#Query ID Target ID Optimal offset p-value E-value q-value Overlap Query consensus Target consensus Orientation 1 1 0 6.7078e-39 1.94526e-37 3.89052e-37 16 TTGGCACGGTGCCAAG TTGGCACGGTGCCAAG + 1 5 0 3.41171e-11 9.89395e-10 6.59597e-10 15 TTGGCACGGTGCCAAG TTGGCACCGTGCCAA - 1 4 0 7.17614e-11 2.08108e-09 8.32432e-10 15 TTGGCACGGTGCCAAG CTGGCACTGTGCCAA - 1 6 0 1.33045e-09 3.85832e-08 1.10238e-08 15 TTGGCACGGTGCCAAG TTGGCACCGTGCCAA + 1 9 0 2.23748e-07 6.48871e-06 1.44193e-06 7 TTGGCACGGTGCCAAG TTGGCAC - 1 14 -10 1.67972e-05 0.000487119 8.85672e-05 6 TTGGCACGGTGCCAAG GCCAAG - 1 12 -9 0.000846643 0.0245527 0.00377733 6 TTGGCACGGTGCCAAG TGCCAA + 1 17 -1 0.0127447 0.369596 0.0492794 11 TTGGCACGGTGCCAAG CGCCAAGGAGC + 1 23 -1 0.0236034 0.684498 0.0855623 15 TTGGCACGGTGCCAAG AGGCCACGTGCCGGAT + 1 18 2 0.0258531 0.749741 0.0882048 7 TTGGCACGGTGCCAAG GGTGGGCAT + 2 2 0 0 0 0 22 TGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTG + 2 3 -5 3.08984e-10 8.96054e-09 8.96054e-09 16 TGTGTGTGTGTGTGTGTGTGTG GTGTGTGTGTGTGTGT - 3 3 0 4.2039e-45 1.21913e-43 2.43826e-43 16 ACACACACACACACAC ACACACACACACACAC + 3 2 1 1.01667e-09 2.94835e-08 2.94835e-08 16 ACACACACACACACAC CACACACACACACACACACACA - 4 4 0 1.76666e-36 5.12332e-35 1.02466e-34 15 TTGGCACAGTGCCAG TTGGCACAGTGCCAG + 4 5 0 2.58866e-28 7.50713e-27 7.50713e-27 15 TTGGCACAGTGCCAG TTGGCACGGTGCCAA + 4 6 0 1.47934e-15 4.2901e-14 1.71604e-14 15 TTGGCACAGTGCCAG TTGGCACCGTGCCAA + 4 1 1 1.08871e-09 3.15726e-08 9.02074e-09 15 TTGGCACAGTGCCAG CTTGGCACCGTGCCAA - 4 12 0 3.71628e-05 0.00107772 0.000239494 6 TTGGCACAGTGCCAG TTGGCA - 4 9 -8 0.000834068 0.024188 0.00439781 7 TTGGCACAGTGCCAG GTGCCAA + 4 14 1 0.00276405 0.0801575 0.0123319 5 TTGGCACAGTGCCAG CTTGGC + 4 17 -3 0.00777886 0.225587 0.0322267 11 TTGGCACAGTGCCAG GCTCCTTGGCG - 4 29 2 0.00963027 0.279278 0.0349097 15 TTGGCACAGTGCCAG TGTTGTGTCCGTGCCATCTGG + 4 18 2 0.0113322 0.328634 0.0386628 7 TTGGCACAGTGCCAG GGTGGGCAT + 4 27 0 0.0145192 0.421057 0.0428072 13 TTGGCACAGTGCCAG TTGACAGCTGTCA - 4 23 -1 0.0160303 0.46488 0.0428072 14 TTGGCACAGTGCCAG AGGCCACGTGCCGGAT + 4 25 2 0.0162372 0.470879 0.0428072 8 TTGGCACAGTGCCAG GTTTGGCGCG - 4 26 -5 0.0227555 0.659909 0.0573834 9 TTGGCACAGTGCCAG GGGTTGCCC + 4 28 6 0.04413 1.27977 0.0947978 13 TTGGCACAGTGCCAG CCGCGGTTGCCATGGCAAC - 5 5 0 2.23924e-35 6.49381e-34 1.29876e-33 15 TTGGCACGGTGCCAA TTGGCACGGTGCCAA + 5 4 0 6.5606e-27 1.90257e-25 1.90257e-25 15 TTGGCACGGTGCCAA TTGGCACAGTGCCAG + 5 6 0 3.67016e-16 1.06435e-14 4.25739e-15 15 TTGGCACGGTGCCAA TTGGCACCGTGCCAA + 5 1 1 5.35972e-10 1.55432e-08 4.44091e-09 15 TTGGCACGGTGCCAA CTTGGCACCGTGCCAA - 5 12 0 3.59141e-05 0.00104151 0.000231446 6 TTGGCACGGTGCCAA TTGGCA - 5 9 -8 0.00108873 0.0315732 0.00574058 7 TTGGCACGGTGCCAA GTGCCAA + 5 14 1 0.00270347 0.0784005 0.0120616 5 TTGGCACGGTGCCAA CTTGGC + 5 17 -1 0.0088482 0.256598 0.0341747 11 TTGGCACGGTGCCAA CGCCAAGGAGC + 5 29 2 0.00907851 0.263277 0.0341747 15 TTGGCACGGTGCCAA TGTTGTGTCCGTGCCATCTGG + 5 18 2 0.0100167 0.290485 0.0341747 7 TTGGCACGGTGCCAA GGTGGGCAT + 5 27 0 0.0132159 0.383261 0.0392899 13 TTGGCACGGTGCCAA TTGACAGCTGTCA - 5 25 2 0.0135483 0.392899 0.0392899 8 TTGGCACGGTGCCAA GTTTGGCGCG - 5 23 -1 0.0220781 0.640264 0.0582059 14 TTGGCACGGTGCCAA AGGCCACGTGCCGGAT + 5 26 -5 0.0248525 0.720722 0.0586592 9 TTGGCACGGTGCCAA GGGTTGCCC + 6 6 0 1.09618e-38 3.17892e-37 6.35784e-37 15 TTGGCACCGTGCCAA TTGGCACCGTGCCAA + 6 5 0 3.10666e-18 9.00932e-17 9.00932e-17 15 TTGGCACCGTGCCAA TTGGCACGGTGCCAA + 6 4 0 1.24306e-17 3.60487e-16 2.40325e-16 15 TTGGCACCGTGCCAA TTGGCACAGTGCCAG + 6 1 0 9.69324e-09 2.81104e-07 8.03154e-08 15 TTGGCACCGTGCCAA TTGGCACGGTGCCAAG + 6 12 0 1.42134e-07 4.12188e-06 9.15973e-07 6 TTGGCACCGTGCCAA TTGGCA - 6 9 0 0.00176918 0.0513063 0.00872705 7 TTGGCACCGTGCCAA TTGGCAC - 6 29 4 0.0018056 0.0523623 0.00872705 15 TTGGCACCGTGCCAA CCAGATGGCACGGACACAACA - 6 17 -1 0.001962 0.0568979 0.00875353 11 TTGGCACCGTGCCAA CGCCAAGGAGC + 6 18 2 0.00234372 0.067968 0.00970971 7 TTGGCACCGTGCCAA GGTGGGCAT + 6 23 2 0.00671913 0.194855 0.0243569 14 TTGGCACCGTGCCAA ATCCGGCACGTGGCCT - 6 26 -1 0.00772831 0.224121 0.0263672 9 TTGGCACCGTGCCAA GGGCAACCC - 6 27 0 0.00940455 0.272732 0.0303036 13 TTGGCACCGTGCCAA TTGACAGCTGTCA - 6 28 6 0.0182365 0.528859 0.0480781 13 TTGGCACCGTGCCAA GTTGCCATGGCAACCGCGG + 6 20 -1 0.0198267 0.574974 0.0493932 8 TTGGCACCGTGCCAA TAGCAACC - 6 14 1 0.0212902 0.617415 0.0493932 5 TTGGCACCGTGCCAA CTTGGC + 6 22 0 0.0455056 1.31966 0.0977527 14 TTGGCACCGTGCCAA ATGCCACGTCATCA - 7 7 0 0 0 0 22 TCTCTCCCTCCTTCTCTCCCTC TCTCTCCCTCCTTCTCTCCCTC + 7 10 4 1.7662e-06 5.12198e-05 5.12198e-05 22 TCTCTCCCTCCTTCTCTCCCTC TTTCCTTCCCTTTCCCTTCCTTTCTCT - 8 8 0 0 0 0 41 TGGTGGTGATGATGGTGGTGATGGTGGTGATGGTGATGATG TGGTGGTGATGATGGTGGTGATGGTGGTGATGGTGATGATG + 9 9 0 9.32094e-14 2.70307e-12 5.40615e-12 7 GTGCCAA GTGCCAA + 9 1 9 6.42716e-07 1.86388e-05 1.86388e-05 7 GTGCCAA CTTGGCACCGTGCCAA - 9 5 8 0.00016608 0.00481633 0.00216473 7 GTGCCAA TTGGCACGGTGCCAA + 9 4 8 0.000186615 0.00541183 0.00216473 7 GTGCCAA TTGGCACAGTGCCAG + 9 6 8 0.00144084 0.0417845 0.00935116 7 GTGCCAA TTGGCACGGTGCCAA - 9 12 -1 0.00161227 0.0467558 0.00935116 6 GTGCCAA TGCCAA + 9 14 -2 0.00161227 0.0467558 0.00935116 5 GTGCCAA GCCAAG - 9 18 0 0.0036987 0.107262 0.017877 7 GTGCCAA ATGCCCACC - 9 22 0 0.0118731 0.34432 0.0491886 7 GTGCCAA ATGCCACGTCATCA - 9 26 3 0.0194091 0.562863 0.0724266 6 GTGCCAA GGGTTGCCC + 9 27 6 0.0209942 0.608833 0.0724266 7 GTGCCAA TGACAGCTGTCAA + 9 24 2 0.0224772 0.651839 0.0724266 6 GTGCCAA TGGTACCA + 10 10 0 0 0 0 27 AGAGAAAGGAAGGGAAAGGGAAGGAAA AGAGAAAGGAAGGGAAAGGGAAGGAAA + 10 7 -3 3.21506e-06 9.32367e-05 9.32367e-05 22 AGAGAAAGGAAGGGAAAGGGAAGGAAA GAGGGAGAGAAGGAGGGAGAGA - 11 11 0 0 0 0 29 GAGGTTATCTACTGGGACATCTAGAGCCT GAGGTTATCTACTGGGACATCTAGAGCCT + 12 12 0 7.85966e-17 2.2793e-15 4.5586e-15 6 TGCCAA TGCCAA + 12 6 9 2.1076e-08 6.11203e-07 6.11203e-07 6 TGCCAA TTGGCACCGTGCCAA + 12 5 9 1.45365e-05 0.000421558 0.000210779 6 TGCCAA TTGGCACGGTGCCAA + 12 4 9 3.85676e-05 0.00111846 0.00037282 6 TGCCAA TTGGCACAGTGCCAG + 12 1 9 0.0026715 0.0774734 0.0193683 6 TGCCAA TTGGCACGGTGCCAAG + 12 18 1 0.00524891 0.152218 0.0304437 6 TGCCAA ATGCCCACC - 12 17 0 0.00740976 0.214883 0.0376478 6 TGCCAA CGCCAAGGAGC + 12 9 1 0.0077892 0.225887 0.0376478 6 TGCCAA GTGCCAA + 12 22 1 0.00881297 0.255576 0.0393194 6 TGCCAA ATGCCACGTCATCA - 12 14 -1 0.0146297 0.424262 0.0606088 5 TGCCAA GCCAAG - 12 28 7 0.0160063 0.464183 0.0618911 6 TGCCAA CCGCGGTTGCCATGGCAAC - 13 13 0 5.60519e-45 1.62551e-43 3.25101e-43 22 CACCCAGGCTGGAGTGCAGTGG CACCCAGGCTGGAGTGCAGTGG + 14 14 0 8.91082e-11 2.58414e-09 5.16828e-09 6 CTTGGC CTTGGC + 14 1 0 8.57991e-05 0.00248817 0.00248817 6 CTTGGC CTTGGCACCGTGCCAA - 14 9 -1 0.000366512 0.0106288 0.00708589 5 CTTGGC TTGGCAC - 14 4 -1 0.00261677 0.0758865 0.0252955 5 CTTGGC TTGGCACAGTGCCAG + 14 5 -1 0.00261677 0.0758865 0.0252955 5 CTTGGC TTGGCACGGTGCCAA + 14 12 -1 0.00350237 0.101569 0.0290197 5 CTTGGC TTGGCA - 14 6 -1 0.0119535 0.346653 0.0828798 5 CTTGGC TTGGCACCGTGCCAA + 14 25 1 0.01431 0.414991 0.0829981 6 CTTGGC GTTTGGCGCG - 15 15 0 0 0 0 31 CCCGGGTTCAAGCGATTCTCCTGCCTCAGCC CCCGGGTTCAAGCGATTCTCCTGCCTCAGCC + 16 16 0 0 0 0 22 AAGGTTTGCTGAGGGCAATCAC AAGGTTTGCTGAGGGCAATCAC + 17 17 0 3.2809e-33 9.51461e-32 1.90292e-31 11 CGCCAAGGAGC CGCCAAGGAGC + 17 23 0 0.000255158 0.00739957 0.00739957 11 CGCCAAGGAGC AGGCCACGTGCCGGAT + 17 6 1 0.00098354 0.0285227 0.0190151 11 CGCCAAGGAGC TTGGCACCGTGCCAA + 17 12 0 0.00186831 0.0541809 0.0270905 6 CGCCAAGGAGC TGCCAA + 17 28 7 0.003354 0.0972659 0.0389063 11 CGCCAAGGAGC GTTGCCATGGCAACCGCGG + 17 19 1 0.00601917 0.174556 0.0488911 11 CGCCAAGGAGC CCGCCACGAGCCC - 17 4 1 0.0067436 0.195564 0.0488911 11 CGCCAAGGAGC CTGGCACTGTGCCAA - 17 5 1 0.00927592 0.269002 0.0489094 11 CGCCAAGGAGC TTGGCACGGTGCCAA + 17 29 5 0.0109365 0.317157 0.0522605 11 CGCCAAGGAGC CCAGATGGCACGGACACAACA - 18 18 0 1.79912e-26 5.21745e-25 1.04349e-24 9 GGTGGGCAT GGTGGGCAT + 18 26 -3 0.00103482 0.0300098 0.0300098 6 GGTGGGCAT GGGCAACCC - 18 12 -2 0.00272792 0.0791097 0.0424963 6 GGTGGGCAT TTGGCA - 18 6 -2 0.00293078 0.0849925 0.0424963 7 GGTGGGCAT TTGGCACCGTGCCAA + 18 4 -2 0.00543559 0.157632 0.0572102 7 GGTGGGCAT CTGGCACTGTGCCAA - 18 5 -2 0.00591829 0.171631 0.0572102 7 GGTGGGCAT TTGGCACCGTGCCAA - 18 9 -2 0.0122514 0.355291 0.0858396 7 GGTGGGCAT TTGGCAC - 18 23 0 0.0159767 0.463326 0.0884081 9 GGTGGGCAT ATCCGGCACGTGGCCT - 19 19 0 7.89769e-38 2.29033e-36 4.58066e-36 13 GGGCTCGTGGCGG GGGCTCGTGGCGG + 19 23 3 0.000185076 0.00536721 0.00536721 13 GGGCTCGTGGCGG ATCCGGCACGTGGCCT - 19 22 1 0.00404942 0.117433 0.0469733 13 GGGCTCGTGGCGG TGATGACGTGGCAT + 19 17 -1 0.00607368 0.176137 0.0587122 11 GGGCTCGTGGCGG GCTCCTTGGCG - 20 20 0 3.12173e-19 9.053e-18 1.8106e-17 8 GGTTGCTA GGTTGCTA + 20 28 4 9.17926e-07 2.66199e-05 2.66199e-05 8 GGTTGCTA CCGCGGTTGCCATGGCAAC - 20 26 1 0.00159031 0.046119 0.030746 8 GGTTGCTA GGGTTGCCC + 21 21 0 8.40779e-45 2.43826e-43 4.87652e-43 15 GCAGCCAAGCGTGAC GCAGCCAAGCGTGAC + 22 22 0 1.1103e-37 3.21988e-36 6.43976e-36 14 TGATGACGTGGCAT TGATGACGTGGCAT + 22 19 -1 0.00187462 0.0543639 0.0543639 13 TGATGACGTGGCAT GGGCTCGTGGCGG + 22 28 4 0.00431351 0.125092 0.0741522 14 TGATGACGTGGCAT CCGCGGTTGCCATGGCAAC - 23 23 0 0 0 0 16 AGGCCACGTGCCGGAT AGGCCACGTGCCGGAT + 23 19 0 4.58426e-05 0.00132943 0.00132943 13 AGGCCACGTGCCGGAT CCGCCACGAGCCC - 23 17 0 0.000553835 0.0160612 0.00803061 11 AGGCCACGTGCCGGAT CGCCAAGGAGC + 23 29 3 0.00116405 0.0337576 0.013503 16 AGGCCACGTGCCGGAT TGTTGTGTCCGTGCCATCTGG + 23 6 1 0.00592833 0.171922 0.0429804 14 AGGCCACGTGCCGGAT TTGGCACGGTGCCAA - 23 18 -7 0.00937893 0.271989 0.0543978 9 AGGCCACGTGCCGGAT ATGCCCACC - 23 12 -8 0.0111177 0.322414 0.0586207 6 AGGCCACGTGCCGGAT TGCCAA + 23 27 -1 0.0126476 0.366779 0.0611299 13 AGGCCACGTGCCGGAT TGACAGCTGTCAA + 23 4 1 0.0164406 0.476778 0.0733504 14 AGGCCACGTGCCGGAT TTGGCACAGTGCCAG + 23 22 0 0.0191236 0.554585 0.0739447 14 AGGCCACGTGCCGGAT TGATGACGTGGCAT + 23 5 1 0.0212491 0.616223 0.0770279 14 AGGCCACGTGCCGGAT TTGGCACGGTGCCAA + 24 24 0 4.58656e-19 1.3301e-17 1.3301e-17 8 TGGTACCA TGGTACCA + 25 25 0 5.12354e-24 1.48583e-22 2.97165e-22 10 CGCGCCAAAC CGCGCCAAAC + 26 26 0 7.91613e-24 2.29568e-22 4.59135e-22 9 GGGTTGCCC GGGTTGCCC + 26 20 -1 0.00149546 0.0433683 0.0404696 8 GGGTTGCCC GGTTGCTA + 26 28 3 0.00209326 0.0607044 0.0404696 9 GGGTTGCCC CCGCGGTTGCCATGGCAAC - 26 6 5 0.00530622 0.15388 0.0627694 9 GGGTTGCCC TTGGCACGGTGCCAA - 26 18 -3 0.00541116 0.156924 0.0627694 6 GGGTTGCCC ATGCCCACC - 27 27 0 7.81871e-34 2.26743e-32 4.53485e-32 13 TGACAGCTGTCAA TGACAGCTGTCAA + 27 6 2 0.00529704 0.153614 0.0679256 13 TGACAGCTGTCAA TTGGCACGGTGCCAA - 27 19 0 0.00561382 0.162801 0.0679256 13 TGACAGCTGTCAA GGGCTCGTGGCGG + 27 23 1 0.00585565 0.169814 0.0679256 13 TGACAGCTGTCAA AGGCCACGTGCCGGAT + 27 22 1 0.0124729 0.361713 0.0830254 13 TGACAGCTGTCAA TGATGACGTGGCAT + 27 29 11 0.0128384 0.372313 0.0830254 10 TGACAGCTGTCAA TGTTGTGTCCGTGCCATCTGG + 27 4 2 0.0141057 0.409066 0.0830254 13 TGACAGCTGTCAA TTGGCACAGTGCCAG + 27 5 2 0.0149054 0.432257 0.0830254 13 TGACAGCTGTCAA TTGGCACGGTGCCAA + 27 12 -7 0.0193191 0.560255 0.086193 6 TGACAGCTGTCAA TGCCAA + 28 28 0 0 0 0 19 GTTGCCATGGCAACCGCGG GTTGCCATGGCAACCGCGG + 28 20 -7 2.55689e-07 7.41498e-06 7.41498e-06 8 GTTGCCATGGCAACCGCGG TAGCAACC - 28 26 -7 0.00159979 0.0463938 0.0231969 9 GTTGCCATGGCAACCGCGG GGGCAACCC - 28 22 -1 0.00301338 0.0873881 0.034078 14 GTTGCCATGGCAACCGCGG ATGCCACGTCATCA - 28 29 4 0.00411286 0.119273 0.034078 17 GTTGCCATGGCAACCGCGG TGTTGTGTCCGTGCCATCTGG + 28 17 -7 0.0112951 0.327558 0.0818895 11 GTTGCCATGGCAACCGCGG CGCCAAGGAGC + 28 12 -6 0.0158824 0.460589 0.0960973 6 GTTGCCATGGCAACCGCGG TTGGCA - 29 29 0 0 0 0 21 TGTTGTGTCCGTGCCATCTGG TGTTGTGTCCGTGCCATCTGG + 29 27 -11 0.000395065 0.0114569 0.00763793 10 TGTTGTGTCCGTGCCATCTGG TGACAGCTGTCAA + 29 28 -4 0.00273325 0.0792643 0.0329795 17 TGTTGTGTCCGTGCCATCTGG GTTGCCATGGCAACCGCGG + 29 23 -3 0.00284306 0.0824487 0.0329795 16 TGTTGTGTCCGTGCCATCTGG AGGCCACGTGCCGGAT + 29 6 -2 0.00375155 0.108795 0.036265 15 TGTTGTGTCCGTGCCATCTGG TTGGCACGGTGCCAA - 29 19 -11 0.00694376 0.201369 0.0461828 10 TGTTGTGTCCGTGCCATCTGG GGGCTCGTGGCGG +