Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATTGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 TATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAAA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACT
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCTGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGATGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATACCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.287 C 0.213 G 0.213 T 0.287


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M4477_1.02 SRF chr5 + 33313263 33313281 1.37e-11 1.98e-06 ccatgcccaaataaggcaa
M4477_1.02 SRF chr17 - 50649349 50649367 1.37e-11 1.98e-06 CCATGCCCAAATAAGGCAA
M4477_1.02 SRF chr16 - 50724550 50724568 1.37e-11 1.98e-06 CCATGCCCATATAAGGCAA
M4477_1.02 SRF chr2 + 190277763 190277781 1.37e-11 1.98e-06 ccatgcccaaataaggcaa
M4477_1.02 SRF chr15 + 83471499 83471517 4.23e-11 4.89e-06 ctatgcccaaataaggcaa
M4477_1.02 SRF chr12 + 99686331 99686349 6.76e-11 6.51e-06 acatgcccaaataaggcaa
M4477_1.02 SRF chr13 - 19811576 19811594 2.51e-10 1.45e-05 CCATGTCCATATAAGGCAA
M4477_1.02 SRF chr1 - 92105868 92105886 2.51e-10 1.45e-05 CCATGTCCAAATAAGGCAA
M4477_1.02 SRF chr11 - 118320750 118320768 2.51e-10 1.45e-05 CCATGTCCATATAAGGCAA
M4477_1.02 SRF chr13 + 30889364 30889382 2.51e-10 1.45e-05 ccatgtccaaataaggcaa
M4477_1.02 SRF chr1 - 96878976 96878994 9.11e-10 4.58e-05 CCACGCCCAAATAAGGCAA
M4477_1.02 SRF chr11 + 86053304 86053322 9.51e-10 4.58e-05 acatgtccaaataaggcaa
M4477_1.02 SRF chr14 + 34332373 34332391 1.43e-09 6.34e-05 ccgaggccaaataaggcaa
M4477_1.02 SRF chr20 + 1083566 1083584 1.63e-09 6.73e-05 tcgtgcccaaataaggcaa
M4477_1.02 SRF chr14 + 49858530 49858548 3.73e-09 0.000133 tcatgtccaaataaggcaa
M4477_1.02 SRF chr5 + 41874711 41874729 3.86e-09 0.000133 ttgtgcccaaataaggcaa
M4477_1.02 SRF chr16 - 75526585 75526603 3.92e-09 0.000133 CCAAGTCCATATAAGGCAA
M4477_1.02 SRF chr4 + 57162662 57162680 4.52e-09 0.000137 ccatgtccaaataaggcag
M4477_1.02 SRF chr14 + 70343215 70343233 4.52e-09 0.000137 ccatgtccaaataaggcag
M4477_1.02 SRF chr6 - 124607428 124607446 5.78e-09 0.000162 TCATGCCCAAATAAGGCAG
M4477_1.02 SRF chr1 - 67090007 67090025 5.94e-09 0.000162 CCAAGCCCAAATAAGGCAG
M4477_1.02 SRF chr20 + 53952737 53952755 6.18e-09 0.000162 tcgtgaccaaataaggcaa
M4477_1.02 SRF chr20 + 53952705 53952723 1.12e-08 0.00028 ccattcccaaataaggcag
M4477_1.02 SRF chr10 - 52116072 52116090 1.17e-08 0.000281 ACATGTCCAAATAAGGAAA
M4477_1.02 SRF chr7 - 99920409 99920427 1.56e-08 0.00036 CCATGCCCCAATAAGGCAA
M4477_1.02 SRF chr8 - 25020096 25020114 2.12e-08 0.000453 CCATATCCAAATAAGGCAA
M4477_1.02 SRF chr6 - 147999336 147999354 2.12e-08 0.000453 CCATATCCAAATAAGGCAA
M4477_1.02 SRF chr18 + 46067681 46067699 2.91e-08 0.000599 tcaagtccaaataaggcaa
M4477_1.02 SRF chr10 + 44813267 44813285 3.46e-08 0.000689 ccacgccctaataaggcaa
M4477_1.02 SRF chr6 + 112317437 112317455 4.05e-08 0.00078 caatgtccaaataaggcag
M4477_1.02 SRF chr5 - 117252875 117252893 4.72e-08 0.00088 ACATATCCAAATAAGGCAA
M4477_1.02 SRF chr10 + 120054350 120054368 4.97e-08 0.000896 ttatacccaaataaggcaa
M4477_1.02 SRF chr6 + 104799331 104799349 5.76e-08 0.00101 ccatgaccaaattaggcaa
M4477_1.02 SRF chr6 - 117440866 117440884 8.82e-08 0.0015 CCATGCCCAAATGAGGCAA
M4477_1.02 SRF chr5 + 80622814 80622832 1.03e-07 0.0017 gggagaccaaataaggcaa
M4477_1.02 SRF chr2 - 191434249 191434267 1.12e-07 0.00173 CCATGCCCAGATAAGGCAG
M4477_1.02 SRF chr6 + 96947193 96947211 1.14e-07 0.00173 tcatatccaaataaggcaa
M4477_1.02 SRF chr5 + 137998025 137998043 1.14e-07 0.00173 tcatatccaaataaggcaa
M4477_1.02 SRF chr12 - 132617484 132617502 1.31e-07 0.00195 ATCATGCCATATAAGGCAA
M4477_1.02 SRF chr10 - 25584995 25585013 1.39e-07 0.00201 CAATATCCAAATAAGGCAA
M4477_1.02 SRF chr12 + 14655016 14655034 1.48e-07 0.00208 ccatgcccaaataaagcaa
M4477_1.02 SRF chr10 - 12596368 12596386 2.16e-07 0.00297 TCACACCCAAATAAGGCAA
M4477_1.02 SRF chr5 + 41874679 41874697 2.3e-07 0.00308 ccatgtccacataaggcaa
M4477_1.02 SRF chr9 + 26954329 26954347 2.35e-07 0.00308 aacagtccaaataaggcaa
M4477_1.02 SRF chr13 + 97712815 97712833 2.68e-07 0.00344 tcatgcccacataaggcaa
M4477_1.02 SRF chr10 + 34032630 34032648 2.91e-07 0.00365 tcatgcccaaacaaggtaa
M4477_1.02 SRF chr21 - 41572286 41572304 2.99e-07 0.00367 CCATGCCCACATAAGGCAG
M4477_1.02 SRF chr20 - 48354667 48354685 3.15e-07 0.00379 CCATGCCTAAATAAGGCAG
M4477_1.02 SRF chr1 + 199575123 199575141 3.84e-07 0.00453 acgtgtccatattaggcaa
M4477_1.02 SRF chr17 - 50649381 50649399 4.21e-07 0.00486 ACATGTCCACATAAGGCAA
M4477_1.02 SRF chr10 - 10860816 10860834 4.36e-07 0.00488 CCATGAACATATAAGGCAA
M4477_1.02 SRF chr5 - 123298098 123298116 4.39e-07 0.00488 AATAGTCCAAATAAGGCCA
M4477_1.02 SRF chr3 + 125332634 125332652 4.73e-07 0.00512 ccatgtccgtataaggcaa
M4477_1.02 SRF chr6 + 41242569 41242587 4.9e-07 0.00512 gataggccaaataagggaa
M4477_1.02 SRF chr5 + 37800059 37800077 4.96e-07 0.00512 ccatgtccatataaagcaa
M4477_1.02 SRF chr18 + 50747880 50747898 4.96e-07 0.00512 tcatacccaaacaaggcaa
M4477_1.02 SRF chr6 - 32799475 32799493 6.92e-07 0.00701 CCATGATCAAATAAGGCAA
M4477_1.02 SRF chr5 - 96673471 96673489 8.29e-07 0.00825 CCATACCTAAATAAGGCAA
M4477_1.02 SRF chr13 + 33572349 33572367 9.94e-07 0.00883 ccatgttcaaataaggcaa
M4477_1.02 SRF chr5 + 43203418 43203436 9.94e-07 0.00883 ccatgttcaaataaggcaa
M4477_1.02 SRF chr13 + 45867468 45867486 9.94e-07 0.00883 ccatgttcaaataaggcaa
M4477_1.02 SRF chr10 + 90204932 90204950 9.94e-07 0.00883 ccatgttcaaataaggcaa
M4477_1.02 SRF chr4 + 184234288 184234306 9.94e-07 0.00883 ccatgttcaaataaggcaa
M4477_1.02 SRF chr13 - 38419656 38419674 9.94e-07 0.00883 CCATGTTCAAATAAGGCAA
M4477_1.02 SRF chr5 - 131305462 131305480 9.94e-07 0.00883 CCATGTTCAAATAAGGCAA
M4477_1.02 SRF chr10 - 21724964 21724982 1.03e-06 0.00903 CTGACCCCATATAAGGCAC
M4477_1.02 SRF chr2 + 18934933 18934951 1.1e-06 0.00946 tcatgtccaaatgaggcaa
M4477_1.02 SRF chr1 - 56400852 56400870 1.15e-06 0.00972 GGTAGTCCAAATATGGCAA
M4477_1.02 SRF chr2 + 211955703 211955721 1.24e-06 0.0102 ctatgtccaaataagacaa
M4477_1.02 SRF chr18 - 8308290 8308308 1.24e-06 0.0102 CCATGCTCAAATAAGGCAG
M4477_1.02 SRF chr5 + 158267253 158267271 1.27e-06 0.0103 ccatgtcaaaataaggcaa
M4477_1.02 SRF chr7 - 141514026 141514044 1.55e-06 0.0124 CCATGTCCAAATAATGCAA
M4477_1.02 SRF chr9 - 98806831 98806849 1.64e-06 0.013 CAACAACCAAAAAAGGCCA
M4477_1.02 SRF chr3 - 122522504 122522522 1.8e-06 0.014 TCATGCCCAGAAAAGGTAA
M4477_1.02 SRF chr5 + 104368058 104368076 1.99e-06 0.0153 gcatgttcaaataaggcaa
M4477_1.02 SRF chr2 + 119352535 119352553 2.07e-06 0.0158 acatgtcaaaataaggcaa
M4477_1.02 SRF chr2 - 42088006 42088024 2.26e-06 0.0168 CCACGTCCAAATAAAGCAA
M4477_1.02 SRF chr3 + 141180029 141180047 2.27e-06 0.0168 ctatacccaaataaagcaa
M4477_1.02 SRF chr20 + 44320093 44320111 2.36e-06 0.0169 ccatacccaaataagacaa
M4477_1.02 SRF chr6 + 123363985 123364003 2.38e-06 0.0169 ctgtgtccaaaagaggcaa
M4477_1.02 SRF chr1 + 80579102 80579120 2.45e-06 0.0169 acatgtccaaatatagcaa
M4477_1.02 SRF chr8 - 583433 583451 2.64e-06 0.0169 CTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr3 - 14080573 14080591 2.64e-06 0.0169 CTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr10 + 28398894 28398912 2.64e-06 0.0169 ctgtgttcaaataaggcaa
M4477_1.02 SRF chr12 - 65984329 65984347 2.64e-06 0.0169 CTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr12 - 92650775 92650793 2.64e-06 0.0169 CTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr9 - 108757277 108757295 2.64e-06 0.0169 CTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr7 - 120734172 120734190 2.64e-06 0.0169 CTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr8 + 142334142 142334160 2.64e-06 0.0169 ctgtgttcaaataaggcaa
M4477_1.02 SRF chr1 - 223057098 223057116 2.64e-06 0.0169 CTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr11 + 115037074 115037092 2.66e-06 0.0169 ctgtgctcaaataaggcga
M4477_1.02 SRF chr6 - 105176338 105176356 2.88e-06 0.0181 TTATGCCCAAATAAAGCAG
M4477_1.02 SRF chr9 + 113125716 113125734 2.99e-06 0.0183 ggtaatccaaataaggcaa
M4477_1.02 SRF chr4 - 141859764 141859782 2.99e-06 0.0183 GGTAATCCAAATAAGGCAA
M4477_1.02 SRF chr6 + 25177717 25177735 3e-06 0.0183 gatagaccaaacaaggcaa
M4477_1.02 SRF chrX + 102902598 102902616 3.76e-06 0.0226 tatagaccaaaaaagggaa
M4477_1.02 SRF chr8 + 95177995 95178013 3.9e-06 0.0232 ccatgtccatataacgcga
M4477_1.02 SRF chr18 + 29008015 29008033 4.13e-06 0.0243 atgtgttcaaataaggcaa
M4477_1.02 SRF chr1 - 199575126 199575144 4.24e-06 0.0247 CAGTTGCCTAATATGGACA
M4477_1.02 SRF chr6 + 93008436 93008454 4.51e-06 0.0261 ccatgttcaaataaggtaa
M4477_1.02 SRF chr6 + 109189053 109189071 4.9e-06 0.028 gtgtgttcaaataaggcaa
M4477_1.02 SRF chr3 - 168736404 168736422 5.48e-06 0.031 CCATAGCCAAATCAGGTAA
M4477_1.02 SRF chr2 + 172249506 172249524 6.19e-06 0.0347 ccatgtccaaacaagacaa
M4477_1.02 SRF chr3 - 177614210 177614228 6.44e-06 0.0357 GATAGTCCAAATAGGGCAA
M4477_1.02 SRF chr16 + 50724547 50724565 6.57e-06 0.0358 catttgccttatatgggca
M4477_1.02 SRF chr8 + 24931754 24931772 6.63e-06 0.0358 ccatattcaaataaggcaa
M4477_1.02 SRF chr18 - 61772662 61772680 6.63e-06 0.0358 CCATATTCAAATAAGGCAA
M4477_1.02 SRF chr4 + 38470742 38470760 6.94e-06 0.0361 ttgtgttcaaataaggcaa
M4477_1.02 SRF chr14 - 80051082 80051100 6.94e-06 0.0361 TTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr6 - 148597403 148597421 6.94e-06 0.0361 TTGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr7 + 159317372 159317390 6.94e-06 0.0361 ttgtgttcaaataaggcaa
M4477_1.02 SRF chr11 + 118320747 118320765 7.22e-06 0.0371 catttgccttatatggaca
M4477_1.02 SRF chr6 - 112465472 112465490 7.29e-06 0.0371 GCACGTTCAAATAAGGCAA
M4477_1.02 SRF chr1 - 27725513 27725531 7.32e-06 0.0371 CCAAGCCCAAAGAAGGTGG
M4477_1.02 SRF chr5 - 117039386 117039404 7.47e-06 0.0374 CTGTGTTCAAATAAGGCAG
M4477_1.02 SRF chr13 - 38093756 38093774 7.51e-06 0.0374 CTGTGTTCAAATAAGGAAA
M4477_1.02 SRF chr10 - 69769697 69769715 7.84e-06 0.0387 ACAAAGCCATAAATGGGCT
M4477_1.02 SRF chr12 + 76426209 76426227 8.2e-06 0.0401 tcatgttcaaataaggcag
M4477_1.02 SRF chr10 - 121678960 121678978 8.56e-06 0.0414 GCATATGCAAATAAGGCAA
M4477_1.02 SRF chr2 + 165958381 165958399 8.6e-06 0.0414 acatgttctaataaggcaa
M4477_1.02 SRF chr7 - 130240573 130240591 8.99e-06 0.0429 CTTTAACCCTATAAGGAAA
M4477_1.02 SRF chr19 - 40945956 40945974 9.21e-06 0.0431 ACATGCTCAGATAAGGCAA
M4477_1.02 SRF chr19 - 41013921 41013939 9.21e-06 0.0431 ACATGCTCAGATAAGGCAA
M4477_1.02 SRF chr5 + 101393804 101393822 9.25e-06 0.0431 ctgttttcaaataaggcaa
M4477_1.02 SRF chr12 + 96056852 96056870 9.52e-06 0.044 accacgcccaataaggcag
M4477_1.02 SRF chr10 - 2965243 2965261 9.89e-06 0.045 GAGTGTTCAAATAAGGCAA
M4477_1.02 SRF chr6 + 118542990 118543008 9.89e-06 0.045 ttttaaccttataaggaaa
M4477_1.02 SRF chr1 - 59507195 59507213 1.01e-05 0.0455 CTCTGTTCAAATAAGGCCG
M4477_1.02 SRF chr17 + 70317738 70317756 1.04e-05 0.0465 GCAATGCCAAAATAGGCAT
M4477_1.02 SRF chr13 + 19811573 19811591 1.05e-05 0.0465 ggtttgccttatatggaca
M4477_1.02 SRF chr9 + 132763594 132763612 1.07e-05 0.0472 ccgtattcaaataaggcaa
M4477_1.02 SRF chr10 - 10860784 10860802 1.09e-05 0.0472 CTGTATGCAAATAAGGCAA
M4477_1.02 SRF chr20 + 44320376 44320394 1.09e-05 0.0472 cacaggccaaagatgggca
M4477_1.02 SRF chr7 - 99920377 99920395 1.13e-05 0.0486 TCATTGTCAAATAAGGCAG
M4477_1.02 SRF chr10 + 44801666 44801684 1.14e-05 0.0486 catagtccaaatgaggcca
M4477_1.02 SRF chr10 - 44813270 44813288 1.16e-05 0.0488 CCATTGCCTTATTAGGGCG
M4477_1.02 SRF chr9 - 87111342 87111360 1.16e-05 0.0488 CCACGCTCAAATATGGCAG
M4477_1.02 SRF chr4 - 31221246 31221264 1.19e-05 0.0494 GCATACCCAAATAAGACAG
M4477_1.02 SRF chr13 - 43090277 43090295 1.19e-05 0.0494 CCATGCTCAAACAAGGTAA
M4477_1.02 SRF chr1 + 60173065 60173083 1.22e-05 0.0505 ccatgcccaaacaatgcag
M4477_1.02 SRF chr9 + 132763562 132763580 1.29e-05 0.0528 ttttggccaactaaggcag
M4477_1.02 SRF chr16 - 50724582 50724600 1.45e-05 0.0589 CTATATCCATATAAAGAAA
M4477_1.02 SRF chr5 + 79959508 79959526 1.47e-05 0.0595 ctgtattcaaataaggcaa
M4477_1.02 SRF chr12 + 132617481 132617499 1.55e-05 0.0622 tgtttgccttatatggcat
M4477_1.02 SRF chrX - 40856259 40856277 1.62e-05 0.0647 ATGATTCCCTATAAGGAAA
M4477_1.02 SRF chr8 + 142334113 142334131 1.82e-05 0.072 ttttggccaaacaaagcca
M4477_1.02 SRF chr17 - 14417678 14417696 1.95e-05 0.0765 CCATGTCGAAATAAGGTAT
M4477_1.02 SRF chr4 + 1265009 1265027 2.08e-05 0.0813 gtcaatccatacaaggaaa
M4477_1.02 SRF chr1 + 56400849 56400867 2.11e-05 0.0816 caattgccatatttggact
M4477_1.02 SRF chr17 - 35285287 35285305 2.12e-05 0.0816 CCATGTCCACAGAAGGTAA
M4477_1.02 SRF chr1 + 236945164 236945182 2.14e-05 0.0818 CCCTGCCCATGCAAGGGCC
M4477_1.02 SRF chr3 - 60107572 60107590 2.19e-05 0.0831 GATAGAGCAAATAAGGCAA
M4477_1.02 SRF chr16 + 75526582 75526600 2.21e-05 0.0833 catttgccttatatggact
M4477_1.02 SRF chr8 + 124339332 124339350 2.36e-05 0.0885 acatgtccaaacaagacag
M4477_1.02 SRF chr6 - 28956555 28956573 2.46e-05 0.0915 CTTTAACCTTACAAGGACA
M4477_1.02 SRF chr15 + 66950171 66950189 2.48e-05 0.0917 ccatgtttatataaggcaa
M4477_1.02 SRF chr7 + 96436095 96436113 2.5e-05 0.092 GAAATACCAAGTAAGGGAA
M4477_1.02 SRF chr6 - 98288207 98288225 2.53e-05 0.0926 GATAGACCAAATAAGACAA
M4477_1.02 SRF chr6 + 118660430 118660448 2.64e-05 0.0955 AGATTGCCAGATAAGGGGC
M4477_1.02 SRF chr14 + 70343503 70343521 2.65e-05 0.0955 ATTTTTCAAAATAAGGCAA
M4477_1.02 SRF chr6 + 27565892 27565910 2.83e-05 0.101 tgcattccatacatggcca
M4477_1.02 SRF chr5 + 123298095 123298113 2.85e-05 0.102 caatggccttatttggact
M4477_1.02 SRF chr12 - 108955166 108955184 3.07e-05 0.109 TTCTTCTCATATAAGGAAA
M4477_1.02 SRF chr6 - 27565895 27565913 3.08e-05 0.109 TAGTGGCCATGTATGGAAT
M4477_1.02 SRF chr16 - 19566712 19566730 3.29e-05 0.115 TTGGGTTCAAATAAGGCAA
M4477_1.02 SRF chr14 - 34332376 34332394 3.39e-05 0.118 CTCTTGCCTTATTTGGCCT
M4477_1.02 SRF chr6 + 139201382 139201400 3.42e-05 0.118 aaattccccaaataggcca
M4477_1.02 SRF chr1 - 230620990 230621008 3.42e-05 0.118 CCTTAACCCTACAAGGAAA
M4477_1.02 SRF chr2 - 150292527 150292545 3.48e-05 0.119 ATGAAGCCAAGAAAGGGCA
M4477_1.02 SRF chr10 + 12596076 12596094 3.53e-05 0.119 TTCAGTCCTAAAAAGGGAC
M4477_1.02 SRF chr12 - 99686334 99686352 3.53e-05 0.119 CTTTTGCCTTATTTGGGCA
M4477_1.02 SRF chr6 + 112308450 112308468 3.59e-05 0.12 gctagttcaaataaggcag
M4477_1.02 SRF chr6 + 129865156 129865174 3.63e-05 0.121 gcgtgtctatatcaggcaa
M4477_1.02 SRF chr5 - 106435227 106435245 3.68e-05 0.122 GGCATCCCATAAATGGCTG
M4477_1.02 SRF chr20 - 53952795 53952813 3.71e-05 0.122 TATAGGCCAAACATGGAAG
M4477_1.02 SRF chr3 + 14080504 14080522 3.84e-05 0.126 ttatagacaaaaaaggaca
M4477_1.02 SRF chr10 + 21724961 21724979 3.96e-05 0.128 ACAGTGCCTTATATGGGGT
M4477_1.02 SRF chr5 + 62233558 62233576 3.96e-05 0.128 GGAAGCCCATAAATAGCAG
M4477_1.02 SRF chr7 + 142954999 142955017 4.08e-05 0.131 ccatgcccattaaagacaa
M4477_1.02 SRF chr10 + 5321345 5321363 4.09e-05 0.131 ccttgttcaaagaaggcaa
M4477_1.02 SRF chr6 + 147508791 147508809 4.11e-05 0.131 CCTTTCCTTTAAAAGGAAA
M4477_1.02 SRF chr8 + 19734408 19734426 4.16e-05 0.132 ttgcacccaaataagacaa
M4477_1.02 SRF chr14 + 92224656 92224674 4.25e-05 0.134 ctgccttcatataaggcaa
M4477_1.02 SRF chr5 + 43598983 43599001 4.36e-05 0.135 ctgcattcaaataaggcaa
M4477_1.02 SRF chr4 - 54599017 54599035 4.36e-05 0.135 CTGCATTCAAATAAGGCAA
M4477_1.02 SRF chr9 - 81906966 81906984 4.36e-05 0.135 CTGCATTCAAATAAGGCAA
M4477_1.02 SRF chr12 - 70354162 70354180 4.59e-05 0.14 CTGCTGGCAAAAAAGGAAA
M4477_1.02 SRF chr9 + 81906886 81906904 4.63e-05 0.14 ttatagacaaaaaaggtaa
M4477_1.02 SRF chr5 - 43599063 43599081 4.63e-05 0.14 TTATAGACAAAAAAGGTAA
M4477_1.02 SRF chr14 - 92224736 92224754 4.63e-05 0.14 TTATAGACAAAAAAGGTAA
M4477_1.02 SRF chr3 - 48034334 48034352 4.65e-05 0.14 TCCTTGCCATAAAAGTAAA
M4477_1.02 SRF chr13 + 38419321 38419339 4.72e-05 0.142 ccatgtgcaaatgtggcaa
M4477_1.02 SRF chr5 - 37800062 37800080 4.86e-05 0.146 CAATTGCTTTATATGGACA
M4477_1.02 SRF chr10 + 12596103 12596121 4.91e-05 0.146 GGAAGACCCAAGAAGGGAA
M4477_1.02 SRF chr17 - 13181837 13181855 5.24e-05 0.155 TCTAACCCTTACAAGGAAA
M4477_1.02 SRF chr6 - 157377073 157377091 5.26e-05 0.155 CCATGTTCAAATAAGACAA
M4477_1.02 SRF chr15 - 73172503 73172521 5.37e-05 0.158 GGGTTACTAAATAAGGAAT
M4477_1.02 SRF chr7 - 32540499 32540517 5.6e-05 0.163 GCATGACCAAAATAAGGCA
M4477_1.02 SRF chr3 - 125332637 125332655 5.6e-05 0.163 CATTTGCCTTATACGGACA
M4477_1.02 SRF chr9 - 87111315 87111333 5.81e-05 0.168 TTGTAGCCAAATCAGGTGA
M4477_1.02 SRF chr11 - 86053307 86053325 5.86e-05 0.168 CGTTTGCCTTATTTGGACA
M4477_1.02 SRF chr1 - 236501219 236501237 6.01e-05 0.171 TTATGGACAGAAAAGGGAA
M4477_1.02 SRF chr10 + 52116069 52116087 6.06e-05 0.171 ccttttccttatttggaca
M4477_1.02 SRF chr11 - 44752313 44752331 6.06e-05 0.171 AAAAGGCTAAAGAAGGCAG
M4477_1.02 SRF chr6 + 7001325 7001343 6.21e-05 0.175 tataggccaaagatgggga
M4477_1.02 SRF chr7 - 133367739 133367757 6.31e-05 0.176 GGGCAGCCCTATAAGGAAG
M4477_1.02 SRF chr13 - 38093785 38093803 6.33e-05 0.176 TTTTGGCCAAAGGTGGCCA
M4477_1.02 SRF chr5 - 41874714 41874732 6.39e-05 0.176 CATTTGCCTTATTTGGGCA
M4477_1.02 SRF chr2 - 190277766 190277784 6.39e-05 0.176 CATTTGCCTTATTTGGGCA
M4477_1.02 SRF chr6 + 159398948 159398966 6.44e-05 0.177 ACAATCCTAAATTTGGCCA
M4477_1.02 SRF chr5 - 79959587 79959605 6.49e-05 0.177 TTATAGACAAAAAAGGGGA
M4477_1.02 SRF chr6 - 118542993 118543011 6.49e-05 0.177 TACTTTCCTTATAAGGTTA
M4477_1.02 SRF chr10 - 121678618 121678636 6.54e-05 0.177 CCCTGCCCATGCAGGGCTA
M4477_1.02 SRF chr3 + 161405137 161405155 6.62e-05 0.179 ctttaaccctatagggaaa
M4477_1.02 SRF chr5 + 149923011 149923029 6.68e-05 0.179 tcatgtccaaatcagacaa
M4477_1.02 SRF chr19 - 33177149 33177167 6.79e-05 0.181 GCAGGAGCAAAAATGGAAA
M4477_1.02 SRF chr13 - 36619599 36619617 6.81e-05 0.181 CCCTCCCCCAACATGGAGA
M4477_1.02 SRF chr1 + 100782802 100782820 6.81e-05 0.181 ttctttcctaataagggtt
M4477_1.02 SRF chrX - 24471838 24471856 6.87e-05 0.181 TCAATGTCAAATAAGGACG
M4477_1.02 SRF chr10 + 2965162 2965180 6.95e-05 0.183 ttgtagacaaaaaaggtaa
M4477_1.02 SRF chr6 - 124924514 124924532 7.07e-05 0.185 AATGATCCAAATAAGGATA
M4477_1.02 SRF chr12 + 118012274 118012292 7.18e-05 0.187 agcctgcccaatatgggga
M4477_1.02 SRF chrX - 136161555 136161573 7.27e-05 0.188 TCATGAACACATAAGGAAA
M4477_1.02 SRF chr2 - 18935255 18935273 7.42e-05 0.189 GTTTTCCCATAAAAGTCAT
M4477_1.02 SRF chr17 - 50309638 50309656 7.42e-05 0.189 CAATGAACAAATAAGACAA
M4477_1.02 SRF chr15 + 49190770 49190788 7.45e-05 0.189 ctgtgttcgaataaggcaa
M4477_1.02 SRF chr10 + 88366766 88366784 7.48e-05 0.189 tttaatccatacaaggaga
M4477_1.02 SRF chr12 - 118012277 118012295 7.48e-05 0.189 GTTTCCCCATATTGGGCAG
M4477_1.02 SRF chr15 - 49191008 49191026 7.6e-05 0.192 ATAACACCAAGTAAGGTCT
M4477_1.02 SRF chr6 - 41242572 41242590 7.75e-05 0.195 AAGTTCCCTTATTTGGCCT
M4477_1.02 SRF chr10 + 44021981 44021999 7.94e-05 0.198 CCATGAATAAATAAGGAAG
M4477_1.02 SRF chr10 + 110049064 110049082 7.97e-05 0.198 ccatggctaaaaggggcca
M4477_1.02 SRF chr3 + 9248455 9248473 8e-05 0.198 CAGAAACCAAAAAGGGGGA
M4477_1.02 SRF chr18 + 9683431 9683449 8e-05 0.198 ccatcccgttaaaaggaaa
M4477_1.02 SRF chr7 - 32540203 32540221 8.07e-05 0.198 ATTTCAGCATAAAAGGGAA
M4477_1.02 SRF chr8 + 653434 653452 8.23e-05 0.201 aactgttccaataaggcaa
M4477_1.02 SRF chr1 - 15130285 15130303 8.26e-05 0.201 GATCATCTAAATAAGGCAA
M4477_1.02 SRF chr1 + 80054256 80054274 8.33e-05 0.202 ctgtggtcaagaatggcca
M4477_1.02 SRF chrX + 136161692 136161710 8.4e-05 0.203 CCAATGCCAATTTAGGAAA
M4477_1.02 SRF chr7 - 17385895 17385913 8.56e-05 0.206 GTTCAATCAAATAAGGCAA
M4477_1.02 SRF chr10 - 17455291 17455309 8.67e-05 0.207 GGTTGCCCATGATTGGCCA
M4477_1.02 SRF chr10 + 69769694 69769712 8.67e-05 0.207 CTCAGCCCATTTATGGCTT
M4477_1.02 SRF chr4 - 38471137 38471155 8.95e-05 0.212 ACCTGGCCAAGCATGGAGT
M4477_1.02 SRF chr5 + 82312331 82312349 8.95e-05 0.212 TTGATTCTAAAAAAGGAAA
M4477_1.02 SRF chr11 + 62108020 62108038 9.05e-05 0.212 TTATTGCCCCAAATGGCCA
M4477_1.02 SRF chr10 - 63930110 63930128 9.05e-05 0.212 CCATTGCCAAGTAAGACTA
M4477_1.02 SRF chr15 - 32057050 32057068 9.12e-05 0.213 CCCATGCCAAGTAAGACAA
M4477_1.02 SRF chr5 - 112711097 112711115 9.23e-05 0.214 CTAACACCAAACAAGCCAA
M4477_1.02 SRF chr1 + 225638066 225638084 9.23e-05 0.214 AAATTTCAaaacaaggcaa
M4477_1.02 SRF chr5 + 134530749 134530767 9.31e-05 0.215 GCCCAACCAAATAAAGCCT
M4477_1.02 SRF chr18 + 23406600 23406618 9.42e-05 0.216 ctacacccaaagaaagcca
M4477_1.02 SRF chr13 + 38419409 38419427 9.42e-05 0.216 ccctgtccctataaagtga
M4477_1.02 SRF chr10 - 36423945 36423963 9.45e-05 0.216 CACTGCCCAAGTAGGGAGG
M4477_1.02 SRF chr6 + 125118717 125118735 9.57e-05 0.217 acctgttcaaataaagcaa
M4477_1.02 SRF chr13 - 30889367 30889385 9.64e-05 0.218 AATTTGCCTTATTTGGACA
M4477_1.02 SRF chr2 - 202411445 202411463 9.72e-05 0.219 TTTTAACCCTACAAGGAAA
M4477_1.02 SRF chr2 - 100909636 100909654 9.75e-05 0.219 CAAAGCCTATGAAAGGAAA
M4477_1.02 SRF chr2 - 150292441 150292459 9.83e-05 0.22 CCATGGCCATATGTGTTAA

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_34 --bgfile /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M4477_1.02 /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_34 MEME file name = /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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