******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF501.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr10:116657070-11665757 1.0000 100 chr6:32969447-32969947 1.0000 100 chr5:78762706-78763206 1.0000 100 chr6:28635117-28635617 1.0000 100 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chr19:28400922-28401422 1.0000 100 chr1:67698960-67699460 1.0000 100 chr6:170306683-170307183 1.0000 100 chr18:49439792-49440292 1.0000 100 chr10:74827135-74827635 1.0000 100 chr6:31271721-31272221 1.0000 100 chr17:35809283-35809783 1.0000 100 chr19:40103557-40104057 1.0000 100 chr19:38850791-38851291 1.0000 100 chr9:133336027-133336527 1.0000 100 chr6:28673728-28674228 1.0000 100 chr5:32282198-32282698 1.0000 100 chr1:36158803-36159303 1.0000 100 chr10:86796249-86796749 1.0000 100 chr1:26620531-26621031 1.0000 100 chr2:168890076-168890576 1.0000 100 chr5:69369340-69369840 1.0000 100 chr19:39996623-39997123 1.0000 100 chr17:38825322-38825822 1.0000 100 chr6:28587049-28587549 1.0000 100 chr16:46492-46992 1.0000 100 chr6:30556243-30556743 1.0000 100 chr5:71587123-71587623 1.0000 100 chr17:996905-997405 1.0000 100 chr6:30557066-30557566 1.0000 100 chr1:27181866-27182366 1.0000 100 chr6:28795848-28796348 1.0000 100 chr6:31827671-31828171 1.0000 100 chr17:77233775-77234275 1.0000 100 chr5:32157863-32158363 1.0000 100 chr10:35197186-35197686 1.0000 100 chr12:48866317-48866817 1.0000 100 chr6:28589162-28589662 1.0000 100 chr19:39996956-39997456 1.0000 100 chr12:104635-105135 1.0000 100 chrX:63439525-63440025 1.0000 100 chr10:72580222-72580722 1.0000 100 chr6:33391693-33392193 1.0000 100 chr6:30345071-30345571 1.0000 100 chr5:43014458-43014958 1.0000 100 chr17:46101160-46101660 1.0000 100 chr19:36418207-36418707 1.0000 100 chr17:45584157-45584657 1.0000 100 chr19:40602072-40602572 1.0000 100 chr1:155261969-155262469 1.0000 100 chr19:34254117-34254617 1.0000 100 chr5:69492370-69492870 1.0000 100 chr7:148339267-148339767 1.0000 100 chr6:31971796-31972296 1.0000 100 chr12:11171202-11171702 1.0000 100 chr6:30647266-30647766 1.0000 100 chr17:36545475-36545975 1.0000 100 chr15:101945846-10194634 1.0000 100 chr1:144551745-144552245 1.0000 100 chr13:110965257-11096575 1.0000 100 chr1:26620817-26621317 1.0000 100 chr5:59303187-59303687 1.0000 100 chr5:71455477-71455977 1.0000 100 chr3:11846575-11847075 1.0000 100 chr6:28866475-28866975 1.0000 100 chr7:133492167-133492667 1.0000 100 chr17:1399866-1400366 1.0000 100 chr19:40567075-40567575 1.0000 100 chr19:40090497-40090997 1.0000 100 chr1:236097028-236097528 1.0000 100 chr6:30907818-30908318 1.0000 100 chr9:33474197-33474697 1.0000 100 chr7:141738057-141738557 1.0000 100 chr19:39970589-39971089 1.0000 100 chr19:34171949-34172449 1.0000 100 chr1:155244582-155245082 1.0000 100 chr6:33271608-33272108 1.0000 100 chr19:39833787-39834287 1.0000 100 chr1_KI270713v1_random:2 1.0000 100 chr1:243255965-243256465 1.0000 100 chrUn_KI270467v1:2156-26 1.0000 100 chr9:133417906-133418406 1.0000 100 chrUn_KI270466v1:125-625 1.0000 100 chr12:12266900-12267400 1.0000 100 chrUn_KI270467v1:3129-36 1.0000 100 chrUn_KI270467v1:1948-24 1.0000 100 chrUn_KI270467v1:2926-34 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF501.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF501.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF501.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.265 C 0.235 G 0.235 T 0.265 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF501.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background): A 0.241 C 0.259 G 0.259 T 0.241 ******************************************************************************** ******************************************************************************** MOTIF TAAATAAATAAATAAATAAAT MEME-1 width = 21 sites = 169 llr = 4857 E-value = 4.6e-1523 ******************************************************************************** -------------------------------------------------------------------------------- Motif TAAATAAATAAATAAATAAAT MEME-1 Description -------------------------------------------------------------------------------- Simplified A :aaa:aaa:aaa:aaa:aaa: pos.-specific C ::::::::::::::::::::: probability G ::::::::::::::::::::: matrix T a:::a:::a:::a:::a:::a bits 2.1 ** ************ ** 1.8 ******************** 1.6 ********************* 1.4 ********************* Relative 1.2 ********************* Entropy 1.0 ********************* (41.5 bits) 0.8 ********************* 0.6 ********************* 0.4 ********************* 0.2 ********************* 0.0 --------------------- Multilevel TAAATAAATAAATAAATAAAT consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATAAATAAATAAATAAAT MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chr9:33474197-33474697 - 41 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr19:40567075-40567575 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr15:101945846-10194634 - 41 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chrX:63439525-63440025 + 40 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr12:48866317-48866817 - 65 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAAAGA chr10:35197186-35197686 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:32157863-32158363 + 40 1.05e-13 aataaataaa taaataaataaataaataaat aaataaaATa chr1:27181866-27182366 - 40 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATCA chr10:86796249-86796749 - 50 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATGT chr1:36158803-36159303 - 39 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAACAAA chr5:32282198-32282698 + 38 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:40103557-40104057 + 36 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr18:49439792-49440292 + 33 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:67698960-67699460 + 41 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:43709348-43709848 - 44 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr12:122512978-12251347 + 34 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr17:19255214-19255714 - 34 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr10:114649181-11464968 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:50882378-50882878 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr3:194427434-194427934 + 16 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr9:135985094-135985594 + 36 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:225654676-225655176 + 62 1.05e-13 aataaataaa taaataaataaataaataaat aaataaaATT chr19:34234635-34235135 - 39 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chrX:24143940-24144440 - 43 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr15:71084215-71084715 - 45 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr18:48717181-48717681 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:19187815-19188315 + 24 1.05e-13 attaaataaa taaataaataaataaataaat aaataaataa chr12:54882532-54883032 - 57 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr17:38667040-38667540 + 16 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:127023497-127023997 + 52 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:32398352-32398852 + 43 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:138866049-138866549 - 37 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr6:30162702-30163202 + 45 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:155489566-155490066 + 41 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr12:123312986-12331348 + 31 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:165854377-165854877 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr16:21572322-21572822 + 38 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr12:689840-690340 - 38 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr12:32017172-32017672 - 41 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr17:64607776-64608276 + 34 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr12:57258084-57258584 - 38 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr2:128227807-128228307 + 30 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:139489855-139490355 - 41 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:132992494-132992994 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr18:23654060-23654560 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:38065756-38066256 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr18:49514946-49515446 - 43 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr11:32925263-32925763 - 43 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr12:42215704-42216204 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr6:138525309-138525809 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:36643783-36644283 + 43 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:87284798-87285298 - 48 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr1:155575570-155576070 - 38 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:109425484-109425984 - 28 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr10:97421658-97422158 + 14 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr12:56219791-56220291 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataT chr1:155225053-155225553 - 38 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr3:181267272-181267772 - 30 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr6:96811614-96812114 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:177345510-177346010 - 39 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr1:240620625-240621125 - 47 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr1:113113291-113113791 - 49 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chrX:72209974-72210474 + 40 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr7:118054048-118054548 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr10:29813595-29814095 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr4:190111855-190112355 + 67 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:95920040-95920540 - 51 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:59594053-59594553 - 51 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr11:123279166-12327966 - 43 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr19:35461732-35462232 + 24 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:46532338-46532838 - 29 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:126819225-126819725 - 45 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:175559043-175559543 - 44 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:14858483-14858983 + 47 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:36992450-36992950 - 68 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAAATG chr1:100011455-100011955 - 39 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr7:84738536-84739036 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr10:101751758-10175225 + 27 1.05e-13 aataaataaa taaataaataaataaataaat aaataaatga chr15:75217542-75218042 - 23 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr1:153904046-153904546 + 45 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataT chr1:230796106-230796606 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr18:2565841-2566341 + 21 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr15:70865878-70866378 - 50 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr19:38766241-38766741 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr3:172143685-172144185 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr11:118577953-11857845 + 27 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr9:137038377-137038877 + 43 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:109801176-109801676 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr11:67122416-67122916 - 39 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr16:30642248-30642748 - 38 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr11:47519256-47519756 + 40 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:160300123-160300623 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:33122838-33123338 + 47 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:34214054-34214554 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAAGTAAAAG chr12:53550115-53550615 + 24 1.05e-13 aaaaaataaa taaataaataaataaataaat aaataaataa chr20:3554070-3554570 - 47 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr17:63254826-63255326 - 45 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr19:16590837-16591337 + 27 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr14:89905950-89906450 + 38 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr9:125282798-125283298 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:137302360-137302860 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr7:94942582-94943082 + 36 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:55074408-55074908 + 43 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr9:132357696-132358196 + 34 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr12:109939461-10993996 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr3:9938922-9939422 + 34 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr13:98580756-98581256 - 47 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr1:148409484-148409984 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr19:40301085-40301585 - 40 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr10:101947571-10194807 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataG chr10:91406948-91407448 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:92610361-92610861 + 50 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:237000143-237000643 - 38 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr18:65998902-65999402 - 37 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr17:32325925-32326425 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr12:57075164-57075664 + 40 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataG chr10:25876829-25877329 + 31 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr7:98598795-98599295 + 42 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr22:40158119-40158619 + 36 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr6:108155273-108155773 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:202829207-202829707 - 33 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr7:43965384-43965884 + 50 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr7:134894869-134895369 + 41 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr10:119534029-11953452 + 43 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:223186742-223187242 - 44 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAAAGA chr19:37160115-37160615 + 44 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:51493308-51493808 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr4:78704311-78704811 + 40 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:35964354-35964854 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATGA chr12:57207020-57207520 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaatag chr5:36019525-36020025 - 45 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr1:61235261-61235761 + 14 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:139370245-139370745 - 33 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAAGGC chr19:18106317-18106817 - 34 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr17:32176313-32176813 - 41 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr19:29505709-29506209 + 34 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr6:27840523-27841023 + 35 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr1:67536893-67537393 + 38 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr3:181531705-181532205 - 26 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr1:226747788-226748288 + 38 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr2:131083643-131084143 - 45 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr16:30499824-30500324 - 44 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr7:158785209-158785709 + 33 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr13:100861667-10086216 - 42 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr10:103359447-10335994 + 24 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr13:44823503-44824003 - 41 1.05e-13 TATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr5:118933655-118934155 + 36 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:40795139-40795639 - 38 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAAATG chr5:115311219-115311719 - 45 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr20:2579148-2579648 - 48 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr17:43576038-43576538 - 54 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr10:88419780-88420280 + 47 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr17:42789440-42789940 + 37 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr9:130700096-130700596 - 45 1.05e-13 AATAAATAAA TAAATAAATAAATAAATAAAT AAATAAATAA chr7:139835818-139836318 + 33 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr5:78762706-78763206 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr10:116657070-11665757 + 39 1.05e-13 aataaataaa taaataaataaataaataaat aaataaataa chr19:35385860-35386360 - 65 3.16e-13 AATAAATAAA TAAATAAATAAATAAATAAAA TTAGGACACA chr17:9255303-9255803 + 40 1.47e-12 aataaataaa taaataaataaatatataaat aaataaataa chrX:45011533-45012033 - 27 1.93e-12 ATAAATAAAA TAAATAAATAAATAAATAAAC AAACTAAAGA chr5:32367212-32367712 + 49 8.56e-12 ataaataaat aaagtaaataaataaataaat aaataaataa chr1:35380066-35380566 - 44 1.35e-11 AATAAATAAA TAAATAAATAAATAAAATAAA TAAATAAATA chr17:60753114-60753614 - 65 2.69e-11 AATAAATAAA TAAATAAATAAATAAAATAAG AGACAAATAA chr5:43014458-43014958 + 43 3.63e-11 ataaataaat aaataaaataaataaataaat aaataTATAT chr18:49506383-49506883 + 40 1.04e-10 aataaataaa taaataaataaataaaatata taaataaata chr10:72580222-72580722 - 40 1.65e-10 AATAAATAAA TAAATAAATTAATTAATTAAA TAAATAAATA chr13:33246971-33247471 + 42 2.22e-10 ataaataaat aaataaattaaataaataaat aaataaataa chr16:46492-46992 + 43 5.72e-10 aataaataaa taaataaataaaataaataaa taaataaata chr1:245044260-245044760 - 25 3.21e-09 AATAAATAAA TAAATGATAAAATAAAATAAA AAACTGAAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATAAATAAATAAATAAAT MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:33474197-33474697 1.1e-13 40_[-1]_39 chr19:40567075-40567575 1.1e-13 38_[+1]_41 chr15:101945846-10194634 1.1e-13 40_[-1]_39 chrX:63439525-63440025 1.1e-13 39_[+1]_40 chr12:48866317-48866817 1.1e-13 64_[-1]_15 chr10:35197186-35197686 1.1e-13 41_[-1]_38 chr5:32157863-32158363 1.1e-13 39_[+1]_40 chr1:27181866-27182366 1.1e-13 39_[-1]_40 chr10:86796249-86796749 1.1e-13 49_[-1]_30 chr1:36158803-36159303 1.1e-13 38_[-1]_41 chr5:32282198-32282698 1.1e-13 37_[+1]_42 chr19:40103557-40104057 1.1e-13 35_[+1]_44 chr18:49439792-49440292 1.1e-13 32_[+1]_47 chr1:67698960-67699460 1.1e-13 40_[+1]_39 chr19:43709348-43709848 1.1e-13 43_[-1]_36 chr12:122512978-12251347 1.1e-13 33_[+1]_46 chr17:19255214-19255714 1.1e-13 33_[-1]_46 chr10:114649181-11464968 1.1e-13 34_[+1]_45 chr1:50882378-50882878 1.1e-13 38_[+1]_41 chr3:194427434-194427934 1.1e-13 15_[+1]_64 chr9:135985094-135985594 1.1e-13 35_[+1]_44 chr1:225654676-225655176 1.1e-13 61_[+1]_18 chr19:34234635-34235135 1.1e-13 38_[-1]_41 chrX:24143940-24144440 1.1e-13 42_[-1]_37 chr15:71084215-71084715 1.1e-13 44_[-1]_35 chr18:48717181-48717681 1.1e-13 36_[+1]_43 chr1:19187815-19188315 1.1e-13 23_[+1]_56 chr12:54882532-54883032 1.1e-13 56_[-1]_23 chr17:38667040-38667540 1.1e-13 15_[+1]_64 chr5:127023497-127023997 1.1e-13 51_[+1]_28 chr19:32398352-32398852 1.1e-13 42_[+1]_37 chr5:138866049-138866549 1.1e-13 36_[-1]_43 chr6:30162702-30163202 1.1e-13 44_[+1]_35 chr1:155489566-155490066 1.1e-13 40_[+1]_39 chr12:123312986-12331348 1.1e-13 30_[+1]_49 chr1:165854377-165854877 1.1e-13 36_[+1]_43 chr16:21572322-21572822 1.1e-13 37_[+1]_42 chr12:689840-690340 1.1e-13 37_[-1]_42 chr12:32017172-32017672 1.1e-13 40_[-1]_39 chr17:64607776-64608276 1.1e-13 33_[+1]_46 chr12:57258084-57258584 1.1e-13 37_[-1]_42 chr2:128227807-128228307 1.1e-13 29_[+1]_50 chr5:139489855-139490355 1.1e-13 40_[-1]_39 chr5:132992494-132992994 1.1e-13 41_[-1]_38 chr18:23654060-23654560 1.1e-13 34_[+1]_45 chr19:38065756-38066256 1.1e-13 41_[-1]_38 chr18:49514946-49515446 1.1e-13 42_[-1]_37 chr11:32925263-32925763 1.1e-13 42_[-1]_37 chr12:42215704-42216204 1.1e-13 38_[+1]_41 chr6:138525309-138525809 1.1e-13 34_[+1]_45 chr5:36643783-36644283 1.1e-13 42_[+1]_37 chr5:87284798-87285298 1.1e-13 47_[-1]_32 chr1:155575570-155576070 1.1e-13 37_[-1]_42 chr5:109425484-109425984 1.1e-13 27_[-1]_52 chr10:97421658-97422158 1.1e-13 13_[+1]_66 chr12:56219791-56220291 1.1e-13 38_[+1]_41 chr1:155225053-155225553 1.1e-13 37_[-1]_42 chr3:181267272-181267772 1.1e-13 29_[-1]_50 chr6:96811614-96812114 1.1e-13 38_[+1]_41 chr5:177345510-177346010 1.1e-13 38_[-1]_41 chr1:240620625-240621125 1.1e-13 46_[-1]_33 chr1:113113291-113113791 1.1e-13 48_[-1]_31 chrX:72209974-72210474 1.1e-13 39_[+1]_40 chr7:118054048-118054548 1.1e-13 38_[+1]_41 chr10:29813595-29814095 1.1e-13 38_[+1]_41 chr4:190111855-190112355 1.1e-13 66_[+1]_13 chr5:95920040-95920540 1.1e-13 50_[-1]_29 chr5:59594053-59594553 1.1e-13 50_[-1]_29 chr11:123279166-12327966 1.1e-13 42_[-1]_37 chr19:35461732-35462232 1.1e-13 23_[+1]_56 chr19:46532338-46532838 1.1e-13 28_[-1]_51 chr5:126819225-126819725 1.1e-13 44_[-1]_35 chr5:175559043-175559543 1.1e-13 43_[-1]_36 chr5:14858483-14858983 1.1e-13 46_[+1]_33 chr5:36992450-36992950 1.1e-13 67_[-1]_12 chr1:100011455-100011955 1.1e-13 38_[-1]_41 chr7:84738536-84739036 1.1e-13 34_[+1]_45 chr10:101751758-10175225 1.1e-13 26_[+1]_53 chr15:75217542-75218042 1.1e-13 22_[-1]_57 chr1:153904046-153904546 1.1e-13 44_[+1]_35 chr1:230796106-230796606 1.1e-13 36_[+1]_43 chr18:2565841-2566341 1.1e-13 20_[+1]_59 chr15:70865878-70866378 1.1e-13 49_[-1]_30 chr19:38766241-38766741 1.1e-13 38_[+1]_41 chr3:172143685-172144185 1.1e-13 34_[+1]_45 chr11:118577953-11857845 1.1e-13 26_[+1]_53 chr9:137038377-137038877 1.1e-13 42_[+1]_37 chr1:109801176-109801676 1.1e-13 41_[-1]_38 chr11:67122416-67122916 1.1e-13 38_[-1]_41 chr16:30642248-30642748 1.1e-13 37_[-1]_42 chr11:47519256-47519756 1.1e-13 39_[+1]_40 chr1:160300123-160300623 1.1e-13 36_[+1]_43 chr19:33122838-33123338 1.1e-13 46_[+1]_33 chr19:34214054-34214554 1.1e-13 41_[-1]_38 chr12:53550115-53550615 1.1e-13 23_[+1]_56 chr20:3554070-3554570 1.1e-13 46_[-1]_33 chr17:63254826-63255326 1.1e-13 44_[-1]_35 chr19:16590837-16591337 1.1e-13 26_[+1]_53 chr14:89905950-89906450 1.1e-13 37_[+1]_42 chr9:125282798-125283298 1.1e-13 41_[-1]_38 chr5:137302360-137302860 1.1e-13 34_[+1]_45 chr7:94942582-94943082 1.1e-13 35_[+1]_44 chr1:55074408-55074908 1.1e-13 42_[+1]_37 chr9:132357696-132358196 1.1e-13 33_[+1]_46 chr12:109939461-10993996 1.1e-13 36_[+1]_43 chr3:9938922-9939422 1.1e-13 33_[+1]_46 chr13:98580756-98581256 1.1e-13 46_[-1]_33 chr1:148409484-148409984 1.1e-13 41_[-1]_38 chr19:40301085-40301585 1.1e-13 39_[-1]_40 chr10:101947571-10194807 1.1e-13 36_[+1]_43 chr10:91406948-91407448 1.1e-13 41_[-1]_38 chr5:92610361-92610861 1.1e-13 49_[+1]_30 chr1:237000143-237000643 1.1e-13 37_[-1]_42 chr18:65998902-65999402 1.1e-13 36_[-1]_43 chr17:32325925-32326425 1.1e-13 36_[+1]_43 chr12:57075164-57075664 1.1e-13 39_[+1]_40 chr10:25876829-25877329 1.1e-13 30_[+1]_49 chr7:98598795-98599295 1.1e-13 41_[+1]_38 chr22:40158119-40158619 1.1e-13 35_[+1]_44 chr6:108155273-108155773 1.1e-13 34_[+1]_45 chr1:202829207-202829707 1.1e-13 32_[-1]_47 chr7:43965384-43965884 1.1e-13 49_[+1]_30 chr7:134894869-134895369 1.1e-13 40_[+1]_39 chr10:119534029-11953452 1.1e-13 42_[+1]_37 chr1:223186742-223187242 1.1e-13 43_[-1]_36 chr19:37160115-37160615 1.1e-13 43_[+1]_36 chr1:51493308-51493808 1.1e-13 36_[+1]_43 chr4:78704311-78704811 1.1e-13 39_[+1]_40 chr19:35964354-35964854 1.1e-13 41_[-1]_38 chr12:57207020-57207520 1.1e-13 34_[+1]_45 chr5:36019525-36020025 1.1e-13 44_[-1]_35 chr1:61235261-61235761 1.1e-13 13_[+1]_66 chr5:139370245-139370745 1.1e-13 32_[-1]_47 chr19:18106317-18106817 1.1e-13 33_[-1]_46 chr17:32176313-32176813 1.1e-13 40_[-1]_39 chr19:29505709-29506209 1.1e-13 33_[+1]_46 chr6:27840523-27841023 1.1e-13 34_[+1]_45 chr1:67536893-67537393 1.1e-13 37_[+1]_42 chr3:181531705-181532205 1.1e-13 25_[-1]_54 chr1:226747788-226748288 1.1e-13 37_[+1]_42 chr2:131083643-131084143 1.1e-13 44_[-1]_35 chr16:30499824-30500324 1.1e-13 43_[-1]_36 chr7:158785209-158785709 1.1e-13 32_[+1]_47 chr13:100861667-10086216 1.1e-13 41_[-1]_38 chr10:103359447-10335994 1.1e-13 23_[+1]_56 chr13:44823503-44824003 1.1e-13 40_[-1]_39 chr5:118933655-118934155 1.1e-13 35_[+1]_44 chr19:40795139-40795639 1.1e-13 37_[-1]_42 chr5:115311219-115311719 1.1e-13 44_[-1]_35 chr20:2579148-2579648 1.1e-13 47_[-1]_32 chr17:43576038-43576538 1.1e-13 53_[-1]_26 chr10:88419780-88420280 1.1e-13 46_[+1]_33 chr17:42789440-42789940 1.1e-13 36_[+1]_43 chr9:130700096-130700596 1.1e-13 44_[-1]_35 chr7:139835818-139836318 1.1e-13 32_[+1]_47 chr5:78762706-78763206 1.1e-13 38_[+1]_41 chr10:116657070-11665757 1.1e-13 38_[+1]_41 chr19:35385860-35386360 3.2e-13 64_[-1]_15 chr17:9255303-9255803 1.5e-12 39_[+1]_40 chrX:45011533-45012033 1.9e-12 26_[-1]_53 chr5:32367212-32367712 8.6e-12 48_[+1]_31 chr1:35380066-35380566 1.4e-11 43_[-1]_36 chr17:60753114-60753614 2.7e-11 64_[-1]_15 chr5:43014458-43014958 3.6e-11 42_[+1]_37 chr18:49506383-49506883 1e-10 39_[+1]_40 chr10:72580222-72580722 1.6e-10 39_[-1]_40 chr13:33246971-33247471 2.2e-10 41_[+1]_38 chr16:46492-46992 5.7e-10 42_[+1]_37 chr1:245044260-245044760 3.2e-09 24_[-1]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATAAATAAATAAATAAAT MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TAAATAAATAAATAAATAAAT width=21 seqs=169 chr9:33474197-33474697 ( 41) TAAATAAATAAATAAATAAAT 1 chr19:40567075-40567575 ( 39) TAAATAAATAAATAAATAAAT 1 chr15:101945846-10194634 ( 41) TAAATAAATAAATAAATAAAT 1 chrX:63439525-63440025 ( 40) TAAATAAATAAATAAATAAAT 1 chr12:48866317-48866817 ( 65) TAAATAAATAAATAAATAAAT 1 chr10:35197186-35197686 ( 42) TAAATAAATAAATAAATAAAT 1 chr5:32157863-32158363 ( 40) TAAATAAATAAATAAATAAAT 1 chr1:27181866-27182366 ( 40) TAAATAAATAAATAAATAAAT 1 chr10:86796249-86796749 ( 50) TAAATAAATAAATAAATAAAT 1 chr1:36158803-36159303 ( 39) TAAATAAATAAATAAATAAAT 1 chr5:32282198-32282698 ( 38) TAAATAAATAAATAAATAAAT 1 chr19:40103557-40104057 ( 36) TAAATAAATAAATAAATAAAT 1 chr18:49439792-49440292 ( 33) TAAATAAATAAATAAATAAAT 1 chr1:67698960-67699460 ( 41) TAAATAAATAAATAAATAAAT 1 chr19:43709348-43709848 ( 44) TAAATAAATAAATAAATAAAT 1 chr12:122512978-12251347 ( 34) TAAATAAATAAATAAATAAAT 1 chr17:19255214-19255714 ( 34) TAAATAAATAAATAAATAAAT 1 chr10:114649181-11464968 ( 35) TAAATAAATAAATAAATAAAT 1 chr1:50882378-50882878 ( 39) TAAATAAATAAATAAATAAAT 1 chr3:194427434-194427934 ( 16) TAAATAAATAAATAAATAAAT 1 chr9:135985094-135985594 ( 36) TAAATAAATAAATAAATAAAT 1 chr1:225654676-225655176 ( 62) TAAATAAATAAATAAATAAAT 1 chr19:34234635-34235135 ( 39) TAAATAAATAAATAAATAAAT 1 chrX:24143940-24144440 ( 43) TAAATAAATAAATAAATAAAT 1 chr15:71084215-71084715 ( 45) TAAATAAATAAATAAATAAAT 1 chr18:48717181-48717681 ( 37) TAAATAAATAAATAAATAAAT 1 chr1:19187815-19188315 ( 24) TAAATAAATAAATAAATAAAT 1 chr12:54882532-54883032 ( 57) TAAATAAATAAATAAATAAAT 1 chr17:38667040-38667540 ( 16) TAAATAAATAAATAAATAAAT 1 chr5:127023497-127023997 ( 52) TAAATAAATAAATAAATAAAT 1 chr19:32398352-32398852 ( 43) TAAATAAATAAATAAATAAAT 1 chr5:138866049-138866549 ( 37) TAAATAAATAAATAAATAAAT 1 chr6:30162702-30163202 ( 45) TAAATAAATAAATAAATAAAT 1 chr1:155489566-155490066 ( 41) TAAATAAATAAATAAATAAAT 1 chr12:123312986-12331348 ( 31) TAAATAAATAAATAAATAAAT 1 chr1:165854377-165854877 ( 37) TAAATAAATAAATAAATAAAT 1 chr16:21572322-21572822 ( 38) TAAATAAATAAATAAATAAAT 1 chr12:689840-690340 ( 38) TAAATAAATAAATAAATAAAT 1 chr12:32017172-32017672 ( 41) TAAATAAATAAATAAATAAAT 1 chr17:64607776-64608276 ( 34) TAAATAAATAAATAAATAAAT 1 chr12:57258084-57258584 ( 38) TAAATAAATAAATAAATAAAT 1 chr2:128227807-128228307 ( 30) TAAATAAATAAATAAATAAAT 1 chr5:139489855-139490355 ( 41) TAAATAAATAAATAAATAAAT 1 chr5:132992494-132992994 ( 42) TAAATAAATAAATAAATAAAT 1 chr18:23654060-23654560 ( 35) TAAATAAATAAATAAATAAAT 1 chr19:38065756-38066256 ( 42) TAAATAAATAAATAAATAAAT 1 chr18:49514946-49515446 ( 43) TAAATAAATAAATAAATAAAT 1 chr11:32925263-32925763 ( 43) TAAATAAATAAATAAATAAAT 1 chr12:42215704-42216204 ( 39) TAAATAAATAAATAAATAAAT 1 chr6:138525309-138525809 ( 35) TAAATAAATAAATAAATAAAT 1 chr5:36643783-36644283 ( 43) TAAATAAATAAATAAATAAAT 1 chr5:87284798-87285298 ( 48) TAAATAAATAAATAAATAAAT 1 chr1:155575570-155576070 ( 38) TAAATAAATAAATAAATAAAT 1 chr5:109425484-109425984 ( 28) TAAATAAATAAATAAATAAAT 1 chr10:97421658-97422158 ( 14) TAAATAAATAAATAAATAAAT 1 chr12:56219791-56220291 ( 39) TAAATAAATAAATAAATAAAT 1 chr1:155225053-155225553 ( 38) TAAATAAATAAATAAATAAAT 1 chr3:181267272-181267772 ( 30) TAAATAAATAAATAAATAAAT 1 chr6:96811614-96812114 ( 39) TAAATAAATAAATAAATAAAT 1 chr5:177345510-177346010 ( 39) TAAATAAATAAATAAATAAAT 1 chr1:240620625-240621125 ( 47) TAAATAAATAAATAAATAAAT 1 chr1:113113291-113113791 ( 49) TAAATAAATAAATAAATAAAT 1 chrX:72209974-72210474 ( 40) TAAATAAATAAATAAATAAAT 1 chr7:118054048-118054548 ( 39) TAAATAAATAAATAAATAAAT 1 chr10:29813595-29814095 ( 39) TAAATAAATAAATAAATAAAT 1 chr4:190111855-190112355 ( 67) TAAATAAATAAATAAATAAAT 1 chr5:95920040-95920540 ( 51) TAAATAAATAAATAAATAAAT 1 chr5:59594053-59594553 ( 51) TAAATAAATAAATAAATAAAT 1 chr11:123279166-12327966 ( 43) TAAATAAATAAATAAATAAAT 1 chr19:35461732-35462232 ( 24) TAAATAAATAAATAAATAAAT 1 chr19:46532338-46532838 ( 29) TAAATAAATAAATAAATAAAT 1 chr5:126819225-126819725 ( 45) TAAATAAATAAATAAATAAAT 1 chr5:175559043-175559543 ( 44) TAAATAAATAAATAAATAAAT 1 chr5:14858483-14858983 ( 47) TAAATAAATAAATAAATAAAT 1 chr5:36992450-36992950 ( 68) TAAATAAATAAATAAATAAAT 1 chr1:100011455-100011955 ( 39) TAAATAAATAAATAAATAAAT 1 chr7:84738536-84739036 ( 35) TAAATAAATAAATAAATAAAT 1 chr10:101751758-10175225 ( 27) TAAATAAATAAATAAATAAAT 1 chr15:75217542-75218042 ( 23) TAAATAAATAAATAAATAAAT 1 chr1:153904046-153904546 ( 45) TAAATAAATAAATAAATAAAT 1 chr1:230796106-230796606 ( 37) TAAATAAATAAATAAATAAAT 1 chr18:2565841-2566341 ( 21) TAAATAAATAAATAAATAAAT 1 chr15:70865878-70866378 ( 50) TAAATAAATAAATAAATAAAT 1 chr19:38766241-38766741 ( 39) TAAATAAATAAATAAATAAAT 1 chr3:172143685-172144185 ( 35) TAAATAAATAAATAAATAAAT 1 chr11:118577953-11857845 ( 27) TAAATAAATAAATAAATAAAT 1 chr9:137038377-137038877 ( 43) TAAATAAATAAATAAATAAAT 1 chr1:109801176-109801676 ( 42) TAAATAAATAAATAAATAAAT 1 chr11:67122416-67122916 ( 39) TAAATAAATAAATAAATAAAT 1 chr16:30642248-30642748 ( 38) TAAATAAATAAATAAATAAAT 1 chr11:47519256-47519756 ( 40) TAAATAAATAAATAAATAAAT 1 chr1:160300123-160300623 ( 37) TAAATAAATAAATAAATAAAT 1 chr19:33122838-33123338 ( 47) TAAATAAATAAATAAATAAAT 1 chr19:34214054-34214554 ( 42) TAAATAAATAAATAAATAAAT 1 chr12:53550115-53550615 ( 24) TAAATAAATAAATAAATAAAT 1 chr20:3554070-3554570 ( 47) TAAATAAATAAATAAATAAAT 1 chr17:63254826-63255326 ( 45) TAAATAAATAAATAAATAAAT 1 chr19:16590837-16591337 ( 27) TAAATAAATAAATAAATAAAT 1 chr14:89905950-89906450 ( 38) TAAATAAATAAATAAATAAAT 1 chr9:125282798-125283298 ( 42) TAAATAAATAAATAAATAAAT 1 chr5:137302360-137302860 ( 35) TAAATAAATAAATAAATAAAT 1 chr7:94942582-94943082 ( 36) TAAATAAATAAATAAATAAAT 1 chr1:55074408-55074908 ( 43) TAAATAAATAAATAAATAAAT 1 chr9:132357696-132358196 ( 34) TAAATAAATAAATAAATAAAT 1 chr12:109939461-10993996 ( 37) TAAATAAATAAATAAATAAAT 1 chr3:9938922-9939422 ( 34) TAAATAAATAAATAAATAAAT 1 chr13:98580756-98581256 ( 47) TAAATAAATAAATAAATAAAT 1 chr1:148409484-148409984 ( 42) TAAATAAATAAATAAATAAAT 1 chr19:40301085-40301585 ( 40) TAAATAAATAAATAAATAAAT 1 chr10:101947571-10194807 ( 37) TAAATAAATAAATAAATAAAT 1 chr10:91406948-91407448 ( 42) TAAATAAATAAATAAATAAAT 1 chr5:92610361-92610861 ( 50) TAAATAAATAAATAAATAAAT 1 chr1:237000143-237000643 ( 38) TAAATAAATAAATAAATAAAT 1 chr18:65998902-65999402 ( 37) TAAATAAATAAATAAATAAAT 1 chr17:32325925-32326425 ( 37) TAAATAAATAAATAAATAAAT 1 chr12:57075164-57075664 ( 40) TAAATAAATAAATAAATAAAT 1 chr10:25876829-25877329 ( 31) TAAATAAATAAATAAATAAAT 1 chr7:98598795-98599295 ( 42) TAAATAAATAAATAAATAAAT 1 chr22:40158119-40158619 ( 36) TAAATAAATAAATAAATAAAT 1 chr6:108155273-108155773 ( 35) TAAATAAATAAATAAATAAAT 1 chr1:202829207-202829707 ( 33) TAAATAAATAAATAAATAAAT 1 chr7:43965384-43965884 ( 50) TAAATAAATAAATAAATAAAT 1 chr7:134894869-134895369 ( 41) TAAATAAATAAATAAATAAAT 1 chr10:119534029-11953452 ( 43) TAAATAAATAAATAAATAAAT 1 chr1:223186742-223187242 ( 44) TAAATAAATAAATAAATAAAT 1 chr19:37160115-37160615 ( 44) TAAATAAATAAATAAATAAAT 1 chr1:51493308-51493808 ( 37) TAAATAAATAAATAAATAAAT 1 chr4:78704311-78704811 ( 40) TAAATAAATAAATAAATAAAT 1 chr19:35964354-35964854 ( 42) TAAATAAATAAATAAATAAAT 1 chr12:57207020-57207520 ( 35) TAAATAAATAAATAAATAAAT 1 chr5:36019525-36020025 ( 45) TAAATAAATAAATAAATAAAT 1 chr1:61235261-61235761 ( 14) TAAATAAATAAATAAATAAAT 1 chr5:139370245-139370745 ( 33) TAAATAAATAAATAAATAAAT 1 chr19:18106317-18106817 ( 34) TAAATAAATAAATAAATAAAT 1 chr17:32176313-32176813 ( 41) TAAATAAATAAATAAATAAAT 1 chr19:29505709-29506209 ( 34) TAAATAAATAAATAAATAAAT 1 chr6:27840523-27841023 ( 35) TAAATAAATAAATAAATAAAT 1 chr1:67536893-67537393 ( 38) TAAATAAATAAATAAATAAAT 1 chr3:181531705-181532205 ( 26) TAAATAAATAAATAAATAAAT 1 chr1:226747788-226748288 ( 38) TAAATAAATAAATAAATAAAT 1 chr2:131083643-131084143 ( 45) TAAATAAATAAATAAATAAAT 1 chr16:30499824-30500324 ( 44) TAAATAAATAAATAAATAAAT 1 chr7:158785209-158785709 ( 33) TAAATAAATAAATAAATAAAT 1 chr13:100861667-10086216 ( 42) TAAATAAATAAATAAATAAAT 1 chr10:103359447-10335994 ( 24) TAAATAAATAAATAAATAAAT 1 chr13:44823503-44824003 ( 41) TAAATAAATAAATAAATAAAT 1 chr5:118933655-118934155 ( 36) TAAATAAATAAATAAATAAAT 1 chr19:40795139-40795639 ( 38) TAAATAAATAAATAAATAAAT 1 chr5:115311219-115311719 ( 45) TAAATAAATAAATAAATAAAT 1 chr20:2579148-2579648 ( 48) TAAATAAATAAATAAATAAAT 1 chr17:43576038-43576538 ( 54) TAAATAAATAAATAAATAAAT 1 chr10:88419780-88420280 ( 47) TAAATAAATAAATAAATAAAT 1 chr17:42789440-42789940 ( 37) TAAATAAATAAATAAATAAAT 1 chr9:130700096-130700596 ( 45) TAAATAAATAAATAAATAAAT 1 chr7:139835818-139836318 ( 33) TAAATAAATAAATAAATAAAT 1 chr5:78762706-78763206 ( 39) TAAATAAATAAATAAATAAAT 1 chr10:116657070-11665757 ( 39) TAAATAAATAAATAAATAAAT 1 chr19:35385860-35386360 ( 65) TAAATAAATAAATAAATAAAA 1 chr17:9255303-9255803 ( 40) TAAATAAATAAATATATAAAT 1 chrX:45011533-45012033 ( 27) TAAATAAATAAATAAATAAAC 1 chr5:32367212-32367712 ( 49) AAAGTAAATAAATAAATAAAT 1 chr1:35380066-35380566 ( 44) TAAATAAATAAATAAAATAAA 1 chr17:60753114-60753614 ( 65) TAAATAAATAAATAAAATAAG 1 chr5:43014458-43014958 ( 43) AAATAAAATAAATAAATAAAT 1 chr18:49506383-49506883 ( 40) TAAATAAATAAATAAAATATA 1 chr10:72580222-72580722 ( 40) TAAATAAATTAATTAATTAAA 1 chr13:33246971-33247471 ( 42) AAATAAATTAAATAAATAAAT 1 chr16:46492-46992 ( 43) TAAATAAATAAAATAAATAAA 1 chr1:245044260-245044760 ( 25) TAAATGATAAAATAAAATAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATAAATAAATAAATAAAT MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 6.74489 E= 4.6e-1523 -376 -1404 -1404 203 205 -1404 -1404 -1404 205 -1404 -1404 -1404 203 -1404 -545 -435 -435 -1404 -1404 203 204 -1404 -545 -1404 205 -1404 -1404 -1404 203 -1404 -1404 -435 -535 -1404 -1404 204 204 -1404 -1404 -535 205 -1404 -1404 -1404 205 -1404 -1404 -1404 -535 -1404 -1404 204 203 -1404 -1404 -435 204 -1404 -1404 -535 205 -1404 -1404 -1404 -303 -1404 -1404 201 200 -1404 -1404 -276 205 -1404 -1404 -1404 204 -1404 -1404 -535 -276 -545 -545 198 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATAAATAAATAAATAAAT MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 169 E= 4.6e-1523 0.017751 0.000000 0.000000 0.982249 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.982249 0.000000 0.005917 0.011834 0.011834 0.000000 0.000000 0.988166 0.994083 0.000000 0.005917 0.000000 1.000000 0.000000 0.000000 0.000000 0.988166 0.000000 0.000000 0.011834 0.005917 0.000000 0.000000 0.994083 0.994083 0.000000 0.000000 0.005917 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.005917 0.000000 0.000000 0.994083 0.988166 0.000000 0.000000 0.011834 0.994083 0.000000 0.000000 0.005917 1.000000 0.000000 0.000000 0.000000 0.029586 0.000000 0.000000 0.970414 0.964497 0.000000 0.000000 0.035503 1.000000 0.000000 0.000000 0.000000 0.994083 0.000000 0.000000 0.005917 0.035503 0.005917 0.005917 0.952663 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TAAATAAATAAATAAATAAAT MEME-1 regular expression -------------------------------------------------------------------------------- TAAATAAATAAATAAATAAAT -------------------------------------------------------------------------------- Time 381.75 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTATTTATTTATTTT MEME-2 width = 16 sites = 171 llr = 3107 E-value = 1.8e-764 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTT MEME-2 Description -------------------------------------------------------------------------------- Simplified A :::a:::a:::7:112 pos.-specific C :::::::::::::::: probability G ::::::::::::1111 matrix T aaa:aaa:aaa39776 bits 2.1 *** * * ** 1.8 *********** 1.6 *********** 1.4 *********** Relative 1.2 *********** * Entropy 1.0 ************* (26.2 bits) 0.8 *************** 0.6 **************** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel TTTATTTATTTATTTT consensus T A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr9:33474197-33474697 + 62 1.30e-10 tatttattta tttatttatttatttT TGGAGTagtc chr19:40567075-40567575 - 23 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGACAGTC chr15:101945846-10194634 + 62 1.30e-10 tatttattta tttatttatttatttt acttttgaca chr10:35197186-35197686 + 67 1.30e-10 tatttattta tttatttatttatttT Atgagacgga chr5:32282198-32282698 - 22 1.30e-10 TATTTATTTA TTTATTTATTTATTTT AGATGGAGTC chr19:40103557-40104057 - 20 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGACAGAGC chr1:67698960-67699460 - 25 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGACCGAG chr12:122512978-12251347 - 18 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGACGGAG chr17:19255214-19255714 + 55 1.30e-10 tatttattta tttatttatttatttT CTTGTGTTCT chr10:114649181-11464968 - 19 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GACAGAGTCT chr15:71084215-71084715 + 70 1.30e-10 tatttattta tttatttatttatttT TAgacacagg chr18:48717181-48717681 - 21 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TTAAAGACAG chrX:45011533-45012033 + 53 1.30e-10 atttatttta tttatttatttatttt ttgagacagg chr5:127023497-127023997 - 36 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TTGAGACAGA chr5:138866049-138866549 + 66 1.30e-10 tatttattta tttatttatttatttT GGTACAAATA chr6:30162702-30163202 - 29 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TACTGTAGCG chr17:9255303-9255803 - 24 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGATGGAGT chr12:123312986-12331348 - 15 1.30e-10 TATTTATTTA TTTATTTATTTATTTT AAGACCGAGT chr1:165854377-165854877 - 21 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TAAAAAAGGA chr16:21572322-21572822 - 22 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGATGGAG chr12:32017172-32017672 + 62 1.30e-10 tatttattta tttatttatttatttT Cagacagggt chr12:57258084-57258584 + 59 1.30e-10 tatttattta tttatttatttatttt gagatggagt chr5:139489855-139490355 + 62 1.30e-10 tatttattta tttatttatttatttt tgagatggag chr5:132992494-132992994 + 63 1.30e-10 tatttattta tttatttatttatttt ttgagatgga chr18:23654060-23654560 - 19 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TTGTGGAGGC chr18:49514946-49515446 + 68 1.30e-10 tatttattta tttatttatttatttt tgagactgag chr11:32925263-32925763 + 64 1.30e-10 tatttattta tttatttatttatttt ttgcagacag chr12:42215704-42216204 - 23 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TTGAGCTGGA chr6:138525309-138525809 - 19 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGACAAGGT chr5:87284798-87285298 + 73 1.30e-10 tatttattta tttatttatttatttt gagatggagt chr5:109425484-109425984 + 57 1.30e-10 tatttattta tttatttatttatttT TGgagaatga chr5:177345510-177346010 + 60 1.30e-10 tatttattta tttatttatttatttt ttgagacagt chr1:240620625-240621125 + 72 1.30e-10 tatttattta tttatttatttatttt gagacggagt chr1:113113291-113113791 + 74 1.30e-10 tatttattta tttatttatttatttt gagacggagt chr10:29813595-29814095 - 23 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGATGGAG chr4:190111855-190112355 - 51 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGACAGAGT chr5:95920040-95920540 + 72 1.30e-10 tatttattta tttatttatttatttt tgagacggag chr19:46532338-46532838 + 50 1.30e-10 tatttattta tttatttatttatttt tgagacagaa chr5:126819225-126819725 + 66 1.30e-10 tatttattta tttatttatttatttt tgagacagag chr5:175559043-175559543 + 69 1.30e-10 tatttattta tttatttatttatttt gagatggagt chr1:100011455-100011955 + 68 1.30e-10 tatttattta tttatttatttatttt tgacagattc chr7:84738536-84739036 - 19 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TTAGCGCAGG chr15:70865878-70866378 + 71 1.30e-10 tatttattta tttatttatttatttt tgagatggag chr11:118577953-11857845 - 11 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TTGAGAGAGT chr11:67122416-67122916 + 60 1.30e-10 tatttattta tttatttatttatttt ttgagacaga chr16:30642248-30642748 + 59 1.30e-10 tatttattta tttatttatttatttt tgagacagag chr1:160300123-160300623 - 21 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGTCGGAGT chr20:3554070-3554570 + 68 1.30e-10 tatttattta tttatttatttatttt gaaatggagt chr17:63254826-63255326 + 66 1.30e-10 tatttattta tttatttatttatttt tatttattta chr19:16590837-16591337 - 11 1.30e-10 TATTTATTTA TTTATTTATTTATTTT ATTTTATTTT chr14:89905950-89906450 - 22 1.30e-10 TATTTATTTA TTTATTTATTTATTTT AGTGCTCTAA chr5:137302360-137302860 - 19 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TTGAGATGGA chr1:55074408-55074908 - 27 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGACAGGG chr12:109939461-10993996 - 21 1.30e-10 TATTTATTTA TTTATTTATTTATTTT ATTTATTTTT chr3:9938922-9939422 - 18 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TAGTGACAGG chr10:91406948-91407448 + 67 1.30e-10 tatttattta tttatttatttatttt tggtattttt chr18:65998902-65999402 + 58 1.30e-10 tatttattta tttatttatttatttt ttgagatgga chr6:108155273-108155773 - 19 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGACAGAG chr7:43965384-43965884 - 34 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGATGGAGT chr10:119534029-11953452 - 27 1.30e-10 TATTTATTTA TTTATTTATTTATTTT AAGACAGGTT chr19:37160115-37160615 - 28 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGACAGGT chr5:36019525-36020025 + 70 1.30e-10 tatttattta tttatttatttatttt gagatggtgt chr19:18106317-18106817 + 55 1.30e-10 tatttattta tttatttatttatttt tgagatggag chr17:32176313-32176813 + 62 1.30e-10 tatttattta tttatttatttatttt gagacagagt chr19:29505709-29506209 - 18 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGACAGAG chr6:27840523-27841023 - 19 1.30e-10 TATTTATTTA TTTATTTATTTATTTT AAGAGGTAGG chr1:226747788-226748288 - 22 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGAGACAGAG chr7:158785209-158785709 - 17 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGACGGAGT chr10:103359447-10335994 - 8 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TTGAGAC chr5:115311219-115311719 + 66 1.30e-10 tatttattta tttatttatttatttt gagatggagt chr10:88419780-88420280 - 31 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGATGGAGT chr7:139835818-139836318 - 17 1.30e-10 TATTTATTTA TTTATTTATTTATTTT TGCAGCTATT chr10:116657070-11665757 - 23 1.30e-10 TATTTATTTA TTTATTTATTTATTTT GAGACAGCGT chr1:50882378-50882878 - 23 2.59e-10 TATTTATTTA TTTATTTATTTATTTA AGACAGAGTC chr19:34234635-34235135 + 60 2.59e-10 tatttattta tttatttatttattta tttGgagcca chr5:32367212-32367712 - 32 2.59e-10 ATTTACTTTA TTTATTTATTTATTTA TTATTTTTGA chr12:689840-690340 + 59 2.59e-10 tatttattta tttatttatttattta tttgagacgg chr2:128227807-128228307 - 63 2.59e-10 CTAAACTTTA TTTATTTATTTATTTA TATTATTTAT chr6:96811614-96812114 - 63 2.59e-10 TGCCTTTTAT TTTATTTATTTATTTA TTTATTTATT chr11:123279166-12327966 + 64 2.59e-10 tatttattta tttatttatttattta tCtgagaccg chr19:35461732-35462232 - 8 2.59e-10 TATTTATTTA TTTATTTATTTATTTA GAGATGG chr11:47519256-47519756 - 24 2.59e-10 TATTTATTTA TTTATTTATTTATTTA GAGATGGAGT chr7:94942582-94943082 - 60 2.59e-10 TTGGCAAACT TTTATTTATTTATTTA TTTATTTATT chr9:132357696-132358196 - 58 2.59e-10 TCCCAGTCTT TTTATTTATTTATTTA TTTATTTATT chr1:237000143-237000643 + 59 2.59e-10 tatttattta tttatttatttattta tttagagata chr10:25876829-25877329 - 55 2.59e-10 TAACTCCAGA TTTATTTATTTATTTA TTTATTTATT chr1:51493308-51493808 - 21 2.59e-10 TATTTATTTA TTTATTTATTTATTTA ATTTGAGACT chr12:57207020-57207520 - 82 2.59e-10 TTA TTTATTTATTTATTTA TTTAGAGACC chr10:17584323-17584823 - 2 2.59e-10 TTGGGATTTA TTTATTTATTTATTTA T chr1:67536893-67537393 - 22 2.59e-10 TATTTATTTA TTTATTTATTTATTTA GAGACACGGT chr5:59594053-59594553 + 72 5.28e-10 tatttattta tttatttatttatttg gcagagtttc chr18:2565841-2566341 - 5 5.28e-10 TATTTATTTA TTTATTTATTTATTTG AGAC chr1:202829207-202829707 + 54 5.28e-10 tatttattta tttatttatttatttG tttttgagat chr16:30499824-30500324 + 65 5.28e-10 tatttattta tttatttatttatttg agacagagtc chr9:135985094-135985594 - 20 6.57e-10 TATTTATTTA TTTATTTATTTATTAT TGAGACAAGG chr3:181267272-181267772 + 51 6.57e-10 tatttattta tttatttatttattat tatactttaa chr14:102623099-10262359 + 77 6.57e-10 atttacttcc tttatttatttattat ttatttat chr7:98598795-98599295 - 26 6.57e-10 TATTTATTTA TTTATTTATTTATTAT TTTTTTGTTT chr9:125282798-125283298 + 63 9.36e-10 tatttattta tttatttatttatgtt tgagagggag chr1:230796106-230796606 - 21 1.19e-09 TATTTATTTA TTTATTTATTTATATT TTTGAGATGG chr12:53550115-53550615 - 57 1.19e-09 CTGTTTTCTC TTTATTTATTTATATT TATTATTTAT chr12:57075164-57075664 - 24 1.19e-09 TATTTATTTA TTTATTTATTTATATT GAAATGGAGT chr1:35380066-35380566 + 65 1.33e-09 tatttattta tttatttatttttttg agacagagtc chr9:130700096-130700596 + 66 1.33e-09 tatttattta tttatttatttttttg agacggagtt chr1:27181866-27182366 + 61 1.87e-09 tatttattta tttatttatttattga gatggagttt chr19:32398352-32398852 - 27 1.87e-09 TATTTATTTA TTTATTTATTTATTGA GACAGGATTT chr7:118054048-118054548 - 23 1.87e-09 TATTTATTTA TTTATTTATTTATTGA GATGGAGTTT chr5:14858483-14858983 - 31 1.87e-09 TATTTATTTA TTTATTTATTTATTGA GATGGATTCT chr17:32325925-32326425 - 21 1.87e-09 TATTTATTTA TTTATTTATTTATTGA GACAGGGTCC chr22:40158119-40158619 - 20 1.87e-09 TATTTATTTA TTTATTTATTTATTGA AGATGGAGTT chr12:54882532-54883032 + 78 2.42e-09 tatttattta tttatttatttTTGTT TGTTTAA chr1:109801176-109801676 + 63 2.69e-09 tatttattta tttatttatttatttc tcattctgtc chr7:134894869-134895369 - 25 2.69e-09 TATTTATTTA TTTATTTATTTATTTC CCAGCACTGT chr20:2579148-2579648 + 69 2.69e-09 tatttattta tttatttatttttatt tatttttgag chr18:49439792-49440292 - 17 3.53e-09 TATTTATTTA TTTATTTATTTATTGG TGACAGAGTC chrX:72209974-72210474 - 24 4.49e-09 TATTTATTTA TTTATTTATTTTTTAA GAGACAGTCT chrX:24143940-24144440 + 64 5.05e-09 tatttattta tttatttattttttga gacagggtct chr5:36643783-36644283 - 27 5.05e-09 TATTTATTTA TTTATTTATTTTTTGA GACGGAGTCT chr3:181531705-181532205 + 47 5.72e-09 tatttattta tttatttatttattCA ACAAAGTTTT chr1:225654676-225655176 - 46 6.69e-09 TATTTATTTA TTTATTTATTTTTTAG ATGGAGTCTC chr5:78762706-78763206 - 68 6.69e-09 AGACTGGACC TTTATTTATTTGTTTT ATTTATTTAT chr1:155225053-155225553 + 59 7.67e-09 tatttattta tttatttatttactta ttgagacaga chr1:148409484-148409984 + 63 7.67e-09 tatttattta tttatttatttTTCTT TCCCTGCTCT chrX:63439525-63440025 - 24 8.22e-09 TATTTATTTA TTTATTTATTTTCTTT TGCTAATTTT chr18:49506383-49506883 - 24 8.22e-09 TATTTATTTA TTTATTTATTTTCTTT TTTGAGATGG chr1:223186742-223187242 + 65 9.91e-09 tatttattta tttatttatttataga tagggactca chr10:86796249-86796749 + 71 1.09e-08 tatttattta tttatttatttTTAGT ATTTTGAGAG chr19:34214054-34214554 + 63 1.20e-08 tatttattta tttatttatttatgag acagggcctt chr5:92610361-92610861 - 34 1.54e-08 TATTTATTTA TTTATTTATTTTATTA TACTTTAAGT chr19:40795139-40795639 + 59 1.54e-08 tatttattta tttatttatttaaatt ttttgagatg chr17:42789440-42789940 - 21 1.91e-08 TATTTATTTA TTTATTTATTTTTAGA CAGAATCTCA chr5:43014458-43014958 - 26 2.46e-08 ATTTTATTTA TTTATTTATTTTTGCT GTCATTAGCC chr19:38065756-38066256 + 63 2.46e-08 tatttattta tttatttatttttgag gcaacgtctt chr1:155575570-155576070 + 59 2.46e-08 tatttattta tttatttatttttgag acagagttcg chr12:56219791-56220291 - 23 2.46e-08 TATTTATTTA TTTATTTATTTTTGAG ACAGGGTCTC chr10:101751758-10175225 - 11 2.46e-08 TATTTATTTA TTTATTTATTTTTGAG ACGGGGTTAC chr15:75217542-75218042 + 44 2.46e-08 tatttattta tttatttatttttgag atgaagtcta chr19:38766241-38766741 - 23 2.46e-08 TATTTATTTA TTTATTTATTTTTGAG ATGGAGTTCC chr9:137038377-137038877 - 27 2.46e-08 TATTTATTTA TTTATTTATTTTTGAG ACGTAGTTTC chr19:33122838-33123338 - 31 2.46e-08 TATTTATTTA TTTATTTATTTTTGAG ACAGCATCTC chr10:101947571-10194807 - 21 2.46e-08 TATTTATTTA TTTATTTATTTTTGAG TTTCGCTCTT chr1:245044260-245044760 + 46 2.46e-08 ttatCAttta tttatttatttttgag acggagtctc chr13:100861667-10086216 + 63 2.46e-08 tatttattta tttatttatttttgct tgtgtggcct chr1:61235261-61235761 - 47 2.79e-08 TTTGTTCATT TTTTTTTATTTTTTAT TTTTATTTAT chr13:44823503-44824003 + 62 3.03e-08 tatttattta tttatttatatttttt tgataccgag chr17:64607776-64608276 - 18 3.31e-08 TATTTATTTA TTTATTTATTTATGAC AGAGTCTTGC chr1:19187815-19188315 - 8 4.66e-08 TATTTATTTA TTTATTTAATTTTTTG TTTTGAG chr5:118933655-118934155 - 20 6.42e-08 TATTTATTTA TTTATTTATTTAGGTC AGTTCCCTGG chr19:43709348-43709848 + 65 7.77e-08 tatttattta tttatttatttcgtta tttacttatt chr13:33246971-33247471 - 25 7.77e-08 AATTTATTTA TTTATTTATTTATCCG AGACAGAGTC chr10:72580222-72580722 + 61 1.04e-07 aatttattta tttatttattttgaga cagagtctca chr5:32157863-32158363 - 24 1.04e-07 TATTTATTTA TTTATTTATTTTGAGA CAGAGTTTAA chr1:36158803-36159303 + 60 1.04e-07 tatttattta tttatttattttgaga cagagtcttg chr1:155489566-155490066 - 25 1.04e-07 TATTTATTTA TTTATTTATTTTGAGA CAGTGTCTCC chr3:172143685-172144185 - 19 1.04e-07 TATTTATTTA TTTATTTATTTTGAGA TGGAGGCTCA chr13:98580756-98581256 + 68 1.04e-07 tatttattta tttatttattttgaga tggagtctcg chr19:35964354-35964854 + 63 1.04e-07 tatttattta tttatttattttgaga tggagtttca chr5:139370245-139370745 + 54 1.74e-07 tatttattta tttatttatttTCAag acagagtctc chr16:46492-46992 - 27 1.90e-07 TATTTATTTA TTTATTTATTTAAGAC AGAGTCTTGT chr1:179877161-179877661 - 17 2.47e-07 TACTAATTAC TTTATTTTTTATTTTT ATAGCGACAG chr2:212228586-212229086 + 51 2.47e-07 TTCCAAATTG TTTATTTTTTTTCTGT AAAGTTTAGA chr1:153904046-153904546 - 29 3.29e-07 TATTTATTTA TTTATTTATTTGAGAT GGAGTTTCAG chr18:49863855-49864355 - 9 3.64e-07 TAGATTAGTG TTTTTTTAATTATCTT TACCCACG chr19:40301085-40301585 + 61 3.89e-07 tatttattta tttatttattcttgag acagagtctc chr1:223840853-223841353 - 34 4.63e-07 GCTCTGCTAA TTTTTGTATTTTTTAG TAGAGACAGG chr2:131083643-131084143 + 66 4.63e-07 tatttattta tttatttatttTCCCa gacggagtct chr6:28898029-28898529 + 52 5.89e-07 gcccggctaa tttttgtatttttagt agagacgggg chr17:64667732-64668232 + 67 5.89e-07 gcccaaataa tttttgtatttttagt agagatcagg chr19:50136745-50137245 - 42 6.37e-07 TACAGACATG TTTTTTTTTTTAAGTT AAAAGAGGAA chr4:78704311-78704811 - 24 9.79e-07 TATTTATTTA TTTATTTATTTCACTC TGTCACCCAG chr17:43576038-43576538 + 75 1.16e-06 tatttattta tttatttattgagaca gagtctcact -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:33474197-33474697 1.3e-10 61_[+2]_23 chr19:40567075-40567575 1.3e-10 22_[-2]_62 chr15:101945846-10194634 1.3e-10 61_[+2]_23 chr10:35197186-35197686 1.3e-10 66_[+2]_18 chr5:32282198-32282698 1.3e-10 21_[-2]_63 chr19:40103557-40104057 1.3e-10 19_[-2]_65 chr1:67698960-67699460 1.3e-10 24_[-2]_60 chr12:122512978-12251347 1.3e-10 17_[-2]_67 chr17:19255214-19255714 1.3e-10 54_[+2]_30 chr10:114649181-11464968 1.3e-10 18_[-2]_66 chr15:71084215-71084715 1.3e-10 69_[+2]_15 chr18:48717181-48717681 1.3e-10 20_[-2]_64 chrX:45011533-45012033 1.3e-10 52_[+2]_32 chr5:127023497-127023997 1.3e-10 35_[-2]_49 chr5:138866049-138866549 1.3e-10 65_[+2]_19 chr6:30162702-30163202 1.3e-10 28_[-2]_56 chr17:9255303-9255803 1.3e-10 23_[-2]_61 chr12:123312986-12331348 1.3e-10 14_[-2]_70 chr1:165854377-165854877 1.3e-10 20_[-2]_64 chr16:21572322-21572822 1.3e-10 21_[-2]_63 chr12:32017172-32017672 1.3e-10 61_[+2]_23 chr12:57258084-57258584 1.3e-10 58_[+2]_26 chr5:139489855-139490355 1.3e-10 61_[+2]_23 chr5:132992494-132992994 1.3e-10 62_[+2]_22 chr18:23654060-23654560 1.3e-10 18_[-2]_66 chr18:49514946-49515446 1.3e-10 67_[+2]_17 chr11:32925263-32925763 1.3e-10 63_[+2]_21 chr12:42215704-42216204 1.3e-10 22_[-2]_62 chr6:138525309-138525809 1.3e-10 18_[-2]_66 chr5:87284798-87285298 1.3e-10 72_[+2]_12 chr5:109425484-109425984 1.3e-10 56_[+2]_28 chr5:177345510-177346010 1.3e-10 59_[+2]_25 chr1:240620625-240621125 1.3e-10 71_[+2]_13 chr1:113113291-113113791 1.3e-10 73_[+2]_11 chr10:29813595-29814095 1.3e-10 22_[-2]_62 chr4:190111855-190112355 1.3e-10 50_[-2]_34 chr5:95920040-95920540 1.3e-10 71_[+2]_13 chr19:46532338-46532838 1.3e-10 49_[+2]_35 chr5:126819225-126819725 1.3e-10 65_[+2]_19 chr5:175559043-175559543 1.3e-10 68_[+2]_16 chr1:100011455-100011955 1.3e-10 67_[+2]_17 chr7:84738536-84739036 1.3e-10 18_[-2]_66 chr15:70865878-70866378 1.3e-10 70_[+2]_14 chr11:118577953-11857845 1.3e-10 10_[-2]_74 chr11:67122416-67122916 1.3e-10 59_[+2]_25 chr16:30642248-30642748 1.3e-10 58_[+2]_26 chr1:160300123-160300623 1.3e-10 20_[-2]_64 chr20:3554070-3554570 1.3e-10 67_[+2]_17 chr17:63254826-63255326 1.3e-10 65_[+2]_19 chr19:16590837-16591337 1.3e-10 10_[-2]_74 chr14:89905950-89906450 1.3e-10 21_[-2]_63 chr5:137302360-137302860 1.3e-10 18_[-2]_66 chr1:55074408-55074908 1.3e-10 26_[-2]_58 chr12:109939461-10993996 1.3e-10 20_[-2]_64 chr3:9938922-9939422 1.3e-10 17_[-2]_67 chr10:91406948-91407448 1.3e-10 66_[+2]_18 chr18:65998902-65999402 1.3e-10 57_[+2]_27 chr6:108155273-108155773 1.3e-10 18_[-2]_66 chr7:43965384-43965884 1.3e-10 33_[-2]_51 chr10:119534029-11953452 1.3e-10 26_[-2]_58 chr19:37160115-37160615 1.3e-10 27_[-2]_57 chr5:36019525-36020025 1.3e-10 69_[+2]_15 chr19:18106317-18106817 1.3e-10 54_[+2]_30 chr17:32176313-32176813 1.3e-10 61_[+2]_23 chr19:29505709-29506209 1.3e-10 17_[-2]_67 chr6:27840523-27841023 1.3e-10 18_[-2]_66 chr1:226747788-226748288 1.3e-10 21_[-2]_63 chr7:158785209-158785709 1.3e-10 16_[-2]_68 chr10:103359447-10335994 1.3e-10 7_[-2]_77 chr5:115311219-115311719 1.3e-10 65_[+2]_19 chr10:88419780-88420280 1.3e-10 30_[-2]_54 chr7:139835818-139836318 1.3e-10 16_[-2]_68 chr10:116657070-11665757 1.3e-10 22_[-2]_62 chr1:50882378-50882878 2.6e-10 22_[-2]_62 chr19:34234635-34235135 2.6e-10 59_[+2]_25 chr5:32367212-32367712 2.6e-10 31_[-2]_53 chr12:689840-690340 2.6e-10 58_[+2]_26 chr2:128227807-128228307 2.6e-10 62_[-2]_22 chr6:96811614-96812114 2.6e-10 62_[-2]_22 chr11:123279166-12327966 2.6e-10 63_[+2]_21 chr19:35461732-35462232 2.6e-10 7_[-2]_77 chr11:47519256-47519756 2.6e-10 23_[-2]_61 chr7:94942582-94943082 2.6e-10 59_[-2]_25 chr9:132357696-132358196 2.6e-10 57_[-2]_27 chr1:237000143-237000643 2.6e-10 58_[+2]_26 chr10:25876829-25877329 2.6e-10 54_[-2]_30 chr1:51493308-51493808 2.6e-10 20_[-2]_64 chr12:57207020-57207520 2.6e-10 81_[-2]_3 chr10:17584323-17584823 2.6e-10 1_[-2]_83 chr1:67536893-67537393 2.6e-10 21_[-2]_63 chr5:59594053-59594553 5.3e-10 71_[+2]_13 chr18:2565841-2566341 5.3e-10 4_[-2]_80 chr1:202829207-202829707 5.3e-10 53_[+2]_31 chr16:30499824-30500324 5.3e-10 64_[+2]_20 chr9:135985094-135985594 6.6e-10 19_[-2]_65 chr3:181267272-181267772 6.6e-10 50_[+2]_34 chr14:102623099-10262359 6.6e-10 76_[+2]_8 chr7:98598795-98599295 6.6e-10 25_[-2]_59 chr9:125282798-125283298 9.4e-10 62_[+2]_22 chr1:230796106-230796606 1.2e-09 20_[-2]_64 chr12:53550115-53550615 1.2e-09 56_[-2]_28 chr12:57075164-57075664 1.2e-09 23_[-2]_61 chr1:35380066-35380566 1.3e-09 64_[+2]_20 chr9:130700096-130700596 1.3e-09 65_[+2]_19 chr1:27181866-27182366 1.9e-09 60_[+2]_24 chr19:32398352-32398852 1.9e-09 26_[-2]_58 chr7:118054048-118054548 1.9e-09 22_[-2]_62 chr5:14858483-14858983 1.9e-09 30_[-2]_54 chr17:32325925-32326425 1.9e-09 20_[-2]_64 chr22:40158119-40158619 1.9e-09 19_[-2]_65 chr12:54882532-54883032 2.4e-09 77_[+2]_7 chr1:109801176-109801676 2.7e-09 62_[+2]_22 chr7:134894869-134895369 2.7e-09 24_[-2]_60 chr20:2579148-2579648 2.7e-09 68_[+2]_16 chr18:49439792-49440292 3.5e-09 16_[-2]_68 chrX:72209974-72210474 4.5e-09 23_[-2]_61 chrX:24143940-24144440 5e-09 63_[+2]_21 chr5:36643783-36644283 5e-09 26_[-2]_58 chr3:181531705-181532205 5.7e-09 46_[+2]_38 chr1:225654676-225655176 6.7e-09 45_[-2]_39 chr5:78762706-78763206 6.7e-09 67_[-2]_17 chr1:155225053-155225553 7.7e-09 58_[+2]_26 chr1:148409484-148409984 7.7e-09 62_[+2]_22 chrX:63439525-63440025 8.2e-09 23_[-2]_61 chr18:49506383-49506883 8.2e-09 23_[-2]_61 chr1:223186742-223187242 9.9e-09 64_[+2]_20 chr10:86796249-86796749 1.1e-08 70_[+2]_14 chr19:34214054-34214554 1.2e-08 62_[+2]_22 chr5:92610361-92610861 1.5e-08 33_[-2]_51 chr19:40795139-40795639 1.5e-08 58_[+2]_26 chr17:42789440-42789940 1.9e-08 20_[-2]_64 chr5:43014458-43014958 2.5e-08 25_[-2]_59 chr19:38065756-38066256 2.5e-08 62_[+2]_22 chr1:155575570-155576070 2.5e-08 58_[+2]_26 chr12:56219791-56220291 2.5e-08 22_[-2]_62 chr10:101751758-10175225 2.5e-08 10_[-2]_74 chr15:75217542-75218042 2.5e-08 43_[+2]_41 chr19:38766241-38766741 2.5e-08 22_[-2]_62 chr9:137038377-137038877 2.5e-08 26_[-2]_58 chr19:33122838-33123338 2.5e-08 30_[-2]_54 chr10:101947571-10194807 2.5e-08 20_[-2]_64 chr1:245044260-245044760 2.5e-08 45_[+2]_39 chr13:100861667-10086216 2.5e-08 62_[+2]_22 chr1:61235261-61235761 2.8e-08 46_[-2]_38 chr13:44823503-44824003 3e-08 61_[+2]_23 chr17:64607776-64608276 3.3e-08 17_[-2]_67 chr1:19187815-19188315 4.7e-08 7_[-2]_77 chr5:118933655-118934155 6.4e-08 19_[-2]_65 chr19:43709348-43709848 7.8e-08 64_[+2]_20 chr13:33246971-33247471 7.8e-08 24_[-2]_60 chr10:72580222-72580722 1e-07 60_[+2]_24 chr5:32157863-32158363 1e-07 23_[-2]_61 chr1:36158803-36159303 1e-07 59_[+2]_25 chr1:155489566-155490066 1e-07 24_[-2]_60 chr3:172143685-172144185 1e-07 18_[-2]_66 chr13:98580756-98581256 1e-07 67_[+2]_17 chr19:35964354-35964854 1e-07 62_[+2]_22 chr5:139370245-139370745 1.7e-07 53_[+2]_31 chr16:46492-46992 1.9e-07 26_[-2]_58 chr1:179877161-179877661 2.5e-07 16_[-2]_68 chr2:212228586-212229086 2.5e-07 50_[+2]_34 chr1:153904046-153904546 3.3e-07 28_[-2]_56 chr18:49863855-49864355 3.6e-07 8_[-2]_76 chr19:40301085-40301585 3.9e-07 60_[+2]_24 chr1:223840853-223841353 4.6e-07 33_[-2]_51 chr2:131083643-131084143 4.6e-07 65_[+2]_19 chr6:28898029-28898529 5.9e-07 51_[+2]_33 chr17:64667732-64668232 5.9e-07 66_[+2]_18 chr19:50136745-50137245 6.4e-07 41_[-2]_43 chr4:78704311-78704811 9.8e-07 23_[-2]_61 chr17:43576038-43576538 1.2e-06 74_[+2]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTATTTATTTATTTT width=16 seqs=171 chr9:33474197-33474697 ( 62) TTTATTTATTTATTTT 1 chr19:40567075-40567575 ( 23) TTTATTTATTTATTTT 1 chr15:101945846-10194634 ( 62) TTTATTTATTTATTTT 1 chr10:35197186-35197686 ( 67) TTTATTTATTTATTTT 1 chr5:32282198-32282698 ( 22) TTTATTTATTTATTTT 1 chr19:40103557-40104057 ( 20) TTTATTTATTTATTTT 1 chr1:67698960-67699460 ( 25) TTTATTTATTTATTTT 1 chr12:122512978-12251347 ( 18) TTTATTTATTTATTTT 1 chr17:19255214-19255714 ( 55) TTTATTTATTTATTTT 1 chr10:114649181-11464968 ( 19) TTTATTTATTTATTTT 1 chr15:71084215-71084715 ( 70) TTTATTTATTTATTTT 1 chr18:48717181-48717681 ( 21) TTTATTTATTTATTTT 1 chrX:45011533-45012033 ( 53) TTTATTTATTTATTTT 1 chr5:127023497-127023997 ( 36) TTTATTTATTTATTTT 1 chr5:138866049-138866549 ( 66) TTTATTTATTTATTTT 1 chr6:30162702-30163202 ( 29) TTTATTTATTTATTTT 1 chr17:9255303-9255803 ( 24) TTTATTTATTTATTTT 1 chr12:123312986-12331348 ( 15) TTTATTTATTTATTTT 1 chr1:165854377-165854877 ( 21) TTTATTTATTTATTTT 1 chr16:21572322-21572822 ( 22) TTTATTTATTTATTTT 1 chr12:32017172-32017672 ( 62) TTTATTTATTTATTTT 1 chr12:57258084-57258584 ( 59) TTTATTTATTTATTTT 1 chr5:139489855-139490355 ( 62) TTTATTTATTTATTTT 1 chr5:132992494-132992994 ( 63) TTTATTTATTTATTTT 1 chr18:23654060-23654560 ( 19) TTTATTTATTTATTTT 1 chr18:49514946-49515446 ( 68) TTTATTTATTTATTTT 1 chr11:32925263-32925763 ( 64) TTTATTTATTTATTTT 1 chr12:42215704-42216204 ( 23) TTTATTTATTTATTTT 1 chr6:138525309-138525809 ( 19) TTTATTTATTTATTTT 1 chr5:87284798-87285298 ( 73) TTTATTTATTTATTTT 1 chr5:109425484-109425984 ( 57) TTTATTTATTTATTTT 1 chr5:177345510-177346010 ( 60) TTTATTTATTTATTTT 1 chr1:240620625-240621125 ( 72) TTTATTTATTTATTTT 1 chr1:113113291-113113791 ( 74) TTTATTTATTTATTTT 1 chr10:29813595-29814095 ( 23) TTTATTTATTTATTTT 1 chr4:190111855-190112355 ( 51) TTTATTTATTTATTTT 1 chr5:95920040-95920540 ( 72) TTTATTTATTTATTTT 1 chr19:46532338-46532838 ( 50) TTTATTTATTTATTTT 1 chr5:126819225-126819725 ( 66) TTTATTTATTTATTTT 1 chr5:175559043-175559543 ( 69) TTTATTTATTTATTTT 1 chr1:100011455-100011955 ( 68) TTTATTTATTTATTTT 1 chr7:84738536-84739036 ( 19) TTTATTTATTTATTTT 1 chr15:70865878-70866378 ( 71) TTTATTTATTTATTTT 1 chr11:118577953-11857845 ( 11) TTTATTTATTTATTTT 1 chr11:67122416-67122916 ( 60) TTTATTTATTTATTTT 1 chr16:30642248-30642748 ( 59) TTTATTTATTTATTTT 1 chr1:160300123-160300623 ( 21) TTTATTTATTTATTTT 1 chr20:3554070-3554570 ( 68) TTTATTTATTTATTTT 1 chr17:63254826-63255326 ( 66) TTTATTTATTTATTTT 1 chr19:16590837-16591337 ( 11) TTTATTTATTTATTTT 1 chr14:89905950-89906450 ( 22) TTTATTTATTTATTTT 1 chr5:137302360-137302860 ( 19) TTTATTTATTTATTTT 1 chr1:55074408-55074908 ( 27) TTTATTTATTTATTTT 1 chr12:109939461-10993996 ( 21) TTTATTTATTTATTTT 1 chr3:9938922-9939422 ( 18) TTTATTTATTTATTTT 1 chr10:91406948-91407448 ( 67) TTTATTTATTTATTTT 1 chr18:65998902-65999402 ( 58) TTTATTTATTTATTTT 1 chr6:108155273-108155773 ( 19) TTTATTTATTTATTTT 1 chr7:43965384-43965884 ( 34) TTTATTTATTTATTTT 1 chr10:119534029-11953452 ( 27) TTTATTTATTTATTTT 1 chr19:37160115-37160615 ( 28) TTTATTTATTTATTTT 1 chr5:36019525-36020025 ( 70) TTTATTTATTTATTTT 1 chr19:18106317-18106817 ( 55) TTTATTTATTTATTTT 1 chr17:32176313-32176813 ( 62) TTTATTTATTTATTTT 1 chr19:29505709-29506209 ( 18) TTTATTTATTTATTTT 1 chr6:27840523-27841023 ( 19) TTTATTTATTTATTTT 1 chr1:226747788-226748288 ( 22) TTTATTTATTTATTTT 1 chr7:158785209-158785709 ( 17) TTTATTTATTTATTTT 1 chr10:103359447-10335994 ( 8) TTTATTTATTTATTTT 1 chr5:115311219-115311719 ( 66) TTTATTTATTTATTTT 1 chr10:88419780-88420280 ( 31) TTTATTTATTTATTTT 1 chr7:139835818-139836318 ( 17) TTTATTTATTTATTTT 1 chr10:116657070-11665757 ( 23) TTTATTTATTTATTTT 1 chr1:50882378-50882878 ( 23) TTTATTTATTTATTTA 1 chr19:34234635-34235135 ( 60) TTTATTTATTTATTTA 1 chr5:32367212-32367712 ( 32) TTTATTTATTTATTTA 1 chr12:689840-690340 ( 59) TTTATTTATTTATTTA 1 chr2:128227807-128228307 ( 63) TTTATTTATTTATTTA 1 chr6:96811614-96812114 ( 63) TTTATTTATTTATTTA 1 chr11:123279166-12327966 ( 64) TTTATTTATTTATTTA 1 chr19:35461732-35462232 ( 8) TTTATTTATTTATTTA 1 chr11:47519256-47519756 ( 24) TTTATTTATTTATTTA 1 chr7:94942582-94943082 ( 60) TTTATTTATTTATTTA 1 chr9:132357696-132358196 ( 58) TTTATTTATTTATTTA 1 chr1:237000143-237000643 ( 59) TTTATTTATTTATTTA 1 chr10:25876829-25877329 ( 55) TTTATTTATTTATTTA 1 chr1:51493308-51493808 ( 21) TTTATTTATTTATTTA 1 chr12:57207020-57207520 ( 82) TTTATTTATTTATTTA 1 chr10:17584323-17584823 ( 2) TTTATTTATTTATTTA 1 chr1:67536893-67537393 ( 22) TTTATTTATTTATTTA 1 chr5:59594053-59594553 ( 72) TTTATTTATTTATTTG 1 chr18:2565841-2566341 ( 5) TTTATTTATTTATTTG 1 chr1:202829207-202829707 ( 54) TTTATTTATTTATTTG 1 chr16:30499824-30500324 ( 65) TTTATTTATTTATTTG 1 chr9:135985094-135985594 ( 20) TTTATTTATTTATTAT 1 chr3:181267272-181267772 ( 51) TTTATTTATTTATTAT 1 chr14:102623099-10262359 ( 77) TTTATTTATTTATTAT 1 chr7:98598795-98599295 ( 26) TTTATTTATTTATTAT 1 chr9:125282798-125283298 ( 63) TTTATTTATTTATGTT 1 chr1:230796106-230796606 ( 21) TTTATTTATTTATATT 1 chr12:53550115-53550615 ( 57) TTTATTTATTTATATT 1 chr12:57075164-57075664 ( 24) TTTATTTATTTATATT 1 chr1:35380066-35380566 ( 65) TTTATTTATTTTTTTG 1 chr9:130700096-130700596 ( 66) TTTATTTATTTTTTTG 1 chr1:27181866-27182366 ( 61) TTTATTTATTTATTGA 1 chr19:32398352-32398852 ( 27) TTTATTTATTTATTGA 1 chr7:118054048-118054548 ( 23) TTTATTTATTTATTGA 1 chr5:14858483-14858983 ( 31) TTTATTTATTTATTGA 1 chr17:32325925-32326425 ( 21) TTTATTTATTTATTGA 1 chr22:40158119-40158619 ( 20) TTTATTTATTTATTGA 1 chr12:54882532-54883032 ( 78) TTTATTTATTTTTGTT 1 chr1:109801176-109801676 ( 63) TTTATTTATTTATTTC 1 chr7:134894869-134895369 ( 25) TTTATTTATTTATTTC 1 chr20:2579148-2579648 ( 69) TTTATTTATTTTTATT 1 chr18:49439792-49440292 ( 17) TTTATTTATTTATTGG 1 chrX:72209974-72210474 ( 24) TTTATTTATTTTTTAA 1 chrX:24143940-24144440 ( 64) TTTATTTATTTTTTGA 1 chr5:36643783-36644283 ( 27) TTTATTTATTTTTTGA 1 chr3:181531705-181532205 ( 47) TTTATTTATTTATTCA 1 chr1:225654676-225655176 ( 46) TTTATTTATTTTTTAG 1 chr5:78762706-78763206 ( 68) TTTATTTATTTGTTTT 1 chr1:155225053-155225553 ( 59) TTTATTTATTTACTTA 1 chr1:148409484-148409984 ( 63) TTTATTTATTTTTCTT 1 chrX:63439525-63440025 ( 24) TTTATTTATTTTCTTT 1 chr18:49506383-49506883 ( 24) TTTATTTATTTTCTTT 1 chr1:223186742-223187242 ( 65) TTTATTTATTTATAGA 1 chr10:86796249-86796749 ( 71) TTTATTTATTTTTAGT 1 chr19:34214054-34214554 ( 63) TTTATTTATTTATGAG 1 chr5:92610361-92610861 ( 34) TTTATTTATTTTATTA 1 chr19:40795139-40795639 ( 59) TTTATTTATTTAAATT 1 chr17:42789440-42789940 ( 21) TTTATTTATTTTTAGA 1 chr5:43014458-43014958 ( 26) TTTATTTATTTTTGCT 1 chr19:38065756-38066256 ( 63) TTTATTTATTTTTGAG 1 chr1:155575570-155576070 ( 59) TTTATTTATTTTTGAG 1 chr12:56219791-56220291 ( 23) TTTATTTATTTTTGAG 1 chr10:101751758-10175225 ( 11) TTTATTTATTTTTGAG 1 chr15:75217542-75218042 ( 44) TTTATTTATTTTTGAG 1 chr19:38766241-38766741 ( 23) TTTATTTATTTTTGAG 1 chr9:137038377-137038877 ( 27) TTTATTTATTTTTGAG 1 chr19:33122838-33123338 ( 31) TTTATTTATTTTTGAG 1 chr10:101947571-10194807 ( 21) TTTATTTATTTTTGAG 1 chr1:245044260-245044760 ( 46) TTTATTTATTTTTGAG 1 chr13:100861667-10086216 ( 63) TTTATTTATTTTTGCT 1 chr1:61235261-61235761 ( 47) TTTTTTTATTTTTTAT 1 chr13:44823503-44824003 ( 62) TTTATTTATATTTTTT 1 chr17:64607776-64608276 ( 18) TTTATTTATTTATGAC 1 chr1:19187815-19188315 ( 8) TTTATTTAATTTTTTG 1 chr5:118933655-118934155 ( 20) TTTATTTATTTAGGTC 1 chr19:43709348-43709848 ( 65) TTTATTTATTTCGTTA 1 chr13:33246971-33247471 ( 25) TTTATTTATTTATCCG 1 chr10:72580222-72580722 ( 61) TTTATTTATTTTGAGA 1 chr5:32157863-32158363 ( 24) TTTATTTATTTTGAGA 1 chr1:36158803-36159303 ( 60) TTTATTTATTTTGAGA 1 chr1:155489566-155490066 ( 25) TTTATTTATTTTGAGA 1 chr3:172143685-172144185 ( 19) TTTATTTATTTTGAGA 1 chr13:98580756-98581256 ( 68) TTTATTTATTTTGAGA 1 chr19:35964354-35964854 ( 63) TTTATTTATTTTGAGA 1 chr5:139370245-139370745 ( 54) TTTATTTATTTTCAAG 1 chr16:46492-46992 ( 27) TTTATTTATTTAAGAC 1 chr1:179877161-179877661 ( 17) TTTATTTTTTATTTTT 1 chr2:212228586-212229086 ( 51) TTTATTTTTTTTCTGT 1 chr1:153904046-153904546 ( 29) TTTATTTATTTGAGAT 1 chr18:49863855-49864355 ( 9) TTTTTTTAATTATCTT 1 chr19:40301085-40301585 ( 61) TTTATTTATTCTTGAG 1 chr1:223840853-223841353 ( 34) TTTTTGTATTTTTTAG 1 chr2:131083643-131084143 ( 66) TTTATTTATTTTCCCA 1 chr6:28898029-28898529 ( 52) TTTTTGTATTTTTAGT 1 chr17:64667732-64668232 ( 67) TTTTTGTATTTTTAGT 1 chr19:50136745-50137245 ( 42) TTTTTTTTTTTAAGTT 1 chr4:78704311-78704811 ( 24) TTTATTTATTTCACTC 1 chr17:43576038-43576538 ( 75) TTTATTTATTGAGACA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 10.4753 E= 1.8e-764 -1406 -1406 -1406 205 -1406 -1406 -1406 205 -1406 -1406 -1406 205 200 -1406 -1406 -278 -1406 -1406 -1406 205 -1406 -1406 -388 203 -1406 -1406 -1406 205 203 -1406 -1406 -378 -437 -1406 -1406 203 -536 -1406 -1406 204 -536 -546 -546 203 158 -447 -447 9 -278 -288 -214 185 -112 -314 -107 161 -78 -288 -101 153 -1 -288 -88 128 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 171 E= 1.8e-764 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.964912 0.000000 0.000000 0.035088 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.017544 0.982456 0.000000 0.000000 0.000000 1.000000 0.982456 0.000000 0.000000 0.017544 0.011696 0.000000 0.000000 0.988304 0.005848 0.000000 0.000000 0.994152 0.005848 0.005848 0.005848 0.982456 0.719298 0.011696 0.011696 0.257310 0.035088 0.035088 0.058480 0.871345 0.111111 0.029240 0.122807 0.736842 0.140351 0.035088 0.128655 0.695906 0.239766 0.035088 0.140351 0.584795 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTT MEME-2 regular expression -------------------------------------------------------------------------------- TTTATTTATTT[AT]TTT[TA] -------------------------------------------------------------------------------- Time 726.67 secs. ******************************************************************************** ******************************************************************************** MOTIF AAATAAATAAAWAAAWDWADWW MEME-3 width = 22 sites = 150 llr = 2418 E-value = 1.9e-507 ******************************************************************************** -------------------------------------------------------------------------------- Motif AAATAAATAAAWAAAWDWADWW MEME-3 Description -------------------------------------------------------------------------------- Simplified A aaa:aaa:a9845555445444 pos.-specific C ::::::::::::1111211112 probability G ::::::::::112221212222 matrix T :::a:::a::152223242223 bits 2.1 ***** ** 1.8 ********* 1.6 ********** 1.4 ********** Relative 1.2 ********** Entropy 1.0 *********** (23.3 bits) 0.8 *********** 0.6 ************ 0.4 ************ * 0.2 **************** ***** 0.0 ---------------------- Multilevel AAATAAATAAATAAAAAAAAAA consensus ATTTTGTGTTT sequence G T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATAAATAAAWAAAWDWADWW MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr7:84738536-84739036 + 56 5.07e-14 ataaataaat aaataaataaataaaaataaaa ataaaataaa chr11:123279166-12327966 - 8 3.59e-13 TAAATAAATT AAATAAATAAATAAAATAAAAA TAAAATA chr12:122512978-12251347 + 55 1.40e-12 ataaataaat aaataaataaataaaataaaat aaaaataaaa chr5:14858483-14858983 + 68 1.40e-12 ataaataaat aaataaataaaataaaataaaa tatatgcaca chr11:67122416-67122916 - 17 2.06e-12 ATAAATAAAT AAATAAATAAAAATAAATAAAA AATAGGCCAT chr1:51493308-51493808 + 58 2.06e-12 ataaataaat aaataaataaataaaAATAAAG CTCTATTCTT chr17:9255303-9255803 + 61 3.72e-12 atatataaat aaataaataaataaataaataa atGAAAATGA chr5:32282198-32282698 + 59 6.99e-12 ataaataaat aaataaataaaataaaaaataa aAATCATCAT chr19:46532338-46532838 - 7 6.99e-12 ATAAATAAAT AAATAAATAAAATAAAGTAAAA AATCAC chr18:2565841-2566341 + 59 9.67e-12 taaaataaac aaataaataaaaataagtaaaa aaGACAATGC chr9:125282798-125283298 - 20 9.67e-12 ATAAATAAAT AAATAAATAAAAATAAAAATAA ACTTTAAGTA chr6:27840523-27841023 + 56 9.67e-12 ataaataaat aaataaataaataaaATGAAAA TAAAACCAAA chr5:127023497-127023997 + 73 1.33e-11 ataaataaat aaataaataaaaataaaaaata aaAAAA chr1:55074408-55074908 + 64 1.33e-11 ataaataaat aaataaataaaaataaaaaata aTACTTGGTC chr7:43965384-43965884 + 71 1.33e-11 ataaataaat aaataaataaataataaataaa GGGGAGGT chr12:32017172-32017672 - 19 3.07e-11 ATAAATAAAT AAATAAATAAAATAAATAATAA ATAAATAAAT chr5:175559043-175559543 - 22 3.07e-11 ATAAATAAAT AAATAAATAAATTTAAAAAAAT TACATATACA chr10:103359447-10335994 + 45 3.07e-11 ataaataaat aaataaataaaaagaaaagaaa gagaaagaag chr9:33474197-33474697 - 19 5.02e-11 ATAAATAAAT AAATAAATAAAAATAACTAAAT TACTTGAAAT chr3:194427434-194427934 + 37 6.50e-11 ataaataaat aaataaataaataaTTTtaaat taaaaaatag chr7:118054048-118054548 + 60 6.50e-11 ataaataaat aaataaataaataaagtaaaat aaaataaaaa chr5:115311219-115311719 - 23 6.50e-11 ATAAATAAAT AAATAAATAAATGAATAAATAA AATAAAATAA chr1:67698960-67699460 + 62 8.34e-11 ataaataaat aaataaataaaAATAAAAAGTA TCATTGTGCA chr12:689840-690340 - 16 8.34e-11 ATAAATAAAT AAATAAATAATAAAAAGAAAAA AGAAGTGATT chr19:35461732-35462232 + 45 8.34e-11 ataaataaat aaataaataaataaatatagtt gattttaaaa chr19:38766241-38766741 + 60 1.07e-10 ataaataaat aaataaataaaatcaaataaaa attatctatg chr6:138525309-138525809 + 56 1.34e-10 ataaataaat aaataaataaataaaAAGGGAA AGATGCAGTC chr5:95920040-95920540 - 29 1.34e-10 ATAAATAAAT AAATAAATAAATATTAAAAATT TAAAAATAAA chr5:59594053-59594553 - 29 1.34e-10 ATAAATAAAT AAATAAATAAAATAAAAAAGTT ATGTGGGTGG chr10:114649181-11464968 + 56 1.67e-10 ataaataaat aaataaataaataaataaaggt gttgatatca chr1:155575570-155576070 - 16 2.07e-10 ATAAATAAAT AAATAAATAAAAATAAAATAAG ACAAAAATAA chr6:108155273-108155773 + 56 2.07e-10 ataaataaat aaataaataaataaGAGTAATT CAAGGCCTTG chr10:88419780-88420280 + 68 2.07e-10 ataaataaat aaataaataaatgaatgaataa ataaataaat chr15:101945846-10194634 - 19 2.55e-10 ATAAATAAAT AAATAAATAAAATAAATTATTT AAAAATCGGC chr12:123312986-12331348 + 52 3.13e-10 ataaataaat aaataaataaataaataaTTTT TAAAAAAGAC chrX:72209974-72210474 + 61 3.13e-10 ataaataaat aaataaataaatggaaaaaaga tatacagatg chr19:40103557-40104057 + 57 3.85e-10 ataaataaat aaataaataaaaagaaagaaac taaaaatttc chr9:135985094-135985594 + 57 3.85e-10 ataaataaat aaataaataaataaatGCTAAA GCCTATTAGG chr7:139835818-139836318 + 54 3.85e-10 ataaataaat aaataaataaataaaatactta ggaacatacc chrX:24143940-24144440 - 21 5.72e-10 ATAAATAAAT AAATAAATAAAAACAAAAAACT AAAAATATGA chr10:35197186-35197686 - 20 6.90e-10 ATAAATAAAT AAATAAATAAAGTAAAATGAAA TAAAATTTAT chr17:63254826-63255326 - 23 1.18e-09 ATAAATAAAT AAATAAATAAAAAATAACTATT CCCAATCCTA chr9:130700096-130700596 - 23 1.18e-09 ATAAATAAAT AAATAAATAAAATAAAGACAGA GGCCAGGCAT chr20:2579148-2579648 - 26 1.40e-09 ATAAATAAAT AAATAAATAAAAAATAAATCTT GGCCTGACAA chr1:230796106-230796606 + 58 1.65e-09 ataaataaat aaataaataataaaATTAAATT AAATTAAAAT chr10:119534029-11953452 + 64 1.65e-09 ataaataaat aaataaataaataaaAAAggcc aggcactgtg chr17:38667040-38667540 + 37 1.95e-09 ataaataaat aaataaataaataatagtacct acctcatgtt chr12:57258084-57258584 - 16 1.95e-09 ATAAATAAAT AAATAAATAAAATAGCATAAAT GAATTAAGGA chr18:49506383-49506883 + 62 2.28e-09 taaaatatat aaataaataaattgaaagacat cccatgctca chr14:89905950-89906450 + 59 2.28e-09 ataaataaat aaataaataaattaaaggtaac tttCCCCATC chr3:181267272-181267772 - 8 2.67e-09 ATAAATAAAT AAATAAATAAAAAGAGAAGAGA ATGGAAG chr3:172143685-172144185 + 56 2.67e-09 ataaataaat aaataaataaataGTAAATGAG GCTCATTCgt chr1:160300123-160300623 + 58 2.67e-09 ataaataaat aaataaataaatagaaggatca aactcctaaa chr13:98580756-98581256 - 25 2.67e-09 ATAAATAAAT AAATAAATAATAAAAACAGGAA ATTAGGACAC chr1:226747788-226748288 + 59 2.67e-09 ataaataaat aaataaataaaAATAAAGAGTG AAAGGTGAGG chr11:118577953-11857845 + 48 3.11e-09 ataaataaat aaataaataaataaaGTGGATA GTAACATACA chr17:64607776-64608276 + 55 3.60e-09 ataaataaat aaataaataaataaatCTGCTT ATAGAGTCAT chr5:92610361-92610861 + 71 3.60e-09 ataaataaat aaataaataaatagaatggcaa ttattaca chr2:131083643-131084143 - 23 3.60e-09 ATAAATAAAT AAATAAATAAATACAGGAAATT GCAAAAGGAC chr19:43709348-43709848 - 22 4.17e-09 ATAAATAAAT AAATAAATAAACAAAAGAATAG TCAGGTGTGG chr1:35380066-35380566 - 21 4.80e-09 TAAAATAAAT AAATAAATAATAAAAACCAATT TTTCAAACTG chr10:97421658-97422158 + 35 5.52e-09 ataaataaat aaataaataaataaatCTCAGG TAGATATTCA chr18:65998902-65999402 - 15 5.52e-09 ATAAATAAAT AAATAAATAAAAATATGTGTCA GGTTCTTGAT chr19:37160115-37160615 + 65 5.52e-09 ataaataaat aaataaataactagaaaaagaa gagcaaaaga chr22:40158119-40158619 + 57 6.33e-09 ataaataaat aaataaataaataaagagggag ttgagggaga chr1:67536893-67537393 + 59 6.33e-09 ataaataaat aaataaataaaAAGTTGTAAGG GATTAAGCAA chr17:19255214-19255714 - 12 7.24e-09 ATAAATAAAT AAATAAATAAAGTAAATGAAGA AACTCAAGCA chr12:42215704-42216204 + 60 7.24e-09 ataaataaat aaataaataaataaaGCTACTG TACATTTACT chr1:100011455-100011955 - 17 7.24e-09 ATAAATAAAT AAATAAATAATAAAATGTTTTA AAAGACAAGA chr3:181531705-181532205 - 4 7.24e-09 ATAAATAAAT AAATAAATAAATGAACATTTTT GTG chr12:54882532-54883032 - 35 8.24e-09 ATAAATAAAT AAATAAATAAATATTGATGACA TCTATATACC chr1:240620625-240621125 - 25 8.24e-09 ATAAATAAAT AAATAAATAAAATAAAAGGCCA GGCGCAGTGG chr19:16590837-16591337 + 48 8.24e-09 ataaataaat aaataaataaaGCTATTAAAAA AACACCCATG chr10:29813595-29814095 + 60 1.06e-08 ataaataaat aaataaataaaAGAATTAGCGA TCATAGGTGC chr16:30499824-30500324 - 22 1.06e-08 ATAAATAAAT AAATAAATAATATAAAATAGGC CAGGAGCGAT chr1:109801176-109801676 - 20 1.20e-08 ATAAATAAAT AAATAAATAAAAGGTTATCTAA TGCATTTAGT chr1:50882378-50882878 + 60 1.35e-08 ataaataaat aaataaataaatGTGTATGTAT GTATGTATGT chr5:137302360-137302860 + 56 1.35e-08 ataaataaat aaataaataaatCAGTTTTAGA TGCCATTAAA chr16:30642248-30642748 - 16 1.52e-08 ATAAATAAAT AAATAAATAAATATTACAGGCT GGGCGCGGTG chr20:3554070-3554570 - 25 1.52e-08 ATAAATAAAT AAATAAATAAAAATCTGTAATC TAAGTTCCAG chr13:100861667-10086216 - 20 1.52e-08 ATAAATAAAT AAATAAATAAATGGGACTACAT CAAACTAACA chr11:32925263-32925763 - 21 1.70e-08 ATAAATAAAT AAATAAATAAAAAAGCGATGTA TCAACATTCC chr5:36643783-36644283 + 64 1.91e-08 ataaataaat aaataaataaatTGCAATGTGA ATAATGAAAC chr5:87284798-87285298 - 26 1.91e-08 ATAAATAAAT AAATAAATAAATGGTACCATTA TCTCCGCAGC chr17:43576038-43576538 - 32 1.91e-08 ATAAATAAAT AAATAAATAATAAAAAACCTAC CATTTCCAAG chr18:48717181-48717681 + 58 2.13e-08 ataaataaat aaataaataaTAAGAATTTTGT CCCTCCCTCT chr5:138866049-138866549 - 15 2.13e-08 ATAAATAAAT AAATAAATAAATGAGTTACAAC AGAATCTACA chr18:49439792-49440292 + 54 2.37e-08 ataaataaat aaataaataaaACATGATATGC TCAATATTTT chr10:72580222-72580722 - 17 2.64e-08 TTAATTAAAT AAATAAATAAATCAGCAAAAGC TTGGATGAAA chr1:237000143-237000643 - 16 2.64e-08 ATAAATAAAT AAATAAATAAATTGTTGTTGTT AAGGGGTGGA chr19:35964354-35964854 - 20 2.64e-08 ATAAATAAAT AAATAAATGAATAAAAATAAGG CCAGGCGCGG chr5:118933655-118934155 + 57 2.64e-08 ataaataaat aaataaataaaaataacctcca agaacaagta chrX:63439525-63440025 + 61 2.93e-08 ataaataaat aaataaataaatcagggcagaa ctaaataaac chr17:42789440-42789940 + 58 2.93e-08 ataaataaat aaataaataaataGAGAGGCAG AGCAggctag chr15:71084215-71084715 - 23 3.24e-08 ATAAATAAAT AAATAAATAAATATTCTAGTGT TCCAAGTTGG chr15:70865878-70866378 - 28 3.59e-08 ATAAATAAAT AAATAAATAAATACTTTACATG TACCAGAACT chr9:137038377-137038877 + 64 3.96e-08 ataaataaat aaataaataaaAAGAGATCCCT GATTAATAAC chr19:32398352-32398852 + 64 4.36e-08 ataaataaat aaataaataaaAGAAGTTTGGC GACCATTGCA chr1:113113291-113113791 - 27 4.79e-08 ATAAATAAAT AAATAAATAAATGACTTCTTAT TTTTCTGGTT chr3:9938922-9939422 + 55 4.79e-08 ataaataaat aaataaataaaAGGTCTGTAAa atctaattgt chr10:91406948-91407448 - 20 5.26e-08 ATAAATAAAT AAATAAATAAATTTAGCCAGGT GTGGTGGTGG chr1:202829207-202829707 - 11 5.26e-08 ATAAATAAAT AAATAAATAATTCTTTCTATAT TCTGGATACC chr17:32176313-32176813 - 19 5.26e-08 ATAAATAAAT AAATAAATAAAACTGAGACTTT TCAAGCAGCA chr6:30162702-30163202 + 66 5.77e-08 ataaataaat aaataaataaaATAGTCCAGTG TTACCCGAAC chr1:155489566-155490066 + 62 5.77e-08 ataaataaat aaataaataaCAATATGGTAAA CATCCAATTG chr5:139489855-139490355 - 19 5.77e-08 ATAAATAAAT AAATAAATAAATGGTAGATCTC TGCACCCGGC chr5:109425484-109425984 - 6 5.77e-08 ATAAATAAAT AAATAAATAAAGTGAAAGTGGA CTTGC chr4:78704311-78704811 + 61 6.31e-08 ataaataaat aaataaataagtgttagacaaa aacagcttca chr18:23654060-23654560 + 56 6.90e-08 ataaataaat aaataaataaatCCAAGTCTGg actggacacg chr5:126819225-126819725 - 23 6.90e-08 ATAAATAAAT AAATAAATAATATGTAAAGTCT CTTTCAGCCA chr13:44823503-44824003 - 19 6.90e-08 ATAAATAAAT AAATAAATAAAACTGTGAGGAG ATGGGTTTAC chr19:34234635-34235135 - 17 7.53e-08 ATAAATAAAT AAATAAATAACTTGTAGAAACA AGGTCTCCCT chr10:116657070-11665757 + 60 8.20e-08 ataaataaat aaataaataaatCACGTACAAC TAGATACTGG chr13:33246971-33247471 + 63 8.92e-08 ataaataaat aaataaataaaACGGCTGGAAA AAAGTCCAGA chr17:32325925-32326425 + 58 9.70e-08 ataaataaat aaataaataataaaGGCAAGCT CCTTGGAGAG chr1:19187815-19188315 + 45 1.05e-07 ataaataaat aaataaataaaACCTCCTGGAA TAGAAGAAAC chr19:29505709-29506209 + 55 1.05e-07 ataaataaat aaataaataaaAGTTTGGACTC CCTAAGTGAG chr5:177345510-177346010 - 17 1.14e-07 ATAAATAAAT AAATAAATAAATGCATGCCATG GCTGCTGCGA chr12:109939461-10993996 + 58 1.14e-07 ataaataaat aaataaataaatcagccaggca tggtagcatg chr7:134894869-134895369 + 62 1.14e-07 ataaataaat aaataaataaTTGGCACAATTT TTAAAGATTC chr19:40567075-40567575 + 60 1.23e-07 ataaataaat aaataaataaaGTCTTAAAGTC CTGGGTGGGG chr19:33122838-33123338 + 68 1.23e-07 ataaataaat aaataaataaatagctgggcac ggtggctcac chr19:40301085-40301585 - 18 1.68e-07 ATAAATAAAT AAATAAATAAAAGCCTCTCAAG GTTATGAAGC chr5:36019525-36020025 - 23 1.68e-07 ATAAATAAAT AAATAAATAATAGATGTTGGCA TGGATGTGAT chr7:158785209-158785709 + 54 2.39e-07 ataaataaat aaataaataaatCACCTCCAGT GTCAGGACTA chrUn_KI270467v1:2926-34 - 68 3.34e-07 AAAGGACACA AAATAAATATTATATACTGTAC ATAAAATATC chr19:18106317-18106817 - 12 3.34e-07 ATAAATAAAT AAATAAATAAGAAGGGCCAAGT GCGGTGGCTC chr16:21572322-21572822 + 59 3.56e-07 ataaataaat aaataaataagtccacaatgag gtatcacgtc chr5:132992494-132992994 - 20 3.56e-07 ATAAATAAAT AAATAAATAAAAGTCCTGAGGG GACTCTGAAA chr1:165854377-165854877 + 58 3.79e-07 ataaataaat aaataaataaaGTGAGTGTGTC TTTTGGATCT chr1:155225053-155225553 - 16 3.79e-07 ATAAATAAAT AAATAAATAATTGTGTTCGGAG TCAGCATCAT chr1:153904046-153904546 + 66 4.82e-07 ataaataaat aaataaataTTAGCTTGTATAT GTATAAAGAA chr11:47519256-47519756 + 61 4.82e-07 ataaataaat aaataaataaGGTACTTCAATT ATCATGCTTT chr16:46492-46992 + 65 5.73e-07 ataaataaat aaataaataGTATCTTATACAT TTAAAGCAAC chr5:32367212-32367712 + 70 5.73e-07 ataaataaat aaataaataactcactgtagcc ttgacctcc chr19:38065756-38066256 - 20 5.73e-07 ATAAATAAAT AAATAAATAAGAGATCAAGCCC GGGCAACAGA chr7:98598795-98599295 + 63 6.06e-07 ataaataaat aaataaataagggagagttcca caacttagct chr12:56219791-56220291 + 60 7.51e-07 ataaataaat aaataaataTGAAAGGATACTG AATACTGTTA chr10:101751758-10175225 + 48 8.77e-07 ataaataaat aaataaatgaaaatgttctgga attaaataat chr18:49514946-49515446 - 21 1.17e-06 ATAAATAAAT AAATAAATAAGCTTGCATTTGA GTTTGTCTGA chr5:43014458-43014958 + 64 1.29e-06 ataaataaat aaataTATATAGTTTAGCAAAA TTCACAAATT chr1:27181866-27182366 - 18 1.34e-06 ATAAATAAAT AAATAAATCAATCCTTTCATGA CTTACACAGA chr10:101947571-10194807 + 58 1.34e-06 ataaataaat aaataaataGACcctatatagt agcaaagttt chr12:57075164-57075664 + 61 1.41e-06 ataaataaat aaataaataGTTGGgagccaag atcacaccac chrUn_KI270467v1:1948-24 - 3 1.81e-06 AAAGTTGCCC AAATATATATTATATACTGTAC AT chrUn_KI270466v1:125-625 - 7 1.81e-06 AAAATATCCA AAATATATATTATATACTGTAC ATAAAA chr15:75217542-75218042 - 1 1.81e-06 ATAAATAAAT AAATAAATAACCCAGTCTCAGG chr1:148409484-148409984 - 20 1.89e-06 ATAAATAAAT AAATAAATAAGCAGCCATCACG AAAATAAAGG chrUn_KI270467v1:3129-36 - 32 2.57e-06 AAAGTACCCA AAATATATATTGTAAACTGTAC ATAAAATATC chr12:57207020-57207520 + 56 2.96e-06 ataaataaat aaataaatagagactcggtctc taaataaata -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATAAATAAAWAAAWDWADWW MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:84738536-84739036 5.1e-14 55_[+3]_23 chr11:123279166-12327966 3.6e-13 7_[-3]_71 chr12:122512978-12251347 1.4e-12 54_[+3]_24 chr5:14858483-14858983 1.4e-12 67_[+3]_11 chr11:67122416-67122916 2.1e-12 16_[-3]_62 chr1:51493308-51493808 2.1e-12 57_[+3]_21 chr17:9255303-9255803 3.7e-12 60_[+3]_18 chr5:32282198-32282698 7e-12 58_[+3]_20 chr19:46532338-46532838 7e-12 6_[-3]_72 chr18:2565841-2566341 9.7e-12 58_[+3]_20 chr9:125282798-125283298 9.7e-12 19_[-3]_59 chr6:27840523-27841023 9.7e-12 55_[+3]_23 chr5:127023497-127023997 1.3e-11 72_[+3]_6 chr1:55074408-55074908 1.3e-11 63_[+3]_15 chr7:43965384-43965884 1.3e-11 70_[+3]_8 chr12:32017172-32017672 3.1e-11 18_[-3]_60 chr5:175559043-175559543 3.1e-11 21_[-3]_57 chr10:103359447-10335994 3.1e-11 44_[+3]_34 chr9:33474197-33474697 5e-11 18_[-3]_60 chr3:194427434-194427934 6.5e-11 36_[+3]_42 chr7:118054048-118054548 6.5e-11 59_[+3]_19 chr5:115311219-115311719 6.5e-11 22_[-3]_56 chr1:67698960-67699460 8.3e-11 61_[+3]_17 chr12:689840-690340 8.3e-11 15_[-3]_63 chr19:35461732-35462232 8.3e-11 44_[+3]_34 chr19:38766241-38766741 1.1e-10 59_[+3]_19 chr6:138525309-138525809 1.3e-10 55_[+3]_23 chr5:95920040-95920540 1.3e-10 28_[-3]_50 chr5:59594053-59594553 1.3e-10 28_[-3]_50 chr10:114649181-11464968 1.7e-10 55_[+3]_23 chr1:155575570-155576070 2.1e-10 15_[-3]_63 chr6:108155273-108155773 2.1e-10 55_[+3]_23 chr10:88419780-88420280 2.1e-10 67_[+3]_11 chr15:101945846-10194634 2.5e-10 18_[-3]_60 chr12:123312986-12331348 3.1e-10 51_[+3]_27 chrX:72209974-72210474 3.1e-10 60_[+3]_18 chr19:40103557-40104057 3.9e-10 56_[+3]_22 chr9:135985094-135985594 3.9e-10 56_[+3]_22 chr7:139835818-139836318 3.9e-10 53_[+3]_25 chrX:24143940-24144440 5.7e-10 20_[-3]_58 chr10:35197186-35197686 6.9e-10 19_[-3]_59 chr17:63254826-63255326 1.2e-09 22_[-3]_56 chr9:130700096-130700596 1.2e-09 22_[-3]_56 chr20:2579148-2579648 1.4e-09 25_[-3]_53 chr1:230796106-230796606 1.7e-09 57_[+3]_21 chr10:119534029-11953452 1.7e-09 63_[+3]_15 chr17:38667040-38667540 1.9e-09 36_[+3]_42 chr12:57258084-57258584 1.9e-09 15_[-3]_63 chr18:49506383-49506883 2.3e-09 61_[+3]_17 chr14:89905950-89906450 2.3e-09 58_[+3]_20 chr3:181267272-181267772 2.7e-09 7_[-3]_71 chr3:172143685-172144185 2.7e-09 55_[+3]_23 chr1:160300123-160300623 2.7e-09 57_[+3]_21 chr13:98580756-98581256 2.7e-09 24_[-3]_54 chr1:226747788-226748288 2.7e-09 58_[+3]_20 chr11:118577953-11857845 3.1e-09 47_[+3]_31 chr17:64607776-64608276 3.6e-09 54_[+3]_24 chr5:92610361-92610861 3.6e-09 70_[+3]_8 chr2:131083643-131084143 3.6e-09 22_[-3]_56 chr19:43709348-43709848 4.2e-09 21_[-3]_57 chr1:35380066-35380566 4.8e-09 20_[-3]_58 chr10:97421658-97422158 5.5e-09 34_[+3]_44 chr18:65998902-65999402 5.5e-09 14_[-3]_64 chr19:37160115-37160615 5.5e-09 64_[+3]_14 chr22:40158119-40158619 6.3e-09 56_[+3]_22 chr1:67536893-67537393 6.3e-09 58_[+3]_20 chr17:19255214-19255714 7.2e-09 11_[-3]_67 chr12:42215704-42216204 7.2e-09 59_[+3]_19 chr1:100011455-100011955 7.2e-09 16_[-3]_62 chr3:181531705-181532205 7.2e-09 3_[-3]_75 chr12:54882532-54883032 8.2e-09 34_[-3]_44 chr1:240620625-240621125 8.2e-09 24_[-3]_54 chr19:16590837-16591337 8.2e-09 47_[+3]_31 chr10:29813595-29814095 1.1e-08 59_[+3]_19 chr16:30499824-30500324 1.1e-08 21_[-3]_57 chr1:109801176-109801676 1.2e-08 19_[-3]_59 chr1:50882378-50882878 1.4e-08 59_[+3]_19 chr5:137302360-137302860 1.4e-08 55_[+3]_23 chr16:30642248-30642748 1.5e-08 15_[-3]_63 chr20:3554070-3554570 1.5e-08 24_[-3]_54 chr13:100861667-10086216 1.5e-08 19_[-3]_59 chr11:32925263-32925763 1.7e-08 20_[-3]_58 chr5:36643783-36644283 1.9e-08 63_[+3]_15 chr5:87284798-87285298 1.9e-08 25_[-3]_53 chr17:43576038-43576538 1.9e-08 31_[-3]_47 chr18:48717181-48717681 2.1e-08 57_[+3]_21 chr5:138866049-138866549 2.1e-08 14_[-3]_64 chr18:49439792-49440292 2.4e-08 53_[+3]_25 chr10:72580222-72580722 2.6e-08 16_[-3]_62 chr1:237000143-237000643 2.6e-08 15_[-3]_63 chr19:35964354-35964854 2.6e-08 19_[-3]_59 chr5:118933655-118934155 2.6e-08 56_[+3]_22 chrX:63439525-63440025 2.9e-08 60_[+3]_18 chr17:42789440-42789940 2.9e-08 57_[+3]_21 chr15:71084215-71084715 3.2e-08 22_[-3]_56 chr15:70865878-70866378 3.6e-08 27_[-3]_51 chr9:137038377-137038877 4e-08 63_[+3]_15 chr19:32398352-32398852 4.4e-08 63_[+3]_15 chr1:113113291-113113791 4.8e-08 26_[-3]_52 chr3:9938922-9939422 4.8e-08 54_[+3]_24 chr10:91406948-91407448 5.3e-08 19_[-3]_59 chr1:202829207-202829707 5.3e-08 10_[-3]_68 chr17:32176313-32176813 5.3e-08 18_[-3]_60 chr6:30162702-30163202 5.8e-08 65_[+3]_13 chr1:155489566-155490066 5.8e-08 61_[+3]_17 chr5:139489855-139490355 5.8e-08 18_[-3]_60 chr5:109425484-109425984 5.8e-08 5_[-3]_73 chr4:78704311-78704811 6.3e-08 60_[+3]_18 chr18:23654060-23654560 6.9e-08 55_[+3]_23 chr5:126819225-126819725 6.9e-08 22_[-3]_56 chr13:44823503-44824003 6.9e-08 18_[-3]_60 chr19:34234635-34235135 7.5e-08 16_[-3]_62 chr10:116657070-11665757 8.2e-08 59_[+3]_19 chr13:33246971-33247471 8.9e-08 62_[+3]_16 chr17:32325925-32326425 9.7e-08 57_[+3]_21 chr1:19187815-19188315 1.1e-07 44_[+3]_34 chr19:29505709-29506209 1.1e-07 54_[+3]_24 chr5:177345510-177346010 1.1e-07 16_[-3]_62 chr12:109939461-10993996 1.1e-07 57_[+3]_21 chr7:134894869-134895369 1.1e-07 61_[+3]_17 chr19:40567075-40567575 1.2e-07 59_[+3]_19 chr19:33122838-33123338 1.2e-07 67_[+3]_11 chr19:40301085-40301585 1.7e-07 17_[-3]_61 chr5:36019525-36020025 1.7e-07 22_[-3]_56 chr7:158785209-158785709 2.4e-07 53_[+3]_25 chrUn_KI270467v1:2926-34 3.3e-07 67_[-3]_11 chr19:18106317-18106817 3.3e-07 11_[-3]_67 chr16:21572322-21572822 3.6e-07 58_[+3]_20 chr5:132992494-132992994 3.6e-07 19_[-3]_59 chr1:165854377-165854877 3.8e-07 57_[+3]_21 chr1:155225053-155225553 3.8e-07 15_[-3]_63 chr1:153904046-153904546 4.8e-07 65_[+3]_13 chr11:47519256-47519756 4.8e-07 60_[+3]_18 chr16:46492-46992 5.7e-07 64_[+3]_14 chr5:32367212-32367712 5.7e-07 69_[+3]_9 chr19:38065756-38066256 5.7e-07 19_[-3]_59 chr7:98598795-98599295 6.1e-07 62_[+3]_16 chr12:56219791-56220291 7.5e-07 59_[+3]_19 chr10:101751758-10175225 8.8e-07 47_[+3]_31 chr18:49514946-49515446 1.2e-06 20_[-3]_58 chr5:43014458-43014958 1.3e-06 63_[+3]_15 chr1:27181866-27182366 1.3e-06 17_[-3]_61 chr10:101947571-10194807 1.3e-06 57_[+3]_21 chr12:57075164-57075664 1.4e-06 60_[+3]_18 chrUn_KI270467v1:1948-24 1.8e-06 2_[-3]_76 chrUn_KI270466v1:125-625 1.8e-06 6_[-3]_72 chr15:75217542-75218042 1.8e-06 [-3]_78 chr1:148409484-148409984 1.9e-06 19_[-3]_59 chrUn_KI270467v1:3129-36 2.6e-06 31_[-3]_47 chr12:57207020-57207520 3e-06 55_[+3]_23 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATAAATAAAWAAAWDWADWW MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AAATAAATAAAWAAAWDWADWW width=22 seqs=150 chr7:84738536-84739036 ( 56) AAATAAATAAATAAAAATAAAA 1 chr11:123279166-12327966 ( 8) AAATAAATAAATAAAATAAAAA 1 chr12:122512978-12251347 ( 55) AAATAAATAAATAAAATAAAAT 1 chr5:14858483-14858983 ( 68) AAATAAATAAAATAAAATAAAA 1 chr11:67122416-67122916 ( 17) AAATAAATAAAAATAAATAAAA 1 chr1:51493308-51493808 ( 58) AAATAAATAAATAAAAATAAAG 1 chr17:9255303-9255803 ( 61) AAATAAATAAATAAATAAATAA 1 chr5:32282198-32282698 ( 59) AAATAAATAAAATAAAAAATAA 1 chr19:46532338-46532838 ( 7) AAATAAATAAAATAAAGTAAAA 1 chr18:2565841-2566341 ( 59) AAATAAATAAAAATAAGTAAAA 1 chr9:125282798-125283298 ( 20) AAATAAATAAAAATAAAAATAA 1 chr6:27840523-27841023 ( 56) AAATAAATAAATAAAATGAAAA 1 chr5:127023497-127023997 ( 73) AAATAAATAAAAATAAAAAATA 1 chr1:55074408-55074908 ( 64) AAATAAATAAAAATAAAAAATA 1 chr7:43965384-43965884 ( 71) AAATAAATAAATAATAAATAAA 1 chr12:32017172-32017672 ( 19) AAATAAATAAAATAAATAATAA 1 chr5:175559043-175559543 ( 22) AAATAAATAAATTTAAAAAAAT 1 chr10:103359447-10335994 ( 45) AAATAAATAAAAAGAAAAGAAA 1 chr9:33474197-33474697 ( 19) AAATAAATAAAAATAACTAAAT 1 chr3:194427434-194427934 ( 37) AAATAAATAAATAATTTTAAAT 1 chr7:118054048-118054548 ( 60) AAATAAATAAATAAAGTAAAAT 1 chr5:115311219-115311719 ( 23) AAATAAATAAATGAATAAATAA 1 chr1:67698960-67699460 ( 62) AAATAAATAAAAATAAAAAGTA 1 chr12:689840-690340 ( 16) AAATAAATAATAAAAAGAAAAA 1 chr19:35461732-35462232 ( 45) AAATAAATAAATAAATATAGTT 1 chr19:38766241-38766741 ( 60) AAATAAATAAAATCAAATAAAA 1 chr6:138525309-138525809 ( 56) AAATAAATAAATAAAAAGGGAA 1 chr5:95920040-95920540 ( 29) AAATAAATAAATATTAAAAATT 1 chr5:59594053-59594553 ( 29) AAATAAATAAAATAAAAAAGTT 1 chr10:114649181-11464968 ( 56) AAATAAATAAATAAATAAAGGT 1 chr1:155575570-155576070 ( 16) AAATAAATAAAAATAAAATAAG 1 chr6:108155273-108155773 ( 56) AAATAAATAAATAAGAGTAATT 1 chr10:88419780-88420280 ( 68) AAATAAATAAATGAATGAATAA 1 chr15:101945846-10194634 ( 19) AAATAAATAAAATAAATTATTT 1 chr12:123312986-12331348 ( 52) AAATAAATAAATAAATAATTTT 1 chrX:72209974-72210474 ( 61) AAATAAATAAATGGAAAAAAGA 1 chr19:40103557-40104057 ( 57) AAATAAATAAAAAGAAAGAAAC 1 chr9:135985094-135985594 ( 57) AAATAAATAAATAAATGCTAAA 1 chr7:139835818-139836318 ( 54) AAATAAATAAATAAAATACTTA 1 chrX:24143940-24144440 ( 21) AAATAAATAAAAACAAAAAACT 1 chr10:35197186-35197686 ( 20) AAATAAATAAAGTAAAATGAAA 1 chr17:63254826-63255326 ( 23) AAATAAATAAAAAATAACTATT 1 chr9:130700096-130700596 ( 23) AAATAAATAAAATAAAGACAGA 1 chr20:2579148-2579648 ( 26) AAATAAATAAAAAATAAATCTT 1 chr1:230796106-230796606 ( 58) AAATAAATAATAAAATTAAATT 1 chr10:119534029-11953452 ( 64) AAATAAATAAATAAAAAAGGCC 1 chr17:38667040-38667540 ( 37) AAATAAATAAATAATAGTACCT 1 chr12:57258084-57258584 ( 16) AAATAAATAAAATAGCATAAAT 1 chr18:49506383-49506883 ( 62) AAATAAATAAATTGAAAGACAT 1 chr14:89905950-89906450 ( 59) AAATAAATAAATTAAAGGTAAC 1 chr3:181267272-181267772 ( 8) AAATAAATAAAAAGAGAAGAGA 1 chr3:172143685-172144185 ( 56) AAATAAATAAATAGTAAATGAG 1 chr1:160300123-160300623 ( 58) AAATAAATAAATAGAAGGATCA 1 chr13:98580756-98581256 ( 25) AAATAAATAATAAAAACAGGAA 1 chr1:226747788-226748288 ( 59) AAATAAATAAAAATAAAGAGTG 1 chr11:118577953-11857845 ( 48) AAATAAATAAATAAAGTGGATA 1 chr17:64607776-64608276 ( 55) AAATAAATAAATAAATCTGCTT 1 chr5:92610361-92610861 ( 71) AAATAAATAAATAGAATGGCAA 1 chr2:131083643-131084143 ( 23) AAATAAATAAATACAGGAAATT 1 chr19:43709348-43709848 ( 22) AAATAAATAAACAAAAGAATAG 1 chr1:35380066-35380566 ( 21) AAATAAATAATAAAAACCAATT 1 chr10:97421658-97422158 ( 35) AAATAAATAAATAAATCTCAGG 1 chr18:65998902-65999402 ( 15) AAATAAATAAAAATATGTGTCA 1 chr19:37160115-37160615 ( 65) AAATAAATAACTAGAAAAAGAA 1 chr22:40158119-40158619 ( 57) AAATAAATAAATAAAGAGGGAG 1 chr1:67536893-67537393 ( 59) AAATAAATAAAAAGTTGTAAGG 1 chr17:19255214-19255714 ( 12) AAATAAATAAAGTAAATGAAGA 1 chr12:42215704-42216204 ( 60) AAATAAATAAATAAAGCTACTG 1 chr1:100011455-100011955 ( 17) AAATAAATAATAAAATGTTTTA 1 chr3:181531705-181532205 ( 4) AAATAAATAAATGAACATTTTT 1 chr12:54882532-54883032 ( 35) AAATAAATAAATATTGATGACA 1 chr1:240620625-240621125 ( 25) AAATAAATAAAATAAAAGGCCA 1 chr19:16590837-16591337 ( 48) AAATAAATAAAGCTATTAAAAA 1 chr10:29813595-29814095 ( 60) AAATAAATAAAAGAATTAGCGA 1 chr16:30499824-30500324 ( 22) AAATAAATAATATAAAATAGGC 1 chr1:109801176-109801676 ( 20) AAATAAATAAAAGGTTATCTAA 1 chr1:50882378-50882878 ( 60) AAATAAATAAATGTGTATGTAT 1 chr5:137302360-137302860 ( 56) AAATAAATAAATCAGTTTTAGA 1 chr16:30642248-30642748 ( 16) AAATAAATAAATATTACAGGCT 1 chr20:3554070-3554570 ( 25) AAATAAATAAAAATCTGTAATC 1 chr13:100861667-10086216 ( 20) AAATAAATAAATGGGACTACAT 1 chr11:32925263-32925763 ( 21) AAATAAATAAAAAAGCGATGTA 1 chr5:36643783-36644283 ( 64) AAATAAATAAATTGCAATGTGA 1 chr5:87284798-87285298 ( 26) AAATAAATAAATGGTACCATTA 1 chr17:43576038-43576538 ( 32) AAATAAATAATAAAAAACCTAC 1 chr18:48717181-48717681 ( 58) AAATAAATAATAAGAATTTTGT 1 chr5:138866049-138866549 ( 15) AAATAAATAAATGAGTTACAAC 1 chr18:49439792-49440292 ( 54) AAATAAATAAAACATGATATGC 1 chr10:72580222-72580722 ( 17) AAATAAATAAATCAGCAAAAGC 1 chr1:237000143-237000643 ( 16) AAATAAATAAATTGTTGTTGTT 1 chr19:35964354-35964854 ( 20) AAATAAATGAATAAAAATAAGG 1 chr5:118933655-118934155 ( 57) AAATAAATAAAAATAACCTCCA 1 chrX:63439525-63440025 ( 61) AAATAAATAAATCAGGGCAGAA 1 chr17:42789440-42789940 ( 58) AAATAAATAAATAGAGAGGCAG 1 chr15:71084215-71084715 ( 23) AAATAAATAAATATTCTAGTGT 1 chr15:70865878-70866378 ( 28) AAATAAATAAATACTTTACATG 1 chr9:137038377-137038877 ( 64) AAATAAATAAAAAGAGATCCCT 1 chr19:32398352-32398852 ( 64) AAATAAATAAAAGAAGTTTGGC 1 chr1:113113291-113113791 ( 27) AAATAAATAAATGACTTCTTAT 1 chr3:9938922-9939422 ( 55) AAATAAATAAAAGGTCTGTAAA 1 chr10:91406948-91407448 ( 20) AAATAAATAAATTTAGCCAGGT 1 chr1:202829207-202829707 ( 11) AAATAAATAATTCTTTCTATAT 1 chr17:32176313-32176813 ( 19) AAATAAATAAAACTGAGACTTT 1 chr6:30162702-30163202 ( 66) AAATAAATAAAATAGTCCAGTG 1 chr1:155489566-155490066 ( 62) AAATAAATAACAATATGGTAAA 1 chr5:139489855-139490355 ( 19) AAATAAATAAATGGTAGATCTC 1 chr5:109425484-109425984 ( 6) AAATAAATAAAGTGAAAGTGGA 1 chr4:78704311-78704811 ( 61) AAATAAATAAGTGTTAGACAAA 1 chr18:23654060-23654560 ( 56) AAATAAATAAATCCAAGTCTGG 1 chr5:126819225-126819725 ( 23) AAATAAATAATATGTAAAGTCT 1 chr13:44823503-44824003 ( 19) AAATAAATAAAACTGTGAGGAG 1 chr19:34234635-34235135 ( 17) AAATAAATAACTTGTAGAAACA 1 chr10:116657070-11665757 ( 60) AAATAAATAAATCACGTACAAC 1 chr13:33246971-33247471 ( 63) AAATAAATAAAACGGCTGGAAA 1 chr17:32325925-32326425 ( 58) AAATAAATAATAAAGGCAAGCT 1 chr1:19187815-19188315 ( 45) AAATAAATAAAACCTCCTGGAA 1 chr19:29505709-29506209 ( 55) AAATAAATAAAAGTTTGGACTC 1 chr5:177345510-177346010 ( 17) AAATAAATAAATGCATGCCATG 1 chr12:109939461-10993996 ( 58) AAATAAATAAATCAGCCAGGCA 1 chr7:134894869-134895369 ( 62) AAATAAATAATTGGCACAATTT 1 chr19:40567075-40567575 ( 60) AAATAAATAAAGTCTTAAAGTC 1 chr19:33122838-33123338 ( 68) AAATAAATAAATAGCTGGGCAC 1 chr19:40301085-40301585 ( 18) AAATAAATAAAAGCCTCTCAAG 1 chr5:36019525-36020025 ( 23) AAATAAATAATAGATGTTGGCA 1 chr7:158785209-158785709 ( 54) AAATAAATAAATCACCTCCAGT 1 chrUn_KI270467v1:2926-34 ( 68) AAATAAATATTATATACTGTAC 1 chr19:18106317-18106817 ( 12) AAATAAATAAGAAGGGCCAAGT 1 chr16:21572322-21572822 ( 59) AAATAAATAAGTCCACAATGAG 1 chr5:132992494-132992994 ( 20) AAATAAATAAAAGTCCTGAGGG 1 chr1:165854377-165854877 ( 58) AAATAAATAAAGTGAGTGTGTC 1 chr1:155225053-155225553 ( 16) AAATAAATAATTGTGTTCGGAG 1 chr1:153904046-153904546 ( 66) AAATAAATATTAGCTTGTATAT 1 chr11:47519256-47519756 ( 61) AAATAAATAAGGTACTTCAATT 1 chr16:46492-46992 ( 65) AAATAAATAGTATCTTATACAT 1 chr5:32367212-32367712 ( 70) AAATAAATAACTCACTGTAGCC 1 chr19:38065756-38066256 ( 20) AAATAAATAAGAGATCAAGCCC 1 chr7:98598795-98599295 ( 63) AAATAAATAAGGGAGAGTTCCA 1 chr12:56219791-56220291 ( 60) AAATAAATATGAAAGGATACTG 1 chr10:101751758-10175225 ( 48) AAATAAATGAAAATGTTCTGGA 1 chr18:49514946-49515446 ( 21) AAATAAATAAGCTTGCATTTGA 1 chr5:43014458-43014958 ( 64) AAATATATATAGTTTAGCAAAA 1 chr1:27181866-27182366 ( 18) AAATAAATCAATCCTTTCATGA 1 chr10:101947571-10194807 ( 58) AAATAAATAGACCCTATATAGT 1 chr12:57075164-57075664 ( 61) AAATAAATAGTTGGGAGCCAAG 1 chrUn_KI270467v1:1948-24 ( 3) AAATATATATTATATACTGTAC 1 chrUn_KI270466v1:125-625 ( 7) AAATATATATTATATACTGTAC 1 chr15:75217542-75218042 ( 1) AAATAAATAACCCAGTCTCAGG 1 chr1:148409484-148409984 ( 20) AAATAAATAAGCAGCCATCACG 1 chrUn_KI270467v1:3129-36 ( 32) AAATATATATTGTAAACTGTAC 1 chr12:57207020-57207520 ( 56) AAATAAATAGAGACTCGGTCTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATAAATAAAWAAAWDWADWW MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 10.5498 E= 1.9e-507 205 -1387 -1387 -1387 205 -1387 -1387 -1387 205 -1387 -1387 -1387 -1387 -1387 -1387 205 205 -1387 -1387 -1387 201 -1387 -1387 -318 205 -1387 -1387 -1387 -1387 -1387 -1387 205 202 -527 -428 -1387 194 -1387 -328 -237 167 -296 -211 -79 84 -296 -182 93 99 -103 -58 -13 103 -137 -37 -22 113 -169 -75 -1 103 -128 -103 18 68 -69 -15 -13 63 -103 -82 55 99 -111 -28 -37 80 -96 -28 -5 87 -103 -47 3 73 -75 -69 25 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATAAATAAAWAAAWDWADWW MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 150 E= 1.9e-507 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.973333 0.000000 0.000000 0.026667 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.980000 0.006667 0.013333 0.000000 0.926667 0.000000 0.026667 0.046667 0.766667 0.033333 0.060000 0.140000 0.433333 0.033333 0.073333 0.460000 0.480000 0.126667 0.173333 0.220000 0.493333 0.100000 0.200000 0.206667 0.526667 0.080000 0.153333 0.240000 0.493333 0.106667 0.126667 0.273333 0.386667 0.160000 0.233333 0.220000 0.373333 0.126667 0.146667 0.353333 0.480000 0.120000 0.213333 0.186667 0.420000 0.133333 0.213333 0.233333 0.440000 0.126667 0.186667 0.246667 0.400000 0.153333 0.160000 0.286667 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AAATAAATAAAWAAAWDWADWW MEME-3 regular expression -------------------------------------------------------------------------------- AAATAAATAAA[TA][AT][ATG][AT][AT][AGT][AT][AG][ATG][AT][AT] -------------------------------------------------------------------------------- Time 1036.04 secs. ******************************************************************************** ******************************************************************************** MOTIF YRGAGTCTCRCTCTGT MEME-4 width = 16 sites = 93 llr = 1179 E-value = 8.5e-148 ******************************************************************************** -------------------------------------------------------------------------------- Motif YRGAGTCTCRCTCTGT MEME-4 Description -------------------------------------------------------------------------------- Simplified A :5:71::::4:::::: pos.-specific C 6111::8:7:9:8::: probability G 14829:::151:1:82 matrix T 41:1:92a21:a1928 bits 2.1 1.8 * * 1.6 * * * 1.4 ** * ** * * Relative 1.2 ** * ** * * Entropy 1.0 * **** ****** (18.3 bits) 0.8 ****** ****** 0.6 * ************** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel CAGAGTCTCGCTCTGT consensus TG A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YRGAGTCTCRCTCTGT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr19:34234635-34235135 + 84 2.48e-10 tatttGgagc cagagtctcgctctgt c chr1:155225053-155225553 + 81 2.48e-10 cttattgaga cagagtctcgctctgt agcc chr4:190111855-190112355 - 31 2.48e-10 TATTTTGAGA CAGAGTCTCGCTCTGT CGCCCAGGCT chr1:35380066-35380566 + 84 2.48e-10 ttttttgaga cagagtctcgctctgt c chr19:40301085-40301585 + 78 2.48e-10 attcttgaga cagagtctcgctctgt cgcccag chr5:78762706-78763206 - 6 2.48e-10 ATTTTTGAGA CAGAGTCTCGCTCTGT CACTG chr5:139370245-139370745 + 71 7.44e-10 atttTCAaga cagagtctcactctgt caccaaggct chr13:33246971-33247471 - 6 7.44e-10 TTATCCGAGA CAGAGTCTCACTCTGT CACCC chr2:131083643-131084143 + 84 7.44e-10 tttTCCCaga cggagtctcgctctgt c chr1:245044260-245044760 + 63 9.92e-10 atttttgaga cggagtctcactctgt cgcccaggct chr1:225654676-225655176 - 29 1.68e-09 ATTTTTTAGA TGGAGTCTCGCTCTGT CACCTAGGCT chr11:47519256-47519756 - 4 1.68e-09 TATTTAGAGA TGGAGTCTCGCTCTGT CAC chr13:98580756-98581256 + 84 1.68e-09 tattttgaga tggagtctcgctctgt t chr1:202829207-202829707 + 79 1.68e-09 Gtttttgaga tggagtctcgctctgt tgccag chr5:132992494-132992994 + 85 1.91e-09 ttttttgaga tggagtctcactctgt chr7:43965384-43965884 - 14 1.91e-09 TATTTTGAGA TGGAGTCTCACTCTGT CCCCAGGCTG chr10:114649181-11464968 - 1 2.15e-09 TTTATTTTGA CAGAGTCTTGCTCTGT chr1:50882378-50882878 - 4 2.15e-09 TTATTTAAGA CAGAGTCTTGCTCTGT TGT chr17:32176313-32176813 + 82 2.15e-09 tattttgaga cagagtcttgctctgt cgc chr1:226747788-226748288 - 1 2.15e-09 ATTTTTGAGA CAGAGTCTTGCTCTGT chr5:32282198-32282698 - 3 6.29e-09 TTATTTTAGA TGGAGTCTTGCTCTGT CG chr17:9255303-9255803 - 4 6.29e-09 TATTTTGAGA TGGAGTCTTGCTCTGT TGC chr12:57075164-57075664 - 4 6.29e-09 TATATTGAAA TGGAGTCTTGCTCTGT CGC chrX:45011533-45012033 + 75 8.68e-09 ttttttgaga cagggtctcactctgt tgcccaggct chr12:32017172-32017672 + 82 8.68e-09 tatttTCaga cagggtctcactctgt ttg chr12:56219791-56220291 - 6 8.68e-09 ATTTTTGAGA CAGGGTCTCACTCTGT CACCC chr11:67122416-67122916 + 82 8.68e-09 ttttttgaga cagagtctggctctgt tgc chr12:42215704-42216204 - 1 3.39e-08 TTTTTTGAGC TGGAATCTCGCTCTGT chr16:30499824-30500324 + 84 4.44e-08 ttatttgaga cagagtctcgctctat c chr10:29813595-29814095 - 2 8.54e-08 ATTTTTGAGA TGGAGCCTCACTCTGT C chr16:21572322-21572822 - 1 1.06e-07 ATTTTTGAGA TGGAGTCTTTCTCTGT chr1:67536893-67537393 - 2 1.22e-07 TATTTAGAGA CACGGTCTCACTCTGT C chr1:36158803-36159303 + 76 1.34e-07 tattttgaga cagagtcttgctcttg tcacccagg chr5:139489855-139490355 + 83 1.48e-07 atttttgaga tggagttttgctcttt tt chr5:14858483-14858983 - 13 1.64e-07 TTTATTGAGA TGGATTCTCACTCTGT TGCCCAGGCT chr12:689840-690340 + 82 1.84e-07 ttatttgaga cggagtttcactcttg ttg chr5:177345510-177346010 + 80 1.84e-07 tattttttga gacagtctcgctctgt cgccc chr9:130700096-130700596 + 85 1.84e-07 ttttttgaga cggagtttcactcttg chr1:55074408-55074908 - 6 2.07e-07 ATTTTTGAGA CAGGGTCTCACTTTGT CTTCC chr22:40158119-40158619 - 1 2.30e-07 TTATTGAAGA TGGAGTTTCGCTCTTG chr19:18106317-18106817 + 76 2.30e-07 atttttgaga tggagtttcgctcttg tttcccagg chr1:27181866-27182366 + 79 2.56e-07 tttattgaga tggagtttcactcttg tggccc chrX:24143940-24144440 + 82 2.56e-07 ttttttgaga cagggtctcattctgt ctc chr5:32367212-32367712 - 4 2.56e-07 ATTTTTGAGA TGGAGTTTCACTCTTG TCG chr12:57258084-57258584 + 79 2.56e-07 tattttgaga tggagtcttgctctat caccca chr7:118054048-118054548 - 5 2.56e-07 TTTATTGAGA TGGAGTTTCACTCTTG TTGC chr9:125282798-125283298 + 84 2.56e-07 atgtttgaga gggagttttgctctgt c chr18:65998902-65999402 + 80 2.56e-07 ttttttgaga tggagtttcactcttg ttgcc chr3:172143685-172144185 - 3 3.56e-07 TATTTTGAGA TGGAGGCTCACTCTGT CA chr1:67698960-67699460 - 4 5.36e-07 ATTTTTGAGA CCGAGTCTCCCTCTGT CGC chr5:127023497-127023997 - 14 5.36e-07 TTTTTTGAGA CAGAATCTCGCTATGT CACCCAGGCT chr19:32398352-32398852 - 9 5.36e-07 TTTATTGAGA CAGGATTTCACTCTGT TTCCCAAA chr17:42789440-42789940 - 5 5.36e-07 TATTTTTAGA CAGAATCTCACTCTTG TCGC chr19:40567075-40567575 - 4 5.90e-07 TTATTTTTGA GACAGTCTTGCTCTGT CGC chr7:94942582-94943082 - 2 5.90e-07 TTTATTGAGA GACAGTCTTGCTCTGT C chr19:38766241-38766741 - 6 7.25e-07 ATTTTTGAGA TGGAGTTCCACTCTGT CACCC chr5:36643783-36644283 - 9 7.94e-07 TTTTTTGAGA CGGAGTCTTGCCCTGT TGCCCAGG chr19:34214054-34214554 + 80 7.94e-07 atttatgaga cagggccttgctctgt cacct chr12:57207020-57207520 - 3 8.72e-07 TATTTAGAGA CCGAGTCTCACTCTCT CG chr6:28898029-28898529 + 73 9.68e-07 ttagtagaga cggggtttcactatgt tggtcaggct chr19:40795139-40795639 + 83 1.85e-06 ttttttgaga tggagtgtccctctgt tg chr19:38065756-38066256 + 80 2.24e-06 atttttgagg caacgtcttgctctgt tgcct chr3:18330704-18331204 - 19 2.24e-06 CGTACGCCCA CGGAGTCTCGCTGATT GCTAGCACAG chr7:76728589-76729089 + 64 2.24e-06 cctacgccca cagagtctcactgatt gctagcacag chr19:37160115-37160615 - 7 2.24e-06 ATTTTTGAGA CAGGTTCTGGCTCTGT TGCCCA chr4:78704311-78704811 - 2 2.43e-06 ACTCTGTCAC CCAGGTCTCACTCTGT C chrX:72209974-72210474 - 6 2.90e-06 TTTTTTAAGA GACAGTCTCGCTATGT TATTC chr10:72580222-72580722 + 77 3.17e-06 tattttgaga cagagtctcacattgt cacccagg chr18:49506383-49506883 - 1 3.17e-06 TTTTTTGAGA TGGAGTCTCGCTCCAT chr9:137038377-137038877 - 10 3.45e-06 ATTTTTGAGA CGTAGTTTCACTCTTG TTGCCCAGG chr19:35964354-35964854 + 79 3.75e-06 tattttgaga tggagtttcattcttg ttgccc chr15:75217542-75218042 + 61 4.08e-06 atttttgaga tgaagtctagctctgt cacccaggct chr19:33122838-33123338 - 14 4.45e-06 ATTTTTGAGA CAGCATCTCGCTTTGT CACCCAGGCT chr1:223186742-223187242 + 81 5.24e-06 tatttataga tagggactcactatgt tgcc chr9:33474197-33474697 + 81 6.70e-06 ttatttTTGG AGTagtcttgctctgt cgcc chr5:32172468-32172968 - 7 7.87e-06 GTTTTTGAGA CGGAGCCTCAGTTTGT CGCCCA chr7:149718934-149719434 + 69 8.53e-06 ctttcttctt ttgtgtctgtctctgt gtctcttctg chr5:36928849-36929349 - 18 1.07e-05 CACACTGGAA TACAGTTTGGCTGTTT CTTAAAAAGT chr13:44823503-44824003 + 83 1.07e-05 ttttttgata ccgagtctcacttcgt cg chr4:120256193-120256693 - 2 1.35e-05 CCTAAGCCCA CGGAGTCTCGCTGACT G chr10:116657070-11665757 - 3 1.35e-05 TATTTTGAGA CAGCGTTTCGGTCTTG TT chr6:169751197-169751697 + 56 1.57e-05 GGCCTCGCTT CTCCATCTCGCTCTGT TCTCCAAGAC chr19:36070333-36070833 + 60 1.57e-05 TGGCCTGCCT TTGTGACTCACTCTGG AGATCACCTT chr1:210236479-210236979 - 80 2.11e-05 GCCCC CACTATCTCATTCTGT GGTTTCAAGA chr10:3785798-3786298 + 12 2.11e-05 tcctccacct ccgggtccctctctgt ccccctccat chr4:20337292-20337792 - 36 2.62e-05 TGCTATTTGA TATGGTTTGGCTGTGT CCCCATCAAA chr2:128227807-128228307 - 4 5.93e-05 TTTATTTATT TTGAGACTGAGTCTGG CCC chr18:48023187-48023687 + 82 7.21e-05 ACCATTTGTC CAGTGACtgagtgtgt gtg chr3:194352568-194353068 + 19 7.21e-05 tgtgtgtgtg cagtgtgtgggtgtgt ggtgtgtgtg chr18:50374919-50375419 + 78 7.68e-05 GACTTGAGGT TGGAGTCTGTGTGTTG GGGACCC chr3:38138520-38139020 + 71 7.68e-05 GCGAGTGCGG CGCCGCCTGTCTCTGT TCTTGAACGT chr2:172098601-172099101 + 74 9.88e-05 ACAGTGTGCT CAGTGTGTGATTGTGT GTTTGCGCGC chr19:53537575-53538075 + 84 1.26e-04 AGGCGCACGT GTGTGTCGGGCTCTGT T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YRGAGTCTCRCTCTGT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:34234635-34235135 2.5e-10 83_[+4]_1 chr1:155225053-155225553 2.5e-10 80_[+4]_4 chr4:190111855-190112355 2.5e-10 30_[-4]_54 chr1:35380066-35380566 2.5e-10 83_[+4]_1 chr19:40301085-40301585 2.5e-10 77_[+4]_7 chr5:78762706-78763206 2.5e-10 5_[-4]_79 chr5:139370245-139370745 7.4e-10 70_[+4]_14 chr13:33246971-33247471 7.4e-10 5_[-4]_79 chr2:131083643-131084143 7.4e-10 83_[+4]_1 chr1:245044260-245044760 9.9e-10 62_[+4]_22 chr1:225654676-225655176 1.7e-09 28_[-4]_56 chr11:47519256-47519756 1.7e-09 3_[-4]_81 chr13:98580756-98581256 1.7e-09 83_[+4]_1 chr1:202829207-202829707 1.7e-09 78_[+4]_6 chr5:132992494-132992994 1.9e-09 84_[+4] chr7:43965384-43965884 1.9e-09 13_[-4]_71 chr10:114649181-11464968 2.1e-09 [-4]_84 chr1:50882378-50882878 2.1e-09 3_[-4]_81 chr17:32176313-32176813 2.1e-09 81_[+4]_3 chr1:226747788-226748288 2.1e-09 [-4]_84 chr5:32282198-32282698 6.3e-09 2_[-4]_82 chr17:9255303-9255803 6.3e-09 3_[-4]_81 chr12:57075164-57075664 6.3e-09 3_[-4]_81 chrX:45011533-45012033 8.7e-09 74_[+4]_10 chr12:32017172-32017672 8.7e-09 81_[+4]_3 chr12:56219791-56220291 8.7e-09 5_[-4]_79 chr11:67122416-67122916 8.7e-09 81_[+4]_3 chr12:42215704-42216204 3.4e-08 [-4]_84 chr16:30499824-30500324 4.4e-08 83_[+4]_1 chr10:29813595-29814095 8.5e-08 1_[-4]_83 chr16:21572322-21572822 1.1e-07 [-4]_84 chr1:67536893-67537393 1.2e-07 1_[-4]_83 chr1:36158803-36159303 1.3e-07 75_[+4]_9 chr5:139489855-139490355 1.5e-07 82_[+4]_2 chr5:14858483-14858983 1.6e-07 12_[-4]_72 chr12:689840-690340 1.8e-07 81_[+4]_3 chr5:177345510-177346010 1.8e-07 79_[+4]_5 chr9:130700096-130700596 1.8e-07 84_[+4] chr1:55074408-55074908 2.1e-07 5_[-4]_79 chr22:40158119-40158619 2.3e-07 [-4]_84 chr19:18106317-18106817 2.3e-07 75_[+4]_9 chr1:27181866-27182366 2.6e-07 78_[+4]_6 chrX:24143940-24144440 2.6e-07 81_[+4]_3 chr5:32367212-32367712 2.6e-07 3_[-4]_81 chr12:57258084-57258584 2.6e-07 78_[+4]_6 chr7:118054048-118054548 2.6e-07 4_[-4]_80 chr9:125282798-125283298 2.6e-07 83_[+4]_1 chr18:65998902-65999402 2.6e-07 79_[+4]_5 chr3:172143685-172144185 3.6e-07 2_[-4]_82 chr1:67698960-67699460 5.4e-07 3_[-4]_81 chr5:127023497-127023997 5.4e-07 13_[-4]_71 chr19:32398352-32398852 5.4e-07 8_[-4]_76 chr17:42789440-42789940 5.4e-07 4_[-4]_80 chr19:40567075-40567575 5.9e-07 3_[-4]_81 chr7:94942582-94943082 5.9e-07 1_[-4]_83 chr19:38766241-38766741 7.2e-07 5_[-4]_79 chr5:36643783-36644283 7.9e-07 8_[-4]_76 chr19:34214054-34214554 7.9e-07 79_[+4]_5 chr12:57207020-57207520 8.7e-07 2_[-4]_82 chr6:28898029-28898529 9.7e-07 72_[+4]_12 chr19:40795139-40795639 1.9e-06 82_[+4]_2 chr19:38065756-38066256 2.2e-06 79_[+4]_5 chr3:18330704-18331204 2.2e-06 18_[-4]_66 chr7:76728589-76729089 2.2e-06 63_[+4]_21 chr19:37160115-37160615 2.2e-06 6_[-4]_78 chr4:78704311-78704811 2.4e-06 1_[-4]_83 chrX:72209974-72210474 2.9e-06 5_[-4]_79 chr10:72580222-72580722 3.2e-06 76_[+4]_8 chr18:49506383-49506883 3.2e-06 [-4]_84 chr9:137038377-137038877 3.4e-06 9_[-4]_75 chr19:35964354-35964854 3.7e-06 78_[+4]_6 chr15:75217542-75218042 4.1e-06 60_[+4]_24 chr19:33122838-33123338 4.4e-06 13_[-4]_71 chr1:223186742-223187242 5.2e-06 80_[+4]_4 chr9:33474197-33474697 6.7e-06 80_[+4]_4 chr5:32172468-32172968 7.9e-06 6_[-4]_78 chr7:149718934-149719434 8.5e-06 68_[+4]_16 chr5:36928849-36929349 1.1e-05 17_[-4]_67 chr13:44823503-44824003 1.1e-05 82_[+4]_2 chr4:120256193-120256693 1.4e-05 1_[-4]_83 chr10:116657070-11665757 1.4e-05 2_[-4]_82 chr6:169751197-169751697 1.6e-05 55_[+4]_29 chr19:36070333-36070833 1.6e-05 59_[+4]_25 chr1:210236479-210236979 2.1e-05 79_[-4]_5 chr10:3785798-3786298 2.1e-05 11_[+4]_73 chr4:20337292-20337792 2.6e-05 35_[-4]_49 chr2:128227807-128228307 5.9e-05 3_[-4]_81 chr18:48023187-48023687 7.2e-05 81_[+4]_3 chr3:194352568-194353068 7.2e-05 18_[+4]_66 chr18:50374919-50375419 7.7e-05 77_[+4]_7 chr3:38138520-38139020 7.7e-05 70_[+4]_14 chr2:172098601-172099101 9.9e-05 73_[+4]_11 chr19:53537575-53538075 0.00013 83_[+4]_1 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YRGAGTCTCRCTCTGT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YRGAGTCTCRCTCTGT width=16 seqs=93 chr19:34234635-34235135 ( 84) CAGAGTCTCGCTCTGT 1 chr1:155225053-155225553 ( 81) CAGAGTCTCGCTCTGT 1 chr4:190111855-190112355 ( 31) CAGAGTCTCGCTCTGT 1 chr1:35380066-35380566 ( 84) CAGAGTCTCGCTCTGT 1 chr19:40301085-40301585 ( 78) CAGAGTCTCGCTCTGT 1 chr5:78762706-78763206 ( 6) CAGAGTCTCGCTCTGT 1 chr5:139370245-139370745 ( 71) CAGAGTCTCACTCTGT 1 chr13:33246971-33247471 ( 6) CAGAGTCTCACTCTGT 1 chr2:131083643-131084143 ( 84) CGGAGTCTCGCTCTGT 1 chr1:245044260-245044760 ( 63) CGGAGTCTCACTCTGT 1 chr1:225654676-225655176 ( 29) TGGAGTCTCGCTCTGT 1 chr11:47519256-47519756 ( 4) TGGAGTCTCGCTCTGT 1 chr13:98580756-98581256 ( 84) TGGAGTCTCGCTCTGT 1 chr1:202829207-202829707 ( 79) TGGAGTCTCGCTCTGT 1 chr5:132992494-132992994 ( 85) TGGAGTCTCACTCTGT 1 chr7:43965384-43965884 ( 14) TGGAGTCTCACTCTGT 1 chr10:114649181-11464968 ( 1) CAGAGTCTTGCTCTGT 1 chr1:50882378-50882878 ( 4) CAGAGTCTTGCTCTGT 1 chr17:32176313-32176813 ( 82) CAGAGTCTTGCTCTGT 1 chr1:226747788-226748288 ( 1) CAGAGTCTTGCTCTGT 1 chr5:32282198-32282698 ( 3) TGGAGTCTTGCTCTGT 1 chr17:9255303-9255803 ( 4) TGGAGTCTTGCTCTGT 1 chr12:57075164-57075664 ( 4) TGGAGTCTTGCTCTGT 1 chrX:45011533-45012033 ( 75) CAGGGTCTCACTCTGT 1 chr12:32017172-32017672 ( 82) CAGGGTCTCACTCTGT 1 chr12:56219791-56220291 ( 6) CAGGGTCTCACTCTGT 1 chr11:67122416-67122916 ( 82) CAGAGTCTGGCTCTGT 1 chr12:42215704-42216204 ( 1) TGGAATCTCGCTCTGT 1 chr16:30499824-30500324 ( 84) CAGAGTCTCGCTCTAT 1 chr10:29813595-29814095 ( 2) TGGAGCCTCACTCTGT 1 chr16:21572322-21572822 ( 1) TGGAGTCTTTCTCTGT 1 chr1:67536893-67537393 ( 2) CACGGTCTCACTCTGT 1 chr1:36158803-36159303 ( 76) CAGAGTCTTGCTCTTG 1 chr5:139489855-139490355 ( 83) TGGAGTTTTGCTCTTT 1 chr5:14858483-14858983 ( 13) TGGATTCTCACTCTGT 1 chr12:689840-690340 ( 82) CGGAGTTTCACTCTTG 1 chr5:177345510-177346010 ( 80) GACAGTCTCGCTCTGT 1 chr9:130700096-130700596 ( 85) CGGAGTTTCACTCTTG 1 chr1:55074408-55074908 ( 6) CAGGGTCTCACTTTGT 1 chr22:40158119-40158619 ( 1) TGGAGTTTCGCTCTTG 1 chr19:18106317-18106817 ( 76) TGGAGTTTCGCTCTTG 1 chr1:27181866-27182366 ( 79) TGGAGTTTCACTCTTG 1 chrX:24143940-24144440 ( 82) CAGGGTCTCATTCTGT 1 chr5:32367212-32367712 ( 4) TGGAGTTTCACTCTTG 1 chr12:57258084-57258584 ( 79) TGGAGTCTTGCTCTAT 1 chr7:118054048-118054548 ( 5) TGGAGTTTCACTCTTG 1 chr9:125282798-125283298 ( 84) GGGAGTTTTGCTCTGT 1 chr18:65998902-65999402 ( 80) TGGAGTTTCACTCTTG 1 chr3:172143685-172144185 ( 3) TGGAGGCTCACTCTGT 1 chr1:67698960-67699460 ( 4) CCGAGTCTCCCTCTGT 1 chr5:127023497-127023997 ( 14) CAGAATCTCGCTATGT 1 chr19:32398352-32398852 ( 9) CAGGATTTCACTCTGT 1 chr17:42789440-42789940 ( 5) CAGAATCTCACTCTTG 1 chr19:40567075-40567575 ( 4) GACAGTCTTGCTCTGT 1 chr7:94942582-94943082 ( 2) GACAGTCTTGCTCTGT 1 chr19:38766241-38766741 ( 6) TGGAGTTCCACTCTGT 1 chr5:36643783-36644283 ( 9) CGGAGTCTTGCCCTGT 1 chr19:34214054-34214554 ( 80) CAGGGCCTTGCTCTGT 1 chr12:57207020-57207520 ( 3) CCGAGTCTCACTCTCT 1 chr6:28898029-28898529 ( 73) CGGGGTTTCACTATGT 1 chr19:40795139-40795639 ( 83) TGGAGTGTCCCTCTGT 1 chr19:38065756-38066256 ( 80) CAACGTCTTGCTCTGT 1 chr3:18330704-18331204 ( 19) CGGAGTCTCGCTGATT 1 chr7:76728589-76729089 ( 64) CAGAGTCTCACTGATT 1 chr19:37160115-37160615 ( 7) CAGGTTCTGGCTCTGT 1 chr4:78704311-78704811 ( 2) CCAGGTCTCACTCTGT 1 chrX:72209974-72210474 ( 6) GACAGTCTCGCTATGT 1 chr10:72580222-72580722 ( 77) CAGAGTCTCACATTGT 1 chr18:49506383-49506883 ( 1) TGGAGTCTCGCTCCAT 1 chr9:137038377-137038877 ( 10) CGTAGTTTCACTCTTG 1 chr19:35964354-35964854 ( 79) TGGAGTTTCATTCTTG 1 chr15:75217542-75218042 ( 61) TGAAGTCTAGCTCTGT 1 chr19:33122838-33123338 ( 14) CAGCATCTCGCTTTGT 1 chr1:223186742-223187242 ( 81) TAGGGACTCACTATGT 1 chr9:33474197-33474697 ( 81) AGTAGTCTTGCTCTGT 1 chr5:32172468-32172968 ( 7) CGGAGCCTCAGTTTGT 1 chr7:149718934-149719434 ( 69) TTGTGTCTGTCTCTGT 1 chr5:36928849-36929349 ( 18) TACAGTTTGGCTGTTT 1 chr13:44823503-44824003 ( 83) CCGAGTCTCACTTCGT 1 chr4:120256193-120256693 ( 2) CGGAGTCTCGCTGACT 1 chr10:116657070-11665757 ( 3) CAGCGTTTCGGTCTTG 1 chr6:169751197-169751697 ( 56) CTCCATCTCGCTCTGT 1 chr19:36070333-36070833 ( 60) TTGTGACTCACTCTGG 1 chr1:210236479-210236979 ( 80) CACTATCTCATTCTGT 1 chr10:3785798-3786298 ( 12) CCGGGTCCCTCTCTGT 1 chr4:20337292-20337792 ( 36) TATGGTTTGGCTGTGT 1 chr2:128227807-128228307 ( 4) TTGAGACTGAGTCTGG 1 chr18:48023187-48023687 ( 82) CAGTGACTGAGTGTGT 1 chr3:194352568-194353068 ( 19) CAGTGTGTGGGTGTGT 1 chr18:50374919-50375419 ( 78) TGGAGTCTGTGTGTTG 1 chr3:38138520-38139020 ( 71) CGCCGCCTGTCTCTGT 1 chr2:172098601-172099101 ( 74) CAGTGTGTGATTGTGT 1 chr19:53537575-53538075 ( 84) GTGTGTCGGGCTCTGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YRGAGTCTCRCTCTGT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 8.71592 E= 8.5e-148 -448 111 -200 60 90 -227 77 -217 -290 -142 170 -290 158 -227 -78 -168 -168 -1318 180 -349 -249 -259 -458 190 -1318 158 -300 -32 -1318 -359 -458 200 -448 137 -100 -32 76 -359 100 -217 -1318 179 -200 -249 -448 -458 -1318 202 -249 164 -142 -217 -290 -359 -1318 197 -290 -359 154 -32 -1318 -1318 -59 178 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YRGAGTCTCRCTCTGT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 93 E= 8.5e-148 0.010753 0.559140 0.064516 0.365591 0.451613 0.053763 0.440860 0.053763 0.032258 0.096774 0.838710 0.032258 0.720430 0.053763 0.150538 0.075269 0.075269 0.000000 0.903226 0.021505 0.043011 0.043011 0.010753 0.903226 0.000000 0.774194 0.032258 0.193548 0.000000 0.021505 0.010753 0.967742 0.010753 0.666667 0.129032 0.193548 0.408602 0.021505 0.516129 0.053763 0.000000 0.892473 0.064516 0.043011 0.010753 0.010753 0.000000 0.978495 0.043011 0.806452 0.096774 0.053763 0.032258 0.021505 0.000000 0.946237 0.032258 0.021505 0.752688 0.193548 0.000000 0.000000 0.172043 0.827957 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YRGAGTCTCRCTCTGT MEME-4 regular expression -------------------------------------------------------------------------------- [CT][AG]GAGTCTC[GA]CTCTGT -------------------------------------------------------------------------------- Time 1340.18 secs. ******************************************************************************** ******************************************************************************** MOTIF GTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-5 width = 27 sites = 28 llr = 536 E-value = 1.4e-062 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-5 Description -------------------------------------------------------------------------------- Simplified A 1:::::::::::112:2::2:12:1:: pos.-specific C :121:::::11221:2:11:121:::1 probability G 916282929191718:728:8:72819 matrix T :82618:817:6:7:8:8:8:6:8:9: bits 2.1 1.8 1.6 1.4 * * * Relative 1.2 * ***** * * ** * ** Entropy 1.0 ** ***** * ** **** **** (27.6 bits) 0.8 ** ******* ******** **** 0.6 *************************** 0.4 *************************** 0.2 *************************** 0.0 --------------------------- Multilevel GTGTGTGTGTGTGTGTGTGTGTGTGTG consensus G CC CA CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------- chr1:156661319-156661819 + 43 5.65e-17 GTCCgtgtgt gtgtgtgtgtgtgtgtgtgtgtgtgtg tgtCCTATCC chr22:38179947-38180447 - 5 5.65e-17 TACTCTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTG TGTG chr2:241881328-241881828 + 71 5.65e-17 CCCAGCgtgt gtgtgtgtgtgtgtgtgtgtgtgtgtg tgt chr7:27168841-27169341 + 63 5.65e-17 gtgtgtgtgt gtgtgtgtgtgtgtgtgtgtgtgtgtg tgtTCCAGCC chr22:24010817-24011317 - 61 5.65e-17 GTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTG TTGCGGGAGT chr5:173892764-173893264 + 39 5.65e-17 AGCTCtgtgt gtgtgtgtgtgtgtgtgtgtgtgtgtg tgtgtgtgag chr3:11478773-11479273 - 22 5.65e-17 GTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTTGTAA chr22:35840406-35840906 + 22 1.56e-15 gtgtgcgtgt gtgcgtgtgtgtgtgtgtgtgtgtgtg tgtAGGGGGG chr1:167984953-167985453 + 34 3.95e-13 accacgtcgt gtgtgtgtgtgtgtgtgtgtgtgtggt gtgtgtgtgt chr13:114131482-11413198 - 27 4.51e-13 GTGTGCGCGC GTTTGTGTGTGTGCATGTGTGCGTGTG TGCTGGTGGG chr6:32583834-32584334 - 4 3.46e-12 TGAGCTGGGA ATCTGAGTGTGTGTGTGTGTGTGTGTG TGT chr6:31652055-31652555 - 61 4.99e-12 GTGTGTGTGT GTGTGTGTGTGTGTGTGTGTGTTTGGC TGTGGGTTAG chr18:63198056-63198556 - 25 2.41e-11 GTCAGTGTGT GTCTGTGTGTGTCTCTGTGTCTATGTG TGTCTCTGTG chr7:150359976-150360476 - 38 3.75e-11 TGGTGTTTGT GTGTGTGGTGGGCTGTGTGTGTGTGTG GTGTTTGTGT chr19:53554083-53554583 + 69 1.34e-08 TGCGTTGGGG GTCTGTGTGCGCGTACACGTGCATGTC GCGGT chr2:172098601-172099101 + 15 3.07e-08 GTGACTGTGA GAGTGTGTATCAGTATGGGTGAGTGTG TGCTAGTATA chr19:40090497-40090997 - 26 3.30e-08 ATCCCCAGGC GTGTGTGTGCGCGGGTATCAGAGGAGG GGGATTGTGA chr8:629129-629629 - 45 4.74e-08 TCAGCTCTGT GTGTGTGGGTGGTCACAGGAGAGTGTG AGTCAGCTCT chr3:194352568-194353068 + 49 7.25e-08 tgtgtggtga atgggtgggtgtgcgtgtgtgcagtag gtgtgagtgt chr19:34359200-34359700 - 29 1.17e-07 GCGCACGCGT GTGCGTGTGGGCCAGCACGTCCGGGTG GTCAGGACGC chr19:53537575-53538075 + 44 1.17e-07 ACGCACACGT GTCAGTGTGTCCGCGTGTCAGCATCTG TGCAGGCGCA chr10:102117603-10211810 + 68 2.42e-07 atgtgtgtat cttgtggtgcttctgcgtgtgcatgtg tgtggg chr19:40055768-40056268 - 39 6.93e-07 ATCCTTAGGC GTGCGTGTGCGCGGGCATCAAAGGATG GGGATTGCGC chr19:47229805-47230305 - 43 1.47e-06 GCCTGCGTGT GCTGGGGTGTGGAGGTTGTAGTGTGTG TGTGTTGCTG chr17:46225232-46225732 + 67 1.95e-06 GGATGCTGGT GCCTTGGCgtctctgtctctgtgtatc tcgttgt chr6:70177163-70177663 - 11 3.70e-06 GGCTTTGGGT GGTGTTGGGTGTCAGTAGATCTCGGTG GGTGACTGTG chr12:55972874-55973374 - 23 5.31e-06 ATGTATACGT GGTGTGTGTGGTATATGTGTGTATATG ATGTGTGTGT chr7:5425514-5426014 + 64 1.27e-05 GTGTCCGCGT TTGGAGCTGGGCGTGCGGGTCTCAGTG GCGGCCTCGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:156661319-156661819 5.7e-17 42_[+5]_31 chr22:38179947-38180447 5.7e-17 4_[-5]_69 chr2:241881328-241881828 5.7e-17 70_[+5]_3 chr7:27168841-27169341 5.7e-17 62_[+5]_11 chr22:24010817-24011317 5.7e-17 60_[-5]_13 chr5:173892764-173893264 5.7e-17 38_[+5]_35 chr3:11478773-11479273 5.7e-17 21_[-5]_52 chr22:35840406-35840906 1.6e-15 21_[+5]_52 chr1:167984953-167985453 4e-13 33_[+5]_40 chr13:114131482-11413198 4.5e-13 26_[-5]_47 chr6:32583834-32584334 3.5e-12 3_[-5]_70 chr6:31652055-31652555 5e-12 60_[-5]_13 chr18:63198056-63198556 2.4e-11 24_[-5]_49 chr7:150359976-150360476 3.7e-11 37_[-5]_36 chr19:53554083-53554583 1.3e-08 68_[+5]_5 chr2:172098601-172099101 3.1e-08 14_[+5]_59 chr19:40090497-40090997 3.3e-08 25_[-5]_48 chr8:629129-629629 4.7e-08 44_[-5]_29 chr3:194352568-194353068 7.2e-08 48_[+5]_25 chr19:34359200-34359700 1.2e-07 28_[-5]_45 chr19:53537575-53538075 1.2e-07 43_[+5]_30 chr10:102117603-10211810 2.4e-07 67_[+5]_6 chr19:40055768-40056268 6.9e-07 38_[-5]_35 chr19:47229805-47230305 1.5e-06 42_[-5]_31 chr17:46225232-46225732 1.9e-06 66_[+5]_7 chr6:70177163-70177663 3.7e-06 10_[-5]_63 chr12:55972874-55973374 5.3e-06 22_[-5]_51 chr7:5425514-5426014 1.3e-05 63_[+5]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTGTGTGTGTGTGTGTGTGTGTGTGTG width=27 seqs=28 chr1:156661319-156661819 ( 43) GTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr22:38179947-38180447 ( 5) GTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr2:241881328-241881828 ( 71) GTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr7:27168841-27169341 ( 63) GTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr22:24010817-24011317 ( 61) GTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr5:173892764-173893264 ( 39) GTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr3:11478773-11479273 ( 22) GTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr22:35840406-35840906 ( 22) GTGCGTGTGTGTGTGTGTGTGTGTGTG 1 chr1:167984953-167985453 ( 34) GTGTGTGTGTGTGTGTGTGTGTGTGGT 1 chr13:114131482-11413198 ( 27) GTTTGTGTGTGTGCATGTGTGCGTGTG 1 chr6:32583834-32584334 ( 4) ATCTGAGTGTGTGTGTGTGTGTGTGTG 1 chr6:31652055-31652555 ( 61) GTGTGTGTGTGTGTGTGTGTGTTTGGC 1 chr18:63198056-63198556 ( 25) GTCTGTGTGTGTCTCTGTGTCTATGTG 1 chr7:150359976-150360476 ( 38) GTGTGTGGTGGGCTGTGTGTGTGTGTG 1 chr19:53554083-53554583 ( 69) GTCTGTGTGCGCGTACACGTGCATGTC 1 chr2:172098601-172099101 ( 15) GAGTGTGTATCAGTATGGGTGAGTGTG 1 chr19:40090497-40090997 ( 26) GTGTGTGTGCGCGGGTATCAGAGGAGG 1 chr8:629129-629629 ( 45) GTGTGTGGGTGGTCACAGGAGAGTGTG 1 chr3:194352568-194353068 ( 49) ATGGGTGGGTGTGCGTGTGTGCAGTAG 1 chr19:34359200-34359700 ( 29) GTGCGTGTGGGCCAGCACGTCCGGGTG 1 chr19:53537575-53538075 ( 44) GTCAGTGTGTCCGCGTGTCAGCATCTG 1 chr10:102117603-10211810 ( 68) CTTGTGGTGCTTCTGCGTGTGCATGTG 1 chr19:40055768-40056268 ( 39) GTGCGTGTGCGCGGGCATCAAAGGATG 1 chr19:47229805-47230305 ( 43) GCTGGGGTGTGGAGGTTGTAGTGTGTG 1 chr17:46225232-46225732 ( 67) GCCTTGGCGTCTCTGTCTCTGTGTATC 1 chr6:70177163-70177663 ( 11) GGTGTTGGGTGTCAGTAGATCTCGGTG 1 chr12:55972874-55973374 ( 23) GGTGTGTGTGGTATATGTGTGTATATG 1 chr7:5425514-5426014 ( 64) TTGGAGCTGGGCGTGCGGGTCTCAGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 27 n= 44400 bayes= 11.236 E= 1.4e-062 -176 -285 173 -275 -275 -186 -186 177 -1145 -53 131 -43 -275 -127 -27 141 -275 -1145 167 -76 -275 -1145 -53 170 -1145 -285 184 -275 -1145 -285 -53 170 -275 -1145 179 -176 -1145 -86 -86 157 -1145 -127 173 -275 -275 -27 -127 141 -176 -27 139 -275 -176 -86 -127 149 -43 -285 160 -1145 -1145 -27 -1145 170 -17 -285 146 -275 -1145 -186 -53 164 -275 -86 160 -275 -43 -1145 -1145 177 -275 -86 167 -1145 -76 -27 -1145 141 -17 -186 139 -275 -275 -1145 -53 170 -76 -285 160 -275 -275 -1145 -127 183 -1145 -127 173 -275 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 27 nsites= 28 E= 1.4e-062 0.071429 0.035714 0.857143 0.035714 0.035714 0.071429 0.071429 0.821429 0.000000 0.178571 0.642857 0.178571 0.035714 0.107143 0.214286 0.642857 0.035714 0.000000 0.821429 0.142857 0.035714 0.000000 0.178571 0.785714 0.000000 0.035714 0.928571 0.035714 0.000000 0.035714 0.178571 0.785714 0.035714 0.000000 0.892857 0.071429 0.000000 0.142857 0.142857 0.714286 0.000000 0.107143 0.857143 0.035714 0.035714 0.214286 0.107143 0.642857 0.071429 0.214286 0.678571 0.035714 0.071429 0.142857 0.107143 0.678571 0.178571 0.035714 0.785714 0.000000 0.000000 0.214286 0.000000 0.785714 0.214286 0.035714 0.714286 0.035714 0.000000 0.071429 0.178571 0.750000 0.035714 0.142857 0.785714 0.035714 0.178571 0.000000 0.000000 0.821429 0.035714 0.142857 0.821429 0.000000 0.142857 0.214286 0.000000 0.642857 0.214286 0.071429 0.678571 0.035714 0.035714 0.000000 0.178571 0.785714 0.142857 0.035714 0.785714 0.035714 0.035714 0.000000 0.107143 0.857143 0.000000 0.107143 0.857143 0.035714 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-5 regular expression -------------------------------------------------------------------------------- GTG[TG]GTGTGTG[TC][GC]TG[TC][GA]TGTG[TC][GA]TGTG -------------------------------------------------------------------------------- Time 1639.44 secs. ******************************************************************************** ******************************************************************************** MOTIF AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA MEME-6 width = 31 sites = 16 llr = 418 E-value = 2.4e-055 ******************************************************************************** -------------------------------------------------------------------------------- Motif AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA MEME-6 Description -------------------------------------------------------------------------------- Simplified A 7a:6::1414111:41144151:3:968a6a pos.-specific C ::3:5:13:6::::63:135::6:::::::: probability G :::1::9:5:::1:::921449::11::::: matrix T 3:745a:34:999a16132:1:479:42:4: bits 2.1 * * * * * 1.8 * * * * * 1.6 * * ** * * * * * 1.4 * * **** * ** ** * Relative 1.2 ** ** **** * * *** ** * Entropy 1.0 *** *** ***** * ********** (37.7 bits) 0.8 ******* ******* * *********** 0.6 ******* ********* ************ 0.4 ***************** ************ 0.2 ******************************* 0.0 ------------------------------- Multilevel AATACTGAGCTTTTCTGAACAGCTTAAAAAA consensus T CTT CTA AC TCGG TA T T sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr4:120256193-120256693 - 70 9.34e-16 . AATACTGCGCTTTTCTGATGGGCTTAAAAAA CGGCGCACCA chr3:18330704-18331204 - 67 1.17e-15 CCG AATACTGTGCTTTTCCGACGGGCTTAAAAAA TGACGCACCT chr13:93496019-93496519 - 15 2.67e-15 CTCCCACCCG AATATTGTGCTTTTCAGACCAGCTTAAAAAA CGGCGCACCA chr10:35858741-35859241 + 15 3.85e-15 ctcccacccg aatactgcgcttttccgatgggcttaaaaaa cggcacacca chr3:17860870-17861370 - 8 1.01e-14 CTCCCACCCG AATACTGCGCTTTTCCGGCGGGCTTAAAAAA CGGCGCA chr5:131312398-131312898 - 52 2.29e-14 CTCCCACCCA AATACTGTGCTTTTCCGAGGGGCTTAAAAAA CAGCGCACCA chr5:90668068-90668568 - 52 4.77e-14 CTCCCACCAG AATACTGCACTTTTCCGACGGGCTTAAAAAA CGGCGCACCA chrUn_KI270466v1:125-625 + 33 7.53e-14 atattttgga tattttgatattttatgtacagtatataata tatattttgg chr4:49709157-49709657 - 26 2.18e-13 ATACTTTGGG TACTTTGATATTTTATGTACAGTATATAATA CATACTTTGG chr12:96315998-96316498 + 31 2.18e-13 ctcccacccg aatattgcgcttgtcagaccggcttaaaaaa cggcgcacca chrUn_KI270467v1:3129-36 + 58 4.27e-13 atattttggg tactttgatattttatggacagtatataata cacagtttgg chrUn_KI270467v1:2156-26 + 70 4.68e-13 gtagtttgag tactttgatattttatgtacagtttattata chrUn_KI270467v1:2926-34 + 10 1.66e-12 taatttggg tactttgatattttatgtacagtatgtaata tatattttga chrUn_KI270467v1:1948-24 + 29 8.96e-12 atatttgggc aactttaatatattatgtacagcatataata tatatttggt chr1:225655578-225656078 + 15 1.21e-09 ccaagtggaa aatgctgttcttattttctatgtttattaaa aatgtaccag chr15:70761582-70762082 + 43 1.93e-09 ATACCTACTA AATACTCTGCATTTCTAGAAAACTGGATAAA ATTAAGGCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr4:120256193-120256693 9.3e-16 69_[-6] chr3:18330704-18331204 1.2e-15 66_[-6]_3 chr13:93496019-93496519 2.7e-15 14_[-6]_55 chr10:35858741-35859241 3.8e-15 14_[+6]_55 chr3:17860870-17861370 1e-14 7_[-6]_62 chr5:131312398-131312898 2.3e-14 51_[-6]_18 chr5:90668068-90668568 4.8e-14 51_[-6]_18 chrUn_KI270466v1:125-625 7.5e-14 32_[+6]_37 chr4:49709157-49709657 2.2e-13 25_[-6]_44 chr12:96315998-96316498 2.2e-13 30_[+6]_39 chrUn_KI270467v1:3129-36 4.3e-13 57_[+6]_12 chrUn_KI270467v1:2156-26 4.7e-13 69_[+6] chrUn_KI270467v1:2926-34 1.7e-12 9_[+6]_60 chrUn_KI270467v1:1948-24 9e-12 28_[+6]_41 chr1:225655578-225656078 1.2e-09 14_[+6]_55 chr15:70761582-70762082 1.9e-09 42_[+6]_27 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA width=31 seqs=16 chr4:120256193-120256693 ( 70) AATACTGCGCTTTTCTGATGGGCTTAAAAAA 1 chr3:18330704-18331204 ( 67) AATACTGTGCTTTTCCGACGGGCTTAAAAAA 1 chr13:93496019-93496519 ( 15) AATATTGTGCTTTTCAGACCAGCTTAAAAAA 1 chr10:35858741-35859241 ( 15) AATACTGCGCTTTTCCGATGGGCTTAAAAAA 1 chr3:17860870-17861370 ( 8) AATACTGCGCTTTTCCGGCGGGCTTAAAAAA 1 chr5:131312398-131312898 ( 52) AATACTGTGCTTTTCCGAGGGGCTTAAAAAA 1 chr5:90668068-90668568 ( 52) AATACTGCACTTTTCCGACGGGCTTAAAAAA 1 chrUn_KI270466v1:125-625 ( 33) TATTTTGATATTTTATGTACAGTATATAATA 1 chr4:49709157-49709657 ( 26) TACTTTGATATTTTATGTACAGTATATAATA 1 chr12:96315998-96316498 ( 31) AATATTGCGCTTGTCAGACCGGCTTAAAAAA 1 chrUn_KI270467v1:3129-36 ( 58) TACTTTGATATTTTATGGACAGTATATAATA 1 chrUn_KI270467v1:2156-26 ( 70) TACTTTGATATTTTATGTACAGTTTATTATA 1 chrUn_KI270467v1:2926-34 ( 10) TACTTTGATATTTTATGTACAGTATGTAATA 1 chrUn_KI270467v1:1948-24 ( 29) AACTTTAATATATTATGTACAGCATATAATA 1 chr1:225655578-225656078 ( 15) AATGCTGTTCTTATTTTCTATGTTTATTAAA 1 chr15:70761582-70762082 ( 43) AATACTCTGCATTTCTAGAAAACTGGATAAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 11.3576 E= 2.4e-055 151 -1064 -1064 37 205 -1064 -1064 -1064 -1064 27 -1064 151 122 -1064 -205 64 -1064 95 -1064 105 -1064 -1064 -1064 205 -195 -205 176 -1064 64 27 -1064 37 -195 -1064 95 86 64 127 -1064 -1064 -195 -1064 -1064 196 -195 -1064 -1064 196 -195 -1064 -205 186 -1064 -1064 -1064 205 64 112 -1064 -195 -95 27 -1064 122 -195 -1064 176 -195 86 -205 -46 37 86 27 -205 -36 -95 95 54 -1064 105 -1064 76 -195 -195 -1064 186 -1064 -1064 127 -1064 64 37 -1064 -1064 151 -1064 -1064 -205 196 186 -1064 -105 -1064 122 -1064 -1064 86 175 -1064 -1064 -36 205 -1064 -1064 -1064 137 -1064 -1064 64 205 -1064 -1064 -1064 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 16 E= 2.4e-055 0.687500 0.000000 0.000000 0.312500 1.000000 0.000000 0.000000 0.000000 0.000000 0.312500 0.000000 0.687500 0.562500 0.000000 0.062500 0.375000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.000000 1.000000 0.062500 0.062500 0.875000 0.000000 0.375000 0.312500 0.000000 0.312500 0.062500 0.000000 0.500000 0.437500 0.375000 0.625000 0.000000 0.000000 0.062500 0.000000 0.000000 0.937500 0.062500 0.000000 0.000000 0.937500 0.062500 0.000000 0.062500 0.875000 0.000000 0.000000 0.000000 1.000000 0.375000 0.562500 0.000000 0.062500 0.125000 0.312500 0.000000 0.562500 0.062500 0.000000 0.875000 0.062500 0.437500 0.062500 0.187500 0.312500 0.437500 0.312500 0.062500 0.187500 0.125000 0.500000 0.375000 0.000000 0.500000 0.000000 0.437500 0.062500 0.062500 0.000000 0.937500 0.000000 0.000000 0.625000 0.000000 0.375000 0.312500 0.000000 0.000000 0.687500 0.000000 0.000000 0.062500 0.937500 0.875000 0.000000 0.125000 0.000000 0.562500 0.000000 0.000000 0.437500 0.812500 0.000000 0.000000 0.187500 1.000000 0.000000 0.000000 0.000000 0.625000 0.000000 0.000000 0.375000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATWYTGHKMTTTTMYGWMSRGYTTAWAAWA MEME-6 regular expression -------------------------------------------------------------------------------- [AT]A[TC][AT][CT]TG[ACT][GT][CA]TTTT[CA][TC]G[AT][AC][CG][AG]G[CT][TA]TA[AT]AA[AT]A -------------------------------------------------------------------------------- Time 1933.04 secs. ******************************************************************************** ******************************************************************************** MOTIF TTTATTTWTTTW MEME-7 width = 12 sites = 48 llr = 574 E-value = 6.0e-041 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTATTTWTTTW MEME-7 Description -------------------------------------------------------------------------------- Simplified A :::81::63::5 pos.-specific C ::::1:1::::: probability G :11::11::::: matrix T a99199947aa5 bits 2.1 * 1.8 * ** 1.6 *** ** 1.4 *** * ** Relative 1.2 ******* ** Entropy 1.0 ************ (17.3 bits) 0.8 ************ 0.6 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel TTTATTTATTTA consensus TA T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTWTTTW MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr12:48866317-48866817 + 86 3.84e-08 tatttattta tttatttattta ttt chr3:194427434-194427934 - 4 3.84e-08 TATTTATTTA TTTATTTATTTA TTG chr19:35385860-35386360 + 86 3.84e-08 tatttattta tttatttattta ttt chr17:38667040-38667540 - 4 3.84e-08 TATTTATTTA TTTATTTATTTA TTT chr12:32017172-32017672 + 6 3.84e-08 tttat tttatttattta tttattattt chr10:97421658-97422158 - 2 3.84e-08 TATTTATTTA TTTATTTATTTA T chr3:181267272-181267772 + 88 3.84e-08 ttttagggta tttatttattta t chr6:96811614-96812114 - 27 3.84e-08 TATTTATTTA TTTATTTATTTA TTTTTAATGA chr5:36992450-36992950 + 89 3.84e-08 tatttattta tttatttattta chr17:60753114-60753614 + 86 3.84e-08 tatttattta tttatttattta ttt chr7:94942582-94943082 - 24 3.84e-08 TATTTATTTA TTTATTTATTTA TTGAGAGACA chr9:132357696-132358196 - 22 3.84e-08 TATTTATTTA TTTATTTATTTA TTTTTGGAGA chr10:25876829-25877329 - 19 3.84e-08 TATTTATTTA TTTATTTATTTA TTTTTGAGAC chr12:57207020-57207520 - 23 3.84e-08 TATTTATTTA TTTATTTATTTA GAGACCGAGT chr17:63254826-63255326 + 84 7.68e-08 tttattttta tttatttatttt tgaga chr1:61235261-61235761 - 2 7.68e-08 TATTTATTTA TTTATTTATTTT G chr5:78762706-78763206 - 27 7.68e-08 TATTTATTTA TTTATTTATTTT TGAGACAGAG chr12:53550115-53550615 - 12 1.54e-07 TATTTATTTA TTTATTTTTTTT TTTGAGACAG chr7:84738536-84739036 - 81 3.07e-07 GTTTTTAT TTTATTTTATTT TATTTTTATT chr18:2565841-2566341 - 46 3.07e-07 TATTTATTTG TTTATTTTATTT ATTTATTTAT chr5:115311219-115311719 + 2 3.07e-07 t tttattttattt tattttattt chr12:122512978-12251347 - 85 3.84e-07 CTAC TTTTTTTATTTT TTATTTTTAT chr19:50136745-50137245 + 3 7.41e-07 tt tttattcatttt ctgcctgttt chr7:118054048-118054548 - 86 9.83e-07 ATT TTTAATTTTTTA TTTTATTTTA chr19:43709348-43709848 + 81 1.31e-06 tatttcgtta tttacttatttt gtagtttt chr5:32157863-32158363 - 61 3.34e-06 TGTGTGTGTG TGTATTTTATTT ATTTATTTAT chr9:22005739-22006239 - 7 3.50e-06 CCACAACGAC TTTATTTTCTTA CCCAAT chr6:137838078-137838578 + 88 3.82e-06 tatctttgtt tttattgtattt g chr6:56840737-56841237 - 36 4.06e-06 GGAAGTCATT TTGATTTTATTT CTGACAGAGT chr12:109939461-10993996 - 8 4.30e-06 ATTTATTTTA TTTATTTTTTAA ATGTTGC chr1:160300123-160300623 - 86 4.55e-06 AAA TTTTATTTTTTA GGAGTTTGAT chr5:96781013-96781513 - 64 4.83e-06 TGGCAGACTT TTTTTTCTTTTA CAAGTAATTT chr1:223186742-223187242 + 32 4.83e-06 cccagctaat tttcttttattt atttatttat chr19:35461732-35462232 - 72 5.68e-06 ATTTTTTTCT TTTTCTTTTTTA AAATCAACTA chr7:98598795-98599295 - 14 5.68e-06 TATTTATTAT TTTTTTGTTTTA AATAGAGACA chr3:181531705-181532205 + 76 6.46e-06 AAGTTTTCTT TTTATTTAATGT GCCAGATGTT chr5:95920040-95920540 + 17 7.55e-06 GTTGTTGTTA tttttattttta aatttttaat chr5:118933655-118934155 - 87 7.55e-06 GC TGTACTTATTTA CTTGTTCTTG chr1:230796106-230796606 - 81 8.10e-06 CTCACCTT TTTATTTTAATT TAATTTAATT chr1:245044260-245044760 + 88 8.10e-06 tcgcccaggc tggatttattta t chr19:40795139-40795639 + 26 8.10e-06 CAAAGGCAGG TTCATtttattt atttatttat chr6:28757444-28757944 - 86 8.89e-06 CGA TTGATTCATTTT CCTGTATTGC chr4:190111855-190112355 - 88 8.89e-06 T TTTTATTTATTT ATTTATTTAT chr6:52482935-52483435 + 38 1.11e-05 aagtttgtac tttatgcaatta ctcatagtta chr6:28807681-28808181 - 57 1.21e-05 CAAATGGCAG TTTCTGTATTTT GAAGAAATGA chr12:12230232-12230732 - 29 1.21e-05 TAGTCACCTG TGTATGTAATTA CATCTTGTAA chr2:175233116-175233616 + 80 1.39e-05 GGTCCTGTAT TTTATAGATTTT AAGTAATGT chr5:88243426-88243926 + 20 1.58e-05 ggtaatctgt tttaagttattt gagaagtcgc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTWTTTW MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:48866317-48866817 3.8e-08 85_[+7]_3 chr3:194427434-194427934 3.8e-08 3_[-7]_85 chr19:35385860-35386360 3.8e-08 85_[+7]_3 chr17:38667040-38667540 3.8e-08 3_[-7]_85 chr12:32017172-32017672 3.8e-08 5_[+7]_83 chr10:97421658-97422158 3.8e-08 1_[-7]_87 chr3:181267272-181267772 3.8e-08 87_[+7]_1 chr6:96811614-96812114 3.8e-08 26_[-7]_62 chr5:36992450-36992950 3.8e-08 88_[+7] chr17:60753114-60753614 3.8e-08 85_[+7]_3 chr7:94942582-94943082 3.8e-08 23_[-7]_65 chr9:132357696-132358196 3.8e-08 21_[-7]_67 chr10:25876829-25877329 3.8e-08 18_[-7]_70 chr12:57207020-57207520 3.8e-08 22_[-7]_66 chr17:63254826-63255326 7.7e-08 83_[+7]_5 chr1:61235261-61235761 7.7e-08 1_[-7]_87 chr5:78762706-78763206 7.7e-08 26_[-7]_62 chr12:53550115-53550615 1.5e-07 11_[-7]_77 chr7:84738536-84739036 3.1e-07 80_[-7]_8 chr18:2565841-2566341 3.1e-07 45_[-7]_43 chr5:115311219-115311719 3.1e-07 1_[+7]_87 chr12:122512978-12251347 3.8e-07 84_[-7]_4 chr19:50136745-50137245 7.4e-07 2_[+7]_86 chr7:118054048-118054548 9.8e-07 85_[-7]_3 chr19:43709348-43709848 1.3e-06 80_[+7]_8 chr5:32157863-32158363 3.3e-06 60_[-7]_28 chr9:22005739-22006239 3.5e-06 6_[-7]_82 chr6:137838078-137838578 3.8e-06 87_[+7]_1 chr6:56840737-56841237 4.1e-06 35_[-7]_53 chr12:109939461-10993996 4.3e-06 7_[-7]_81 chr1:160300123-160300623 4.5e-06 85_[-7]_3 chr5:96781013-96781513 4.8e-06 63_[-7]_25 chr1:223186742-223187242 4.8e-06 31_[+7]_57 chr19:35461732-35462232 5.7e-06 71_[-7]_17 chr7:98598795-98599295 5.7e-06 13_[-7]_75 chr3:181531705-181532205 6.5e-06 75_[+7]_13 chr5:95920040-95920540 7.6e-06 16_[+7]_72 chr5:118933655-118934155 7.6e-06 86_[-7]_2 chr1:230796106-230796606 8.1e-06 80_[-7]_8 chr1:245044260-245044760 8.1e-06 87_[+7]_1 chr19:40795139-40795639 8.1e-06 25_[+7]_63 chr6:28757444-28757944 8.9e-06 85_[-7]_3 chr4:190111855-190112355 8.9e-06 87_[-7]_1 chr6:52482935-52483435 1.1e-05 37_[+7]_51 chr6:28807681-28808181 1.2e-05 56_[-7]_32 chr12:12230232-12230732 1.2e-05 28_[-7]_60 chr2:175233116-175233616 1.4e-05 79_[+7]_9 chr5:88243426-88243926 1.6e-05 19_[+7]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTWTTTW MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTATTTWTTTW width=12 seqs=48 chr12:48866317-48866817 ( 86) TTTATTTATTTA 1 chr3:194427434-194427934 ( 4) TTTATTTATTTA 1 chr19:35385860-35386360 ( 86) TTTATTTATTTA 1 chr17:38667040-38667540 ( 4) TTTATTTATTTA 1 chr12:32017172-32017672 ( 6) TTTATTTATTTA 1 chr10:97421658-97422158 ( 2) TTTATTTATTTA 1 chr3:181267272-181267772 ( 88) TTTATTTATTTA 1 chr6:96811614-96812114 ( 27) TTTATTTATTTA 1 chr5:36992450-36992950 ( 89) TTTATTTATTTA 1 chr17:60753114-60753614 ( 86) TTTATTTATTTA 1 chr7:94942582-94943082 ( 24) TTTATTTATTTA 1 chr9:132357696-132358196 ( 22) TTTATTTATTTA 1 chr10:25876829-25877329 ( 19) TTTATTTATTTA 1 chr12:57207020-57207520 ( 23) TTTATTTATTTA 1 chr17:63254826-63255326 ( 84) TTTATTTATTTT 1 chr1:61235261-61235761 ( 2) TTTATTTATTTT 1 chr5:78762706-78763206 ( 27) TTTATTTATTTT 1 chr12:53550115-53550615 ( 12) TTTATTTTTTTT 1 chr7:84738536-84739036 ( 81) TTTATTTTATTT 1 chr18:2565841-2566341 ( 46) TTTATTTTATTT 1 chr5:115311219-115311719 ( 2) TTTATTTTATTT 1 chr12:122512978-12251347 ( 85) TTTTTTTATTTT 1 chr19:50136745-50137245 ( 3) TTTATTCATTTT 1 chr7:118054048-118054548 ( 86) TTTAATTTTTTA 1 chr19:43709348-43709848 ( 81) TTTACTTATTTT 1 chr5:32157863-32158363 ( 61) TGTATTTTATTT 1 chr9:22005739-22006239 ( 7) TTTATTTTCTTA 1 chr6:137838078-137838578 ( 88) TTTATTGTATTT 1 chr6:56840737-56841237 ( 36) TTGATTTTATTT 1 chr12:109939461-10993996 ( 8) TTTATTTTTTAA 1 chr1:160300123-160300623 ( 86) TTTTATTTTTTA 1 chr5:96781013-96781513 ( 64) TTTTTTCTTTTA 1 chr1:223186742-223187242 ( 32) TTTCTTTTATTT 1 chr19:35461732-35462232 ( 72) TTTTCTTTTTTA 1 chr7:98598795-98599295 ( 14) TTTTTTGTTTTA 1 chr3:181531705-181532205 ( 76) TTTATTTAATGT 1 chr5:95920040-95920540 ( 17) TTTTTATTTTTA 1 chr5:118933655-118934155 ( 87) TGTACTTATTTA 1 chr1:230796106-230796606 ( 81) TTTATTTTAATT 1 chr1:245044260-245044760 ( 88) TGGATTTATTTA 1 chr19:40795139-40795639 ( 26) TTCATTTTATTT 1 chr6:28757444-28757944 ( 86) TTGATTCATTTT 1 chr4:190111855-190112355 ( 88) TTTTATTTATTT 1 chr6:52482935-52483435 ( 38) TTTATGCAATTA 1 chr6:28807681-28808181 ( 57) TTTCTGTATTTT 1 chr12:12230232-12230732 ( 29) TGTATGTAATTA 1 chr2:175233116-175233616 ( 80) TTTATAGATTTT 1 chr5:88243426-88243926 ( 20) TTTAAGTTATTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTWTTTW MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 11.2185 E= 6.0e-041 -1223 -1223 -1223 205 -1223 -1223 -163 193 -1223 -363 -205 193 175 -263 -1223 -73 -153 -205 -1223 182 -253 -1223 -163 186 -1223 -163 -205 182 127 -1223 -1223 79 27 -363 -1223 151 -353 -1223 -1223 202 -353 -1223 -363 199 117 -1223 -1223 93 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTWTTTW MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 48 E= 6.0e-041 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.083333 0.916667 0.000000 0.020833 0.062500 0.916667 0.812500 0.041667 0.000000 0.145833 0.083333 0.062500 0.000000 0.854167 0.041667 0.000000 0.083333 0.875000 0.000000 0.083333 0.062500 0.854167 0.583333 0.000000 0.000000 0.416667 0.291667 0.020833 0.000000 0.687500 0.020833 0.000000 0.000000 0.979167 0.020833 0.000000 0.020833 0.958333 0.541667 0.000000 0.000000 0.458333 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTWTTTW MEME-7 regular expression -------------------------------------------------------------------------------- TTTATTT[AT][TA]TT[AT] -------------------------------------------------------------------------------- Time 2225.32 secs. ******************************************************************************** ******************************************************************************** MOTIF VGSGGGGMGGRGGSGGGSRSGG MEME-8 width = 22 sites = 149 llr = 1341 E-value = 8.7e-037 ******************************************************************************** -------------------------------------------------------------------------------- Motif VGSGGGGMGGRGGSGGGSRSGG MEME-8 Description -------------------------------------------------------------------------------- Simplified A 3:2:21141131213:11212: pos.-specific C 31521234112115:3232513 probability G 5837587178577367564457 matrix T :::12::11:11:11:2:2:2: bits 2.1 1.8 1.6 1.4 Relative 1.2 * Entropy 1.0 * * * * (13.0 bits) 0.8 * * ** * * * 0.6 * * ** ** ** ** * * * 0.4 **** ***** ** ** * * * 0.2 ****************** *** 0.0 ---------------------- Multilevel GGCGGGGAGGGGGCGGGGGCGG consensus A G A CC A AGAC CAGTC sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VGSGGGGMGGRGGSGGGSRSGG MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr1:1309395-1309895 + 26 8.36e-10 TGGCCCTGAC AGCGGGGAGGGGGCGGGCAGGC CGGCCCCACC chr22:35840406-35840906 + 52 9.44e-09 gtgtgtgtgt AGGGGGGAGGAGGTAGGGAGGG GCAAGCGCCA chr5:71455477-71455977 + 32 1.40e-08 cggcggcggg agagaggaggaggcggcggcgg ggcAGTGAAA chr17:37358653-37359153 - 66 1.70e-08 TGGGGCCAAG GGAGGGGCGGCGGCAGGCAGGG GGCCGCCTCC chr17:38464837-38465337 + 62 1.70e-08 CCGGAGCTGG GGGTGGGCGGAGGCGGGCTGGG ATGCTGCCGC chr6:30686985-30687485 + 27 2.49e-08 GAGACTggag ggaggggaggagggagggagag gaggagggaA chr17:36545475-36545975 + 5 8.66e-08 cggc agctgggaggaggtggtgacgg tggcaacggc chr6:31620689-31621189 + 31 1.68e-07 ggtggcggtg gcggtggcggcggcggcggcgg tggTGGGCCG chr8:143597227-143597727 + 46 1.97e-07 AGCCACGGGC CGGGGGCCCGGGGGGGGGACGC GACCCTTGCA chr17:45783168-45783668 + 1 2.31e-07 . GGCCGGGAGGGGGCGCTGTGTC CTCCCCACGC chr6:32175693-32176193 + 68 5.75e-07 CCCGGCCGAT GGAGGGGAGGTGGGAGTGGGAG GTTGGGCCCA chr19:40602072-40602572 + 15 7.68e-07 GCGCCCCCTG GGGGCGGAGGGGACAGGAGGTG TATGCACCAG chr19:39410047-39410547 - 23 7.68e-07 GGGAAGTGAG AGGGAGGAGGGAGGAGTGCGGG GCAAGGAGAA chr1:2546383-2546883 + 35 7.68e-07 GTCCCCGGCG AGCCTGGCGGGGGTGGCGGCAG GGGTGTCTGT chr19:56478015-56478515 + 2 7.68e-07 A AGGGACGAGGAGGGGCGGACAG CGGAAGGTCC chr1:155261969-155262469 - 2 8.85e-07 CTGCGGCAGG GGCGTGGAGGGCAGAGGGCCGC G chr6:30556243-30556743 + 34 8.85e-07 AGGGCGCCCC GGCGGCGAGGAAGGAGGCGCGC GTGGGAGGAC chr17:38730531-38731031 - 67 8.85e-07 TGTGCGAGGA GGAGGGGAGGATGGGGGGACTC ACCAGCCAGG chr6:148863984-148864484 - 23 8.85e-07 GCGAGGTGGC AGCCAGGCTGGGGGAGGGGCGC CTGCCATTGC chr6:30647266-30647766 + 2 1.02e-06 G AGCGGGAGGGAGGCGCTGCCGG GCCTGTCGCG chr1:210292345-210292845 + 37 1.17e-06 GGCCTGGTCT GGGTGGGAGGGGACGCGAAGAG GCTCCGGGCT chr19:36418411-36418911 + 59 1.17e-06 GAGGCTGCTG GGAGGGCCGGGCGCGCTCACGG AGTGCGCAGG chr10:3785798-3786298 - 40 1.34e-06 CTAGGACTGG AGGGGGACGGAGACGGGCTCAG GGATGGAGGG chr6:31971796-31972296 + 65 1.54e-06 GCAAACCCCT CCCGGGGCGGGGGAGGTGTGAG CTTCACGAAG chr9:133356474-133356974 + 19 1.54e-06 ggaggggaac ggagtggcggagaagggcgcag ttgggatgag chr5:69369340-69369840 + 3 1.76e-06 AC AGGGAGGAGCCGGAAGGGGCGG GCGGCAGCAA chr14:100239298-10023979 + 71 1.76e-06 GGTGCAGACG CGCGAGGAGGTGGTGGGCGGCG ACGACTCG chr16:4402497-4402997 - 52 2.98e-06 AGCCTGATGA GCCGGGGAGGACGCGGCCTCTG CAGCCCAGTT chr6:33161580-33162080 + 28 2.98e-06 GGAAGAAGTA CGGGGAGGAGGGGCGGGGGCGC AGCCTACCCG chr17:35809283-35809783 - 5 3.38e-06 ACGAAAGCCA GGCGGCGCGGCGGCCGGAGCTG TACT chr19:12156297-12156797 - 15 3.38e-06 GGCCGGGGGT CCCGAGACGGGGGAGGGGCCGG GAGGAACCGG chr17:38606285-38606785 - 38 3.38e-06 TGCAACCCGG AGCGGGGGCGAGGCGGCGGCCC AGCAGGGGGC chr22:23857061-23857561 + 21 3.84e-06 AGCAAAGGAG GGGGACGAGGGGCCAGAGCCGG AATTTCGGGG chr1:998054-998554 + 20 3.84e-06 ACCTCCCTTA CCGGGGCAGGGGAGGCTGCGGG CAGGGCCGAC chr6:31158488-31158988 + 45 4.35e-06 GTAGATCCGA AACGGGGCTGGGGCGGAGTGGG AAAAGGCCGG chr3:44761551-44762051 + 61 4.92e-06 GCGGTGCAGT CGGGAGGTGGAGGCACCGGCTG CATTGTTTTC chr17:48023670-48024170 - 72 4.92e-06 CTGCCAC AGGCCGGAGCCGGCGGGCGCGG AGGGGAGCGC chr19:34171949-34172449 - 77 5.56e-06 GC GGGCTGGAGAGGAGGCGCGCGG CCTTCCTTTT chr19:18433015-18433515 - 7 5.56e-06 CCGGAAGGCA ACGTGGGCGGGAGCAGGGACGC CCACTC chr17:8123983-8124483 + 55 5.56e-06 GGAAAGAGGA GGAGTGAAGGGGGGAGGGGAAG GAGAGAAACT chr19:36418207-36418707 + 28 6.28e-06 GACACACACA CCCGGGCCTGAGGCGCGGGCTC CCGCCCCTCT chr6:31403521-31404021 + 7 6.28e-06 GTCCTC GGCGGAGCGGGAGCAGTGGGAC GTTTCCGGGG chr5:88683599-88684099 - 55 6.28e-06 TCCTTGTTAC AGAGAGCAGAGGGAGGGGGCAG AGGGAATGAG chr6:33454284-33454784 + 78 6.28e-06 GACGGTGTCC GGCGGGGAGGCGGCGGCTTCCG G chr17:81393039-81393539 + 54 6.28e-06 CGCCTGCACC CGCGGGGCCGGGACCCGGAGGC ACCCGCTTCC chr9:133336027-133336527 + 60 7.08e-06 CTCCGCCGGA AGCGGCGCGCGGGGCGGGGCGC ACAGCATTGC chr19:40602294-40602794 - 67 7.08e-06 AAAGAGGGAG GAAGGGGAGGAGAGAGGGAGTG GCAGCGGGCG chr1:41432629-41433129 - 62 7.97e-06 ACGTGGTCTG GGCCAGCAGGGGGCGCTGCAGC AGCAGAAATG chr6:128520228-128520728 + 20 8.96e-06 GGCCGGGCCT CGCGGGGTGAGGACGGTGAGAG GACAGCCGCC chr10:74825715-74826215 + 4 1.01e-05 acg ggacgggacgggagagagggtg gaggaggggg chr12:11171202-11171702 - 44 1.13e-05 GCTCGAAGAA GGCGAGCAGGGTGCGGGAGAGC CCCTTGCAGA chr6:33454078-33454578 - 45 1.13e-05 GAGAACAGCC CGGTCGGAGGGGGTGGGCCGTC AGCCGCCCCG chr6:29553442-29553942 - 69 1.13e-05 TGGTCCAGCA GGCGGGGCGCGCACAGCGGCCG CTCAGCCAGG chr4:48906456-48906956 - 69 1.13e-05 GGGAAGCTGG AGCGGGCCGGCGGTGCAGTCAC GGGGGAGCGA chr19:53537575-53538075 + 9 1.13e-05 GAGTGGGA GGAGGGAAAGGGATGGGAGGGG TGCACGCACA chr6:29748557-29749057 - 6 1.13e-05 TGCGCTGTCG GGGGTGCGGGGAGTGGACGCGG CCCGT chrX:155881278-155881778 + 50 1.13e-05 GAAAGGTGCT GGGGTGGAGCGAGGAGGCAGTG CAGGGGTGAC chr6:30557066-30557566 - 19 1.26e-05 TTTGGAGGGT AGTGAGGAAGGGGCACGCGGGG ATTCTGTTTC chr6:32153949-32154449 - 15 1.26e-05 CTGGAACCCA CGGTGGCGGGGGGAAGGGTGAG GAAAGAGAGC chr19:34254117-34254617 - 79 1.41e-05 . AGCGGGACGGCCGGGGCGGAGG TTGAGGACTG chr1:153775684-153776184 + 1 1.41e-05 . GGCGAGCGGGCAGCGCCGGGAG CCGGAGATGC chr17:64661067-64661567 + 32 1.41e-05 GCCCGGGCAG CGGTGGCCGGCGGCGGGGAGTA AAGGTTTTTC chr19:39833787-39834287 - 9 1.58e-05 TTCAGGTAAC GGCGCGGGGACGGGTGGGGCGG CAAGCGGT chr6:28866475-28866975 - 66 1.58e-05 CGCGAGTTCC GGGTGGGCGTGGGCTCGGCGGG CTCCGCACTC chr16:425155-425655 - 52 1.58e-05 GCTTCGGGCG CGGGACGCGGGGGTGCTCCGAG GCTGCGAGTG chr6:33208196-33208696 - 15 1.58e-05 CACCATTCGC GGCGCGGGTGGGACGGGACGTG GACGCCGCGG chr6:170306683-170307183 - 39 1.77e-05 GGGCAGAAGC CGAGGGGCTGACGCGCGCGAGG GTCGGACGCG chr19:39824025-39824525 - 68 1.77e-05 TCACTAATGG AGGCGGCATGGAACGCGGTGGG AACCCGAGGA chr6:32583834-32584334 - 49 1.77e-05 GGCGAGGTGA GCATGGCCGCGGGCGGGGCCTG AGTCCCCGTG chr6:28814080-28814580 + 75 1.77e-05 CAGAGGATCT GGGTGGGCCGGAAGGCGGAGTG CAGC chr8:143578257-143578757 + 29 1.77e-05 AAACAGCTGG ACCCGGGATGGGGTGGGGGATG TCACCCAACT chr1:234607223-234607723 + 1 1.77e-05 . GGCTGGCAGGGTGCACTGGCTC CAGTCCTCCT chr6:31399508-31400008 + 20 1.77e-05 GTCAGGGAAG GGACGCGAGGCGGCGCTGTCAC CGCATTCTGA chr1:155250584-155251084 + 42 1.77e-05 TGGACACTGT GGGCGGCAGGGGGCGCTGTGTA GCACCAgcct chr17:38747479-38747979 - 28 1.97e-05 CGTGGGCACA GGGGCGCCGTGGACGCGCGGGG ACTTGGGGCC chr6:30345071-30345571 - 12 2.19e-05 AGGACACAAT GGGCGGCCTGCGGGAGGGGAGC AGTCACTCTG chr1:120197207-120197707 + 1 2.19e-05 . CGCGCGGAGGGCTGGGGCCCGG GACTGAAGAT chr6:29942393-29942893 + 28 2.19e-05 ACCCAGACCT GGGCGGGTGAGTGCGGGGTCGG GAGGGAAACC chr19:48716680-48717180 - 25 2.19e-05 CTGCGCTGGC AGGGAGCAGGCGGGAGGCCCGA GGAAGGGAGC chr22:23893873-23894373 - 6 2.44e-05 GAGGCGCTGT GCCGGGGGTGGGGATGCGGCGG TGAAC chr6:31958944-31959444 + 78 2.44e-05 TTGGTGAGGG GGAGGGGAGGGAAATGGAACGG A chr11:3057504-3058004 + 18 2.71e-05 GGAGGTCAGA GGCGGCCTCGGGACAGGGTGTG CTGGCGAGAC chr18:79570407-79570907 + 19 2.71e-05 CCAGCAAGCA GGGTGGGTGAGGATGGGGACGC TTTCCTCTCC chr19:34359200-34359700 - 72 3.01e-05 GGGTTGA GCGCAGGCGCGGATGGGGCGGG GGTAATGCGC chr6:29628530-29629030 - 50 3.01e-05 GCCCAGCAGA GGGCGGCAGGGTGCTGGGAGAC CCTGAGCTCC chr6:33425648-33426148 + 46 3.01e-05 GCGGCCCCAC GGCGAGCATGGTACGGCGGCCG AGCAGGCTCT chr22:46080009-46080509 + 72 3.01e-05 ATTCCCGGTG GGCGGGGCTGAGCTGCAGCGGC CGCCTCT chr19:34359417-34359917 - 44 3.34e-05 CTGAAGAAGT CGGGAGCGGGGCGTGGCGTGGC GTTTCCACGC chr12:12349930-12350430 - 72 3.34e-05 CAAAACC CGCCAGGCCGGTGCGGGAGCTG CGGAGCATCC chr17:38559276-38559776 + 68 3.34e-05 TTCTACCAGT AGGTGGGCGTTGGTGGGGCGGG GCCCAGGACG chr6:33271813-33272313 - 13 3.34e-05 ATCATTATAT AGCTTCCAGGAGGAAGAGGCGG TGCGATCTAG chr6:32894585-32895085 - 51 3.34e-05 CTTTCAGTGC AGGCGGCGGGAGGCGCGAACAC GGAGGACCCC chr17:1684581-1685081 - 47 3.34e-05 GCGCTGGGAA CGCGGAGCGGACGCAGTCTGGC CGCCATTGCG chr1:17212645-17213145 - 74 3.70e-05 GCCAG GGAGGCCTAGGGAGGGTGGCGG CACCAAGGCA chr6:30914168-30914668 + 55 4.10e-05 TGGGCGGGAA GGCTTGGCCGCGCCGGGCTGTG GGCACTGCAG chr6:33391896-33392396 + 50 4.10e-05 GTGGAAAGGG GCGGAGGCAGGAGTGGAGACGG CTTAGAGCAC chr6:165660830-165661330 - 3 4.10e-05 GGCAGGGGTT CGCTAGAAGGAAGCAGGCAGGC GG chr12:12356974-12357474 - 40 4.53e-05 AACGCAAGGA GGCGCGGCGCGAACGCACGCGG CTAGCCCTCC chr6:28838804-28839304 + 8 4.53e-05 ACTGGGG AGCGAGGAAGAGGAGCACCCGC CAGATCGCGC chr6:31806489-31806989 + 75 4.53e-05 CCATGGTGCT GGCGCCGCGGGCAGCGGGCCGG ACCG chr16:14974949-14975449 - 24 4.53e-05 TCCATGGCTG AGGCGGCCGGTGGTGGCCTGGC GGTCCCGGGC chr12:12267105-12267605 - 70 4.53e-05 CCCCACCTG GCCCTGCCGGCGGCGGCCGCAC AAAGAGCGGG chr1:243254883-243255383 - 31 4.53e-05 CGGCGACGAC GACGACGACGAGGTGGGGGGAG GACGGCGTGC chr6:30647465-30647965 - 38 4.53e-05 GACCGCTCTC CGAGTGCAAGACGGGCGGGCTG CTGAGGGCGC chr6:30571292-30571792 + 31 4.53e-05 CGCCGGAGCC CGAGTGGATCGGGGACGGAGAG AGCACGAGCC chr6:31197070-31197570 - 35 5.01e-05 GCAGAAAAAT GGCTTGAACGCGGGAGGCGGAG CTTGCAGGGA chr9:133348088-133348588 - 8 5.01e-05 TCCGAGGCCG CGCCTGGAGGAGGATGGCAGCG GATACAG chr6:31795951-31796451 + 20 5.01e-05 gtatgaaaaa agggTGACggccgggcgcagtg gctcacgcct chr17:17783993-17784493 + 32 5.01e-05 CCCAGGTGGA ACGGGGACTGGGAGGGGCTGGC CTGCTGTGCC chr16:526934-527434 - 66 5.01e-05 GCTTGGTCCT GGCGGCCAAGAGCGGCGGTGGC AAGGGGACCG chr15:30903606-30904106 + 29 5.53e-05 CCTGTGGAAG CGAGACGCGGGGATCGGCTGGG AATGCCTGGA chr18:79678981-79679481 + 4 6.09e-05 CTG CGCGGGCCGAGGGCGGCGCACC TGCCCCTGCG chr16:4425763-4426263 - 70 6.09e-05 AGCAGCGCT CGGGGGCCGCAAGAGGTCAGGG AAGACGCAAA chr9:133239036-133239536 - 55 6.09e-05 GCAGCACTGC CCCGGGGTAAGGGCGGGCGCTG GAGACTGGCA chr5:69559952-69560452 + 36 6.09e-05 CCCCTAAAGC GGCGGAGAGGAGTGTCGGGCTG AGTTTCCGGC chr3:38138520-38139020 - 18 6.09e-05 AGCCAGGGGA AGGGAGGATGTGGAGGAGACCG GGGCCGCAGA chr6:31271721-31272221 - 2 6.71e-05 GAGGGGCCCT CCCGGCGAGGGCGCAGGACCCG G chr5:132294874-132295374 - 22 6.71e-05 AGCAGGTTTG AGGGGGAGGGGAGCGCTGACCC GGGCACTGCG chr18:62890329-62890829 - 15 7.39e-05 TGGAAAAGAA GGCTTGGCGGAGTGGCTCACGC CTGTAATCCC chr1:144551745-144552245 - 37 8.12e-05 CTCGCGGGTG CGCGGGGAAGTGACCGTGCGTG TAAAGGGTGA chr6:30678904-30679404 - 55 8.12e-05 CCCTGATTGT GGGTAAGCGGAGGCTCCGCCGG CCCGAGGGCG chr17:997110-997610 + 62 8.92e-05 GCGCTGGCCT GCGTGGGAGGTGAGGCCGGGCG ATGGGACCCT chr12:12266900-12267400 - 6 9.79e-05 CCCTTCCCTG GCCGTACAGGAGGCAGTACCGG GAGAA chr5:69492370-69492870 + 59 9.79e-05 CCAGGTCCAG AGCGCCGAGGAGCCGGTCTAGG ACGCAGCAGG chr14:93207106-93207606 + 1 9.79e-05 . GGCGCCGCTGGGCGGCAGTCGG AGCTGGAGCC chr17:46193709-46194209 - 47 9.79e-05 GCTGGCTGCT AGGGACAAAGGGCGGGCGGCGG AAGCCGCTTC chr17:77281389-77281889 + 68 9.79e-05 CGGAGCTGAG CGAGTCCCCGCGGCGGGCACAC TGCAGGTCGA chr3:161104593-161105093 + 58 9.79e-05 CCCGGATTTG ACGGTGGCTGGAGCGGCACGGG CGACGCAAGG chr1:155244582-155245082 + 31 1.07e-04 agagcgagag agcgagcgagagagagcgagag agcgagagag chr17:1715976-1716476 + 11 1.07e-04 CGTCCGCTCC CCACGGCCGGCGGCGCTGTCTC TTCTCGGCAC chr17:38751633-38752133 + 66 1.07e-04 AATGGGAGCG AGCCTGGACGGCGCAGACGCCG TAAGAGATGC chr15:70098540-70099040 - 45 1.07e-04 GAGGAGCCCG CGCGGCGAGGCTGCGTCGAGGG TGAAGTTGTG chr3:11846575-11847075 + 72 1.41e-04 AGCCCAGATA GGCTCGGGTGGGCGGCGGTCGC ACAGGCA chr2:168890076-168890576 - 60 1.41e-04 GCGCGGATCT GGTGTGGGGAAGGCGGCGGGAC TCAGGCCTGC chr6:169751197-169751697 - 33 1.54e-04 GAGATGGAGA AGCGAGGCCGAGGCGTGAAGTC GAGCCCCATC chr4:189940538-189941038 - 56 1.54e-04 GGGTTTCTGC CGGGGAGCTACGGCGGCCGCAG AGGGCCAAAA chr15:70100540-70101040 - 53 1.68e-04 TCTGCAAAAC CGCGTCGGGGACACGCAGCCGC GAACTCCTCC chr17:45149868-45150368 + 71 1.68e-04 GCGGCTGGGT GGCGACGACGCGCGTGTGCGGG AGCTGGAG chr6:31619985-31620485 - 38 1.83e-04 AAGAGAGAGA GGACGGGGGCTGGCGGGCGGGA TTAGCTGCCG chr19:40090497-40090997 - 67 1.99e-04 GAGTAGGAAC CCGGGGGTGCAGACGGGATCTG CCGGATCCCC chr6:28923642-28924142 - 20 2.17e-04 CTGCCCCACT AGCGTGGCCGCGAGCCTCGGTG AGCCGGCCGT chr17:36535148-36535648 + 77 2.17e-04 CATGATGGGC GGAGACGCGCGGAATCGGCCGG CC chr17:46267109-46267609 + 34 2.56e-04 GATAGTGCAT GACGTGGACGTGCTGGGCGCGG GCATCTGGCT chr19:39996623-39997123 - 20 2.78e-04 ACCCTGAGGC CGAGTGCGTGCGGGACTGGGCG ATAGCTCCGC chr3:9398122-9398622 - 58 2.78e-04 TCTGTCACAA GGCCGCGAGAACGGGGGTAGGG AGTGGGGGAT chr6:28898029-28898529 - 28 3.02e-04 TACAAAAATT AGCCGGGCGTCGTGACGGGCGC CTATAGTCCC chr6:31652055-31652555 - 7 3.27e-04 GCTGGAACAC CGTGGGAAGGCAGTAGACGCGG GCAGTC chr6:33391693-33392193 + 1 3.55e-04 . CGCGAGCGGGCGAGAGAACGCG AGTCCCAGGA chr8:143598008-143598508 - 64 6.07e-04 CCAGGAACCA GGCGTACACGGCGCGGTCGATC TCCTCCTCGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VGSGGGGMGGRGGSGGGSRSGG MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:1309395-1309895 8.4e-10 25_[+8]_53 chr22:35840406-35840906 9.4e-09 51_[+8]_27 chr5:71455477-71455977 1.4e-08 31_[+8]_47 chr17:37358653-37359153 1.7e-08 65_[-8]_13 chr17:38464837-38465337 1.7e-08 61_[+8]_17 chr6:30686985-30687485 2.5e-08 26_[+8]_52 chr17:36545475-36545975 8.7e-08 4_[+8]_74 chr6:31620689-31621189 1.7e-07 30_[+8]_48 chr8:143597227-143597727 2e-07 45_[+8]_33 chr17:45783168-45783668 2.3e-07 [+8]_78 chr6:32175693-32176193 5.7e-07 67_[+8]_11 chr19:40602072-40602572 7.7e-07 14_[+8]_64 chr19:39410047-39410547 7.7e-07 22_[-8]_56 chr1:2546383-2546883 7.7e-07 34_[+8]_44 chr19:56478015-56478515 7.7e-07 1_[+8]_77 chr1:155261969-155262469 8.9e-07 1_[-8]_77 chr6:30556243-30556743 8.9e-07 33_[+8]_45 chr17:38730531-38731031 8.9e-07 66_[-8]_12 chr6:148863984-148864484 8.9e-07 22_[-8]_56 chr6:30647266-30647766 1e-06 1_[+8]_77 chr1:210292345-210292845 1.2e-06 36_[+8]_42 chr19:36418411-36418911 1.2e-06 58_[+8]_20 chr10:3785798-3786298 1.3e-06 39_[-8]_39 chr6:31971796-31972296 1.5e-06 64_[+8]_14 chr9:133356474-133356974 1.5e-06 18_[+8]_60 chr5:69369340-69369840 1.8e-06 2_[+8]_76 chr14:100239298-10023979 1.8e-06 70_[+8]_8 chr16:4402497-4402997 3e-06 51_[-8]_27 chr6:33161580-33162080 3e-06 27_[+8]_51 chr17:35809283-35809783 3.4e-06 4_[-8]_74 chr19:12156297-12156797 3.4e-06 14_[-8]_64 chr17:38606285-38606785 3.4e-06 37_[-8]_41 chr22:23857061-23857561 3.8e-06 20_[+8]_58 chr1:998054-998554 3.8e-06 19_[+8]_59 chr6:31158488-31158988 4.3e-06 44_[+8]_34 chr3:44761551-44762051 4.9e-06 60_[+8]_18 chr17:48023670-48024170 4.9e-06 71_[-8]_7 chr19:34171949-34172449 5.6e-06 76_[-8]_2 chr19:18433015-18433515 5.6e-06 6_[-8]_72 chr17:8123983-8124483 5.6e-06 54_[+8]_24 chr19:36418207-36418707 6.3e-06 27_[+8]_51 chr6:31403521-31404021 6.3e-06 6_[+8]_72 chr5:88683599-88684099 6.3e-06 54_[-8]_24 chr6:33454284-33454784 6.3e-06 77_[+8]_1 chr17:81393039-81393539 6.3e-06 53_[+8]_25 chr9:133336027-133336527 7.1e-06 59_[+8]_19 chr19:40602294-40602794 7.1e-06 66_[-8]_12 chr1:41432629-41433129 8e-06 61_[-8]_17 chr6:128520228-128520728 9e-06 19_[+8]_59 chr10:74825715-74826215 1e-05 3_[+8]_75 chr12:11171202-11171702 1.1e-05 43_[-8]_35 chr6:33454078-33454578 1.1e-05 44_[-8]_34 chr6:29553442-29553942 1.1e-05 68_[-8]_10 chr4:48906456-48906956 1.1e-05 68_[-8]_10 chr19:53537575-53538075 1.1e-05 8_[+8]_70 chr6:29748557-29749057 1.1e-05 5_[-8]_73 chrX:155881278-155881778 1.1e-05 49_[+8]_29 chr6:30557066-30557566 1.3e-05 18_[-8]_60 chr6:32153949-32154449 1.3e-05 14_[-8]_64 chr19:34254117-34254617 1.4e-05 78_[-8] chr1:153775684-153776184 1.4e-05 [+8]_78 chr17:64661067-64661567 1.4e-05 31_[+8]_47 chr19:39833787-39834287 1.6e-05 8_[-8]_70 chr6:28866475-28866975 1.6e-05 65_[-8]_13 chr16:425155-425655 1.6e-05 51_[-8]_27 chr6:33208196-33208696 1.6e-05 14_[-8]_64 chr6:170306683-170307183 1.8e-05 38_[-8]_40 chr19:39824025-39824525 1.8e-05 67_[-8]_11 chr6:32583834-32584334 1.8e-05 48_[-8]_30 chr6:28814080-28814580 1.8e-05 74_[+8]_4 chr8:143578257-143578757 1.8e-05 28_[+8]_50 chr1:234607223-234607723 1.8e-05 [+8]_78 chr6:31399508-31400008 1.8e-05 19_[+8]_59 chr1:155250584-155251084 1.8e-05 41_[+8]_37 chr17:38747479-38747979 2e-05 27_[-8]_51 chr6:30345071-30345571 2.2e-05 11_[-8]_67 chr1:120197207-120197707 2.2e-05 [+8]_78 chr6:29942393-29942893 2.2e-05 27_[+8]_51 chr19:48716680-48717180 2.2e-05 24_[-8]_54 chr22:23893873-23894373 2.4e-05 5_[-8]_73 chr6:31958944-31959444 2.4e-05 77_[+8]_1 chr11:3057504-3058004 2.7e-05 17_[+8]_61 chr18:79570407-79570907 2.7e-05 18_[+8]_60 chr19:34359200-34359700 3e-05 71_[-8]_7 chr6:29628530-29629030 3e-05 49_[-8]_29 chr6:33425648-33426148 3e-05 45_[+8]_33 chr22:46080009-46080509 3e-05 71_[+8]_7 chr19:34359417-34359917 3.3e-05 43_[-8]_35 chr12:12349930-12350430 3.3e-05 71_[-8]_7 chr17:38559276-38559776 3.3e-05 67_[+8]_11 chr6:33271813-33272313 3.3e-05 12_[-8]_66 chr6:32894585-32895085 3.3e-05 50_[-8]_28 chr17:1684581-1685081 3.3e-05 46_[-8]_32 chr1:17212645-17213145 3.7e-05 73_[-8]_5 chr6:30914168-30914668 4.1e-05 54_[+8]_24 chr6:33391896-33392396 4.1e-05 49_[+8]_29 chr6:165660830-165661330 4.1e-05 2_[-8]_76 chr12:12356974-12357474 4.5e-05 39_[-8]_39 chr6:28838804-28839304 4.5e-05 7_[+8]_71 chr6:31806489-31806989 4.5e-05 74_[+8]_4 chr16:14974949-14975449 4.5e-05 23_[-8]_55 chr12:12267105-12267605 4.5e-05 69_[-8]_9 chr1:243254883-243255383 4.5e-05 30_[-8]_48 chr6:30647465-30647965 4.5e-05 37_[-8]_41 chr6:30571292-30571792 4.5e-05 30_[+8]_48 chr6:31197070-31197570 5e-05 34_[-8]_44 chr9:133348088-133348588 5e-05 7_[-8]_71 chr6:31795951-31796451 5e-05 19_[+8]_59 chr17:17783993-17784493 5e-05 31_[+8]_47 chr16:526934-527434 5e-05 65_[-8]_13 chr15:30903606-30904106 5.5e-05 28_[+8]_50 chr18:79678981-79679481 6.1e-05 3_[+8]_75 chr16:4425763-4426263 6.1e-05 69_[-8]_9 chr9:133239036-133239536 6.1e-05 54_[-8]_24 chr5:69559952-69560452 6.1e-05 35_[+8]_43 chr3:38138520-38139020 6.1e-05 17_[-8]_61 chr6:31271721-31272221 6.7e-05 1_[-8]_77 chr5:132294874-132295374 6.7e-05 21_[-8]_57 chr18:62890329-62890829 7.4e-05 14_[-8]_64 chr1:144551745-144552245 8.1e-05 36_[-8]_42 chr6:30678904-30679404 8.1e-05 54_[-8]_24 chr17:997110-997610 8.9e-05 61_[+8]_17 chr12:12266900-12267400 9.8e-05 5_[-8]_73 chr5:69492370-69492870 9.8e-05 58_[+8]_20 chr14:93207106-93207606 9.8e-05 [+8]_78 chr17:46193709-46194209 9.8e-05 46_[-8]_32 chr17:77281389-77281889 9.8e-05 67_[+8]_11 chr3:161104593-161105093 9.8e-05 57_[+8]_21 chr1:155244582-155245082 0.00011 30_[+8]_48 chr17:1715976-1716476 0.00011 10_[+8]_68 chr17:38751633-38752133 0.00011 65_[+8]_13 chr15:70098540-70099040 0.00011 44_[-8]_34 chr3:11846575-11847075 0.00014 71_[+8]_7 chr2:168890076-168890576 0.00014 59_[-8]_19 chr6:169751197-169751697 0.00015 32_[-8]_46 chr4:189940538-189941038 0.00015 55_[-8]_23 chr15:70100540-70101040 0.00017 52_[-8]_26 chr17:45149868-45150368 0.00017 70_[+8]_8 chr6:31619985-31620485 0.00018 37_[-8]_41 chr19:40090497-40090997 0.0002 66_[-8]_12 chr6:28923642-28924142 0.00022 19_[-8]_59 chr17:36535148-36535648 0.00022 76_[+8]_2 chr17:46267109-46267609 0.00026 33_[+8]_45 chr19:39996623-39997123 0.00028 19_[-8]_59 chr3:9398122-9398622 0.00028 57_[-8]_21 chr6:28898029-28898529 0.0003 27_[-8]_51 chr6:31652055-31652555 0.00033 6_[-8]_72 chr6:33391693-33392193 0.00035 [+8]_78 chr8:143598008-143598508 0.00061 63_[-8]_15 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VGSGGGGMGGRGGSGGGSRSGG MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF VGSGGGGMGGRGGSGGGSRSGG width=22 seqs=149 chr1:1309395-1309895 ( 26) AGCGGGGAGGGGGCGGGCAGGC 1 chr22:35840406-35840906 ( 52) AGGGGGGAGGAGGTAGGGAGGG 1 chr5:71455477-71455977 ( 32) AGAGAGGAGGAGGCGGCGGCGG 1 chr17:37358653-37359153 ( 66) GGAGGGGCGGCGGCAGGCAGGG 1 chr17:38464837-38465337 ( 62) GGGTGGGCGGAGGCGGGCTGGG 1 chr6:30686985-30687485 ( 27) GGAGGGGAGGAGGGAGGGAGAG 1 chr17:36545475-36545975 ( 5) AGCTGGGAGGAGGTGGTGACGG 1 chr6:31620689-31621189 ( 31) GCGGTGGCGGCGGCGGCGGCGG 1 chr8:143597227-143597727 ( 46) CGGGGGCCCGGGGGGGGGACGC 1 chr17:45783168-45783668 ( 1) GGCCGGGAGGGGGCGCTGTGTC 1 chr6:32175693-32176193 ( 68) GGAGGGGAGGTGGGAGTGGGAG 1 chr19:40602072-40602572 ( 15) GGGGCGGAGGGGACAGGAGGTG 1 chr19:39410047-39410547 ( 23) AGGGAGGAGGGAGGAGTGCGGG 1 chr1:2546383-2546883 ( 35) AGCCTGGCGGGGGTGGCGGCAG 1 chr19:56478015-56478515 ( 2) AGGGACGAGGAGGGGCGGACAG 1 chr1:155261969-155262469 ( 2) GGCGTGGAGGGCAGAGGGCCGC 1 chr6:30556243-30556743 ( 34) GGCGGCGAGGAAGGAGGCGCGC 1 chr17:38730531-38731031 ( 67) GGAGGGGAGGATGGGGGGACTC 1 chr6:148863984-148864484 ( 23) AGCCAGGCTGGGGGAGGGGCGC 1 chr6:30647266-30647766 ( 2) AGCGGGAGGGAGGCGCTGCCGG 1 chr1:210292345-210292845 ( 37) GGGTGGGAGGGGACGCGAAGAG 1 chr19:36418411-36418911 ( 59) GGAGGGCCGGGCGCGCTCACGG 1 chr10:3785798-3786298 ( 40) AGGGGGACGGAGACGGGCTCAG 1 chr6:31971796-31972296 ( 65) CCCGGGGCGGGGGAGGTGTGAG 1 chr9:133356474-133356974 ( 19) GGAGTGGCGGAGAAGGGCGCAG 1 chr5:69369340-69369840 ( 3) AGGGAGGAGCCGGAAGGGGCGG 1 chr14:100239298-10023979 ( 71) CGCGAGGAGGTGGTGGGCGGCG 1 chr16:4402497-4402997 ( 52) GCCGGGGAGGACGCGGCCTCTG 1 chr6:33161580-33162080 ( 28) CGGGGAGGAGGGGCGGGGGCGC 1 chr17:35809283-35809783 ( 5) GGCGGCGCGGCGGCCGGAGCTG 1 chr19:12156297-12156797 ( 15) CCCGAGACGGGGGAGGGGCCGG 1 chr17:38606285-38606785 ( 38) AGCGGGGGCGAGGCGGCGGCCC 1 chr22:23857061-23857561 ( 21) GGGGACGAGGGGCCAGAGCCGG 1 chr1:998054-998554 ( 20) CCGGGGCAGGGGAGGCTGCGGG 1 chr6:31158488-31158988 ( 45) AACGGGGCTGGGGCGGAGTGGG 1 chr3:44761551-44762051 ( 61) CGGGAGGTGGAGGCACCGGCTG 1 chr17:48023670-48024170 ( 72) AGGCCGGAGCCGGCGGGCGCGG 1 chr19:34171949-34172449 ( 77) GGGCTGGAGAGGAGGCGCGCGG 1 chr19:18433015-18433515 ( 7) ACGTGGGCGGGAGCAGGGACGC 1 chr17:8123983-8124483 ( 55) GGAGTGAAGGGGGGAGGGGAAG 1 chr19:36418207-36418707 ( 28) CCCGGGCCTGAGGCGCGGGCTC 1 chr6:31403521-31404021 ( 7) GGCGGAGCGGGAGCAGTGGGAC 1 chr5:88683599-88684099 ( 55) AGAGAGCAGAGGGAGGGGGCAG 1 chr6:33454284-33454784 ( 78) GGCGGGGAGGCGGCGGCTTCCG 1 chr17:81393039-81393539 ( 54) CGCGGGGCCGGGACCCGGAGGC 1 chr9:133336027-133336527 ( 60) AGCGGCGCGCGGGGCGGGGCGC 1 chr19:40602294-40602794 ( 67) GAAGGGGAGGAGAGAGGGAGTG 1 chr1:41432629-41433129 ( 62) GGCCAGCAGGGGGCGCTGCAGC 1 chr6:128520228-128520728 ( 20) CGCGGGGTGAGGACGGTGAGAG 1 chr10:74825715-74826215 ( 4) GGACGGGACGGGAGAGAGGGTG 1 chr12:11171202-11171702 ( 44) GGCGAGCAGGGTGCGGGAGAGC 1 chr6:33454078-33454578 ( 45) CGGTCGGAGGGGGTGGGCCGTC 1 chr6:29553442-29553942 ( 69) GGCGGGGCGCGCACAGCGGCCG 1 chr4:48906456-48906956 ( 69) AGCGGGCCGGCGGTGCAGTCAC 1 chr19:53537575-53538075 ( 9) GGAGGGAAAGGGATGGGAGGGG 1 chr6:29748557-29749057 ( 6) GGGGTGCGGGGAGTGGACGCGG 1 chrX:155881278-155881778 ( 50) GGGGTGGAGCGAGGAGGCAGTG 1 chr6:30557066-30557566 ( 19) AGTGAGGAAGGGGCACGCGGGG 1 chr6:32153949-32154449 ( 15) CGGTGGCGGGGGGAAGGGTGAG 1 chr19:34254117-34254617 ( 79) AGCGGGACGGCCGGGGCGGAGG 1 chr1:153775684-153776184 ( 1) GGCGAGCGGGCAGCGCCGGGAG 1 chr17:64661067-64661567 ( 32) CGGTGGCCGGCGGCGGGGAGTA 1 chr19:39833787-39834287 ( 9) GGCGCGGGGACGGGTGGGGCGG 1 chr6:28866475-28866975 ( 66) GGGTGGGCGTGGGCTCGGCGGG 1 chr16:425155-425655 ( 52) CGGGACGCGGGGGTGCTCCGAG 1 chr6:33208196-33208696 ( 15) GGCGCGGGTGGGACGGGACGTG 1 chr6:170306683-170307183 ( 39) CGAGGGGCTGACGCGCGCGAGG 1 chr19:39824025-39824525 ( 68) AGGCGGCATGGAACGCGGTGGG 1 chr6:32583834-32584334 ( 49) GCATGGCCGCGGGCGGGGCCTG 1 chr6:28814080-28814580 ( 75) GGGTGGGCCGGAAGGCGGAGTG 1 chr8:143578257-143578757 ( 29) ACCCGGGATGGGGTGGGGGATG 1 chr1:234607223-234607723 ( 1) GGCTGGCAGGGTGCACTGGCTC 1 chr6:31399508-31400008 ( 20) GGACGCGAGGCGGCGCTGTCAC 1 chr1:155250584-155251084 ( 42) GGGCGGCAGGGGGCGCTGTGTA 1 chr17:38747479-38747979 ( 28) GGGGCGCCGTGGACGCGCGGGG 1 chr6:30345071-30345571 ( 12) GGGCGGCCTGCGGGAGGGGAGC 1 chr1:120197207-120197707 ( 1) CGCGCGGAGGGCTGGGGCCCGG 1 chr6:29942393-29942893 ( 28) GGGCGGGTGAGTGCGGGGTCGG 1 chr19:48716680-48717180 ( 25) AGGGAGCAGGCGGGAGGCCCGA 1 chr22:23893873-23894373 ( 6) GCCGGGGGTGGGGATGCGGCGG 1 chr6:31958944-31959444 ( 78) GGAGGGGAGGGAAATGGAACGG 1 chr11:3057504-3058004 ( 18) GGCGGCCTCGGGACAGGGTGTG 1 chr18:79570407-79570907 ( 19) GGGTGGGTGAGGATGGGGACGC 1 chr19:34359200-34359700 ( 72) GCGCAGGCGCGGATGGGGCGGG 1 chr6:29628530-29629030 ( 50) GGGCGGCAGGGTGCTGGGAGAC 1 chr6:33425648-33426148 ( 46) GGCGAGCATGGTACGGCGGCCG 1 chr22:46080009-46080509 ( 72) GGCGGGGCTGAGCTGCAGCGGC 1 chr19:34359417-34359917 ( 44) CGGGAGCGGGGCGTGGCGTGGC 1 chr12:12349930-12350430 ( 72) CGCCAGGCCGGTGCGGGAGCTG 1 chr17:38559276-38559776 ( 68) AGGTGGGCGTTGGTGGGGCGGG 1 chr6:33271813-33272313 ( 13) AGCTTCCAGGAGGAAGAGGCGG 1 chr6:32894585-32895085 ( 51) AGGCGGCGGGAGGCGCGAACAC 1 chr17:1684581-1685081 ( 47) CGCGGAGCGGACGCAGTCTGGC 1 chr1:17212645-17213145 ( 74) GGAGGCCTAGGGAGGGTGGCGG 1 chr6:30914168-30914668 ( 55) GGCTTGGCCGCGCCGGGCTGTG 1 chr6:33391896-33392396 ( 50) GCGGAGGCAGGAGTGGAGACGG 1 chr6:165660830-165661330 ( 3) CGCTAGAAGGAAGCAGGCAGGC 1 chr12:12356974-12357474 ( 40) GGCGCGGCGCGAACGCACGCGG 1 chr6:28838804-28839304 ( 8) AGCGAGGAAGAGGAGCACCCGC 1 chr6:31806489-31806989 ( 75) GGCGCCGCGGGCAGCGGGCCGG 1 chr16:14974949-14975449 ( 24) AGGCGGCCGGTGGTGGCCTGGC 1 chr12:12267105-12267605 ( 70) GCCCTGCCGGCGGCGGCCGCAC 1 chr1:243254883-243255383 ( 31) GACGACGACGAGGTGGGGGGAG 1 chr6:30647465-30647965 ( 38) CGAGTGCAAGACGGGCGGGCTG 1 chr6:30571292-30571792 ( 31) CGAGTGGATCGGGGACGGAGAG 1 chr6:31197070-31197570 ( 35) GGCTTGAACGCGGGAGGCGGAG 1 chr9:133348088-133348588 ( 8) CGCCTGGAGGAGGATGGCAGCG 1 chr6:31795951-31796451 ( 20) AGGGTGACGGCCGGGCGCAGTG 1 chr17:17783993-17784493 ( 32) ACGGGGACTGGGAGGGGCTGGC 1 chr16:526934-527434 ( 66) GGCGGCCAAGAGCGGCGGTGGC 1 chr15:30903606-30904106 ( 29) CGAGACGCGGGGATCGGCTGGG 1 chr18:79678981-79679481 ( 4) CGCGGGCCGAGGGCGGCGCACC 1 chr16:4425763-4426263 ( 70) CGGGGGCCGCAAGAGGTCAGGG 1 chr9:133239036-133239536 ( 55) CCCGGGGTAAGGGCGGGCGCTG 1 chr5:69559952-69560452 ( 36) GGCGGAGAGGAGTGTCGGGCTG 1 chr3:38138520-38139020 ( 18) AGGGAGGATGTGGAGGAGACCG 1 chr6:31271721-31272221 ( 2) CCCGGCGAGGGCGCAGGACCCG 1 chr5:132294874-132295374 ( 22) AGGGGGAGGGGAGCGCTGACCC 1 chr18:62890329-62890829 ( 15) GGCTTGGCGGAGTGGCTCACGC 1 chr1:144551745-144552245 ( 37) CGCGGGGAAGTGACCGTGCGTG 1 chr6:30678904-30679404 ( 55) GGGTAAGCGGAGGCTCCGCCGG 1 chr17:997110-997610 ( 62) GCGTGGGAGGTGAGGCCGGGCG 1 chr12:12266900-12267400 ( 6) GCCGTACAGGAGGCAGTACCGG 1 chr5:69492370-69492870 ( 59) AGCGCCGAGGAGCCGGTCTAGG 1 chr14:93207106-93207606 ( 1) GGCGCCGCTGGGCGGCAGTCGG 1 chr17:46193709-46194209 ( 47) AGGGACAAAGGGCGGGCGGCGG 1 chr17:77281389-77281889 ( 68) CGAGTCCCCGCGGCGGGCACAC 1 chr3:161104593-161105093 ( 58) ACGGTGGCTGGAGCGGCACGGG 1 chr1:155244582-155245082 ( 31) AGCGAGCGAGAGAGAGCGAGAG 1 chr17:1715976-1716476 ( 11) CCACGGCCGGCGGCGCTGTCTC 1 chr17:38751633-38752133 ( 66) AGCCTGGACGGCGCAGACGCCG 1 chr15:70098540-70099040 ( 45) CGCGGCGAGGCTGCGTCGAGGG 1 chr3:11846575-11847075 ( 72) GGCTCGGGTGGGCGGCGGTCGC 1 chr2:168890076-168890576 ( 60) GGTGTGGGGAAGGCGGCGGGAC 1 chr6:169751197-169751697 ( 33) AGCGAGGCCGAGGCGTGAAGTC 1 chr4:189940538-189941038 ( 56) CGGGGAGCTACGGCGGCCGCAG 1 chr15:70100540-70101040 ( 53) CGCGTCGGGGACACGCAGCCGC 1 chr17:45149868-45150368 ( 71) GGCGACGACGCGCGTGTGCGGG 1 chr6:31619985-31620485 ( 38) GGACGGGGGCTGGCGGGCGGGA 1 chr19:40090497-40090997 ( 67) CCGGGGGTGCAGACGGGATCTG 1 chr6:28923642-28924142 ( 20) AGCGTGGCCGCGAGCCTCGGTG 1 chr17:36535148-36535648 ( 77) GGAGACGCGCGGAATCGGCCGG 1 chr17:46267109-46267609 ( 34) GACGTGGACGTGCTGGGCGCGG 1 chr19:39996623-39997123 ( 20) CGAGTGCGTGCGGGACTGGGCG 1 chr3:9398122-9398622 ( 58) GGCCGCGAGAACGGGGGTAGGG 1 chr6:28898029-28898529 ( 28) AGCCGGGCGTCGTGACGGGCGC 1 chr6:31652055-31652555 ( 7) CGTGGGAAGGCAGTAGACGCGG 1 chr6:33391693-33392193 ( 1) CGCGAGCGGGCGAGAGAACGCG 1 chr8:143598008-143598508 ( 64) GGCGTACACGGCGCGGTCGATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VGSGGGGMGGRGGSGGGSRSGG MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 9.7391 E= 8.7e-037 15 -2 88 -1386 -317 -88 169 -1386 -52 88 38 -358 -1386 -62 142 -78 -12 -168 100 -41 -217 -68 160 -1386 -147 2 133 -1386 88 54 -102 -217 -158 -118 139 -92 -171 -157 165 -317 12 -46 92 -200 -108 -118 147 -217 -4 -195 138 -317 -136 88 16 -78 8 -246 129 -185 -1386 19 142 -417 -117 -68 107 -36 -126 19 119 -417 -4 -41 61 -47 -185 94 75 -1386 -41 -146 100 -21 -317 19 139 -1386 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VGSGGGGMGGRGGSGGGSRSGG MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 149 E= 8.7e-037 0.268456 0.255034 0.476510 0.000000 0.026846 0.140940 0.832215 0.000000 0.167785 0.476510 0.335570 0.020134 0.000000 0.167785 0.691275 0.140940 0.221477 0.080537 0.516779 0.181208 0.053691 0.161074 0.785235 0.000000 0.087248 0.261745 0.651007 0.000000 0.442953 0.375839 0.127517 0.053691 0.080537 0.114094 0.677852 0.127517 0.073826 0.087248 0.812081 0.026846 0.261745 0.187919 0.489933 0.060403 0.114094 0.114094 0.718121 0.053691 0.234899 0.067114 0.671141 0.026846 0.093960 0.476510 0.288591 0.140940 0.255034 0.046980 0.630872 0.067114 0.000000 0.295302 0.691275 0.013423 0.107383 0.161074 0.543624 0.187919 0.100671 0.295302 0.590604 0.013423 0.234899 0.194631 0.395973 0.174497 0.067114 0.496644 0.436242 0.000000 0.181208 0.093960 0.516779 0.208054 0.026846 0.295302 0.677852 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif VGSGGGGMGGRGGSGGGSRSGG MEME-8 regular expression -------------------------------------------------------------------------------- [GAC]G[CG]G[GA]G[GC][AC]GG[GA]G[GA][CG][GA][GC]G[GC][GA][CG][GT][GC] -------------------------------------------------------------------------------- Time 2516.51 secs. ******************************************************************************** ******************************************************************************** MOTIF GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG MEME-9 width = 50 sites = 7 llr = 331 E-value = 1.0e-032 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG MEME-9 Description -------------------------------------------------------------------------------- Simplified A :::::9::9:::::1393::9::::11::619:963::1:::::1:1::: pos.-specific C :1711::::a9a3971::aa1::3:6:1:1:1::::9:731:4::9:a6: probability G 9916:1aa::1::1:6:7:::aa:a:79a11:313:::16:a6:7:9::a matrix T 1:139:::1:::7:1:1::::::7:31::17:7:171a:19::a11::4: bits 2.1 ** * * ** ** * * * * * * * 1.8 ** * * ** ** * * * * * * * 1.6 ** * * ** ** * * * * * * * 1.4 ** ******** * * ***** * ** * * ** ** * *** * Relative 1.2 ** ********** * ******* ** *** *** ** * *** * Entropy 1.0 ** ********** ********* ** *** *** **** ***** (68.2 bits) 0.8 *** *********** ********* *** **** **** ********** 0.6 ***************************** ******************** 0.4 ************************************************** 0.2 ************************************************** 0.0 -------------------------------------------------- Multilevel GGCGTAGGACCCTCCGAGCCAGGTGCGGGATATAATCTCGTGGTGCGCCG consensus T C A A C T G GA C C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------------------------------------- chr5:131312398-131312898 + 2 5.74e-29 g ggcgtaggaccctccgagccaggcgcgggatataatctcgtggtgcgctg ttttttaagc chr4:120256193-120256693 + 20 3.18e-28 agactccgtg ggcttaggaccctccaagccaggtgtgggatataatctcgtggtgcgccg ttttttaagc chr5:90668068-90668568 + 2 5.95e-26 g ggtgtaggaccctctgagccaggtgcggggtataatctcgtggtgcgccg ttttttaagc chr10:35858741-35859241 - 46 8.99e-26 GCGTG GGCGTAGGACCCTCCGAGCCAGGTGCAGGATATAGTCTCCTGGTGTGCCG TTTTTTAAGC chr7:76728589-76729089 - 12 2.41e-24 AGACTCTGTG GGCGTAGGACCCTCCCTGCCAGGTGTGGGATATAAACTCGCGCTGCGCCG TTTTTTAAGC chr6:30345071-30345571 + 44 3.02e-17 ATTGTGTCCT TGCCCAGGACCCCGAGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTG AGAGGAC chr6:30213001-30213501 + 27 6.99e-17 CCCGGCGGCT GCGTTGGGTCGCCCCAAACCCGGTGAGCGTACGAGACTGTTGCTTCGCTG TATGTCTCAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:131312398-131312898 5.7e-29 1_[+9]_49 chr4:120256193-120256693 3.2e-28 19_[+9]_31 chr5:90668068-90668568 5.9e-26 1_[+9]_49 chr10:35858741-35859241 9e-26 45_[-9]_5 chr7:76728589-76729089 2.4e-24 11_[-9]_39 chr6:30345071-30345571 3e-17 43_[+9]_7 chr6:30213001-30213501 7e-17 26_[+9]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG width=50 seqs=7 chr5:131312398-131312898 ( 2) GGCGTAGGACCCTCCGAGCCAGGCGCGGGATATAATCTCGTGGTGCGCTG 1 chr4:120256193-120256693 ( 20) GGCTTAGGACCCTCCAAGCCAGGTGTGGGATATAATCTCGTGGTGCGCCG 1 chr5:90668068-90668568 ( 2) GGTGTAGGACCCTCTGAGCCAGGTGCGGGGTATAATCTCGTGGTGCGCCG 1 chr10:35858741-35859241 ( 46) GGCGTAGGACCCTCCGAGCCAGGTGCAGGATATAGTCTCCTGGTGTGCCG 1 chr7:76728589-76729089 ( 12) GGCGTAGGACCCTCCCTGCCAGGTGTGGGATATAAACTCGCGCTGCGCCG 1 chr6:30345071-30345571 ( 44) TGCCCAGGACCCCGAGAACCAGGCGCTGGCGAGGTTTTACTGCTACACTG 1 chr6:30213001-30213501 ( 27) GCGTTGGGTCGCCCCAAACCCGGTGAGCGTACGAGACTGTTGCTTCGCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 50 n= 30600 bayes= 11.9374 E= 1.0e-032 -945 -945 173 -75 -945 -86 173 -945 -945 146 -86 -75 -945 -86 114 24 -945 -86 -945 183 183 -945 -86 -945 -945 -945 195 -945 -945 -945 195 -945 183 -945 -945 -75 -945 195 -945 -945 -945 173 -86 -945 -945 195 -945 -945 -945 14 -945 156 -945 173 -86 -945 -75 146 -945 -75 24 -86 114 -945 183 -945 -945 -75 24 -945 146 -945 -945 195 -945 -945 -945 195 -945 -945 183 -86 -945 -945 -945 -945 195 -945 -945 -945 195 -945 -945 14 -945 156 -945 -945 195 -945 -75 114 -945 24 -75 -945 146 -75 -945 -86 173 -945 -945 -945 195 -945 124 -86 -86 -75 -75 -945 -86 156 183 -86 -945 -945 -945 -945 14 156 183 -945 -86 -945 124 -945 14 -75 24 -945 -945 156 -945 173 -945 -75 -945 -945 -945 205 -75 146 -86 -945 -945 14 114 -75 -945 -86 -945 183 -945 -945 195 -945 -945 73 114 -945 -945 -945 -945 205 -75 -945 146 -75 -945 173 -945 -75 -75 -945 173 -945 -945 195 -945 -945 -945 114 -945 83 -945 -945 195 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 50 nsites= 7 E= 1.0e-032 0.000000 0.000000 0.857143 0.142857 0.000000 0.142857 0.857143 0.000000 0.000000 0.714286 0.142857 0.142857 0.000000 0.142857 0.571429 0.285714 0.000000 0.142857 0.000000 0.857143 0.857143 0.000000 0.142857 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.857143 0.000000 0.000000 0.142857 0.000000 1.000000 0.000000 0.000000 0.000000 0.857143 0.142857 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.285714 0.000000 0.714286 0.000000 0.857143 0.142857 0.000000 0.142857 0.714286 0.000000 0.142857 0.285714 0.142857 0.571429 0.000000 0.857143 0.000000 0.000000 0.142857 0.285714 0.000000 0.714286 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.857143 0.142857 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.285714 0.000000 0.714286 0.000000 0.000000 1.000000 0.000000 0.142857 0.571429 0.000000 0.285714 0.142857 0.000000 0.714286 0.142857 0.000000 0.142857 0.857143 0.000000 0.000000 0.000000 1.000000 0.000000 0.571429 0.142857 0.142857 0.142857 0.142857 0.000000 0.142857 0.714286 0.857143 0.142857 0.000000 0.000000 0.000000 0.000000 0.285714 0.714286 0.857143 0.000000 0.142857 0.000000 0.571429 0.000000 0.285714 0.142857 0.285714 0.000000 0.000000 0.714286 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 0.000000 1.000000 0.142857 0.714286 0.142857 0.000000 0.000000 0.285714 0.571429 0.142857 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 1.000000 0.000000 0.000000 0.428571 0.571429 0.000000 0.000000 0.000000 0.000000 1.000000 0.142857 0.000000 0.714286 0.142857 0.000000 0.857143 0.000000 0.142857 0.142857 0.000000 0.857143 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.571429 0.000000 0.428571 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGCKTAGGACCCTCCRAGCCAGGTGYGGGATATARTCTCSTGSTGCGCYG MEME-9 regular expression -------------------------------------------------------------------------------- GGC[GT]TAGGACCC[TC]CC[GA]A[GA]CCAGG[TC]G[CT]GGGATA[TG]A[AG][TA]CTC[GC]TG[GC]TGCGC[CT]G -------------------------------------------------------------------------------- Time 2780.98 secs. ******************************************************************************** ******************************************************************************** MOTIF AGYRAGACTCYRTCTC MEME-10 width = 16 sites = 28 llr = 403 E-value = 3.4e-030 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGYRAGACTCYRTCTC MEME-10 Description -------------------------------------------------------------------------------- Simplified A 8::3a3a:::131::: pos.-specific C :16::::9194::9:9 probability G 1816:8::::16:::: matrix T 1:3::::19:419:a: bits 2.1 * * 1.8 * * * 1.6 * * * 1.4 * **** **** Relative 1.2 * ****** **** Entropy 1.0 ** ****** **** (20.8 bits) 0.8 ** ******* ***** 0.6 ********** ***** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel AGCGAGACTCTGTCTC consensus TA A CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGYRAGACTCYRTCTC MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr10:35197186-35197686 - 85 5.14e-10 . AGCGAGACTCCGTCTC ATAAAATAAA chr19:29505709-29506209 + 1 7.44e-10 . agtgagactctgtctc aaaaataaat chr6:108155273-108155773 + 2 1.45e-09 g agcaagactctgtctc aaaaataaat chr12:122512978-12251347 + 1 1.95e-09 . agcaagactccgtctc aaaaataaat chr5:137302360-137302860 + 1 3.30e-09 . agtgagactccatctc aaaaaataaa chr5:115311219-115311719 - 82 4.01e-09 CAG AGCAAGACTCCATCTC AAAATAAATA chr7:158785209-158785709 + 1 5.33e-09 . agtgaaactccgtctc aaaataaata chr11:123279166-12327966 - 83 7.55e-09 AG AGCGAGACTCGGTCTC AGATAAATAA chr18:49514946-49515446 - 85 9.28e-09 . AGCAAGACTCAGTCTC AAAAATAAAT chr1:51493308-51493808 + 1 9.28e-09 . agcaagactcagtctc aaattaaata chr1:160300123-160300623 + 5 3.56e-08 tggg agtgagactccgactc aaaataaata chr19:46532338-46532838 - 67 4.64e-08 GGATGACAAA AGCGAAATTCTGTCTC AAAAATAAAT chr20:3554070-3554570 - 84 7.84e-08 G AGCGAGACTCCATTTC AAAATAAATA chr5:126819225-126819725 - 83 8.47e-08 AG GCTGAGACTCTGTCTC AAAAATAAAT chr5:109425484-109425984 - 75 1.33e-07 GGGCAACAAG AGCGAAACTCATTCTC CAAAAATAAA chr1:223840853-223841353 + 16 1.43e-07 tggccaatac agggaaaccctgtctc tactaaaaaa chr10:88419780-88420280 + 15 1.43e-07 gggcaacaag tgtgaaactccatctc aaaataaata chr1:230796106-230796606 + 2 1.66e-07 g tgggagactccatctc aaaaaTataa chr19:40103557-40104057 + 4 2.21e-07 aag agcaaagctctgtctc aaaataaata chr6:138525309-138525809 + 3 3.25e-07 ga agtgagaccttgtctc aaaataaata chr9:135985094-135985594 + 1 4.44e-07 . agtgagactccttgtc tcaaTaataa chr1:237000143-237000643 - 79 6.05e-07 CAATGT AGCAAGACCGTATCTC TAAATAAATA chr16:30642248-30642748 - 76 6.87e-07 TGCAGTCCA GCCTAGACTCTGTCTC AAAAATAAAT chr5:175559043-175559543 - 85 7.92e-07 . GCGAAGACTCCATCTC AAAATAAATA chr11:32925263-32925763 - 83 9.90e-07 AG AACAAGACTCTGTCTG CAAAAAATAA chr18:48717181-48717681 + 2 1.38e-06 g agcgaaaatctgtctt taaaaaataa chr6:27840523-27841023 + 1 1.99e-06 . ggtgagaccctacctc tTAaaataaa chr6:28589162-28589662 - 66 4.29e-06 GAAAGGTCCC ACCGAGATTCGAACTC GGATTGCTGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGYRAGACTCYRTCTC MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:35197186-35197686 5.1e-10 84_[-10] chr19:29505709-29506209 7.4e-10 [+10]_84 chr6:108155273-108155773 1.5e-09 1_[+10]_83 chr12:122512978-12251347 1.9e-09 [+10]_84 chr5:137302360-137302860 3.3e-09 [+10]_84 chr5:115311219-115311719 4e-09 81_[-10]_3 chr7:158785209-158785709 5.3e-09 [+10]_84 chr11:123279166-12327966 7.5e-09 82_[-10]_2 chr18:49514946-49515446 9.3e-09 84_[-10] chr1:51493308-51493808 9.3e-09 [+10]_84 chr1:160300123-160300623 3.6e-08 4_[+10]_80 chr19:46532338-46532838 4.6e-08 66_[-10]_18 chr20:3554070-3554570 7.8e-08 83_[-10]_1 chr5:126819225-126819725 8.5e-08 82_[-10]_2 chr5:109425484-109425984 1.3e-07 74_[-10]_10 chr1:223840853-223841353 1.4e-07 15_[+10]_69 chr10:88419780-88420280 1.4e-07 14_[+10]_70 chr1:230796106-230796606 1.7e-07 1_[+10]_83 chr19:40103557-40104057 2.2e-07 3_[+10]_81 chr6:138525309-138525809 3.3e-07 2_[+10]_82 chr9:135985094-135985594 4.4e-07 [+10]_84 chr1:237000143-237000643 6.1e-07 78_[-10]_6 chr16:30642248-30642748 6.9e-07 75_[-10]_9 chr5:175559043-175559543 7.9e-07 84_[-10] chr11:32925263-32925763 9.9e-07 82_[-10]_2 chr18:48717181-48717681 1.4e-06 1_[+10]_83 chr6:27840523-27841023 2e-06 [+10]_84 chr6:28589162-28589662 4.3e-06 65_[-10]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGYRAGACTCYRTCTC MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGYRAGACTCYRTCTC width=16 seqs=28 chr10:35197186-35197686 ( 85) AGCGAGACTCCGTCTC 1 chr19:29505709-29506209 ( 1) AGTGAGACTCTGTCTC 1 chr6:108155273-108155773 ( 2) AGCAAGACTCTGTCTC 1 chr12:122512978-12251347 ( 1) AGCAAGACTCCGTCTC 1 chr5:137302360-137302860 ( 1) AGTGAGACTCCATCTC 1 chr5:115311219-115311719 ( 82) AGCAAGACTCCATCTC 1 chr7:158785209-158785709 ( 1) AGTGAAACTCCGTCTC 1 chr11:123279166-12327966 ( 83) AGCGAGACTCGGTCTC 1 chr18:49514946-49515446 ( 85) AGCAAGACTCAGTCTC 1 chr1:51493308-51493808 ( 1) AGCAAGACTCAGTCTC 1 chr1:160300123-160300623 ( 5) AGTGAGACTCCGACTC 1 chr19:46532338-46532838 ( 67) AGCGAAATTCTGTCTC 1 chr20:3554070-3554570 ( 84) AGCGAGACTCCATTTC 1 chr5:126819225-126819725 ( 83) GCTGAGACTCTGTCTC 1 chr5:109425484-109425984 ( 75) AGCGAAACTCATTCTC 1 chr1:223840853-223841353 ( 16) AGGGAAACCCTGTCTC 1 chr10:88419780-88420280 ( 15) TGTGAAACTCCATCTC 1 chr1:230796106-230796606 ( 2) TGGGAGACTCCATCTC 1 chr19:40103557-40104057 ( 4) AGCAAAGCTCTGTCTC 1 chr6:138525309-138525809 ( 3) AGTGAGACCTTGTCTC 1 chr9:135985094-135985594 ( 1) AGTGAGACTCCTTGTC 1 chr1:237000143-237000643 ( 79) AGCAAGACCGTATCTC 1 chr16:30642248-30642748 ( 76) GCCTAGACTCTGTCTC 1 chr5:175559043-175559543 ( 85) GCGAAGACTCCATCTC 1 chr11:32925263-32925763 ( 83) AACAAGACTCTGTCTG 1 chr18:48717181-48717681 ( 2) AGCGAAAATCTGTCTT 1 chr6:27840523-27841023 ( 1) GGTGAGACCCTACCTC 1 chr6:28589162-28589662 ( 66) ACCGAGATTCGAACTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGYRAGACTCYRTCTC MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 12.0529 E= 3.4e-030 170 -1145 -86 -176 -275 -86 167 -1145 -1145 114 -127 41 41 -1145 131 -275 205 -1145 -1145 -1145 5 -1145 154 -1145 200 -1145 -285 -1145 -275 179 -1145 -176 -1145 -86 -1145 183 -1145 184 -285 -275 -117 60 -186 83 41 -1145 123 -176 -176 -285 -1145 189 -1145 184 -285 -275 -1145 -1145 -1145 205 -1145 184 -285 -275 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGYRAGACTCYRTCTC MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 28 E= 3.4e-030 0.785714 0.000000 0.142857 0.071429 0.035714 0.142857 0.821429 0.000000 0.000000 0.571429 0.107143 0.321429 0.321429 0.000000 0.642857 0.035714 1.000000 0.000000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.964286 0.000000 0.035714 0.000000 0.035714 0.892857 0.000000 0.071429 0.000000 0.142857 0.000000 0.857143 0.000000 0.928571 0.035714 0.035714 0.107143 0.392857 0.071429 0.428571 0.321429 0.000000 0.607143 0.071429 0.071429 0.035714 0.000000 0.892857 0.000000 0.928571 0.035714 0.035714 0.000000 0.000000 0.000000 1.000000 0.000000 0.928571 0.035714 0.035714 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGYRAGACTCYRTCTC MEME-10 regular expression -------------------------------------------------------------------------------- AG[CT][GA]A[GA]ACTC[TC][GA]TCTC -------------------------------------------------------------------------------- Time 3043.46 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:116657070-11665757 4.87e-28 2_[-4(1.35e-05)]_8_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_29 chr6:32969447-32969947 8.23e-01 100 chr5:78762706-78763206 5.59e-37 5_[-4(2.48e-10)]_9_[+1(1.05e-13)]_4_\ [+3(9.67e-12)]_23 chr6:28635117-28635617 9.98e-01 100 chr22:46080009-46080509 1.21e-01 19_[-5(3.69e-05)]_25_[+8(3.01e-05)]_\ 7 chr12:121911713-12191221 1.36e-01 100 chr7:139835818-139836318 3.19e-25 20_[+1(1.05e-13)]_3_[+1(1.05e-13)]_\ 35 chr5:101288475-101288975 3.25e-05 10_[-6(8.38e-06)]_59 chr8:629129-629629 1.23e-01 5_[-5(5.87e-06)]_12_[-5(4.74e-08)]_\ 29 chr1:15830587-15831087 9.73e-01 100 chr6:31958944-31959444 2.46e-01 77_[+8(2.44e-05)]_1 chr9:130700096-130700596 1.50e-33 24_[+7(1.21e-05)]_[-1(1.05e-13)]_4_\ [+2(1.30e-10)]_3_[-10(5.33e-09)]_4 chr17:42789440-42789940 3.43e-30 4_[-4(5.36e-07)]_8_[+1(1.05e-13)]_\ [+3(5.02e-11)]_29 chr17:45385404-45385904 9.94e-01 100 chr10:88419780-88420280 4.12e-30 14_[+10(1.43e-07)]_4_[+1(1.05e-13)]_\ 3_[+1(1.05e-13)]_3_[-2(5.72e-09)]_2 chr1:155250584-155251084 3.28e-01 41_[+8(1.77e-05)]_37 chr9:133356474-133356974 5.89e-01 18_[+8(1.54e-06)]_19_[+8(3.38e-06)]_\ 19 chr17:45371782-45372282 5.95e-01 100 chr17:43576038-43576538 3.16e-30 45_[-1(1.05e-13)]_[+2(2.59e-10)]_2_\ [-10(7.44e-10)] chr20:2579148-2579648 1.55e-26 14_[-3(1.37e-05)]_3_[-1(1.05e-13)]_\ 7_[-3(5.07e-12)]_11 chr5:68932807-68933307 7.11e-01 100 chr17:38606285-38606785 4.15e-01 37_[-8(3.38e-06)]_41 chr5:115311219-115311719 3.26e-30 1_[+7(3.07e-07)]_3_[+7(3.07e-07)]_4_\ [-1(1.05e-13)]_3_[-1(1.05e-13)]_4_[-10(4.01e-09)]_3 chr6:31197965-31198465 8.52e-01 100 chr17:36601450-36601950 8.42e-01 100 chr17:79801066-79801566 9.95e-01 100 chr18:62890329-62890829 6.69e-02 14_[-8(7.39e-05)]_64 chr22:23893873-23894373 5.54e-02 5_[-8(2.44e-05)]_73 chr19:40795139-40795639 2.32e-29 33_[-1(1.05e-13)]_[+2(2.59e-10)]_12_\ [+4(1.85e-06)]_2 chr3:161104593-161105093 9.22e-01 57_[+8(9.79e-05)]_21 chr15:30903606-30904106 8.71e-01 28_[+8(5.53e-05)]_50 chr5:118933655-118934155 8.23e-24 23_[+1(1.05e-13)]_3_[+1(3.16e-13)]_\ 18_[-7(7.55e-06)]_2 chr13:44823503-44824003 1.06e-28 32_[-1(1.05e-13)]_[+2(2.59e-10)]_13_\ [+4(1.07e-05)]_2 chr10:103359447-10335994 7.50e-25 11_[+1(1.05e-13)]_3_[+1(3.16e-13)]_\ 7_[+1(2.87e-05)]_16 chr13:100861667-10086216 2.69e-24 29_[-1(1.05e-13)]_3_[-1(5.26e-13)]_\ 26 chr12:12398290-12398790 9.29e-04 30_[+5(2.98e-05)]_14_[+7(4.61e-05)]_\ 17 chr1:998054-998554 2.77e-02 1_[-10(1.14e-05)]_7_[+8(2.62e-06)]_\ 54 chr7:158785209-158785709 1.30e-29 [+10(5.33e-09)]_4_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_35 chr16:30499824-30500324 4.80e-35 35_[-1(1.05e-13)]_1_[-3(3.72e-12)]_\ [-10(2.48e-10)]_5 chr2:131083643-131084143 8.22e-35 32_[-1(1.05e-13)]_3_[-1(5.26e-13)]_\ 6_[+4(7.44e-10)]_1 chr5:132294874-132295374 7.19e-01 21_[-8(6.71e-05)]_57 chr6:28896829-28897329 8.76e-01 100 chr10:35858741-35859241 2.46e-26 14_[+6(3.85e-15)]_[-9(8.99e-26)]_5 chr11:58905022-58905522 8.35e-01 100 chr8:143598008-143598508 2.06e-01 47_[-9(7.37e-06)]_3 chr1:234605923-234606423 3.71e-06 18_[+1(8.87e-07)]_61 chr1:226747788-226748288 1.88e-36 4_[+10(1.45e-09)]_5_[+1(1.05e-13)]_\ 3_[+1(3.16e-13)]_30 chr15:70098540-70099040 7.48e-01 100 chr3:181531705-181532205 1.01e-24 13_[-1(1.05e-13)]_3_[-1(1.05e-13)]_\ 8_[-1(2.81e-06)]_13 chr1:67536893-67537393 1.18e-31 1_[-4(1.22e-07)]_4_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_9_[+1(9.92e-05)]_4 chr12:31325841-31326341 9.20e-01 100 chrX:155881278-155881778 5.12e-01 49_[+8(1.13e-05)]_29 chr13:33246971-33247471 1.66e-36 5_[-4(7.44e-10)]_7_[+1(1.05e-13)]_\ [+1(1.05e-13)]_30 chr6:27840523-27841023 1.55e-27 [+10(1.99e-06)]_6_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_[+1(4.80e-06)]_12 chr2:20049916-20050416 3.62e-02 100 chr17:46225232-46225732 6.98e-03 34_[+8(6.71e-05)]_10_[+5(1.95e-06)]_\ 7 chr14:100239298-10023979 1.28e-01 70_[+8(1.76e-06)]_8 chr19:29505709-29506209 1.03e-30 [+10(7.44e-10)]_5_[+1(1.05e-13)]_3_\ [+1(3.16e-13)]_34 chr19:40717470-40717970 6.36e-01 100 chr6:31399508-31400008 4.86e-01 19_[+8(1.77e-05)]_10_[-8(6.71e-05)]_\ 27 chr11:119030480-11903098 5.98e-01 100 chr17:32176313-32176813 2.68e-36 32_[-1(1.05e-13)]_3_[-1(5.26e-13)]_\ [-10(1.45e-09)]_7 chr19:18106317-18106817 1.64e-33 25_[-1(1.05e-13)]_3_[-1(5.26e-13)]_\ 1_[-10(6.07e-09)]_13 chr1:161872502-161873002 2.09e-02 18_[-3(7.69e-05)]_46_[-7(6.16e-05)]_\ 2 chr12:49126995-49127495 9.69e-01 100 chr5:139370245-139370745 1.69e-35 28_[-1(1.05e-13)]_[+2(1.30e-10)]_5_\ [+4(7.44e-10)]_14 chr19:56478015-56478515 9.09e-02 1_[+8(7.68e-07)]_77 chr1:61235261-61235761 1.98e-27 5_[+1(1.05e-13)]_4_[+3(5.07e-14)]_4_\ [-7(4.83e-06)]_32 chr19:39389794-39390294 9.85e-01 100 chr10:17584323-17584823 8.34e-23 1_[+1(1.05e-13)]_78 chr5:36019525-36020025 5.47e-24 36_[-1(1.05e-13)]_3_[-1(1.05e-13)]_\ 19 chr17:46772065-46772565 8.66e-01 100 chr12:57207020-57207520 1.97e-32 6_[+10(1.25e-08)]_[+1(1.05e-13)]_\ [+3(5.02e-11)]_12_[+1(1.05e-13)]_2 chr22:23857061-23857561 7.17e-02 20_[+8(3.84e-06)]_58 chr17:48023670-48024170 1.91e-01 71_[-8(4.92e-06)]_7 chr19:35964354-35964854 2.36e-30 33_[-1(1.05e-13)]_4_[+2(1.30e-10)]_\ [-10(2.72e-07)]_10 chr17:8123983-8124483 2.80e-01 54_[+8(5.56e-06)]_24 chr4:78704311-78704811 1.37e-26 1_[-4(2.43e-06)]_14_[+1(1.05e-13)]_\ [+3(5.72e-10)]_26 chr1:51493308-51493808 1.49e-30 [+10(9.28e-09)]_4_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_1_[-7(4.83e-06)]_22 chr19:37160115-37160615 3.37e-29 6_[-4(2.24e-06)]_9_[+1(1.05e-13)]_\ [+3(3.72e-12)]_26 chr6:33425648-33426148 1.65e-01 7_[-10(3.16e-05)]_6_[+8(2.71e-05)]_\ 49 chr1:223186742-223187242 6.48e-28 39_[-1(1.05e-13)]_[+2(2.59e-10)]_4_\ [+4(5.24e-06)]_4 chr3:38138520-38139020 3.06e-02 17_[-8(6.09e-05)]_19_[+5(4.35e-05)]_\ 15 chr6:30678904-30679404 2.28e-01 54_[-8(8.12e-05)]_24 chr10:119534029-11953452 1.18e-28 10_[+10(1.90e-05)]_4_[+1(1.05e-13)]_\ 3_[+1(1.05e-13)]_25 chr7:134894869-134895369 1.93e-23 28_[+1(1.05e-13)]_3_[+1(1.47e-12)]_\ 27 chr6:169790149-169790649 1.51e-01 100 chr6:70177163-70177663 3.84e-01 10_[-5(3.70e-06)]_63 chr7:43965384-43965884 8.54e-36 13_[-4(1.91e-09)]_8_[+1(1.05e-13)]_\ 3_[+1(1.05e-13)]_18 chr5:69499728-69500228 8.48e-01 100 chr5:69559952-69560452 1.50e-01 35_[+8(6.09e-05)]_43 chr1:245044260-245044760 3.47e-32 24_[+7(3.07e-07)]_5_[+2(1.30e-10)]_\ 5_[+4(9.92e-10)]_9_[+7(8.10e-06)]_1 chr6:89144397-89144897 9.12e-02 26_[+1(4.05e-05)]_53 chr12:12561361-12561861 5.05e-01 10_[+6(6.45e-05)]_59 chr6:32971147-32971647 3.57e-02 100 chr5:73747538-73748038 9.66e-01 100 chr1:202829207-202829707 2.11e-35 24_[-1(1.05e-13)]_1_[-3(3.72e-12)]_\ 10_[+4(1.68e-09)]_6 chr9:20623673-20624173 3.27e-01 100 chr19:47229805-47230305 1.05e-03 [-5(1.74e-06)]_15_[-5(1.47e-06)]_31 chr19:50136745-50137245 4.45e-08 2_[+7(7.41e-07)]_31_[-7(4.22e-07)]_\ 11_[+2(1.29e-05)]_16 chr5:32172468-32172968 7.18e-12 10_[+10(4.15e-07)]_5_[-2(6.94e-06)]_\ 53 chr18:49863855-49864355 1.46e-08 8_[-2(3.64e-07)]_76 chr10:112959222-11295972 9.59e-02 2_[+3(4.77e-05)]_76 chr6:108155273-108155773 7.49e-30 1_[+10(1.45e-09)]_5_[+1(1.05e-13)]_\ 3_[+1(1.05e-13)]_33 chr17:1332360-1332860 1.36e-02 49_[+7(4.38e-05)]_39 chr17:28725191-28725691 7.09e-01 100 chr9:137328133-137328633 9.54e-03 57_[+6(7.54e-05)]_12 chr14:94066112-94066612 1.83e-01 15_[-5(5.31e-06)]_58 chr4:68349786-68350286 6.87e-01 100 chr17:38598561-38599061 8.96e-01 100 chr8:143617054-143617554 1.53e-01 100 chr22:40158119-40158619 3.18e-32 4_[+10(2.02e-07)]_3_[+1(1.05e-13)]_\ 3_[+1(1.05e-13)]_32 chr5:34244122-34244622 1.01e-01 100 chr1:155273485-155273985 1.03e-01 35_[+7(7.13e-05)]_53 chr18:63198056-63198556 1.44e-05 6_[-5(1.12e-09)]_27_[-5(9.50e-11)]_\ 13 chr7:98598795-98599295 1.55e-24 13_[-7(5.68e-06)]_4_[+1(1.05e-13)]_\ [+3(3.72e-12)]_28 chr6:26575385-26575885 9.29e-01 100 chr10:25876829-25877329 2.09e-24 18_[+1(1.05e-13)]_3_[+1(1.05e-13)]_\ [+3(6.75e-06)]_15 chr17:38667239-38667739 1.74e-01 66_[+3(3.62e-05)]_12 chr12:57075164-57075664 1.40e-33 3_[-4(6.29e-09)]_8_[+1(1.05e-13)]_\ [+3(5.02e-11)]_30 chr17:32325925-32326425 4.46e-25 24_[+1(1.05e-13)]_[+3(3.72e-12)]_33 chr17:64667732-64668232 3.71e-08 66_[+2(5.89e-07)]_1_[-10(1.04e-05)]_\ 1 chr18:65998902-65999402 7.15e-33 28_[-1(1.05e-13)]_3_[-1(5.26e-13)]_\ 2_[-10(1.08e-08)]_9 chr1:237000143-237000643 1.08e-27 25_[-1(1.05e-13)]_3_[-1(1.05e-13)]_\ 8_[-10(6.05e-07)]_6 chr14:99879390-99879890 2.78e-03 63_[-2(4.71e-05)]_21 chr6:137838078-137838578 3.26e-06 51_[+7(4.38e-05)]_11_[-1(1.52e-06)]_\ 5 chr8:143597227-143597727 1.95e-02 45_[+8(1.97e-07)]_33 chr5:92610361-92610861 3.95e-24 25_[-2(9.76e-05)]_[+1(1.05e-13)]_\ [+3(5.02e-11)]_16 chr8:68547667-68548167 5.00e-02 100 chr6:29628530-29629030 3.73e-01 49_[-8(3.01e-05)]_29 chr17:38751861-38752361 8.03e-01 100 chr7:103149546-103150046 1.70e-01 100 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chr1:28373374-28373874 5.17e-04 15_[-1(2.89e-06)]_64 chr5:96781013-96781513 4.08e-05 [+3(7.24e-05)]_41_[-7(4.83e-06)]_25 chr3:172143685-172144185 7.77e-30 2_[-4(3.56e-07)]_8_[+1(1.05e-13)]_\ [+3(5.02e-11)]_31 chr6:31546702-31547202 9.21e-01 100 chr19:40055768-40056268 7.63e-02 38_[-5(6.93e-07)]_35 chr17:81512104-81512604 8.47e-01 100 chr19:38766241-38766741 1.17e-29 5_[-4(7.25e-07)]_9_[+1(1.05e-13)]_4_\ [+3(3.07e-11)]_23 chr1:179877161-179877661 1.56e-09 16_[+1(1.85e-07)]_63 chr18:49506383-49506883 5.69e-33 [-4(3.17e-06)]_2_[-7(3.39e-05)]_1_\ [+1(1.05e-13)]_[+1(1.02e-10)]_27 chr13:41700779-41701279 2.78e-01 100 chr11:1418143-1418643 3.19e-01 100 chr15:70865878-70866378 2.35e-24 37_[-1(1.05e-13)]_3_[-1(1.05e-13)]_\ 18 chr13:93496019-93496519 3.75e-07 14_[-6(2.67e-15)]_55 chr17:38256100-38256600 6.22e-01 100 chr18:2565841-2566341 4.94e-24 8_[+1(1.05e-13)]_3_[+1(3.16e-13)]_5_\ [+3(9.67e-12)]_20 chr6:31736171-31736671 1.12e-01 60_[-5(1.68e-05)]_13 chr18:75213598-75214098 1.97e-01 100 chr1:230796106-230796606 1.95e-29 1_[+10(1.66e-07)]_7_[+1(1.05e-13)]_\ [+3(3.72e-12)]_7_[+1(3.35e-08)]_5 chr9:22005739-22006239 8.56e-04 6_[-7(3.50e-06)]_82 chr1:153904046-153904546 1.37e-31 17_[+10(8.47e-08)]_3_[+1(1.05e-13)]_\ [+3(8.28e-10)]_3_[-2(3.23e-05)]_2 chr6:28606935-28607435 1.34e-01 12_[+5(7.90e-06)]_61 chr6:30571292-30571792 1.16e-01 46_[-9(3.36e-05)]_4 chr3:194352568-194353068 1.90e-02 18_[+4(7.21e-05)]_14_[+5(7.25e-08)]_\ 25 chr12:57519891-57520391 9.20e-02 58_[-10(4.84e-05)]_26 chr1:243849024-243849524 4.11e-01 100 chr17:77281389-77281889 6.78e-01 67_[+8(9.79e-05)]_11 chr11:119018056-11901855 9.74e-01 100 chr15:75217542-75218042 5.75e-30 14_[-1(1.05e-13)]_4_[+2(1.30e-10)]_\ 1_[-10(9.24e-07)]_28 chr6:28881140-28881640 7.09e-01 100 chr10:101751758-10175225 3.25e-24 18_[+1(1.05e-13)]_[+3(9.67e-12)]_7_\ [+3(1.83e-05)]_10 chr1:234607223-234607723 2.04e-01 [+8(1.77e-05)]_20_[-8(9.79e-05)]_36 chr5:88243426-88243926 3.52e-03 19_[+7(1.58e-05)]_69 chr6:33080489-33080989 9.07e-01 100 chr17:60753114-60753614 2.65e-26 29_[-1(4.80e-06)]_22_[-1(1.05e-13)]_\ 7 chr6:28648363-28648863 2.30e-01 100 chr11:102747014-10274751 9.16e-01 100 chr7:84738536-84739036 3.77e-26 22_[+1(1.05e-13)]_12_[+3(5.07e-14)]_\ 2_[+1(3.71e-08)] chr11:576102-576602 9.14e-01 100 chr1:100011455-100011955 3.72e-25 30_[-1(1.05e-13)]_3_[-1(1.05e-13)]_\ 25 chr19:41501375-41501875 4.10e-01 100 chr5:36992450-36992950 1.49e-23 63_[-1(1.05e-13)]_[+2(2.59e-10)] chr6:33313645-33314145 5.58e-01 100 chr6:30686985-30687485 2.55e-02 26_[+8(2.49e-08)]_52 chr8:143578257-143578757 1.68e-01 28_[+8(1.77e-05)]_50 chr17:36534444-36534944 9.03e-01 100 chr7:625335-625835 9.72e-01 100 chr16:4425763-4426263 3.46e-01 69_[-8(6.09e-05)]_9 chr17:36948478-36948978 5.66e-01 100 chr5:14580402-14580902 7.15e-01 100 chr19:48716680-48717180 6.82e-01 24_[-8(2.19e-05)]_54 chr19:33473086-33473586 2.98e-02 11_[-4(7.68e-05)]_73 chr5:14858483-14858983 1.35e-32 16_[+10(1.25e-07)]_2_[+1(1.05e-13)]_\ 3_[+1(3.16e-13)]_21 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28_[-3(9.67e-12)]_1_[-1(1.05e-13)]_\ 11_[+4(2.48e-10)]_1 chr19:53537575-53538075 8.18e-04 8_[+8(1.13e-05)]_13_[+5(1.17e-07)]_\ 30 chr6:30626493-30626993 9.29e-01 100 chr5:59594053-59594553 2.53e-26 19_[-3(2.28e-05)]_1_[-1(1.05e-13)]_\ 1_[-3(3.72e-12)]_14 chr6:33391896-33392396 6.43e-01 49_[+8(4.10e-05)]_29 chr16:15094025-15094525 9.75e-01 100 chr5:95920040-95920540 2.44e-24 18_[+2(1.31e-06)]_4_[-1(1.05e-13)]_\ 3_[-1(1.05e-13)]_17 chr4:190111855-190112355 1.06e-38 30_[-4(2.48e-10)]_8_[+1(1.05e-13)]_\ 3_[+1(3.16e-13)]_1 chr13:97977078-97977578 1.23e-03 1_[+2(7.31e-05)]_14_[-3(4.46e-05)]_\ 47 chr17:45783168-45783668 7.28e-02 [+8(2.31e-07)]_78 chr13:114131482-11413198 1.87e-05 26_[-5(4.51e-13)]_5_[-5(4.41e-08)]_\ 15 chr2:172098601-172099101 4.19e-03 14_[+5(3.07e-08)]_32_[+4(9.88e-05)]_\ 11 chr10:29813595-29814095 1.27e-32 1_[-4(8.54e-08)]_9_[+1(1.05e-13)]_3_\ [+1(3.16e-13)]_29 chr6:28814080-28814580 5.07e-01 74_[+8(1.77e-05)]_4 chr7:118054048-118054548 4.41e-33 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29_[-1(1.05e-13)]_3_[-1(1.93e-12)]_\ 6_[+4(2.48e-10)]_4 chr19:34259408-34259908 7.20e-08 45_[-1(3.43e-06)]_3_[-1(2.62e-05)]_\ 10 chr12:56219791-56220291 3.87e-34 5_[-4(8.68e-09)]_9_[+1(1.05e-13)]_\ [+3(9.67e-12)]_27 chr6:28898029-28898529 2.34e-12 51_[+2(5.89e-07)]_1_[-10(5.15e-08)]_\ 16 chr12:65630456-65630956 1.46e-01 100 chr15:44729146-44729646 7.91e-01 100 chr17:1080773-1081273 1.14e-01 62_[+5(1.11e-06)]_11 chr1:11134360-11134860 1.67e-01 100 chr10:97421658-97422158 8.08e-24 1_[+1(1.05e-13)]_3_[+1(1.05e-13)]_\ 54 chr1:112955841-112956341 6.47e-01 100 chr5:109425484-109425984 7.59e-30 19_[-1(1.05e-13)]_3_[-1(1.05e-13)]_\ 10_[-10(1.33e-07)]_10 chr1:155575570-155576070 2.31e-27 4_[+2(1.20e-05)]_9_[-1(1.05e-13)]_4_\ [+2(1.30e-10)]_30 chr5:90668068-90668568 2.15e-24 1_[+9(5.95e-26)]_[-6(4.77e-14)]_18 chr13:62642902-62643402 9.76e-01 100 chr19:43192282-43192782 9.95e-01 100 chr1:58779869-58780369 1.23e-01 3_[+2(3.04e-05)]_81 chr19:54448973-54449473 9.35e-01 100 chr5:87284798-87285298 5.03e-24 35_[-1(1.05e-13)]_3_[-1(1.05e-13)]_\ 20 chr6:31777011-31777511 3.74e-01 100 chr19:36070333-36070833 5.38e-01 59_[+4(1.57e-05)]_25 chr5:43043008-43043508 4.05e-01 100 chr10:3785798-3786298 5.09e-02 17_[-8(1.97e-05)]_[-8(1.34e-06)]_39 chr14:93333207-93333707 8.08e-01 100 chr5:131312398-131312898 4.29e-28 1_[+9(5.74e-29)]_[-6(2.29e-14)]_18 chr1:223840853-223841353 4.76e-11 15_[+10(1.43e-07)]_2_[-2(4.63e-07)]_\ 51 chr4:48906456-48906956 2.63e-01 68_[-8(1.13e-05)]_10 chr18:48023187-48023687 5.43e-01 6_[+4(4.87e-05)]_59_[+4(7.21e-05)]_\ 3 chr3:44761551-44762051 2.00e-01 60_[+8(4.92e-06)]_18 chr5:36643783-36644283 3.35e-32 12_[+10(1.88e-08)]_6_[+1(1.05e-13)]_\ [+3(2.07e-10)]_23 chr17:38751633-38752133 4.94e-01 100 chr18:62524408-62524908 5.60e-01 100 chr6:138525309-138525809 4.69e-28 2_[+10(3.25e-07)]_4_[+1(1.05e-13)]_\ 3_[+1(1.05e-13)]_33 chr12:42215704-42216204 2.24e-30 [-4(3.39e-08)]_10_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_29 chr17:1715976-1716476 6.43e-01 100 chr16:4402497-4402997 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chr6:33323144-33323644 1.50e-01 67_[+10(2.36e-05)]_17 chr6:31494103-31494603 7.25e-01 100 chr12:689840-690340 2.68e-33 14_[+7(5.31e-06)]_3_[-1(1.05e-13)]_\ 3_[-1(1.05e-13)]_3_[-10(5.33e-09)]_7 chr6:28790319-28790819 9.21e-01 100 chr5:125409776-125410276 3.50e-01 54_[+5(8.88e-05)]_19 chr1:1309395-1309895 6.06e-03 25_[+8(8.36e-10)]_53 chr6:33271813-33272313 1.46e-01 12_[-8(3.34e-05)]_66 chr6:28747353-28747853 1.24e-03 20_[-7(3.25e-05)]_68 chr17:38559276-38559776 6.77e-01 67_[+8(3.34e-05)]_11 chr5:88683599-88684099 1.29e-01 54_[-8(6.28e-06)]_24 chr16:21572322-21572822 1.95e-30 [-4(1.06e-07)]_9_[+1(1.05e-13)]_\ [+3(3.72e-12)]_32 chr6:32583834-32584334 2.79e-08 1_[-5(1.38e-12)]_20_[-8(1.77e-05)]_\ 30 chr1:165854377-165854877 1.40e-25 24_[+1(1.05e-13)]_3_[+1(1.93e-12)]_\ 31 chr17:46193709-46194209 4.73e-01 46_[-8(9.79e-05)]_32 chr12:123312986-12331348 7.40e-26 18_[+1(1.05e-13)]_3_[+1(1.05e-13)]_\ 37 chr6:30647465-30647965 3.79e-01 37_[-8(4.53e-05)]_41 chr6:28807681-28808181 8.08e-04 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chr6:28895992-28896492 2.12e-01 100 chr5:32367212-32367712 3.69e-32 7_[+10(1.08e-08)]_8_[+1(1.93e-12)]_\ [+1(1.05e-13)]_27 chr15:71084215-71084715 9.67e-24 32_[-1(1.05e-13)]_3_[-1(1.05e-13)]_\ [+2(2.68e-05)]_7 chr1:210292345-210292845 9.73e-02 36_[+8(1.17e-06)]_42 chr22:35840406-35840906 3.93e-11 21_[+5(1.56e-15)]_3_[+8(9.44e-09)]_\ 27 chr6:31403521-31404021 6.14e-02 6_[+8(6.28e-06)]_12_[+9(5.77e-05)]_\ 10 chr19:35385860-35386360 8.19e-24 68_[-1(1.05e-13)]_11 chr6:33454078-33454578 1.30e-01 44_[-8(1.13e-05)]_7_[-8(9.79e-05)]_\ 5 chr6:31806489-31806989 6.38e-01 74_[+8(4.53e-05)]_4 chr22:38179947-38180447 6.84e-11 [-5(5.65e-17)]_73 chr6:28838804-28839304 9.18e-01 7_[+8(4.53e-05)]_71 chrX:24143940-24144440 3.43e-32 22_[+7(6.46e-06)]_[-1(1.05e-13)]_4_\ [+2(1.30e-10)]_6_[+4(2.56e-07)]_3 chr4:120256193-120256693 1.43e-31 1_[-4(1.35e-05)]_2_[+9(3.18e-28)]_\ [-6(9.34e-16)] chr19:34234635-34235135 1.42e-32 6_[+10(6.64e-06)]_8_[-1(1.05e-13)]_\ 3_[-1(1.05e-13)]_8_[+4(2.48e-10)]_1 chr4:20337292-20337792 5.76e-02 35_[-4(2.62e-05)]_49 chr4:49709157-49709657 3.59e-08 25_[-6(2.18e-13)]_11_[-6(2.18e-13)]_\ 2 chr10:74825715-74826215 6.09e-01 3_[+8(1.01e-05)]_7_[+8(2.19e-05)]_\ 46 chr1:225654676-225655176 8.59e-33 28_[-4(1.68e-09)]_9_[+1(1.05e-13)]_\ [+3(4.80e-09)]_4 chr1:210236479-210236979 4.52e-03 79_[-4(2.11e-05)]_5 chr6:28597166-28597666 9.87e-01 100 chr16:15590827-15591327 2.47e-01 100 chr19:28425378-28425878 5.94e-02 100 chr9:135985094-135985594 1.25e-27 [+10(4.44e-07)]_7_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_32 chr10:93209047-93209547 1.06e-01 100 chr3:194427434-194427934 4.26e-25 3_[+1(1.05e-13)]_3_[+1(1.05e-13)]_5_\ [+1(1.41e-06)]_[-7(3.09e-05)]_14 chr1:223518491-223518991 1.52e-02 100 chr6:32195912-32196412 7.34e-01 100 chr17:1114977-1115477 9.45e-01 100 chr5:69559752-69560252 9.53e-01 100 chr6:169751197-169751697 2.33e-01 55_[+4(1.57e-05)]_29 chr5:36928849-36929349 1.12e-03 17_[-4(1.07e-05)]_67 chr1:50882378-50882878 5.94e-35 3_[-4(2.15e-09)]_3_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_33 chr17:46267109-46267609 5.61e-01 100 chr10:102117603-10211810 6.07e-04 73_[+5(3.14e-09)] chr6:31197070-31197570 2.19e-01 34_[-8(5.01e-05)]_44 chr16:425155-425655 2.71e-01 2_[-8(4.53e-05)]_27_[-8(1.58e-05)]_\ 27 chr19:40602294-40602794 1.44e-01 [-8(6.09e-05)]_44_[-8(7.08e-06)]_12 chr7:150359976-150360476 1.27e-06 4_[-5(2.40e-05)]_6_[-5(3.75e-11)]_\ 36 chr6:52995662-52996162 5.09e-01 100 chr6:28542627-28543127 1.94e-01 100 chr1:156661319-156661819 9.93e-09 36_[+5(5.65e-17)]_37 chr13:112346399-11234689 1.10e-03 23_[+6(1.63e-05)]_46 chr10:114649181-11464968 2.10e-30 [-4(2.15e-09)]_6_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_[+3(6.60e-05)]_11 chr12:57941578-57942078 4.46e-01 100 chr13:112213370-11221387 2.15e-02 100 chr3:44734562-44735062 4.43e-02 100 chr6:33200325-33200825 5.51e-01 100 chr7:134886443-134886943 5.13e-01 100 chr6:31652055-31652555 3.98e-10 66_[-5(5.65e-17)]_7 chr12:55972874-55973374 2.47e-02 22_[-5(5.31e-06)]_51 chr19:34359200-34359700 1.67e-02 28_[-5(1.17e-07)]_14_[-8(1.97e-05)]_\ 9 chr17:19255214-19255714 4.97e-24 9_[+7(9.50e-06)]_4_[-1(1.05e-13)]_3_\ [-1(5.26e-13)]_30 chr12:12356974-12357474 2.84e-01 39_[-8(4.53e-05)]_39 chr15:70100540-70101040 5.11e-01 100 chr2:47369728-47370228 9.23e-01 100 chr14:93207106-93207606 5.33e-01 [+8(9.79e-05)]_78 chr12:122512978-12251347 9.85e-32 [+10(1.95e-09)]_5_[+1(1.05e-13)]_3_\ [+1(1.05e-13)]_1_[+1(1.49e-08)]_12 chr19:43709348-43709848 1.05e-23 35_[-1(1.05e-13)]_[+2(2.59e-10)]_8_\ [+7(1.31e-06)]_8 chr19:28400922-28401422 5.80e-02 100 chr1:67698960-67699460 2.84e-34 7_[+10(5.15e-08)]_5_[+1(1.05e-13)]_\ 8_[+3(5.07e-14)]_21 chr6:170306683-170307183 6.03e-01 38_[-8(1.77e-05)]_40 chr18:49439792-49440292 2.02e-26 1_[+10(1.20e-05)]_3_[+1(1.05e-13)]_\ 3_[+1(3.16e-13)]_4_[-3(2.73e-05)]_9 chr10:74827135-74827635 9.98e-01 100 chr6:31271721-31272221 5.31e-01 1_[-8(6.71e-05)]_77 chr17:35809283-35809783 4.91e-02 4_[-8(3.38e-06)]_74 chr19:40103557-40104057 2.76e-29 3_[+10(2.21e-07)]_4_[+1(1.05e-13)]_\ 3_[+1(3.16e-13)]_2_[+1(3.44e-05)]_9 chr19:38850791-38851291 9.55e-01 100 chr9:133336027-133336527 4.17e-01 59_[+8(7.08e-06)]_19 chr6:28673728-28674228 4.89e-01 100 chr5:32282198-32282698 7.56e-33 2_[-4(6.29e-09)]_7_[+1(1.05e-13)]_3_\ [+1(3.16e-13)]_[-7(4.55e-06)]_18 chr1:36158803-36159303 6.09e-34 34_[-1(1.05e-13)]_[+2(1.30e-10)]_\ [-10(1.45e-09)]_13 chr10:86796249-86796749 6.79e-25 41_[-1(1.05e-13)]_4_[+2(1.30e-10)]_\ 18 chr1:26620531-26621031 9.98e-01 100 chr2:168890076-168890576 4.35e-01 100 chr5:69369340-69369840 3.40e-01 2_[+8(1.76e-06)]_76 chr19:39996623-39997123 8.23e-01 100 chr17:38825322-38825822 8.21e-01 100 chr6:28587049-28587549 7.46e-01 100 chr16:46492-46992 4.64e-31 11_[-4(1.48e-07)]_3_[+1(1.05e-13)]_\ [+1(5.26e-13)]_28 chr6:30556243-30556743 1.36e-01 33_[+8(8.85e-07)]_45 chr5:71587123-71587623 8.04e-01 100 chr17:996905-997405 8.64e-01 100 chr6:30557066-30557566 1.05e-01 18_[-8(1.26e-05)]_12_[-5(8.55e-05)]_\ 21 chr1:27181866-27182366 3.18e-32 31_[-1(1.05e-13)]_3_[-1(2.23e-11)]_\ 2_[+4(2.56e-07)]_6 chr6:28795848-28796348 2.22e-01 100 chr6:31827671-31828171 8.73e-02 61_[-4(3.02e-05)]_23 chr17:77233775-77234275 8.08e-01 100 chr5:32157863-32158363 5.93e-38 31_[+1(1.05e-13)]_3_[-7(3.84e-08)]_\ 3_[-5(5.65e-17)]_3 chr10:35197186-35197686 1.39e-30 15_[+2(1.48e-05)]_2_[-1(1.05e-13)]_\ 3_[-1(1.05e-13)]_6_[-10(5.14e-10)] chr12:48866317-48866817 4.30e-24 3_[-3(5.81e-05)]_35_[-1(1.05e-13)]_\ [+2(2.59e-10)]_3 chr6:28589162-28589662 2.19e-01 65_[-10(4.29e-06)]_19 chr19:39996956-39997456 4.95e-01 51_[-4(9.28e-05)]_33 chr12:104635-105135 6.64e-01 100 chrX:63439525-63440025 5.52e-24 31_[+1(1.05e-13)]_[+3(1.07e-10)]_1_\ [-2(2.27e-05)]_9 chr10:72580222-72580722 8.59e-30 26_[-1(9.48e-13)]_[-1(3.16e-13)]_4_\ [-10(2.14e-08)]_12 chr6:33391693-33392193 8.65e-01 100 chr6:30345071-30345571 1.43e-10 11_[-8(2.19e-05)]_10_[+9(3.02e-17)]_\ 7 chr5:43014458-43014958 3.48e-23 29_[-2(1.30e-10)]_1_[+1(5.26e-13)]_\ 33 chr17:46101160-46101660 6.10e-04 74_[+3(7.69e-05)]_4 chr19:36418207-36418707 1.10e-01 27_[+8(6.28e-06)]_51 chr17:45584157-45584657 8.01e-01 100 chr19:40602072-40602572 3.73e-01 14_[+8(7.68e-07)]_64 chr1:155261969-155262469 3.81e-01 1_[-8(8.85e-07)]_77 chr19:34254117-34254617 7.46e-01 [-8(1.41e-05)]_56_[-8(1.41e-05)] chr5:69492370-69492870 7.78e-01 58_[+8(9.79e-05)]_20 chr7:148339267-148339767 9.18e-01 100 chr6:31971796-31972296 7.88e-03 64_[+8(1.54e-06)]_14 chr12:11171202-11171702 7.01e-01 43_[-8(1.13e-05)]_35 chr6:30647266-30647766 1.04e-01 1_[+8(1.02e-06)]_77 chr17:36545475-36545975 7.52e-03 4_[+8(8.66e-08)]_74 chr15:101945846-10194634 1.23e-24 9_[-3(6.75e-06)]_1_[-1(1.05e-13)]_3_\ [-1(5.26e-13)]_23 chr1:144551745-144552245 7.32e-01 36_[-8(8.12e-05)]_42 chr13:110965257-11096575 5.78e-01 100 chr1:26620817-26621317 2.74e-01 100 chr5:59303187-59303687 2.14e-04 16_[-1(6.47e-06)]_63 chr5:71455477-71455977 6.85e-02 31_[+8(1.40e-08)]_47 chr3:11846575-11847075 9.69e-01 100 chr6:28866475-28866975 3.94e-01 65_[-8(1.58e-05)]_13 chr7:133492167-133492667 1.23e-04 45_[-1(6.75e-06)]_34 chr17:1399866-1400366 9.38e-01 100 chr19:40567075-40567575 2.07e-27 3_[-4(5.90e-07)]_7_[+1(1.05e-13)]_3_\ [+1(1.93e-12)]_29 chr19:40090497-40090997 1.86e-02 25_[-5(3.30e-08)]_48 chr1:236097028-236097528 9.59e-01 100 chr6:30907818-30908318 9.31e-01 100 chr9:33474197-33474697 2.06e-27 8_[-3(4.43e-06)]_2_[-1(1.05e-13)]_3_\ [-1(5.26e-13)]_3_[+4(6.70e-06)]_4 chr7:141738057-141738557 2.84e-01 100 chr19:39970589-39971089 8.82e-02 6_[+9(1.44e-06)]_44 chr19:34171949-34172449 1.09e-01 76_[-8(5.56e-06)]_2 chr1:155244582-155245082 7.65e-01 100 chr6:33271608-33272108 6.04e-01 100 chr19:39833787-39834287 1.84e-01 8_[-8(1.58e-05)]_70 chr1_KI270713v1_random:2 4.82e-01 100 chr1:243255965-243256465 5.67e-01 100 chrUn_KI270467v1:2156-26 1.08e-09 27_[+6(9.13e-10)]_11_[+6(4.68e-13)] chr9:133417906-133418406 9.28e-01 100 chrUn_KI270466v1:125-625 9.41e-12 6_[-3(1.81e-06)]_4_[+6(7.53e-14)]_\ 37 chr12:12266900-12267400 7.28e-01 5_[-8(9.79e-05)]_73 chrUn_KI270467v1:3129-36 1.04e-10 15_[+6(6.15e-11)]_11_[+6(4.27e-13)]_\ 12 chrUn_KI270467v1:1948-24 6.16e-09 2_[-3(1.81e-06)]_4_[+6(8.96e-12)]_\ 41 chrUn_KI270467v1:2926-34 7.21e-12 9_[+6(1.66e-12)]_11_[+6(8.97e-11)]_\ 18 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: kadru ********************************************************************************