CCAGCAGGGAGCAAA
M4612_1.02 CTCFL chr4 - 75834309 75834323 9.05e-05 0.222 GCCCAAGGGAGCTCC
M4612_1.02 CTCFL chr3 - 150410177 150410191 9.14e-05 0.222 ACGGGTGGCGGCGGC
M4612_1.02 CTCFL chr9 + 74953046 74953060 9.21e-05 0.222 CCGCAGAGGGGCGTG
M4612_1.02 CTCFL chr8 + 94092911 94092925 9.21e-05 0.222 accaaagggggcaca
M4612_1.02 CTCFL chr6 - 147508615 147508629 9.21e-05 0.222 GCGGGGAGGGGCGCG
M4612_1.02 CTCFL chrX + 135021917 135021931 9.24e-05 0.222 GCGGCAGCAGGAGCC
M4612_1.02 CTCFL chr16 + 30941575 30941589 9.36e-05 0.223 CCAGCTGCGGGCAGC
M4612_1.02 CTCFL chr10 - 129598436 129598450 9.4e-05 0.223 CCCCCAGGATGTGCC
M4612_1.02 CTCFL chr6 - 154510495 154510509 9.4e-05 0.223 CCGGCCGAGGGAGAG
M4612_1.02 CTCFL chr1 + 163321932 163321946 9.49e-05 0.224 GCGGAATGGGGCGGG
M4612_1.02 CTCFL chr19 - 5624310 5624324 9.53e-05 0.224 GCGCCAGGCAGCACG
M4612_1.02 CTCFL chr21 - 45555015 45555029 9.59e-05 0.224 GCACAGGGCGGCCCC
M4612_1.02 CTCFL chr1 + 146472516 146472530 9.79e-05 0.228 GCGGCAGAGGCGGCC
M4612_1.02 CTCFL chr1 - 26111565 26111579 9.86e-05 0.228 CCGCGAGGCCACGCC
M4612_1.02 CTCFL chr5 + 10288825 10288839 9.9e-05 0.228 GCACCTGGGGGAGTG
M4612_1.02 CTCFL chr1 + 204495467 204495481 9.9e-05 0.228 CCAGCAGTGGTCTCT
M4612_1.02 CTCFL chr15 + 81525475 81525489 9.96e-05 0.228 ccttgaggcgccgcc

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_43 --bgfile /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M4612_1.02 /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_43 MEME file name = /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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