Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATTGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 TATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAAA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACT
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCTGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGATGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATACCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.287 C 0.213 G 0.213 T 0.287


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6147_1.02 ARID3A chr18 - 29008198 29008219 2.26e-07 0.0454 TTAAATTTGACAGTGTTTAATT
M6147_1.02 ARID3A chr13 + 35931121 35931142 2.64e-07 0.0454 TTTCATTTGTTTTCATTTTATC
M6147_1.02 ARID3A chr13 + 32622686 32622707 2.88e-07 0.0454 attattttcatattgtttaata
M6147_1.02 ARID3A chr7 - 124775758 124775779 3.31e-07 0.0454 TTTAATATAATGTTAATTAATT
M6147_1.02 ARID3A chr1 + 67250044 67250065 9.79e-07 0.0944 tttattttaatctaatttaaaa
M6147_1.02 ARID3A chr10 + 5321540 5321561 1.08e-06 0.0944 tttaatttaatttggttgaagt
M6147_1.02 ARID3A chr2 + 212638944 212638965 1.39e-06 0.0944 tttaattagtttttcttttaac
M6147_1.02 ARID3A chr6 - 138444253 138444274 1.43e-06 0.0944 TTTAATTTAAAAGAGTTTAATT
M6147_1.02 ARID3A chr10 - 28399081 28399102 1.68e-06 0.0944 TTAAATTTAAAGCAGTTTAATT
M6147_1.02 ARID3A chr5 + 33479799 33479820 1.72e-06 0.0944 ttaaatttaatagagtttaatg
M6147_1.02 ARID3A chr15 - 66857644 66857665 2.23e-06 0.0958 TTCATTTTAATTTACTTTAATA
M6147_1.02 ARID3A chr7 - 159317559 159317580 2.42e-06 0.0958 TTTAATTTAACAAAATTTAATT
M6147_1.02 ARID3A chr14 + 80050894 80050915 2.54e-06 0.0958 ttaaatttaaaagagtttaatt
M6147_1.02 ARID3A chr4 - 184234474 184234495 2.54e-06 0.0958 TTAAATTTAAAAGAGTTTAATT
M6147_1.02 ARID3A chr6 - 117440688 117440709 2.71e-06 0.0958 TTAAATTTAATTTGCCTTAAGT
M6147_1.02 ARID3A chr1 + 230620715 230620736 2.99e-06 0.0958 tttatttttctttcaTGTAAAC
M6147_1.02 ARID3A chr1 + 192977177 192977198 3.22e-06 0.0958 TTTATTTACATTTCAATGAATA
M6147_1.02 ARID3A chr18 + 61772453 61772474 3.71e-06 0.0958 ttaaatttaacagagtttaatt
M6147_1.02 ARID3A chr13 - 45867652 45867673 3.71e-06 0.0958 TTAAATTTAACAGAGTTTAATT
M6147_1.02 ARID3A chr6 - 109189249 109189270 3.71e-06 0.0958 TTAAATTTAACAGAGTTTAATT
M6147_1.02 ARID3A chr5 - 143506278 143506299 3.78e-06 0.0958 TTTTGTTTGATTTGGTTTTATT
M6147_1.02 ARID3A chr17 - 71842968 71842989 4.01e-06 0.0958 TTAAACTTAATTTCATTTTATC
M6147_1.02 ARID3A chr5 - 101393991 101394012 4.01e-06 0.0958 TTAAATGTAAAATAGTTTAATT
M6147_1.02 ARID3A chr1 - 67831784 67831805 4.28e-06 0.0969 TTTGTTTTGTTTTTGTTTTTTT
M6147_1.02 ARID3A chr12 - 99686527 99686548 4.41e-06 0.0969 TTAAATTTAATGTAGCTTAATT
M6147_1.02 ARID3A chr8 + 653633 653654 5.28e-06 0.106 ttaaatttaattcagttgaagt
M6147_1.02 ARID3A chr10 + 61159512 61159533 5.28e-06 0.106 ttaaatttaattcagttgaagt
M6147_1.02 ARID3A chr10 - 21725051 21725072 5.4e-06 0.106 TTTGTTTTGTTTTTATTTTAAA
M6147_1.02 ARID3A chr20 - 44320004 44320025 6.87e-06 0.13 TTTGTTTTATTTTGGTTTTATG
M6147_1.02 ARID3A chr6 - 41242722 41242743 7.79e-06 0.135 TAAAATTTTAAACAGATTATTT
M6147_1.02 ARID3A chr18 - 390041 390062 8.38e-06 0.135 TTTGTTTATTTATGCTTTAATA
M6147_1.02 ARID3A chr7 + 124775429 124775450 8.74e-06 0.135 tgtgtTTTATTTTCAATTTATT
M6147_1.02 ARID3A chr12 - 58918826 58918847 8.74e-06 0.135 TTTAATAAGCCTTAGTTTAATA
M6147_1.02 ARID3A chr7 - 103048840 103048861 9.2e-06 0.135 TAAATTTTTACCTAGTTTAATG
M6147_1.02 ARID3A chr10 - 61159500 61159521 9.24e-06 0.135 TTAAATTTAAAGAAGTTTAATT
M6147_1.02 ARID3A chr2 + 230396337 230396358 9.97e-06 0.135 ataaatttaatagcatttattg
M6147_1.02 ARID3A chr1 - 32151929 32151950 1.02e-05 0.135 TGTATTTTAATACTATTTCATT
M6147_1.02 ARID3A chr15 + 32056797 32056818 1.03e-05 0.135 TGAAATTAAAATGCCTTTAATT
M6147_1.02 ARID3A chr4 - 54598665 54598686 1.06e-05 0.135 ATTATTTATTTATTAATTTATT
M6147_1.02 ARID3A chr6 + 32799312 32799333 1.08e-05 0.135 tgaaatttattttgatttattt
M6147_1.02 ARID3A chr3 - 168736033 168736054 1.1e-05 0.135 TTTAATTTTTTTTAATTTATAT
M6147_1.02 ARID3A chr7 + 159317556 159317577 1.16e-05 0.135 cttaattaaattttgttaaatt
M6147_1.02 ARID3A chr6 - 17901713 17901734 1.22e-05 0.135 TAAAATTTTAAATAATTTATTT
M6147_1.02 ARID3A chr8 + 583244 583265 1.25e-05 0.135 ttaaatttaaaggagtttaatt
M6147_1.02 ARID3A chr10 + 2965052 2965073 1.25e-05 0.135 ttaaatttaaaggagtttaatt
M6147_1.02 ARID3A chr12 + 92650585 92650606 1.25e-05 0.135 ttaaatttaaaggagtttaatt
M6147_1.02 ARID3A chr6 + 148597214 148597235 1.25e-05 0.135 ttaaatttaaaggagtttaatt
M6147_1.02 ARID3A chr8 - 653621 653642 1.25e-05 0.135 TTAAATTTAAAGGAGTTTAATT
M6147_1.02 ARID3A chr10 - 17433073 17433094 1.25e-05 0.135 TTAAATTTAAAGGAGTTTAATT
M6147_1.02 ARID3A chr5 - 43599170 43599191 1.25e-05 0.135 TTAAATTTAAAGGAGTTTAATT
M6147_1.02 ARID3A chr6 + 32799311 32799332 1.27e-05 0.135 atgaaatttattttgatttatt
M6147_1.02 ARID3A chr8 - 25019924 25019945 1.28e-05 0.135 CTTATTATAAATTTAATTTATC
M6147_1.02 ARID3A chr1 - 67250048 67250069 1.33e-05 0.138 ATTGTTTTAAATTAGATTAAAA
M6147_1.02 ARID3A chr7 + 124775434 124775455 1.37e-05 0.138 TTTATTTTCAATTTATTGAAAC
M6147_1.02 ARID3A chr9 + 1653313 1653334 1.41e-05 0.138 ATTGTTTGGATTTCGATTATTA
M6147_1.02 ARID3A chr8 - 19066311 19066332 1.41e-05 0.138 TAGAATTAAAATTTCTTTAAAG
M6147_1.02 ARID3A chr3 - 168736048 168736069 1.45e-05 0.139 ATGATTTTTCCCCTGTTTAATT
M6147_1.02 ARID3A chr2 + 149768508 149768529 1.47e-05 0.139 TTAATTTAAGTTCTGTTTTAAT
M6147_1.02 ARID3A chr18 + 3441659 3441680 1.49e-05 0.139 ttacatttcattcagatgaatt
M6147_1.02 ARID3A chr9 + 108757082 108757103 1.66e-05 0.152 ttaattttaaaggagtttaatt
M6147_1.02 ARID3A chr11 + 10314640 10314661 1.78e-05 0.152 ttaaatttaacatagtttaact
M6147_1.02 ARID3A chr3 - 143864583 143864604 1.8e-05 0.152 TATCTTTTAACACTATTTATTT
M6147_1.02 ARID3A chr9 + 81906776 81906797 1.87e-05 0.152 ttaaatttaaaggaatttaatt
M6147_1.02 ARID3A chr6 + 124607486 124607507 1.93e-05 0.152 ctaaattagatttcaatttgtt
M6147_1.02 ARID3A chr7 + 17385638 17385659 1.95e-05 0.152 ttaaatttttttatggttaatt
M6147_1.02 ARID3A chr12 + 76202984 76203005 2.02e-05 0.152 tagacttacatttcattttatt
M6147_1.02 ARID3A chr5 + 10288578 10288599 2.05e-05 0.152 AGTATTTTGCTTGCATTTATTT
M6147_1.02 ARID3A chr10 + 17433085 17433106 2.06e-05 0.152 ttaaatttaatttggctgaagt
M6147_1.02 ARID3A chr5 + 43599182 43599203 2.06e-05 0.152 ttaaatttaatttggctgaagt
M6147_1.02 ARID3A chr6 + 132524920 132524941 2.06e-05 0.152 ttaaatttaatttggctgaagt
M6147_1.02 ARID3A chr10 - 2965040 2965061 2.06e-05 0.152 TTAAATTTAATTTGGCTGAAGT
M6147_1.02 ARID3A chr6 - 28956227 28956248 2.06e-05 0.152 TATGATTTTACACCAAGTAAAC
M6147_1.02 ARID3A chr9 - 81906764 81906785 2.06e-05 0.152 TTAAATTTAATTTGGCTGAAGT
M6147_1.02 ARID3A chrX - 102902479 102902500 2.06e-05 0.152 TTAAATTTAATTTGGCTGAAGT
M6147_1.02 ARID3A chr14 - 80050882 80050903 2.1e-05 0.152 TTAAATTTAATTCGGCTGAAGT
M6147_1.02 ARID3A chr6 - 83868935 83868956 2.12e-05 0.152 TTTTTTGAAATACCATTTATTC
M6147_1.02 ARID3A chr6 - 138444263 138444284 2.13e-05 0.152 TTTTTTTTTTTTTAATTTAAAA
M6147_1.02 ARID3A chr3 - 99868622 99868643 2.19e-05 0.154 TAAGTTTAAAAACCCATTATTT
M6147_1.02 ARID3A chr3 + 60107653 60107674 2.26e-05 0.157 taagttctgttttcctttaata
M6147_1.02 ARID3A chr4 - 141859826 141859847 2.37e-05 0.163 TAAAATTTAAACTTAATCAATC
M6147_1.02 ARID3A chr20 + 11888750 11888771 2.47e-05 0.167 tttaaATAtatgtcaattaaaa
M6147_1.02 ARID3A chr3 + 104903102 104903123 2.52e-05 0.168 aagtttttgtttttaattattt
M6147_1.02 ARID3A chr6 - 104799497 104799518 2.67e-05 0.172 TAAATTTAAAGTTTATTTAAAT
M6147_1.02 ARID3A chr8 - 95178161 95178182 2.73e-05 0.172 TTAAATTTGGCAGTGTTTATTT
M6147_1.02 ARID3A chr13 - 25059324 25059345 2.74e-05 0.172 TTAAATTTATTTTCCTTAAAGT
M6147_1.02 ARID3A chr6 + 117440700 117440721 2.75e-05 0.172 ttaaatttaacagagtttattt
M6147_1.02 ARID3A chr7 + 141513862 141513883 2.75e-05 0.172 ttaaatttaacagagtttattt
M6147_1.02 ARID3A chr12 - 96057016 96057037 2.75e-05 0.172 TTAAATTTAACAGAGTTTATTT
M6147_1.02 ARID3A chr5 - 110054636 110054657 2.79e-05 0.172 CAAAATTTTTTATCAATTTAAC
M6147_1.02 ARID3A chr6 + 159398928 159398949 2.84e-05 0.173 ttaatttttctaaggttttAAC
M6147_1.02 ARID3A chr16 + 19566525 19566546 2.9e-05 0.175 ttaaatttaatggagcttaatt
M6147_1.02 ARID3A chr9 + 123772692 123772713 2.96e-05 0.177 TTTGATTTTTTAACATTTTAAT
M6147_1.02 ARID3A chr5 - 34436677 34436698 3.01e-05 0.177 TTTATTTATTTATTATTTTTTT
M6147_1.02 ARID3A chr6 + 104799499 104799520 3.03e-05 0.177 ttaaataaactttaaatttatt
M6147_1.02 ARID3A chr10 + 5549580 5549601 3.11e-05 0.178 acgaattaaatttaaattaatc
M6147_1.02 ARID3A chr18 + 30766231 30766252 3.11e-05 0.178 ataaatttaaaggagtttaatt
M6147_1.02 ARID3A chr5 - 106435134 106435155 3.26e-05 0.18 TTTATTTACATACTAAGTTATA
M6147_1.02 ARID3A chr2 - 230296990 230297011 3.28e-05 0.18 ATAAATTTTATTTTGTCTAAAG
M6147_1.02 ARID3A chr9 + 706624 706645 3.32e-05 0.18 TTTGTTTTTCTTTCATTTTTTA
M6147_1.02 ARID3A chr11 + 92092876 92092897 3.32e-05 0.18 TAAAAAAAGATATTATTTATTT
M6147_1.02 ARID3A chr9 + 101504394 101504415 3.36e-05 0.18 tttaaattaaatttgttgaaac
M6147_1.02 ARID3A chr12 + 25395295 25395316 3.37e-05 0.18 AATAATTAGCTATTTTTTAAAT
M6147_1.02 ARID3A chr4 - 141859602 141859623 3.42e-05 0.18 TAAACTTTTAAAATGATTAATG
M6147_1.02 ARID3A chr9 - 86176943 86176964 3.45e-05 0.18 TTTGTTTTGTTTTGTTTTAAGA
M6147_1.02 ARID3A chr6 - 20326557 20326578 3.46e-05 0.18 TAACATTTTAAAGAGTTTAATT
M6147_1.02 ARID3A chr3 + 25085580 25085601 3.49e-05 0.18 ATTCATTTATCTTCCTTTATTC
M6147_1.02 ARID3A chr7 + 103048800 103048821 3.51e-05 0.18 tttagctttattctatttaatt
M6147_1.02 ARID3A chr13 + 38419467 38419488 3.55e-05 0.18 ttaaatttagcagagtttaatt
M6147_1.02 ARID3A chr10 - 17455478 17455499 3.58e-05 0.18 TTAAATTTAGCACAGTTTATTC
M6147_1.02 ARID3A chr4 + 31221075 31221096 3.66e-05 0.181 ttaaattttacagagtttattt
M6147_1.02 ARID3A chr2 + 202411292 202411313 3.76e-05 0.181 ttttattagcaattcatgaatc
M6147_1.02 ARID3A chr1 + 241456913 241456934 3.76e-05 0.181 ttttattagcaattcatgaatc
M6147_1.02 ARID3A chr6 - 40904965 40904986 3.76e-05 0.181 TTTTATTAGCAATTCATGAATC
M6147_1.02 ARID3A chr1 - 111496696 111496717 3.76e-05 0.181 TAAAATTTTAATGAGTTTATTT
M6147_1.02 ARID3A chr5 + 14264549 14264570 3.86e-05 0.183 TATGTTTTGATTTTTTTTTTTT
M6147_1.02 ARID3A chr1 + 56400933 56400954 3.87e-05 0.183 tgagttttgttttcttttaaat
M6147_1.02 ARID3A chr3 - 14080382 14080403 4.04e-05 0.184 TTAAATTTAATTCGGCTGAAGA
M6147_1.02 ARID3A chr9 - 111516437 111516458 4.04e-05 0.184 TTAAATTTGACAGAGTTTTTTT
M6147_1.02 ARID3A chr6 + 124607223 124607244 4.11e-05 0.184 TTTAACTATATATtatttaaag
M6147_1.02 ARID3A chr10 + 5549617 5549638 4.13e-05 0.184 tttcatttgaaatgaattgagt
M6147_1.02 ARID3A chr1 + 230620836 230620857 4.16e-05 0.184 ttttattagcaattcatgaatt
M6147_1.02 ARID3A chr8 - 19066112 19066133 4.16e-05 0.184 TTTTATTAGCAATTCATGAATT
M6147_1.02 ARID3A chr14 - 49858745 49858766 4.16e-05 0.184 TTAAATTTGTTTACTAGTAATA
M6147_1.02 ARID3A chr8 - 95222361 95222382 4.16e-05 0.184 TTTTATTAGCAATTCATGAATT
M6147_1.02 ARID3A chr6 - 112308366 112308387 4.25e-05 0.185 TAAGTTTTATTTTCTTTTAAAT
M6147_1.02 ARID3A chr5 + 84681041 84681062 4.28e-05 0.185 ataaatttaacaggatttattt
M6147_1.02 ARID3A chr1 - 80579266 80579287 4.28e-05 0.185 TTAAATTTGGTGAAGATTATTT
M6147_1.02 ARID3A chr4 + 147827662 147827683 4.4e-05 0.188 TTAAATTTTTTTTAACTTAAAA
M6147_1.02 ARID3A chr5 + 14264544 14264565 4.48e-05 0.19 TGTATTATGTTTTGATTTTTTT
M6147_1.02 ARID3A chr13 + 45867669 45867690 4.49e-05 0.19 tttaatttgactacggtttttc
M6147_1.02 ARID3A chr16 + 19095080 19095101 4.56e-05 0.191 ttaaatttaacagagttgaatt
M6147_1.02 ARID3A chr6 - 112308367 112308388 4.65e-05 0.191 TTAAGTTTTATTTTCTTTTAAA
M6147_1.02 ARID3A chr4 - 54598669 54598690 4.66e-05 0.191 TTTTATTATTTATTTATTAATT
M6147_1.02 ARID3A chr6 + 82239691 82239712 4.68e-05 0.191 tatattttctttgtctttattc
M6147_1.02 ARID3A chr6 - 148597202 148597223 4.7e-05 0.191 TTAAATTTAATTCAGCTGAAGT
M6147_1.02 ARID3A chr3 + 60107408 60107429 4.84e-05 0.191 taaaattttaaagagtttattt
M6147_1.02 ARID3A chr12 + 99912008 99912029 4.84e-05 0.191 taaaattttaaagagtttattt
M6147_1.02 ARID3A chr6 - 52728661 52728682 4.84e-05 0.191 TAAAATTTTAAAGAGTTTATTT
M6147_1.02 ARID3A chr14 - 101089796 101089817 4.84e-05 0.191 TAAAATTTTAAAGAGTTTATTT
M6147_1.02 ARID3A chr6 - 124607221 124607242 4.87e-05 0.191 TTAAATAATATATAGTTAAATC
M6147_1.02 ARID3A chr1 + 204495703 204495724 5.07e-05 0.198 ataaatttgttatgcttttctc
M6147_1.02 ARID3A chr5 + 131305149 131305170 5.23e-05 0.198 cataattattttgagattaatc
M6147_1.02 ARID3A chr1 + 125180360 125180381 5.24e-05 0.198 TTCCATTAGATTCCATTTGATG
M6147_1.02 ARID3A chr1 + 60173235 60173256 5.26e-05 0.198 attctatttaattcgtttaagc
M6147_1.02 ARID3A chr10 + 76287974 76287995 5.3e-05 0.198 TTTAATTTCCAGTTCATTTATT
M6147_1.02 ARID3A chr14 + 70343387 70343408 5.32e-05 0.198 attattgtttttttgtttaagg
M6147_1.02 ARID3A chr9 - 26950830 26950851 5.32e-05 0.198 TTATTTCAGTTATTCATTAATT
M6147_1.02 ARID3A chrX - 134938741 134938762 5.4e-05 0.198 TTTCACTTGTTTTTATTTATTT
M6147_1.02 ARID3A chr5 - 106493922 106493943 5.44e-05 0.198 TGTGTTTTTACCTTGTGTAATC
M6147_1.02 ARID3A chr6 + 85373287 85373308 5.46e-05 0.198 TTATTTATTTTTTTCATTATTT
M6147_1.02 ARID3A chr1 - 94938064 94938085 5.48e-05 0.198 TGTTATTTTATATTCATTGATT
M6147_1.02 ARID3A chr6 + 104799483 104799504 5.5e-05 0.198 atgaattgtttttcatttaaat
M6147_1.02 ARID3A chr6 + 104799494 104799515 5.54e-05 0.198 ttcatttaaataaactttaaat
M6147_1.02 ARID3A chr1 + 19619315 19619336 5.58e-05 0.198 TTATGTTTGCTTCTAATTATTT
M6147_1.02 ARID3A chr6 + 82239842 82239863 5.58e-05 0.198 tttcttttaataATGTATAATA
M6147_1.02 ARID3A chr18 + 23406796 23406817 5.68e-05 0.2 aaagtttttcttttctttattt
M6147_1.02 ARID3A chr5 + 117039408 117039429 5.74e-05 0.2 gaacatttgattccctttgatt
M6147_1.02 ARID3A chr5 - 144014056 144014077 5.78e-05 0.2 TTTCTTTTTCTGTCCATTAAGG
M6147_1.02 ARID3A chr6 + 109189246 109189267 5.83e-05 0.2 cttaattaaactctgttaaatt
M6147_1.02 ARID3A chr17 - 50309803 50309824 5.83e-05 0.2 TTTTTTTTAAATGAGTTTATTT
M6147_1.02 ARID3A chr8 + 95178178 95178199 5.93e-05 0.2 tttaatttgtctcctttttttt
M6147_1.02 ARID3A chr5 + 79959693 79959714 5.98e-05 0.2 ttaaacttctttacatttaatt
M6147_1.02 ARID3A chr1 + 60173226 60173247 6e-05 0.2 ctcaaataaattctatttaatt
M6147_1.02 ARID3A chr3 - 60107316 60107337 6.08e-05 0.2 TTTAATTTTTTTTAGTTTTGTT
M6147_1.02 ARID3A chr7 + 120733829 120733850 6.13e-05 0.2 AATAATAAGATTAAGATTATAT
M6147_1.02 ARID3A chr18 - 23406767 23406788 6.17e-05 0.2 ATAAATTTAACAGAGATTATTT
M6147_1.02 ARID3A chr10 - 90572100 90572121 6.26e-05 0.2 TAAAATTTAACAGAGCTTAATT
M6147_1.02 ARID3A chr11 - 44752496 44752517 6.31e-05 0.2 TTTGTTTTTATTGTGATTCATG
M6147_1.02 ARID3A chr7 - 142955197 142955218 6.35e-05 0.2 TTTTTTAAAATGTTAATTATTT
M6147_1.02 ARID3A chr10 - 34032912 34032933 6.42e-05 0.2 ATTTTTATGTATTTATTTATTT
M6147_1.02 ARID3A chr3 - 141180195 141180216 6.44e-05 0.2 ATAAATTTAACAGAGTTTATTT
M6147_1.02 ARID3A chr1 - 168341425 168341446 6.44e-05 0.2 ATAAATTTAACAGAGTTTATTT
M6147_1.02 ARID3A chr3 + 177614286 177614307 6.47e-05 0.2 ttaagtttcatttcttttaaat
M6147_1.02 ARID3A chr10 - 5662735 5662756 6.49e-05 0.2 TGGATTTAGCCCCCATTTTATT
M6147_1.02 ARID3A chr10 + 44801688 44801709 6.51e-05 0.2 ttcaaattttaaccaattaatt
M6147_1.02 ARID3A chr2 + 230297001 230297022 6.56e-05 0.2 ataaaatttatagcatttattt
M6147_1.02 ARID3A chr10 - 104235787 104235808 6.56e-05 0.2 TAGAATTTAATAACAAGTATAC
M6147_1.02 ARID3A chr6 + 124607145 124607166 6.58e-05 0.2 CTGGTTTTGGAATAATTTAATC
M6147_1.02 ARID3A chr5 - 82312339 82312360 6.58e-05 0.2 TTTGTTTTGTTTTTCCTTTTTT
M6147_1.02 ARID3A chr8 - 124339495 124339516 6.61e-05 0.2 TTAAATATAACAAAGTTTATTT
M6147_1.02 ARID3A chr1 + 89710401 89710422 6.65e-05 0.2 tttctttatatttattttaaac
M6147_1.02 ARID3A chr11 - 130543552 130543573 6.65e-05 0.2 TATATTTTAATACTCCTTTTTA
M6147_1.02 ARID3A chr6 + 104799504 104799525 6.68e-05 0.2 taaactttaaatttattttttc
M6147_1.02 ARID3A chr12 - 118012163 118012184 6.73e-05 0.201 TTTTATTTTCAATTCATGAATT
M6147_1.02 ARID3A chr9 + 37086931 37086952 6.77e-05 0.201 TTGCTTTTTATTTCATGGAATA
M6147_1.02 ARID3A chr5 - 33313538 33313559 6.82e-05 0.201 ATACATGTGATTGCATTTAAGG
M6147_1.02 ARID3A chr6 + 52728787 52728808 6.9e-05 0.201 AAAGCTGTGATTTTATTTTATT
M6147_1.02 ARID3A chr10 + 76337679 76337700 6.92e-05 0.201 taaaattttaaagaatttattt
M6147_1.02 ARID3A chr3 + 104903436 104903457 6.92e-05 0.201 ttttttctgattttgtgtattt
M6147_1.02 ARID3A chr6 + 157376886 157376907 6.99e-05 0.201 ttcaatttaaaatagtttaact
M6147_1.02 ARID3A chr5 + 101393993 101394014 7.02e-05 0.201 ttaaactattttacatttaatt
M6147_1.02 ARID3A chr1 - 241240657 241240678 7.04e-05 0.201 ATGATTATATTTTTAATTATAC
M6147_1.02 ARID3A chr9 + 106878974 106878995 7.12e-05 0.202 TTTAATAAAGTAAAGTTTAATG
M6147_1.02 ARID3A chr12 - 56079029 56079050 7.25e-05 0.205 TTGCATTTCAAATCCCTTAAAC
M6147_1.02 ARID3A chr6 + 83868789 83868810 7.27e-05 0.205 TGTAATATGATATGTTTTATTG
M6147_1.02 ARID3A chr2 + 100909626 100909647 7.46e-05 0.205 TTTGCTGTGATTTCCTTTCATA
M6147_1.02 ARID3A chr4 + 141859828 141859849 7.46e-05 0.205 ttgattaagtttaaattttatc
M6147_1.02 ARID3A chr1 - 67250042 67250063 7.46e-05 0.205 TTAAATTAGATTAAAATAAAGC
M6147_1.02 ARID3A chr12 + 76202906 76202927 7.51e-05 0.205 ttatctattttattgattaaac
M6147_1.02 ARID3A chr12 - 99911936 99911957 7.51e-05 0.205 TATTATTTATTGCCATTTATAT
M6147_1.02 ARID3A chr11 + 14029838 14029859 7.56e-05 0.205 ttgtatatgaattcatataaac
M6147_1.02 ARID3A chr1 + 56400828 56400849 7.64e-05 0.205 atcaattagttaaagtttaaac
M6147_1.02 ARID3A chr14 - 24425690 24425711 7.64e-05 0.205 TATAATGAGATATTAATTAGGC
M6147_1.02 ARID3A chr5 + 14264476 14264497 7.67e-05 0.205 ATTCATTTTATATGCATTTTAT
M6147_1.02 ARID3A chrX - 136161735 136161756 7.75e-05 0.205 ATAAATATTTTTTTATTTCATC
M6147_1.02 ARID3A chr5 - 79959691 79959712 7.78e-05 0.205 TTAAATGTAAAGAAGTTTAATT
M6147_1.02 ARID3A chr13 + 32622718 32622739 7.81e-05 0.205 attaatttttttctgataattt
M6147_1.02 ARID3A chr11 + 62108303 62108324 7.81e-05 0.205 TATGTTTTAACATGTTTTAATG
M6147_1.02 ARID3A chr4 - 54598649 54598670 7.81e-05 0.205 TTTATTATTATTATTATTATTT
M6147_1.02 ARID3A chr1 + 111496708 111496729 7.92e-05 0.207 taaaattttaatgtgcttaagt
M6147_1.02 ARID3A chr6 - 93008322 93008343 7.94e-05 0.207 TTAAATTAGATTTTGGTTTGTT
M6147_1.02 ARID3A chr18 - 9431434 9431455 8.06e-05 0.208 TTTAATGTGCCTTAGTTTATAT
M6147_1.02 ARID3A chr15 + 32056801 32056822 8.11e-05 0.208 ATTAAAATGCCTTTAATTAAAT
M6147_1.02 ARID3A chr6 - 123364170 123364191 8.11e-05 0.208 TTATATTTAACACAGTTTAACT
M6147_1.02 ARID3A chr13 + 25059552 25059573 8.14e-05 0.208 tttatgttggtaccatttatgc
M6147_1.02 ARID3A chr4 - 38967647 38967668 8.17e-05 0.208 ATTTTCTTGCTTTTATTTAAAT
M6147_1.02 ARID3A chr5 - 128782723 128782744 8.28e-05 0.21 ATAAATATGCAATTCATGAATA
M6147_1.02 ARID3A chr12 + 120814034 120814055 8.43e-05 0.212 tgatttaagatttactttaaaa
M6147_1.02 ARID3A chr1 + 223056908 223056929 8.55e-05 0.214 ttaaatttaagggagtttaatt
M6147_1.02 ARID3A chr7 - 120733809 120733830 8.58e-05 0.214 TTTATTATTTTCCCCATTTTAC
M6147_1.02 ARID3A chr11 + 118320566 118320587 8.61e-05 0.214 tttcttttctttttcttttttc
M6147_1.02 ARID3A chr5 + 101394003 101394024 8.67e-05 0.214 ttacatttaatttggctgaagt
M6147_1.02 ARID3A chr18 - 30766219 30766240 8.73e-05 0.215 TTAAATTTATTTTGGCTGAAGT
M6147_1.02 ARID3A chr16 - 25015915 25015936 8.85e-05 0.216 TTTAATTTTTTTTTTTTTTTTT
M6147_1.02 ARID3A chr6 - 112308599 112308620 8.88e-05 0.216 TAAAATTTTAAAGAGTTTATTA
M6147_1.02 ARID3A chr18 + 8308014 8308035 8.91e-05 0.216 AAAAATTAGACtttttttattt
M6147_1.02 ARID3A chr6 + 117440993 117441014 8.98e-05 0.217 tttatttaagtactaagttata
M6147_1.02 ARID3A chr8 - 583105 583126 9.13e-05 0.219 TTGAATTAGAAGAGATTTTATG
M6147_1.02 ARID3A chr2 - 212638931 212638952 9.13e-05 0.219 CTAATTAAATTAATCTTTAATC
M6147_1.02 ARID3A chr9 + 37086920 37086941 9.17e-05 0.219 TTGATTTTTCTTTGCTTTTTAT
M6147_1.02 ARID3A chr13 - 30889243 30889264 9.2e-05 0.219 TTTGTTTATATACCAAGTTAAG
M6147_1.02 ARID3A chr15 + 81525701 81525722 9.26e-05 0.219 TATGTTTTTTTTTAAAGTAATG
M6147_1.02 ARID3A chr4 + 126987175 126987196 9.36e-05 0.22 tttgtttttataatcagttata
M6147_1.02 ARID3A chr14 - 92224843 92224864 9.42e-05 0.22 TTAAATTTAAAGGAGTGTAATT
M6147_1.02 ARID3A chr6 - 117440661 117440682 9.42e-05 0.22 TTTTTTTTTTTTACATTTTTTT
M6147_1.02 ARID3A chr9 - 4657542 4657563 9.46e-05 0.22 TTTCTTTTCTTTTTCTTTTTTT
M6147_1.02 ARID3A chr5 + 123297940 123297961 9.52e-05 0.22 taaaatttcaaagagtttattt
M6147_1.02 ARID3A chr11 - 10314748 10314769 9.62e-05 0.222 TTTGTTTTTCTGTCCATAAATC
M6147_1.02 ARID3A chr9 - 26950563 26950584 9.72e-05 0.222 TTTTTGTTGTTGTCGTTTTATT
M6147_1.02 ARID3A chr5 - 117039197 117039218 9.72e-05 0.222 TTTAACTCTATTACATTTAATT
M6147_1.02 ARID3A chr12 - 58918801 58918822 9.92e-05 0.226 TAGAATTAGTATTGGATTGATA

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_31 --bgfile /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6147_1.02 /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_31 MEME file name = /srv/scratch/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF549.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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