Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
ATAAATAA | 8 | ATAAATAA |
GARAC | 5 | GAGAC |
CTTCAYCC | 8 | CTTCACCC |
ACASAG | 6 | ACAGAG |
CATCTYA | 7 | CATCTCA |
ATTRGGG | 7 | ATTGGGG |
CAARACY | 7 | CAAGACT |
AGCTGGR | 7 | AGCTGGA |
CAGCAYAC | 8 | CAGCATAC |
CCTGGGC | 7 | CCTGGGC |
GGYACA | 6 | GGTACA |
AGCYTC | 6 | AGCTTC |
GATAAAGA | 8 | GATAAAGA |
TAGYACA | 7 | TAGTACA |
AATTTCCT | 8 | AATTTCCT |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.296 C 0.204 G 0.204 T 0.296
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
CTTCAYCC | DREME-3 | chr20 | + | 646706 | 646713 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr12 | + | 2405209 | 2405216 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr19 | + | 4748680 | 4748687 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr6 | - | 7836568 | 7836575 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr1 | - | 14539503 | 14539510 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr6 | - | 14746351 | 14746358 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr1 | + | 15142415 | 15142422 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr1 | + | 17227657 | 17227664 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr6 | - | 20247220 | 20247227 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr20 | + | 20901721 | 20901728 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr14 | + | 21032900 | 21032907 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr6 | + | 21986061 | 21986068 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr8 | - | 22112396 | 22112403 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr1 | + | 24251650 | 24251657 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr3 | + | 24715582 | 24715589 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr2 | + | 25075004 | 25075011 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr15 | + | 25839798 | 25839805 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr14 | - | 26603103 | 26603110 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr8 | - | 26617207 | 26617214 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr22 | - | 26703515 | 26703522 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr22 | + | 27153062 | 27153069 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr22 | - | 27535671 | 27535678 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr16 | - | 27658013 | 27658020 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr13 | + | 27835971 | 27835978 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr22 | + | 29390466 | 29390473 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr7 | - | 30874898 | 30874905 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr19 | - | 31333157 | 31333164 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr6 | + | 32158230 | 32158237 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr6 | + | 32428112 | 32428119 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr6 | - | 33767148 | 33767155 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr20 | - | 34669299 | 34669306 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr21 | - | 35150781 | 35150788 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr20 | + | 38458486 | 38458493 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr4 | + | 40347652 | 40347659 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr19 | - | 46887446 | 46887453 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chrX | - | 47163387 | 47163394 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr17 | - | 47251074 | 47251081 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr19 | + | 47321752 | 47321759 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr20 | - | 48258032 | 48258039 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr17 | + | 48348519 | 48348526 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr18 | - | 55220032 | 55220039 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr20 | + | 57291863 | 57291870 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr6 | + | 57480357 | 57480364 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr12 | + | 57866476 | 57866483 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr17 | + | 58832684 | 58832691 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr15 | + | 65060372 | 65060379 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr3 | - | 66141191 | 66141198 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr16 | - | 66417516 | 66417523 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr15 | - | 68491635 | 68491642 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr17 | + | 70996200 | 70996207 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr10 | - | 71058538 | 71058545 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr10 | + | 71455225 | 71455232 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr15 | - | 72189476 | 72189483 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr5 | + | 76165212 | 76165219 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr18 | + | 76549526 | 76549533 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr2 | + | 86707114 | 86707121 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr15 | + | 90182818 | 90182825 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr14 | - | 92608273 | 92608280 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr11 | + | 94772101 | 94772108 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr8 | - | 97810469 | 97810476 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr2 | + | 99259643 | 99259650 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr1 | - | 99992539 | 99992546 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr8 | - | 100535300 | 100535307 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr6 | - | 100599596 | 100599603 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr12 | - | 106333224 | 106333231 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chrX | + | 110060496 | 110060503 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr12 | + | 110869976 | 110869983 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr10 | + | 112875161 | 112875168 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr13 | + | 113894978 | 113894985 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr9 | - | 114506222 | 114506229 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr10 | - | 116801874 | 116801881 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr11 | + | 119412206 | 119412213 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr2 | - | 121627212 | 121627219 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr12 | + | 122168649 | 122168656 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr12 | + | 124515420 | 124515427 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr3 | + | 126973983 | 126973990 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr3 | - | 130740080 | 130740087 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr7 | - | 140424560 | 140424567 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr5 | + | 142411284 | 142411291 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr6 | + | 150173095 | 150173102 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr5 | + | 169760391 | 169760398 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr5 | - | 173191238 | 173191245 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr1 | + | 183150633 | 183150640 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr1 | - | 213181034 | 213181041 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr1 | + | 226037939 | 226037946 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr2 | - | 232597595 | 232597602 | 9.1e-06 | 0.0613 | CTTCACCC |
CTTCAYCC | DREME-3 | chr2 | + | 234293017 | 234293024 | 9.1e-06 | 0.0613 | cttcaccc |
CTTCAYCC | DREME-3 | chr6 | + | 817364 | 817371 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr19 | + | 2577316 | 2577323 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr10 | - | 6455798 | 6455805 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr10 | - | 6457580 | 6457587 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr2 | - | 9024835 | 9024842 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr1 | + | 10087370 | 10087377 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr3 | + | 10360657 | 10360664 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr16 | - | 15229833 | 15229840 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr2 | - | 19645002 | 19645009 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr21 | + | 25864730 | 25864737 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr8 | + | 26722478 | 26722485 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr8 | - | 29992719 | 29992726 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr10 | - | 34273652 | 34273659 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr6 | - | 36169823 | 36169830 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr17 | - | 36794186 | 36794193 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr7 | - | 37231820 | 37231827 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr17 | + | 41591402 | 41591409 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr19 | + | 43947520 | 43947527 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr19 | - | 50447287 | 50447294 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr10 | - | 52007420 | 52007427 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr4 | - | 54043863 | 54043870 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr16 | - | 55254199 | 55254206 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr20 | + | 57185313 | 57185320 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr17 | + | 57515978 | 57515985 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr3 | - | 58315635 | 58315642 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr18 | + | 58924640 | 58924647 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr17 | + | 59538699 | 59538706 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr5 | - | 60718927 | 60718934 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr2 | - | 62402370 | 62402377 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr17 | + | 66936146 | 66936153 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr3 | - | 67609934 | 67609941 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr2 | + | 69605504 | 69605511 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr17 | - | 73040595 | 73040602 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr15 | - | 79111630 | 79111637 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr13 | + | 79989567 | 79989574 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr1 | + | 82079782 | 82079789 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr2 | + | 88499365 | 88499372 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr9 | - | 92774001 | 92774008 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr15 | - | 100980622 | 100980629 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr6 | - | 104754997 | 104755004 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr5 | - | 115311377 | 115311384 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr1 | - | 117844765 | 117844772 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr1 | - | 118791282 | 118791289 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr10 | - | 122967151 | 122967158 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr3 | + | 124147599 | 124147606 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr6 | + | 125514157 | 125514164 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr12 | + | 131061598 | 131061605 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr9 | + | 132144867 | 132144874 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr4 | + | 150931184 | 150931191 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr5 | + | 168676047 | 168676054 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr5 | + | 168676204 | 168676211 | 2.24e-05 | 0.0904 | Cttcatcc |
CTTCAYCC | DREME-3 | chr2 | - | 173961598 | 173961605 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr5 | - | 178264057 | 178264064 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr5 | - | 178264268 | 178264275 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr3 | - | 184012164 | 184012171 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr1 | - | 204667308 | 204667315 | 2.24e-05 | 0.0904 | CTTCATCC |
CTTCAYCC | DREME-3 | chr1 | + | 207994224 | 207994231 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr2 | + | 224421229 | 224421236 | 2.24e-05 | 0.0904 | cttcatcc |
CTTCAYCC | DREME-3 | chr10 | - | 11907330 | 11907337 | 4.47e-05 | 0.147 | CTTCAACC |
CTTCAYCC | DREME-3 | chr6 | - | 12481527 | 12481534 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr1 | - | 17227427 | 17227434 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr17 | + | 31936487 | 31936494 | 4.47e-05 | 0.147 | cttcaacc |
CTTCAYCC | DREME-3 | chr19 | - | 33122968 | 33122975 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr19 | - | 35289711 | 35289718 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr19 | + | 35882118 | 35882125 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr21 | - | 36123118 | 36123125 | 4.47e-05 | 0.147 | CTTCAACC |
CTTCAYCC | DREME-3 | chr6 | + | 38045200 | 38045207 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr19 | + | 39794542 | 39794549 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr19 | - | 40103711 | 40103718 | 4.47e-05 | 0.147 | CTTCAACC |
CTTCAYCC | DREME-3 | chrX | - | 41282357 | 41282364 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr5 | + | 43014486 | 43014493 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr13 | + | 45064168 | 45064175 | 4.47e-05 | 0.147 | cttcaacc |
CTTCAYCC | DREME-3 | chr17 | - | 48017043 | 48017050 | 4.47e-05 | 0.147 | CTTCAACC |
CTTCAYCC | DREME-3 | chr12 | - | 56219913 | 56219920 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr6 | - | 57480188 | 57480195 | 4.47e-05 | 0.147 | CTTCAACC |
CTTCAYCC | DREME-3 | chr1 | + | 57659942 | 57659949 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr2 | - | 62402178 | 62402185 | 4.47e-05 | 0.147 | CTTCAACC |
CTTCAYCC | DREME-3 | chr16 | + | 69408248 | 69408255 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr14 | - | 73694424 | 73694431 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr15 | + | 79111520 | 79111527 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr15 | + | 90182738 | 90182745 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr6 | - | 90454125 | 90454132 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chrX | + | 117908132 | 117908139 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chrX | + | 123770627 | 123770634 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr7 | + | 140424270 | 140424277 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr5 | + | 154259180 | 154259187 | 4.47e-05 | 0.147 | cttcaacc |
CTTCAYCC | DREME-3 | chr1 | + | 155225424 | 155225431 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr5 | - | 160008778 | 160008785 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr5 | + | 160243441 | 160243448 | 4.47e-05 | 0.147 | cttcagcc |
CTTCAYCC | DREME-3 | chr1 | - | 236315164 | 236315171 | 4.47e-05 | 0.147 | CTTCAGCC |
CTTCAYCC | DREME-3 | chr1 | - | 236476088 | 236476095 | 4.47e-05 | 0.147 | CTTCAGCC |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_13 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif CTTCAYCC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_13 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF529.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.