Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 GCCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GGTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCCAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACACTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 GTGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCAGC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGCCCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTC
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CGTAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAGA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAGTCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.229 C 0.271 G 0.271 T 0.229


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6329_1.02 LHX3 chr22 + 38768719 38768731 2.03e-08 0.00583 ataattaattaat
M6329_1.02 LHX3 chr5 + 138866190 138866202 2.03e-08 0.00583 ATAATTAATTAAT
M6329_1.02 LHX3 chr10 - 72580465 72580477 3.41e-08 0.00656 TAAATTAATTAAT
M6329_1.02 LHX3 chr10 + 72580462 72580474 1.56e-07 0.018 ttaattaattaat
M6329_1.02 LHX3 chr5 - 138866193 138866205 1.56e-07 0.018 TTAATTAATTAAT
M6329_1.02 LHX3 chr14 - 102639474 102639486 2.71e-07 0.0261 TAAATTAATTAGC
M6329_1.02 LHX3 chr10 - 72580461 72580473 5.82e-07 0.0388 TTAATTAATTAAA
M6329_1.02 LHX3 chr5 + 138866194 138866206 5.82e-07 0.0388 TTAATTAATTAAA
M6329_1.02 LHX3 chr10 + 72580458 72580470 6.06e-07 0.0388 ttatttaattaat
M6329_1.02 LHX3 chr22 - 38768718 38768730 1.05e-06 0.0549 TTAATTAATTATT
M6329_1.02 LHX3 chr5 - 138866189 138866201 1.05e-06 0.0549 TTAATTAATTATT
M6329_1.02 LHX3 chr14 - 102639478 102639490 2.42e-06 0.116 AAAATAAATTAAT
M6329_1.02 LHX3 chr17 + 38667464 38667476 2.71e-06 0.12 caagttaattaac
M6329_1.02 LHX3 chr16 - 2868141 2868153 3.49e-06 0.125 GGAGTTAATTAAC
M6329_1.02 LHX3 chr22 + 38768715 38768727 3.58e-06 0.125 ataaataattaat
M6329_1.02 LHX3 chr19 - 43709355 43709367 3.77e-06 0.125 AAAAGTAATTAAG
M6329_1.02 LHX3 chr19 - 43709805 43709817 3.77e-06 0.125 AAAAGTAATTAAG
M6329_1.02 LHX3 chr1 + 114581642 114581654 3.91e-06 0.125 ATATTTAATTACG
M6329_1.02 LHX3 chr19 - 35323523 35323535 4.73e-06 0.131 AAAATTAAATAAC
M6329_1.02 LHX3 chr1 + 154016099 154016111 5.07e-06 0.131 aaaaataattagc
M6329_1.02 LHX3 chr10 + 72580466 72580478 5.33e-06 0.131 ttaattaatttat
M6329_1.02 LHX3 chr10 - 72580469 72580481 6.49e-06 0.131 TAAATAAATTAAT
M6329_1.02 LHX3 chr19 - 33821456 33821468 7.12e-06 0.131 TAAAATAATTAGT
M6329_1.02 LHX3 chr22 + 38768723 38768735 7.12e-06 0.131 ttaattaataaat
M6329_1.02 LHX3 chr19 + 35462038 35462050 7.79e-06 0.131 aaaataaattagc
M6329_1.02 LHX3 chr5 - 138866197 138866209 8.02e-06 0.131 ATTTTTAATTAAT
M6329_1.02 LHX3 chr5 - 150450108 150450120 8.28e-06 0.131 AGCTTTAATTAAG
M6329_1.02 LHX3 chr22 - 38768722 38768734 8.55e-06 0.131 TTTATTAATTAAT
M6329_1.02 LHX3 chrX + 24144060 24144072 8.61e-06 0.131 taaatgaattaac
M6329_1.02 LHX3 chr6 + 33378182 33378194 8.67e-06 0.131 ataaataattaaa
M6329_1.02 LHX3 chr15 - 101946065 101946077 9.75e-06 0.131 AAAATAAATTATT
M6329_1.02 LHX3 chr12 - 123313246 123313258 9.75e-06 0.131 AAAATTATTTATT
M6329_1.02 LHX3 chr12 - 123313300 123313312 9.75e-06 0.131 AAAATTATTTATT
M6329_1.02 LHX3 chr15 + 88546898 88546910 9.93e-06 0.131 AGAATTAATTTTT
M6329_1.02 LHX3 chr17 - 38667467 38667479 1.02e-05 0.131 GAGGTTAATTAAC
M6329_1.02 LHX3 chr19 - 33821654 33821666 1.21e-05 0.131 AAAATTAACTAGG
M6329_1.02 LHX3 chr10 - 35197391 35197403 1.27e-05 0.131 AAAATTTATTACT
M6329_1.02 LHX3 chr6 - 28443686 28443698 1.35e-05 0.131 GTAATGAATTAAT
M6329_1.02 LHX3 chr20 - 37289419 37289431 1.36e-05 0.131 TTGTTTAATTAAA
M6329_1.02 LHX3 chr1 - 230796378 230796390 1.37e-05 0.131 TAATTTAATTTAA
M6329_1.02 LHX3 chr10 - 35406123 35406135 1.42e-05 0.131 GGACTTAATTAAC
M6329_1.02 LHX3 chr1 + 230796375 230796387 1.44e-05 0.131 aaATTAAATTAAA
M6329_1.02 LHX3 chr1 + 230796380 230796392 1.44e-05 0.131 AAATTAAATTAAA
M6329_1.02 LHX3 chr2 - 32277584 32277596 1.44e-05 0.131 GCCATTAATTAAT
M6329_1.02 LHX3 chr14 + 102639475 102639487 1.48e-05 0.131 ctaattaatttat
M6329_1.02 LHX3 chr2 + 32277581 32277593 1.48e-05 0.131 actattaattaat
M6329_1.02 LHX3 chr5 + 138866186 138866198 1.5e-05 0.131 GGAAATAATTAAT
M6329_1.02 LHX3 chr15 - 101946061 101946073 1.52e-05 0.131 TAAATTATTTAAA
M6329_1.02 LHX3 chr10 + 35406120 35406132 1.59e-05 0.131 gaggttaattaag
M6329_1.02 LHX3 chr5 - 116085641 116085653 1.97e-05 0.131 GAAATTAACTAAA
M6329_1.02 LHX3 chr1 - 52847831 52847843 1.98e-05 0.131 TAAATAAATTAGC
M6329_1.02 LHX3 chr1 + 16493291 16493303 1.98e-05 0.131 taaataaattagc
M6329_1.02 LHX3 chr1 - 35380214 35380226 2.05e-05 0.131 ATAGTTAATAAAC
M6329_1.02 LHX3 chr15 - 88546897 88546909 2.18e-05 0.131 AAAATTAATTCTA
M6329_1.02 LHX3 chr16 + 2868138 2868150 2.26e-05 0.131 GTGGTTAATTAAC
M6329_1.02 LHX3 chr10 + 72580253 72580265 2.29e-05 0.131 TGATGTAATTAAT
M6329_1.02 LHX3 chr3 + 39383120 39383132 2.5e-05 0.131 aaaattaatgtat
M6329_1.02 LHX3 chr3 - 57556173 57556185 2.76e-05 0.131 AAGATTAATTTTT
M6329_1.02 LHX3 chr3 + 39383132 39383144 3.02e-05 0.131 tcaattaataaat
M6329_1.02 LHX3 chr4 - 141686403 141686415 3.15e-05 0.131 GAAATTTATTATT
M6329_1.02 LHX3 chr1 - 67699393 67699405 3.24e-05 0.131 AGAATTAATTGTA
M6329_1.02 LHX3 chr19 - 35385984 35385996 3.26e-05 0.131 AAGTTTAGTTAAT
M6329_1.02 LHX3 chr10 - 72580457 72580469 3.31e-05 0.131 TTAATTAAATAAA
M6329_1.02 LHX3 chr17 + 47544437 47544449 3.34e-05 0.131 ATATATAATTATT
M6329_1.02 LHX3 chr10 + 72580454 72580466 3.35e-05 0.131 ttatttatttaat
M6329_1.02 LHX3 chr12 + 42216146 42216158 3.44e-05 0.131 aaagttagttact
M6329_1.02 LHX3 chr13 + 33817805 33817817 3.47e-05 0.131 tgaatgaattaaG
M6329_1.02 LHX3 chr6 - 96811705 96811717 3.59e-05 0.131 AGTTTTAATTAGA
M6329_1.02 LHX3 chr5 + 32367435 32367447 3.61e-05 0.131 aaaaataataaat
M6329_1.02 LHX3 chr8 + 22010044 22010056 3.74e-05 0.131 GGAATTAATTTGG
M6329_1.02 LHX3 chr9 - 33474292 33474304 3.89e-05 0.131 AAAATGAATAAAT
M6329_1.02 LHX3 chr20 + 41059201 41059213 4.02e-05 0.131 aaacataattagt
M6329_1.02 LHX3 chr9 + 33474413 33474425 4.05e-05 0.131 TAATTTAGTTATT
M6329_1.02 LHX3 chr17 - 39688129 39688141 4.05e-05 0.131 AACTTTAATTTAA
M6329_1.02 LHX3 chr8 - 11511034 11511046 4.29e-05 0.131 ACAATTAACTAAC
M6329_1.02 LHX3 chr22 - 29553930 29553942 4.31e-05 0.131 AACATTAATTCAA
M6329_1.02 LHX3 chr19 + 45953337 45953349 4.65e-05 0.131 TACGTTAATTATG
M6329_1.02 LHX3 chr19 - 857070 857082 4.79e-05 0.131 ATATTTATTTATT
M6329_1.02 LHX3 chr16 - 12062410 12062422 4.79e-05 0.131 ATATTTATTTATT
M6329_1.02 LHX3 chr16 - 30052727 30052739 4.79e-05 0.131 ATATTTATTTATT
M6329_1.02 LHX3 chr21 + 32695632 32695644 4.79e-05 0.131 Atatttatttatt
M6329_1.02 LHX3 chr19 - 35461981 35461993 4.79e-05 0.131 ATATTTATTTATT
M6329_1.02 LHX3 chr1 + 36266849 36266861 4.79e-05 0.131 Atatttatttatt
M6329_1.02 LHX3 chr8 + 37892424 37892436 4.79e-05 0.131 atatttatttatt
M6329_1.02 LHX3 chr5 - 43014714 43014726 4.79e-05 0.131 ATATTTATTTATT
M6329_1.02 LHX3 chr21 + 43905154 43905166 4.79e-05 0.131 Atatttatttatt
M6329_1.02 LHX3 chr6 + 46834434 46834446 4.79e-05 0.131 atatttatttatt
M6329_1.02 LHX3 chr12 - 56220047 56220059 4.79e-05 0.131 ATATTTATTTATT
M6329_1.02 LHX3 chr15 + 71084445 71084457 4.79e-05 0.131 Atatttatttatt
M6329_1.02 LHX3 chr5 + 134850993 134851005 4.79e-05 0.131 atatttatttatt
M6329_1.02 LHX3 chr5 + 149963081 149963093 4.79e-05 0.131 Atatttatttatt
M6329_1.02 LHX3 chr1 - 230796373 230796385 4.79e-05 0.131 TAATTTAATTTTA
M6329_1.02 LHX3 chr15 + 101945949 101945961 4.82e-05 0.131 ggttttaattagt
M6329_1.02 LHX3 chr22 + 18021037 18021049 4.9e-05 0.131 GGAATTTATTAAA
M6329_1.02 LHX3 chr4 - 190112301 190112313 4.9e-05 0.131 AAATCTAATTACA
M6329_1.02 LHX3 chr6 - 33378181 33378193 5.08e-05 0.131 TTAATTATTTATT
M6329_1.02 LHX3 chr22 - 38768714 38768726 5.08e-05 0.131 TTAATTATTTATT
M6329_1.02 LHX3 chr16 + 46743 46755 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr19 + 857032 857044 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chrX + 1523077 1523089 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr20 - 2647151 2647163 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr17 - 8078150 8078162 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 - 11533261 11533273 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr16 + 12062376 12062388 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr1 - 14997244 14997256 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 + 16493251 16493263 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr19 + 16591047 16591059 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr19 - 17109071 17109083 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr17 - 19255471 19255483 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr16 + 21515175 21515187 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr16 + 21572543 21572555 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr16 - 21821009 21821021 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chrX + 23772042 23772054 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chrX - 24144202 24144214 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 - 24593891 24593903 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr6 + 27840741 27840753 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr16 + 30052697 30052709 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr6 + 30162930 30162942 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr16 - 30570756 30570768 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr12 - 32017436 32017448 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr5 + 32157977 32157989 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr5 + 32158090 32158102 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr6 + 32211593 32211605 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr5 + 32282419 32282431 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr1 + 32609336 32609348 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr21 - 32695666 32695678 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr6 + 32699909 32699921 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr19 - 32767131 32767143 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 + 33159334 33159346 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr6 + 33378139 33378151 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr9 - 33474461 33474473 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 - 33821500 33821512 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr10 - 35197455 35197467 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 - 35380304 35380316 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 - 35380329 35380341 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 - 35386160 35386172 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr10 - 35406232 35406244 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr17 + 35567516 35567528 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr17 + 35763896 35763908 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr19 + 35882171 35882183 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr21 + 36123190 36123202 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr1 - 36159061 36159073 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 - 36266883 36266895 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 + 37160342 37160354 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr8 - 37892458 37892470 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 + 37918870 37918882 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr1 - 37933938 37933950 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 - 38065851 38065863 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 - 38065936 38065948 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr19 - 38066017 38066029 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr17 + 38667239 38667251 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr19 + 38766467 38766479 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr22 + 38768684 38768696 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr19 + 40103776 40103788 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr17 + 40325251 40325263 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr19 + 40567297 40567309 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr20 + 41059408 41059420 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr22 - 41961191 41961203 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr12 + 42215926 42215938 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr22 - 42474082 42474094 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr5 + 43014687 43014699 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr5 + 43014704 43014716 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr6 + 43088689 43088701 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr21 - 43905196 43905208 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr20 + 45349385 45349397 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr2 + 47268832 47268844 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr2 + 47268847 47268859 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr17 - 47544539 47544551 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr12 - 48866617 48866629 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr18 - 48873769 48873781 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr18 - 49515216 49515228 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 - 52847871 52847883 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr12 + 53550330 53550342 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr12 + 56220017 56220029 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr17 - 58822365 58822377 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr3 + 61732708 61732720 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chrX + 63439752 63439764 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr1 + 64398497 64398509 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr11 - 67122678 67122690 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 + 67699184 67699196 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr10 - 69304309 69304321 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr7 - 69413102 69413114 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr15 - 70866151 70866163 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr15 - 71084487 71084499 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chrX + 72210201 72210213 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr10 - 72580481 72580493 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr6 + 73461533 73461545 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr15 - 75217784 75217796 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr15 + 78404989 78405001 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr10 - 86796518 86796530 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr15 - 89042621 89042633 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr15 - 90182630 90182642 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr6 + 96811836 96811848 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr13 - 98581022 98581034 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr15 - 101946110 101946122 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr6 + 108155491 108155503 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr12 + 109939681 109939693 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr12 - 110048674 110048686 5.21e-05 0.131 AACATTAGTTATT
M6329_1.02 LHX3 chr10 + 114649399 114649411 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr5 - 115311487 115311499 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr12 + 122513195 122513207 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr12 + 123313200 123313212 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr12 + 123313286 123313298 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr5 + 127023732 127023744 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr2 + 128228024 128228036 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr9 + 130342011 130342023 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr9 + 132357913 132357925 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr6 + 134662269 134662281 5.21e-05 0.131 Aaaataaataaat
M6329_1.02 LHX3 chr5 - 134851023 134851035 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr6 + 138525527 138525539 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr5 - 138866317 138866329 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr5 - 139490119 139490131 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr4 + 141686296 141686308 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr5 - 149963111 149963123 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chrX + 153937196 153937208 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chrX - 154303216 154303228 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 - 155575757 155575769 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr1 - 155575827 155575839 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr5 + 160008850 160008862 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr5 + 160243243 160243255 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr1 + 160300343 160300355 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr6 - 163553105 163553117 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr5 + 175656302 175656314 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr5 - 177345772 177345784 5.21e-05 0.131 AAAATAAATAAAT
M6329_1.02 LHX3 chr4 + 190112105 190112117 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr3 + 193970590 193970602 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr1 + 225654925 225654937 5.21e-05 0.131 aaaataaataaat
M6329_1.02 LHX3 chr1 + 50882440 50882452 5.24e-05 0.131 aaaattaaaaaat
M6329_1.02 LHX3 chr14 - 102639486 102639498 5.24e-05 0.131 AAAATTAAAAAAT
M6329_1.02 LHX3 chr19 + 33821453 33821465 5.26e-05 0.131 AAGACTAATTATt
M6329_1.02 LHX3 chr1 + 17227573 17227585 5.29e-05 0.131 taaataaatTACC
M6329_1.02 LHX3 chr15 + 90182482 90182494 5.3e-05 0.131 aacattacttaag
M6329_1.02 LHX3 chr5 + 116085708 116085720 5.3e-05 0.131 aacattatttaag
M6329_1.02 LHX3 chr1 - 16493289 16493301 5.39e-05 0.131 TAATTTATTTATT
M6329_1.02 LHX3 chr1 - 17227571 17227583 5.39e-05 0.131 TAATTTATTTATT
M6329_1.02 LHX3 chr1 + 52847833 52847845 5.39e-05 0.131 taatttatttatt
M6329_1.02 LHX3 chr10 + 72580471 72580483 5.39e-05 0.131 taatttatttatt
M6329_1.02 LHX3 chr14 + 90256284 90256296 5.43e-05 0.131 TAATTTAAATATT
M6329_1.02 LHX3 chr1 - 230796368 230796380 5.43e-05 0.131 TAATTTTATTATT
M6329_1.02 LHX3 chr5 + 34182330 34182342 5.51e-05 0.132 ttttttaattagc
M6329_1.02 LHX3 chr14 - 21384271 21384283 5.64e-05 0.135 AGAGTTAATAAGG
M6329_1.02 LHX3 chr3 - 61732750 61732762 5.69e-05 0.135 AGATTTATTTATT
M6329_1.02 LHX3 chr19 - 35462027 35462039 5.8e-05 0.137 TTATTTAATAATT
M6329_1.02 LHX3 chr12 - 6723854 6723866 5.81e-05 0.137 AAACTTTATTAGT
M6329_1.02 LHX3 chr11 - 94973772 94973784 6.01e-05 0.141 GACATTAAGTAAT
M6329_1.02 LHX3 chrX + 153937039 153937051 6.05e-05 0.142 aaaattaaagaat
M6329_1.02 LHX3 chr22 - 38768726 38768738 6.16e-05 0.144 AATATTTATTAAT
M6329_1.02 LHX3 chr5 - 175656371 175656383 6.29e-05 0.146 AAAATTATTTTGT
M6329_1.02 LHX3 chr1 - 230796463 230796475 6.31e-05 0.146 GCAAGTAATTAGT
M6329_1.02 LHX3 chr1 + 51879104 51879116 6.56e-05 0.151 AGAATTAATTCCA
M6329_1.02 LHX3 chr1 + 160300567 160300579 6.56e-05 0.151 agaattaattcca
M6329_1.02 LHX3 chr1 + 230796460 230796472 6.73e-05 0.154 AACACTAATTACT
M6329_1.02 LHX3 chr1 + 155225091 155225103 6.75e-05 0.154 aaaaataaataaT
M6329_1.02 LHX3 chr6 - 33378185 33378197 6.78e-05 0.154 TTTTTTAATTATT
M6329_1.02 LHX3 chr16 + 690608 690620 6.94e-05 0.157 ttatttatttaaa
M6329_1.02 LHX3 chr6 + 96811825 96811837 7e-05 0.157 TTATTTCATTAAa
M6329_1.02 LHX3 chr5 + 116085712 116085724 7e-05 0.157 ttatttaagtaaa
M6329_1.02 LHX3 chr1 - 160300566 160300578 7.14e-05 0.158 GGAATTAATTCTT
M6329_1.02 LHX3 chr12 + 53550361 53550373 7.18e-05 0.158 ataaataataaat
M6329_1.02 LHX3 chr12 - 32017388 32017400 7.18e-05 0.158 ATAAATAATAAAT
M6329_1.02 LHX3 chr21 - 35002421 35002433 7.18e-05 0.158 ATAAATAATAAAT
M6329_1.02 LHX3 chr22 - 42474047 42474059 7.18e-05 0.158 ATAAATAATAAAT
M6329_1.02 LHX3 chr17 + 57850256 57850268 7.21e-05 0.158 AGAAGTAATAAAT
M6329_1.02 LHX3 chr1 - 16366735 16366747 7.26e-05 0.158 ATCATTTATTAAC
M6329_1.02 LHX3 chr22 + 29553927 29553939 7.28e-05 0.158 tagttgaattaat
M6329_1.02 LHX3 chr5 + 139489884 139489896 7.47e-05 0.162 GGAATTAACTATT
M6329_1.02 LHX3 chr20 - 36236294 36236306 7.71e-05 0.166 AACTTTCATTAAC
M6329_1.02 LHX3 chr6 + 138525367 138525379 7.91e-05 0.17 aaaattaaaaagt
M6329_1.02 LHX3 chr1 + 155225276 155225288 7.94e-05 0.17 ACAAttatttatt
M6329_1.02 LHX3 chr16 - 46720 46732 8.12e-05 0.173 TTATTTATTTAAG
M6329_1.02 LHX3 chr1 - 50882598 50882610 8.12e-05 0.173 TTATTTATTTAAG
M6329_1.02 LHX3 chr1 + 230796374 230796386 8.44e-05 0.178 aaaATTAAATTAA
M6329_1.02 LHX3 chr6 - 90587307 90587319 8.44e-05 0.178 CACTTTAATTACG
M6329_1.02 LHX3 chr1 + 17227778 17227790 8.55e-05 0.178 AAAAGTACTTAGT
M6329_1.02 LHX3 chr9 - 97013803 97013815 8.55e-05 0.178 AAAAGAAATTAGT
M6329_1.02 LHX3 chr5 + 116085642 116085654 8.58e-05 0.178 ttagttaatttct
M6329_1.02 LHX3 chr16 - 85495484 85495496 8.58e-05 0.178 TAAATGAATAAAT
M6329_1.02 LHX3 chr5 - 115311443 115311455 8.58e-05 0.178 TAAATGAATAAAT
M6329_1.02 LHX3 chr6 + 33378392 33378404 8.61e-05 0.178 ACTTTTAATTAGC
M6329_1.02 LHX3 chr4 - 55853438 55853450 8.71e-05 0.179 AGAGTTATTTATT
M6329_1.02 LHX3 chr19 - 35385980 35385992 8.78e-05 0.179 TTAGTTAATAAGA
M6329_1.02 LHX3 chr17 - 47544473 47544485 8.78e-05 0.179 AATCTTAATTAGG
M6329_1.02 LHX3 chr13 + 33817826 33817838 9.03e-05 0.183 agaatgaataaat
M6329_1.02 LHX3 chr3 - 39383135 39383147 9.03e-05 0.183 TTGATTTATTAAT
M6329_1.02 LHX3 chr1 - 236604288 236604300 9.07e-05 0.183 TACTGTAATTAGT
M6329_1.02 LHX3 chr19 + 35323524 35323536 9.21e-05 0.185 ttatttaatttta
M6329_1.02 LHX3 chr1 + 225655149 225655161 9.44e-05 0.189 ATATCTAATTACA
M6329_1.02 LHX3 chr14 - 95534814 95534826 9.44e-05 0.189 TTAGTTAATTGGA
M6329_1.02 LHX3 chr8 + 11511035 11511047 9.47e-05 0.189 TTAGTTAATTGTT
M6329_1.02 LHX3 chr7 + 130205632 130205644 9.54e-05 0.189 AAAAGTAATAATT
M6329_1.02 LHX3 chr17 + 8093868 8093880 9.98e-05 0.192 aTaataaataaat
M6329_1.02 LHX3 chr16 + 31037669 31037681 9.98e-05 0.192 ataataaataaat
M6329_1.02 LHX3 chr5 + 32367439 32367451 9.98e-05 0.192 ataataaataaat
M6329_1.02 LHX3 chr19 + 38766680 38766692 9.98e-05 0.192 ataataaataaat
M6329_1.02 LHX3 chr9 + 135985313 135985325 9.98e-05 0.192 aTaataaataaat
M6329_1.02 LHX3 chr12 - 32017384 32017396 9.98e-05 0.192 ATAATAAATAAAT
M6329_1.02 LHX3 chr21 - 35002417 35002429 9.98e-05 0.192 ATAATAAATAAAT
M6329_1.02 LHX3 chr22 - 42474043 42474055 9.98e-05 0.192 ATAATAAATAAAT
M6329_1.02 LHX3 chr6 - 46834221 46834233 9.98e-05 0.192 AAAAAAAATTAGT
M6329_1.02 LHX3 chr5 - 55463944 55463956 9.98e-05 0.192 AAAAAAAATTAGT

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_13 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6329_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_13 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF518A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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