Database and Motifs High-scoring Motif Occurences Debugging Information


FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]

DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
Database contains 3000 sequences, 1500000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
CCCHDGGG 8 CCCCGGGG
CAGCRGGR 8 CAGCAGGG
DTTTAY 6 TTTTAT
CWCCCD 6 CTCCCA
CNGGGA 6 CGGGGA
AMAMACA 7 ACACACA
CCHGGAGA 8 CCTGGAGA
GCGCWS 6 GCGCTG
GGAAD 5 GGAAG
TAATBA 6 TAATGA
AGATAAG 7 AGATAAG
CACGTGM 7 CACGTGC

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.194 C 0.306 G 0.306 T 0.194

SECTION I: HIGH-SCORING MOTIF OCCURENCES
Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
AMAMACA DREME-6 chr7 + 191746 191752 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr7 + 191762 191768 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 191764 191770 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 191784 191790 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 191792 191798 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 191794 191800 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 191826 191832 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 191828 191834 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 191830 191836 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 191842 191848 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 - 625015 625021 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr16 - 681910 681916 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr16 - 681912 681918 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr16 - 682081 682087 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr11 - 764441 764447 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990935 990941 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990937 990943 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990939 990945 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990941 990947 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990943 990949 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990953 990959 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990955 990961 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990957 990963 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 990959 990965 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 + 1316167 1316173 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 1348018 1348024 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 - 1465353 1465359 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 + 1770216 1770222 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924796 1924802 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924798 1924804 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924800 1924806 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924802 1924808 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924804 1924810 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924806 1924812 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924808 1924814 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924810 1924816 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924812 1924818 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924814 1924820 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924816 1924822 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924818 1924824 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924820 1924826 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 1924822 1924828 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 - 2044309 2044315 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 2044552 2044558 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 2656090 2656096 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 2656247 2656253 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 2656249 2656255 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 3036628 3036634 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 3036630 3036636 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 + 3076836 3076842 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 3199872 3199878 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 3199884 3199890 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr16 - 4271554 4271560 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr16 - 4615253 4615259 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 + 4719891 4719897 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 + 4984804 4984810 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 + 4984806 4984812 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr7 - 6577580 6577586 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 6613495 6613501 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 6613497 6613503 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 + 7044045 7044051 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 + 7044047 7044053 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 + 7239263 7239269 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 - 7438488 7438494 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 - 7438693 7438699 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 8064459 8064465 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 8064461 8064467 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 8064463 8064469 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 8164524 8164530 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr18 - 9476258 9476264 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 9852956 9852962 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr3 + 11475868 11475874 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475870 11475876 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475872 11475878 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475874 11475880 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475876 11475882 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475878 11475884 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475880 11475886 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475882 11475888 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475884 11475890 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475886 11475892 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475888 11475894 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475890 11475896 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475892 11475898 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475894 11475900 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475896 11475902 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475898 11475904 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr3 + 11475900 11475906 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr2 - 11483213 11483219 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 11483330 11483336 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 11483332 11483338 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 11483334 11483340 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 11483441 11483447 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 11483443 11483449 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 11483445 11483451 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 11483447 11483453 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 11483449 11483455 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 11944422 11944428 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944424 11944430 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944426 11944432 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944428 11944434 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944430 11944436 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944432 11944438 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944434 11944440 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944436 11944442 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944438 11944444 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944440 11944446 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944442 11944448 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944444 11944450 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 11944446 11944452 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 - 12433950 12433956 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 12433952 12433958 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 12433954 12433960 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 12433956 12433962 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 12433958 12433964 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 12433960 12433966 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 12433962 12433968 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr18 + 12658321 12658327 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr5 - 14147454 14147460 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr5 - 14147456 14147462 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr16 + 14286190 14286196 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381266 14381272 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381268 14381274 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381270 14381276 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381272 14381278 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381274 14381280 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381276 14381282 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381278 14381284 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381280 14381286 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381282 14381288 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381284 14381290 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381286 14381292 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381288 14381294 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381290 14381296 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381292 14381298 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381294 14381300 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381296 14381302 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 14381298 14381304 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr3 - 14439753 14439759 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr3 - 14439755 14439761 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr3 - 14439757 14439763 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 14598087 14598093 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 + 16759995 16760001 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 16759997 16760003 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 16759999 16760005 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr17 + 17849247 17849253 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 17914111 17914117 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 18593358 18593364 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr19 + 18593360 18593366 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr19 + 18593362 18593368 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr19 + 18593364 18593370 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr19 + 18593366 18593372 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr7 + 19116442 19116448 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr22 - 19177009 19177015 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr14 - 20469812 20469818 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr14 - 20469824 20469830 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr14 - 20469826 20469832 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr14 + 20684584 20684590 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr22 - 21983073 21983079 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 - 22037115 22037121 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr18 - 22169120 22169126 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr18 - 22169122 22169128 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr16 - 22191545 22191551 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 22392945 22392951 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr8 - 22400777 22400783 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 - 22552963 22552969 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr14 - 23071576 23071582 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 - 23247123 23247129 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 25544727 25544733 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 25906224 25906230 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr13 - 26254207 26254213 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 26328125 26328131 4.04e-05 0.0935 acacACA
AMAMACA DREME-6 chr1 + 26328372 26328378 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr22 - 27378237 27378243 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 27908227 27908233 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr22 + 28029280 28029286 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 28520545 28520551 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 28736349 28736355 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 28748375 28748381 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 28748377 28748383 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 28861007 28861013 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 28861009 28861015 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 + 28950250 28950256 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr4 + 30718312 30718318 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 30824113 30824119 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 30824115 30824121 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 30856560 30856566 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 30856562 30856568 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 30856564 30856570 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 30856580 30856586 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 30856594 30856600 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr1 + 30856596 30856602 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr14 - 31297337 31297343 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 + 31652334 31652340 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652336 31652342 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652338 31652344 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652340 31652346 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652342 31652348 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652344 31652350 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652346 31652352 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652348 31652354 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652350 31652356 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr6 + 31652352 31652358 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928175 31928181 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928175 31928181 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928177 31928183 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928177 31928183 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928179 31928185 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928179 31928185 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928181 31928187 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928181 31928187 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928183 31928189 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928183 31928189 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928185 31928191 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928185 31928191 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928187 31928193 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928187 31928193 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928189 31928195 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928189 31928195 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928191 31928197 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928191 31928197 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928298 31928304 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928298 31928304 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928300 31928306 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 31928300 31928306 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr17 - 32299117 32299123 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 32350764 32350770 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 32968588 32968594 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 32968590 32968596 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 33136970 33136976 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 33293414 33293420 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 33324893 33324899 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 33324895 33324901 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 + 33336161 33336167 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 + 33336163 33336169 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797248 33797254 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797250 33797256 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797252 33797258 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797254 33797260 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797256 33797262 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797258 33797264 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797260 33797266 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797262 33797268 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797264 33797270 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797266 33797272 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr19 - 33797272 33797278 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797274 33797280 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 33797276 33797282 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 33818155 33818161 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr11 + 34263808 34263814 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr11 - 34263935 34263941 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 + 34888082 34888088 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 35691130 35691136 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr19 - 35947600 35947606 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 35947602 35947608 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 35947604 35947610 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr19 - 35947622 35947628 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr19 - 35947630 35947636 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 35947632 35947638 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 - 36374600 36374606 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 36604875 36604881 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 36604971 36604977 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr6 - 36680310 36680316 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 36680312 36680318 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 36680314 36680320 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr6 - 36680326 36680332 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 36680328 36680334 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 36680330 36680336 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 36680332 36680338 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 36680334 36680340 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 36680336 36680342 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 36680338 36680344 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 36698603 36698609 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 36698605 36698611 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 36722977 36722983 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr14 + 36835457 36835463 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 36916651 36916657 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 36916653 36916659 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 37367079 37367085 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 37545566 37545572 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 37695387 37695393 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 37719226 37719232 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 - 37796539 37796545 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr20 + 38165472 38165478 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr20 + 38165542 38165548 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr20 + 38165585 38165591 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr20 + 38165613 38165619 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 + 38224048 38224054 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr19 + 38224052 38224058 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr19 + 38224480 38224486 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr19 + 38224560 38224566 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr21 - 38806825 38806831 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 38806827 38806833 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 38806844 38806850 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 + 39059707 39059713 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr2 - 39121347 39121353 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr22 + 39351996 39352002 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr13 + 39602615 39602621 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr13 + 39768144 39768150 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chrX - 39969157 39969163 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 39997327 39997333 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 39997329 39997335 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr19 - 39997421 39997427 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr4 + 40057520 40057526 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr4 - 40057584 40057590 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr15 + 40092440 40092446 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr15 + 40092456 40092462 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr19 + 40598605 40598611 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr19 - 40602175 40602181 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 40920965 40920971 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 40921204 40921210 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 + 40991919 40991925 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chrX - 41333261 41333267 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr22 + 41448434 41448440 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr15 - 41894789 41894795 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 42270843 42270849 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 42270845 42270851 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr19 - 42270847 42270853 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr21 - 42538501 42538507 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr1 - 47509366 47509372 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr17 + 78782540 78782546 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 + 79115363 79115369 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr13 - 79393907 79393913 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr13 - 79393909 79393915 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr13 - 79393911 79393917 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr13 + 79394009 79394015 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr17 - 79936872 79936878 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 79936874 79936880 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 79936876 79936882 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr17 - 79936910 79936916 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr17 - 79936914 79936920 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr17 - 79936922 79936928 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 79936924 79936930 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 79936926 79936932 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 79936928 79936934 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr17 - 79936932 79936938 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr18 - 80034866 80034872 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 + 81291789 81291795 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr17 - 81429582 81429588 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr4 - 81472222 81472228 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr4 - 81472224 81472230 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 + 82686406 82686412 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 + 82686539 82686545 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr6 + 83709216 83709222 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr15 - 84571275 84571281 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr15 - 84571277 84571283 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr15 - 84981179 84981185 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 85576609 85576615 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr1 + 85577483 85577489 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr14 + 89401992 89401998 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr14 + 89401994 89402000 4.04e-05 0.0935 acacaca
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AMAMACA DREME-6 chr3 - 113168587 113168593 4.04e-05 0.0935 ACACACA
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AMAMACA DREME-6 chr13 - 113458306 113458312 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 - 114611150 114611156 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 + 116958549 116958555 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr11 + 118156690 118156696 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr11 - 118928255 118928261 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr11 + 118928413 118928419 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 119416253 119416259 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr1 + 119647979 119647985 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chrX - 119735118 119735124 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 120326232 120326238 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 120326234 120326240 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr12 - 120326236 120326242 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 120811143 120811149 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 120811145 120811151 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr8 + 120811147 120811153 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 + 121263029 121263035 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 + 121322374 121322380 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 + 121322427 121322433 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 121322435 121322441 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 121322449 121322455 4.04e-05 0.0935 acacaca
AMAMACA DREME-6 chr10 + 121527744 121527750 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 - 121572907 121572913 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 + 124092199 124092205 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr10 + 125895734 125895740 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr11 + 126116156 126116162 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 + 129175883 129175889 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 + 129175885 129175891 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr11 + 129375565 129375571 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr7 - 129780572 129780578 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 - 130287889 130287895 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 - 130287891 130287897 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr7 + 130668215 130668221 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chrX + 130903228 130903234 4.04e-05 0.0935 ACACACA
AMAMACA DREME-6 chr9 + 131678692 131678698 4.04e-05 0.0935 ACACACA
DEBUGGING INFORMATION

Command line: 

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_13 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif AMAMACA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa

Settings: 


  

    output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_13
    MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml
    sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.fa
  
  

    background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF423.IDR0.05.filt.narrowPeak.top3000.summitPlusMinus250bp.MemeChipResultsDefaultMax/background
    alphabet = DNA
    max stored scores = 100000
  
  

    allow clobber = true
    compute q-values = true
    parse genomic coord. = true
  

  

    text only = false
    scan both strands = true
    max strand = false
  

  

    threshold type = p-value
    output theshold = 0.0001
    pseudocount = 0.1
  

  

    alpha = 1
    verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.

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