******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF418.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr7:619963-620463 1.0000 100 chr5:14264532-14265032 1.0000 100 chr18:35583094-35583594 1.0000 100 chr1:46387843-46388343 1.0000 100 chr10:17201428-17201928 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chr1:181127024-181127524 1.0000 100 chr1:232866831-232867331 1.0000 100 chr5:144037403-144037903 1.0000 100 chr13:36610500-36611000 1.0000 100 chr2:47676504-47677004 1.0000 100 chr8:63153101-63153601 1.0000 100 chr8:19537288-19537788 1.0000 100 chr2:134764761-134765261 1.0000 100 chr6:32868089-32868589 1.0000 100 chr10:6088659-6089159 1.0000 100 chr10:93208963-93209463 1.0000 100 chrX:1511188-1511688 1.0000 100 chr3:99925551-99926051 1.0000 100 chr17:26885529-26886029 1.0000 100 chr14_GL000225v1_random: 1.0000 100 chr1:111586910-111587410 1.0000 100 chr8:24940262-24940762 1.0000 100 chr15:75717667-75718167 1.0000 100 chr6:106829667-106830167 1.0000 100 chr17:77233791-77234291 1.0000 100 chr8:144068040-144068540 1.0000 100 chr6:129771936-129772436 1.0000 100 chr19:48539581-48540081 1.0000 100 chr2:113809360-113809860 1.0000 100 chr1:80054137-80054637 1.0000 100 chr9:136738025-136738525 1.0000 100 chr17:78558303-78558803 1.0000 100 chr6:26204079-26204579 1.0000 100 chr1:226450676-226451176 1.0000 100 chr10:112951743-11295224 1.0000 100 chr10:44932673-44933173 1.0000 100 chr9:69085576-69086076 1.0000 100 chr6:2543072-2543572 1.0000 100 chr2:235046889-235047389 1.0000 100 chr17:26619783-26620283 1.0000 100 chr1:227628500-227629000 1.0000 100 chr8:74099487-74099987 1.0000 100 chr8:140821815-140822315 1.0000 100 chr10:25974795-25975295 1.0000 100 chr5:10601229-10601729 1.0000 100 chr15:60374686-60375186 1.0000 100 chr16:85551532-85552032 1.0000 100 chr1:150196425-150196925 1.0000 100 chr13:97425862-97426362 1.0000 100 chr1:229221453-229221953 1.0000 100 chr1:116732361-116732861 1.0000 100 chr5:77029734-77030234 1.0000 100 chr7:98066071-98066571 1.0000 100 chr17:41360219-41360719 1.0000 100 chr10:87586160-87586660 1.0000 100 chr4:80074547-80075047 1.0000 100 chr1:25911003-25911503 1.0000 100 chr2:218707708-218708208 1.0000 100 chr12:6092747-6093247 1.0000 100 chr10:72857878-72858378 1.0000 100 chr22:44500502-44501002 1.0000 100 chr18:13328196-13328696 1.0000 100 chr17:26603656-26604156 1.0000 100 chr2:69646919-69647419 1.0000 100 chr6:106911216-106911716 1.0000 100 chr1:90926180-90926680 1.0000 100 chr1:100036721-100037221 1.0000 100 chr6:143841056-143841556 1.0000 100 chr18:62310801-62311301 1.0000 100 chr14:50961926-50962426 1.0000 100 chr14:49861965-49862465 1.0000 100 chr4:3755135-3755635 1.0000 100 chr9:135680816-135681316 1.0000 100 chr17:81980420-81980920 1.0000 100 chr1:59266234-59266734 1.0000 100 chr21:42620144-42620644 1.0000 100 chr6:160053901-160054401 1.0000 100 chr10:101163898-10116439 1.0000 100 chr6:37665716-37666216 1.0000 100 chr1:232223214-232223714 1.0000 100 chr10:70575612-70576112 1.0000 100 chr16:74283713-74284213 1.0000 100 chr11:3057158-3057658 1.0000 100 chr1:125179942-125180442 1.0000 100 chr19:38995238-38995738 1.0000 100 chr4:153211786-153212286 1.0000 100 chr1:231066759-231067259 1.0000 100 chr16:1271746-1272246 1.0000 100 chr14:90550255-90550755 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF418.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF418.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF418.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 599 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 59900 N= 599 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.246 C 0.254 G 0.254 T 0.246 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF418.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.256 C 0.244 G 0.244 T 0.256 ******************************************************************************** ******************************************************************************** MOTIF CAGGCTGGGAAGYGTAGCCTCY MEME-1 width = 22 sites = 88 llr = 2096 E-value = 9.1e-550 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGGCTGGGAAGYGTAGCCTCY MEME-1 Description -------------------------------------------------------------------------------- Simplified A :91::::1:aa1:2:a:::::1 pos.-specific C 9:::9:::::::3::::9a:a5 probability G :199::99a::8:8::a::::: matrix T 11::19::::::6:9::::a:4 bits 2.0 * * * 1.8 *** ** ** 1.6 ***** *** ******* 1.4 ********* ******** Relative 1.2 ************ ******** Entropy 1.0 ********************* (34.4 bits) 0.8 ********************* 0.6 ********************* 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel CAGGCTGGGAAGTGTAGCCTCC consensus C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGCTGGGAAGYGTAGCCTCY MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr21:42620144-42620644 + 6 4.89e-14 tatga caggctgggaagtgtagcctcc agccagaagc chr17:81980420-81980920 + 2 4.89e-14 a caggctgggaagtgtagcctcc agccagaagc chr18:13328196-13328696 - 72 4.89e-14 CTTCTGA CAGGCTGGGAAGTGTAGCCTCC GGCCAGAAGC chr10:72857878-72858378 + 9 4.89e-14 cattctga caggctgggaagtgtagcctcc attcagaagc chr1:5965836-5966336 - 41 4.89e-14 GCCTTTCTGA CAGGCTGGGAAGTGTAGCCTCC AGCCAGAAGC chr11:102684748-10268524 - 75 4.89e-14 CTGA CAGGCTGGGAAGTGTAGCCTCC AGCCAGAAGC chr2:172781064-172781564 + 3 4.89e-14 gg caggctgggaagtgtagcctcc agccagaagc chr20:16418623-16419123 - 71 4.89e-14 CATTCTGA CAGGCTGGGAAGTGTAGCCTCC AGCTGGAAGC chr2:11766194-11766694 + 28 4.89e-14 ccaattctga caggctgggaagtgtagcctcc tgccagaagc chr12:6092747-6093247 - 66 1.00e-13 GGCCATCCTG CAGGCTGGGAAGTGTAGCCTCT GGTAGAAACT chr4:80074547-80075047 + 6 1.00e-13 cttga caggctgggaagtgtagcctct ggcagagaca chr1:150196425-150196925 - 66 1.00e-13 TTGCAGCCTG CAGGCTGGGAAGTGTAGCCTCT GGTAGAAACT chr6:129771936-129772436 - 67 1.00e-13 GCCATTCTGA CAGGCTGGGAAGTGTAGCCTCT GGTCAGGAGC chr14:31241471-31241971 + 8 1.00e-13 attttga caggctgggaagtgtagcctct ggccaaaggc chrX:154961956-154962456 - 44 1.00e-13 GAAAGGGTTG CAGGCTGGGAAGTGTAGCCTCT GGCAGCAAAT chr2:129870962-129871462 - 79 1.00e-13 . CAGGCTGGGAAGTGTAGCCTCT GGCAAAGCCC chr1:231066759-231067259 + 10 1.47e-13 ccattctga caggctgggaagcgtagcctcc agtcagaagc chr6:143841056-143841556 + 9 1.47e-13 tggcctga caggctgggaagcgtagcctcc agcctgaagc chr6:106829667-106830167 - 67 1.47e-13 GCCATTCTGA CAGGCTGGGAAGCGTAGCCTCC GGTCAGAAGC chr8:15317872-15318372 + 17 1.47e-13 gccattctga caggctgggaagcgtagcctcc agccagaagc chr6:160053901-160054401 + 8 2.98e-13 tttctga caggctgggaagtgtagcctca ggccagaagc chr2:16254507-16255007 - 64 3.50e-13 GCCATTCTGA CAGGCTGGGAAATGTAGCCTCC GGCCAGAAAC chr1:25911003-25911503 + 11 4.57e-13 gccattctta caggctgggaaatgtagcctct ggtcagaagc chrX:1511188-1511688 - 63 4.57e-13 TATAGCCTAA CAGGCTGGGAAATGTAGCCTCT GGCAGAAACT chr8:63153101-63153601 + 33 4.57e-13 gccattctca caggctgggaaatgtagcctct ggtcagaagc chr18:50552485-50552985 - 61 5.09e-13 GCCATTCTGA CAGGCTGAGAAGTGTAGCCTCC AGCAAAGACC chr7:98066071-98066571 + 10 6.06e-13 gccatccca caggctgggaagcgtagcctca gggagaagcc chr1:59266234-59266734 + 1 7.09e-13 . caggctgagaagtgtagcctct ggtcagaagc chr10:70575612-70576112 + 2 8.61e-13 a caggctgggaaacgtagcctct ggccagaagc chr2:2900214-2900714 - 57 8.61e-13 GCCATTCTGA CTGGCTGGGAAGTGTAGCCTCC AGACAGAAGC chr2:1578489-1578989 - 78 1.01e-12 A TAGGCTGGGAAGTGTAGCCTCC ACTCAGAAGC chr6:37665716-37666216 - 77 1.32e-12 AA TAGGCTGGGAAGTGTAGCCTCT GGCAGAGACT chr22:44500502-44501002 - 79 1.32e-12 . TAGGCTGGGAAGTGTAGCCTCT GGCCAGAAGC chr3:184952280-184952780 + 14 1.32e-12 ggccattcta cgggctgggaagtgtagcctct ggcagaagct chr1:234256611-234257111 - 79 1.37e-12 . CAGGCTGAGAAGCGTAGCCTCT GGCCAGGAAG chr5:73103727-73104227 - 75 1.52e-12 CTGA CAAGCTGGGAAGTGTAGCCTCT GGCCAGAAGC chr9:32498171-32498671 - 69 1.52e-12 GCCATTTTGA CAGGCTGGGAAGTGTAGCCTCG GGCCAGAAGC chr13:102752151-10275265 - 58 1.78e-12 GCCATTCTGA CAGACTGGGAAGTGTAGCCTCC TGTCAGAAGC chr6:106911216-106911716 + 18 2.39e-12 gccgttctaa caggctgggaagtgtagcttct ggtcagaagc chrX:11959030-11959530 + 15 2.39e-12 gccattctgg cagactgggaagtgtagcctct ggccagaagc chr6:153483174-153483674 - 75 2.39e-12 CTGA CAGGCTGGGAAGGGTAGCCTCC TGCCAGAAGC chr13:35740440-35740940 - 65 2.39e-12 GGCCAACCCA CAGGCTGGGAAGTGTAGCTTCT GGTAGAAACC chr18:62310801-62311301 - 64 2.74e-12 GGCCATCCTG CAGGTTGGGAAGCGTAGCCTCT GGCAGAAGCC chr6:2543072-2543572 - 73 2.74e-12 TTCTGA CAGGTTGGGAAGCGTAGCCTCT GGCCAGAAGC chr14:19775128-19775628 - 47 2.74e-12 GCTATTATGA CAGGCTGGGAAATATAGCCTCT GGCCAGGAGC chr17:41360219-41360719 + 11 3.34e-12 gaccatcctg caagctgggaagcgtagcctct ggcagaagcc chr8:24940262-24940762 - 79 3.34e-12 . CAGGCTGGGAAGTGGAGCCTCC TGTGCAGACT chr4:3852691-3853191 - 74 3.90e-12 TCTGA CAGGCTGGGAAGCATAGCCTCA GGTCAGAAGC chr2:113809360-113809860 - 70 4.83e-12 CTATTCTGG CAGGCTGAGAAATGTAGCCTCT GGGCAGAAGC chr10:95812955-95813455 + 8 5.50e-12 attttga caggttgggaagtatagcctcc agtcagaagc chr8:144068040-144068540 - 59 6.04e-12 GCCATTCTGA CAGGCAGGGAAGCGTAGCCTCC AGTCAGAAGT chr8:41076341-41076841 - 56 6.04e-12 GCCATTCTGA CATGCTGGGAAGCGTAGCCTCC AGTCAGAAGC chr1:232866831-232867331 + 6 7.57e-12 cctga caggctgggaggtgtagcctcc ggtagaggcc chr20:15774827-15775327 + 9 9.30e-12 cattctga cgggctgagaagtgtagcctcc agtcagaagc chr1:232223214-232223714 - 75 1.17e-11 CTGG CAGACTGGGAAATGTAGCCTCT GGCCAGAAGC chr2:134764761-134765261 - 74 1.39e-11 TCCTG TGGGCTGGGAAGTGTAGCCTCC AGCAGAAACT chr22:39452117-39452617 + 6 1.60e-11 tctga caggctgggaagcatagcttcc agccagaagc chr3:39022117-39022617 - 68 1.75e-11 GCCATTCTGA CAGGCTGGGAAGCACAGCCTCC AGTAAGAAGC chr5:71946183-71946683 + 20 1.87e-11 agcattctgc atggctgggaagtgtagcctcc ggccagaagc chr4:176619305-176619805 + 23 2.01e-11 gccattctta caggctgggaagcacagcctct ggtcagaagc chr14:90550255-90550755 - 75 2.16e-11 TTGA CTGGCTGGGAAATGTAGCCTCA GGCAGAGACC chr11:57735355-57735855 + 5 2.36e-11 ctgt caggcagggaagcatagcctcc gctcagaagc chr9:136738025-136738525 + 10 2.63e-11 cccttctga caggctaggaagcgtagcctca ggccagaagc chr13:36610500-36611000 + 9 2.90e-11 cattctga caggctgaaaagtgtagcctct ggtcagaagc chr4:153211786-153212286 - 64 3.15e-11 GCCATTCTGA CAGGCTGGGAAATGTAGCCTAC CGCCAGAAGC chr5:77029734-77030234 - 56 3.15e-11 GCCTTTCTGA CAGGCTTGGAAGCATAGCCTCT GGTCAGAAGC chr2:218707708-218708208 + 14 4.20e-11 gccattctga caggctgggaagtgtagtttct ggcagaagct chr19:35605647-35606147 - 38 4.20e-11 GGCCATCTCA CAGGCCGAGAAGTGTAGCCTCC GGTAGAAGCT chr9:84303714-84304214 - 77 4.58e-11 GA CAAGCTGGGAAGCGTAGTCTCC AACAGAAGCC chr3:86388747-86389247 - 79 4.58e-11 . CAAGCTGGGAAGCATAGCCTCA GGCCAGAAGC chr14:77091203-77091703 + 5 7.66e-11 ccca caggctgggaagtgtaaccttc agaagaagct chr13:97425862-97426362 - 65 1.24e-10 GCCATCCTAA CTGGCTGGGAAGTGTAACCTCA GGCAGAGACC chr1:226450676-226451176 - 72 1.35e-10 ATTCTGA CAGATTGGGAAGCATAGCCTCC AGTCAGAAGC chr12:92877706-92878206 + 17 1.83e-10 TTTTTCTTTT CTTgctgggaagcatagcctcc agcagaagct chr18:33836596-33837096 - 53 1.83e-10 GCCATTCTGA CAGTCGGGGAAGTGTAGCCTCT GGCCAGAAGC chr2:235046889-235047389 + 14 1.99e-10 gctattctga caggttgggaagcagagcctcc tgccagaagc chr1:204876642-204877142 + 55 2.45e-10 cagcagcttg taggctcggaagcatagcctct ggtagaaacc chr19:38995238-38995738 - 60 2.65e-10 TCTATTCTGA CAAGCTCAGAAGTGTAGCCTCT GGCCAGAAGC chr18:31794993-31795493 + 28 2.65e-10 gcaattctga caggctgggaagcacagccttc agtcagaagc chr2:47676504-47677004 - 67 2.87e-10 GCCATTCTGA TGGGCTGGGAACTGTAGCCTCT GGCCAGAAGC chr5:85452034-85452534 + 33 2.87e-10 tgctccctgg agggctgggaagggtagcctcc tgtcagaagc chr4:3755135-3755635 - 78 5.15e-10 G ATGGCTGAGAAGCGTAGCCTCA GGCCAGAAGC chr1:90926180-90926680 - 75 5.15e-10 CCTG CAGGCTTGGAAGTGTATCCTCA GACAGAGACC chr7:80734324-80734824 + 8 9.07e-10 attctga aagggtgggaaatatagcctcc agtcagaagc chr9:69085576-69086076 + 1 1.04e-09 . caggctaagaaatgtagtctct ggccagaagc chr4:184617464-184617964 + 5 1.04e-09 ctga caggctggaaagcgtagccttg ggccagaagc chr1:27083794-27084294 - 72 1.36e-09 CTGCAGG GAGGCTGGGAACTGTAGTCTCT AGGTGGGCAG chr9:83336971-83337471 - 75 4.49e-09 CTGA CAGGTGGGGAAACGTAGACTCT GGCCAGAAGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGCTGGGAAGYGTAGCCTCY MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:42620144-42620644 4.9e-14 5_[+1]_73 chr17:81980420-81980920 4.9e-14 1_[+1]_77 chr18:13328196-13328696 4.9e-14 71_[-1]_7 chr10:72857878-72858378 4.9e-14 8_[+1]_70 chr1:5965836-5966336 4.9e-14 40_[-1]_38 chr11:102684748-10268524 4.9e-14 74_[-1]_4 chr2:172781064-172781564 4.9e-14 2_[+1]_76 chr20:16418623-16419123 4.9e-14 70_[-1]_8 chr2:11766194-11766694 4.9e-14 27_[+1]_51 chr12:6092747-6093247 1e-13 65_[-1]_13 chr4:80074547-80075047 1e-13 5_[+1]_73 chr1:150196425-150196925 1e-13 65_[-1]_13 chr6:129771936-129772436 1e-13 66_[-1]_12 chr14:31241471-31241971 1e-13 7_[+1]_71 chrX:154961956-154962456 1e-13 43_[-1]_35 chr2:129870962-129871462 1e-13 78_[-1] chr1:231066759-231067259 1.5e-13 9_[+1]_69 chr6:143841056-143841556 1.5e-13 8_[+1]_70 chr6:106829667-106830167 1.5e-13 66_[-1]_12 chr8:15317872-15318372 1.5e-13 16_[+1]_62 chr6:160053901-160054401 3e-13 7_[+1]_71 chr2:16254507-16255007 3.5e-13 63_[-1]_15 chr1:25911003-25911503 4.6e-13 10_[+1]_68 chrX:1511188-1511688 4.6e-13 62_[-1]_16 chr8:63153101-63153601 4.6e-13 32_[+1]_46 chr18:50552485-50552985 5.1e-13 60_[-1]_18 chr7:98066071-98066571 6.1e-13 9_[+1]_69 chr1:59266234-59266734 7.1e-13 [+1]_78 chr10:70575612-70576112 8.6e-13 1_[+1]_77 chr2:2900214-2900714 8.6e-13 56_[-1]_22 chr2:1578489-1578989 1e-12 77_[-1]_1 chr6:37665716-37666216 1.3e-12 76_[-1]_2 chr22:44500502-44501002 1.3e-12 78_[-1] chr3:184952280-184952780 1.3e-12 13_[+1]_65 chr1:234256611-234257111 1.4e-12 78_[-1] chr5:73103727-73104227 1.5e-12 74_[-1]_4 chr9:32498171-32498671 1.5e-12 68_[-1]_10 chr13:102752151-10275265 1.8e-12 57_[-1]_21 chr6:106911216-106911716 2.4e-12 17_[+1]_61 chrX:11959030-11959530 2.4e-12 14_[+1]_64 chr6:153483174-153483674 2.4e-12 74_[-1]_4 chr13:35740440-35740940 2.4e-12 64_[-1]_14 chr18:62310801-62311301 2.7e-12 63_[-1]_15 chr6:2543072-2543572 2.7e-12 72_[-1]_6 chr14:19775128-19775628 2.7e-12 46_[-1]_32 chr17:41360219-41360719 3.3e-12 10_[+1]_68 chr8:24940262-24940762 3.3e-12 78_[-1] chr4:3852691-3853191 3.9e-12 73_[-1]_5 chr2:113809360-113809860 4.8e-12 69_[-1]_9 chr10:95812955-95813455 5.5e-12 7_[+1]_71 chr8:144068040-144068540 6e-12 58_[-1]_20 chr8:41076341-41076841 6e-12 55_[-1]_23 chr1:232866831-232867331 7.6e-12 5_[+1]_73 chr20:15774827-15775327 9.3e-12 8_[+1]_70 chr1:232223214-232223714 1.2e-11 74_[-1]_4 chr2:134764761-134765261 1.4e-11 73_[-1]_5 chr22:39452117-39452617 1.6e-11 5_[+1]_73 chr3:39022117-39022617 1.7e-11 67_[-1]_11 chr5:71946183-71946683 1.9e-11 19_[+1]_59 chr4:176619305-176619805 2e-11 22_[+1]_56 chr14:90550255-90550755 2.2e-11 74_[-1]_4 chr11:57735355-57735855 2.4e-11 4_[+1]_74 chr9:136738025-136738525 2.6e-11 9_[+1]_69 chr13:36610500-36611000 2.9e-11 8_[+1]_70 chr4:153211786-153212286 3.1e-11 63_[-1]_15 chr5:77029734-77030234 3.1e-11 55_[-1]_23 chr2:218707708-218708208 4.2e-11 13_[+1]_65 chr19:35605647-35606147 4.2e-11 37_[-1]_41 chr9:84303714-84304214 4.6e-11 76_[-1]_2 chr3:86388747-86389247 4.6e-11 78_[-1] chr14:77091203-77091703 7.7e-11 4_[+1]_74 chr13:97425862-97426362 1.2e-10 64_[-1]_14 chr1:226450676-226451176 1.3e-10 71_[-1]_7 chr12:92877706-92878206 1.8e-10 16_[+1]_62 chr18:33836596-33837096 1.8e-10 52_[-1]_26 chr2:235046889-235047389 2e-10 13_[+1]_65 chr1:204876642-204877142 2.5e-10 54_[+1]_24 chr19:38995238-38995738 2.6e-10 59_[-1]_19 chr18:31794993-31795493 2.6e-10 27_[+1]_51 chr2:47676504-47677004 2.9e-10 66_[-1]_12 chr5:85452034-85452534 2.9e-10 32_[+1]_46 chr4:3755135-3755635 5.1e-10 77_[-1]_1 chr1:90926180-90926680 5.1e-10 74_[-1]_4 chr7:80734324-80734824 9.1e-10 7_[+1]_71 chr9:69085576-69086076 1e-09 [+1]_78 chr4:184617464-184617964 1e-09 4_[+1]_74 chr1:27083794-27084294 1.4e-09 71_[-1]_7 chr9:83336971-83337471 4.5e-09 74_[-1]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGCTGGGAAGYGTAGCCTCY MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGGCTGGGAAGYGTAGCCTCY width=22 seqs=88 chr21:42620144-42620644 ( 6) CAGGCTGGGAAGTGTAGCCTCC 1 chr17:81980420-81980920 ( 2) CAGGCTGGGAAGTGTAGCCTCC 1 chr18:13328196-13328696 ( 72) CAGGCTGGGAAGTGTAGCCTCC 1 chr10:72857878-72858378 ( 9) CAGGCTGGGAAGTGTAGCCTCC 1 chr1:5965836-5966336 ( 41) CAGGCTGGGAAGTGTAGCCTCC 1 chr11:102684748-10268524 ( 75) CAGGCTGGGAAGTGTAGCCTCC 1 chr2:172781064-172781564 ( 3) CAGGCTGGGAAGTGTAGCCTCC 1 chr20:16418623-16419123 ( 71) CAGGCTGGGAAGTGTAGCCTCC 1 chr2:11766194-11766694 ( 28) CAGGCTGGGAAGTGTAGCCTCC 1 chr12:6092747-6093247 ( 66) CAGGCTGGGAAGTGTAGCCTCT 1 chr4:80074547-80075047 ( 6) CAGGCTGGGAAGTGTAGCCTCT 1 chr1:150196425-150196925 ( 66) CAGGCTGGGAAGTGTAGCCTCT 1 chr6:129771936-129772436 ( 67) CAGGCTGGGAAGTGTAGCCTCT 1 chr14:31241471-31241971 ( 8) CAGGCTGGGAAGTGTAGCCTCT 1 chrX:154961956-154962456 ( 44) CAGGCTGGGAAGTGTAGCCTCT 1 chr2:129870962-129871462 ( 79) CAGGCTGGGAAGTGTAGCCTCT 1 chr1:231066759-231067259 ( 10) CAGGCTGGGAAGCGTAGCCTCC 1 chr6:143841056-143841556 ( 9) CAGGCTGGGAAGCGTAGCCTCC 1 chr6:106829667-106830167 ( 67) CAGGCTGGGAAGCGTAGCCTCC 1 chr8:15317872-15318372 ( 17) CAGGCTGGGAAGCGTAGCCTCC 1 chr6:160053901-160054401 ( 8) CAGGCTGGGAAGTGTAGCCTCA 1 chr2:16254507-16255007 ( 64) CAGGCTGGGAAATGTAGCCTCC 1 chr1:25911003-25911503 ( 11) CAGGCTGGGAAATGTAGCCTCT 1 chrX:1511188-1511688 ( 63) CAGGCTGGGAAATGTAGCCTCT 1 chr8:63153101-63153601 ( 33) CAGGCTGGGAAATGTAGCCTCT 1 chr18:50552485-50552985 ( 61) CAGGCTGAGAAGTGTAGCCTCC 1 chr7:98066071-98066571 ( 10) CAGGCTGGGAAGCGTAGCCTCA 1 chr1:59266234-59266734 ( 1) CAGGCTGAGAAGTGTAGCCTCT 1 chr10:70575612-70576112 ( 2) CAGGCTGGGAAACGTAGCCTCT 1 chr2:2900214-2900714 ( 57) CTGGCTGGGAAGTGTAGCCTCC 1 chr2:1578489-1578989 ( 78) TAGGCTGGGAAGTGTAGCCTCC 1 chr6:37665716-37666216 ( 77) TAGGCTGGGAAGTGTAGCCTCT 1 chr22:44500502-44501002 ( 79) TAGGCTGGGAAGTGTAGCCTCT 1 chr3:184952280-184952780 ( 14) CGGGCTGGGAAGTGTAGCCTCT 1 chr1:234256611-234257111 ( 79) CAGGCTGAGAAGCGTAGCCTCT 1 chr5:73103727-73104227 ( 75) CAAGCTGGGAAGTGTAGCCTCT 1 chr9:32498171-32498671 ( 69) CAGGCTGGGAAGTGTAGCCTCG 1 chr13:102752151-10275265 ( 58) CAGACTGGGAAGTGTAGCCTCC 1 chr6:106911216-106911716 ( 18) CAGGCTGGGAAGTGTAGCTTCT 1 chrX:11959030-11959530 ( 15) CAGACTGGGAAGTGTAGCCTCT 1 chr6:153483174-153483674 ( 75) CAGGCTGGGAAGGGTAGCCTCC 1 chr13:35740440-35740940 ( 65) CAGGCTGGGAAGTGTAGCTTCT 1 chr18:62310801-62311301 ( 64) CAGGTTGGGAAGCGTAGCCTCT 1 chr6:2543072-2543572 ( 73) CAGGTTGGGAAGCGTAGCCTCT 1 chr14:19775128-19775628 ( 47) CAGGCTGGGAAATATAGCCTCT 1 chr17:41360219-41360719 ( 11) CAAGCTGGGAAGCGTAGCCTCT 1 chr8:24940262-24940762 ( 79) CAGGCTGGGAAGTGGAGCCTCC 1 chr4:3852691-3853191 ( 74) CAGGCTGGGAAGCATAGCCTCA 1 chr2:113809360-113809860 ( 70) CAGGCTGAGAAATGTAGCCTCT 1 chr10:95812955-95813455 ( 8) CAGGTTGGGAAGTATAGCCTCC 1 chr8:144068040-144068540 ( 59) CAGGCAGGGAAGCGTAGCCTCC 1 chr8:41076341-41076841 ( 56) CATGCTGGGAAGCGTAGCCTCC 1 chr1:232866831-232867331 ( 6) CAGGCTGGGAGGTGTAGCCTCC 1 chr20:15774827-15775327 ( 9) CGGGCTGAGAAGTGTAGCCTCC 1 chr1:232223214-232223714 ( 75) CAGACTGGGAAATGTAGCCTCT 1 chr2:134764761-134765261 ( 74) TGGGCTGGGAAGTGTAGCCTCC 1 chr22:39452117-39452617 ( 6) CAGGCTGGGAAGCATAGCTTCC 1 chr3:39022117-39022617 ( 68) CAGGCTGGGAAGCACAGCCTCC 1 chr5:71946183-71946683 ( 20) ATGGCTGGGAAGTGTAGCCTCC 1 chr4:176619305-176619805 ( 23) CAGGCTGGGAAGCACAGCCTCT 1 chr14:90550255-90550755 ( 75) CTGGCTGGGAAATGTAGCCTCA 1 chr11:57735355-57735855 ( 5) CAGGCAGGGAAGCATAGCCTCC 1 chr9:136738025-136738525 ( 10) CAGGCTAGGAAGCGTAGCCTCA 1 chr13:36610500-36611000 ( 9) CAGGCTGAAAAGTGTAGCCTCT 1 chr4:153211786-153212286 ( 64) CAGGCTGGGAAATGTAGCCTAC 1 chr5:77029734-77030234 ( 56) CAGGCTTGGAAGCATAGCCTCT 1 chr2:218707708-218708208 ( 14) CAGGCTGGGAAGTGTAGTTTCT 1 chr19:35605647-35606147 ( 38) CAGGCCGAGAAGTGTAGCCTCC 1 chr9:84303714-84304214 ( 77) CAAGCTGGGAAGCGTAGTCTCC 1 chr3:86388747-86389247 ( 79) CAAGCTGGGAAGCATAGCCTCA 1 chr14:77091203-77091703 ( 5) CAGGCTGGGAAGTGTAACCTTC 1 chr13:97425862-97426362 ( 65) CTGGCTGGGAAGTGTAACCTCA 1 chr1:226450676-226451176 ( 72) CAGATTGGGAAGCATAGCCTCC 1 chr12:92877706-92878206 ( 17) CTTGCTGGGAAGCATAGCCTCC 1 chr18:33836596-33837096 ( 53) CAGTCGGGGAAGTGTAGCCTCT 1 chr2:235046889-235047389 ( 14) CAGGTTGGGAAGCAGAGCCTCC 1 chr1:204876642-204877142 ( 55) TAGGCTCGGAAGCATAGCCTCT 1 chr19:38995238-38995738 ( 60) CAAGCTCAGAAGTGTAGCCTCT 1 chr18:31794993-31795493 ( 28) CAGGCTGGGAAGCACAGCCTTC 1 chr2:47676504-47677004 ( 67) TGGGCTGGGAACTGTAGCCTCT 1 chr5:85452034-85452534 ( 33) AGGGCTGGGAAGGGTAGCCTCC 1 chr4:3755135-3755635 ( 78) ATGGCTGAGAAGCGTAGCCTCA 1 chr1:90926180-90926680 ( 75) CAGGCTTGGAAGTGTATCCTCA 1 chr7:80734324-80734824 ( 8) AAGGGTGGGAAATATAGCCTCC 1 chr9:69085576-69086076 ( 1) CAGGCTAAGAAATGTAGTCTCT 1 chr4:184617464-184617964 ( 5) CAGGCTGGAAAGCGTAGCCTTG 1 chr1:27083794-27084294 ( 72) GAGGCTGGGAACTGTAGTCTCT 1 chr9:83336971-83337471 ( 75) CAGGTGGGGAAACGTAGACTCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGCTGGGAAGYGTAGCCTCY MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 11.151 E= 9.1e-550 -249 184 -442 -191 177 -1310 -210 -191 -217 -1310 192 -349 -249 -1310 195 -449 -1310 192 -442 -191 -349 -442 -342 188 -349 -342 193 -349 -117 -1310 186 -1310 -349 -1310 200 -1310 196 -1310 -1310 -1310 195 -1310 -442 -1310 -79 -342 177 -1310 -1310 43 -342 134 -59 -1310 177 -1310 -1310 -284 -342 188 196 -1310 -1310 -1310 -349 -1310 199 -449 -449 195 -1310 -249 -1310 197 -1310 -249 -1310 -1310 -1310 196 -449 197 -1310 -291 -132 90 -342 71 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGCTGGGAAGYGTAGCCTCY MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 88 E= 9.1e-550 0.045455 0.875000 0.011364 0.068182 0.875000 0.000000 0.056818 0.068182 0.056818 0.000000 0.920455 0.022727 0.045455 0.000000 0.943182 0.011364 0.000000 0.920455 0.011364 0.068182 0.022727 0.011364 0.022727 0.943182 0.022727 0.022727 0.931818 0.022727 0.113636 0.000000 0.886364 0.000000 0.022727 0.000000 0.977273 0.000000 1.000000 0.000000 0.000000 0.000000 0.988636 0.000000 0.011364 0.000000 0.147727 0.022727 0.829545 0.000000 0.000000 0.329545 0.022727 0.647727 0.170455 0.000000 0.829545 0.000000 0.000000 0.034091 0.022727 0.943182 1.000000 0.000000 0.000000 0.000000 0.022727 0.000000 0.965909 0.011364 0.011364 0.943182 0.000000 0.045455 0.000000 0.954545 0.000000 0.045455 0.000000 0.000000 0.000000 1.000000 0.011364 0.954545 0.000000 0.034091 0.102273 0.454545 0.022727 0.420455 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGGCTGGGAAGYGTAGCCTCY MEME-1 regular expression -------------------------------------------------------------------------------- CAGGCTGGGAAG[TC]GTAGCCTC[CT] -------------------------------------------------------------------------------- Time 529.19 secs. ******************************************************************************** ******************************************************************************** MOTIF YTGYTTYTRGCYTCTG MEME-2 width = 16 sites = 187 llr = 2444 E-value = 3.1e-429 ******************************************************************************** -------------------------------------------------------------------------------- Motif YTGYTTYTRGCYTCTG MEME-2 Description -------------------------------------------------------------------------------- Simplified A 1:::::::5:::1:11 pos.-specific C 5::6:132::94:921 probability G 1:a:::1:5a:::::6 matrix T 4a:4a968::168173 bits 2.0 1.8 ** * * 1.6 ** ** * * 1.4 ** ** ** * Relative 1.2 ** ** ** * Entropy 1.0 ***** * ***** (18.9 bits) 0.8 ***** ******** 0.6 ************** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel CTGCTTTTAGCTTCTG consensus T T C G C CT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGYTTYTRGCYTCTG MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr8:19537288-19537788 + 67 2.32e-10 ctcaaagtgt ctgcttttggcttctg ccagagacta chr19:38995238-38995738 + 41 9.61e-10 ttcaaagtgc ctgtttttggcttctg gccagaggct chr10:72857878-72858378 - 34 9.61e-10 CTCAAAGTGT CTGTTTTTGGCTTCTG AATGGAGGCT chr8:74099487-74099987 + 66 9.61e-10 cttgaagtat ctgtttttggcttctg accagagact chr2:235046889-235047389 - 39 9.61e-10 CTTGAAGTGT CTGTTTTTGGCTTCTG GCAGGAGGCT chr9:69085576-69086076 - 26 9.61e-10 CCCTCAGTGT CTGTTTTTGGCTTCTG GCCAGAGACT chr3:9361822-9362322 + 71 9.61e-10 ctggaagtgc ctgtttttggcttctg actggaagct chr11:19769098-19769598 - 50 9.61e-10 TGCTAATGAC TTGCTTTTGGCTTCTG CGCAGGTCCA chr4:176619305-176619805 - 48 9.61e-10 CTCCAGGTGT CTGTTTTTGGCTTCTG ACCAGAGGCT chr11:57735355-57735855 - 30 1.47e-09 CTCCAAGTGT CTGTTTTTAGCTTCTG AGCGGAGGCT chr21:39338121-39338621 + 72 1.47e-09 CCTAAAATAA TTGCTTTTAGCTTCTG GGATTAAATG chr3:86388747-86389247 + 60 1.91e-09 gtcgaagtgt ctgcttctggcttctg gcctgaggct chr6:153483174-153483674 + 56 2.63e-09 cttaaagtgc ttgtttttggcttctg gcaggaggct chr10:70575612-70576112 - 27 4.32e-09 TTCGAAGTGT CTGTTTCTGGCTTCTG GCCAGAGGCT chr10:101163898-10116439 - 22 4.32e-09 CTTGAAGTGC CTGTTTCTGGCTTCTG GCCAGAGGCT chr1:59266234-59266734 - 26 4.32e-09 CTCAAGGTGC CTGTTTCTGGCTTCTG ACCAGAGGCT chr9:135680816-135681316 - 24 4.32e-09 GTGAAAGTGT CTGTTTCTGGCTTCTG GCCTGAGGCT chr6:106911216-106911716 - 43 4.32e-09 CCTTGAAGTG CTGTTTCTGGCTTCTG ACCAGAAGCT chr18:13328196-13328696 + 53 4.32e-09 cttgaagtgc ctgtttctggcttctg gccggaggct chr1:116732361-116732861 - 35 4.32e-09 CCTTAAGTCC TTGCTTCTGGCTTCTG GCCAGAGGCT chr1:226450676-226451176 + 53 4.32e-09 cttggagtat ctgtttctggcttctg actggaggct chr2:47676504-47677004 + 48 4.32e-09 cttaaagtgc ctgtttctggcttctg gccagaggct chr7:157889480-157889980 + 71 4.32e-09 ctagaagtgc ctgtttctggcttctg gccggaggct chr13:102752151-10275265 + 39 4.32e-09 ctccaatggc ctgtttctggcttctg acaggaggct chr1:5965836-5966336 + 22 4.32e-09 ctcgaagggt ctgtttctggcttctg gctggaggct chr8:41076341-41076841 + 37 4.32e-09 cttgaaatgc ctgtttctggcttctg actggaggct chr2:172781064-172781564 - 28 4.32e-09 ACTGAAGTGT CTGTTTCTGGCTTCTG GCTGGAGGCT chr18:31794993-31795493 - 53 4.32e-09 CTCAAAGTGT CTGTTTCTGGCTTCTG ACTGAAGGCT chr20:15774827-15775327 - 34 4.32e-09 CTCAAAGTGT CTGTTTCTGGCTTCTG ACTGGAGGCT chr18:33836596-33837096 + 34 4.32e-09 cccagtgtat ctgtttctggcttctg gccagaggct chr8:15317872-15318372 - 42 4.32e-09 CTCAAAGTGC CTGTTTCTGGCTTCTG GCTGGAGGCT chr4:153211786-153212286 + 45 5.30e-09 GAGgaagtgc ttgcttctagcttctg gcggtaggct chr6:2543072-2543572 + 54 5.30e-09 ttctaagtgt ctgtttctagcttctg gccagaggct chrX:11959030-11959530 - 40 5.30e-09 CTTGAAGTGT CTGTTTCTAGCTTCTG GCCAGAGGCT chr1:231066759-231067259 - 35 7.71e-09 CTTGAAGTGT TTGTTTCTGGCTTCTG ACTGGAGGCT chr6:160053901-160054401 - 33 7.71e-09 CTCCCAGCGC TTGTTTCTGGCTTCTG GCCTGAGGCT chr9:84303714-84304214 + 59 7.71e-09 ctcaaagtac ttgtttctggcttctg ttggagacta chr12:42262233-42262733 + 61 7.71e-09 gtttccacat ttgcttttagcttctt tgccagaggc chr3:13030683-13031183 - 51 7.71e-09 ATTTTGTGCA TTGCTTTTAGCTTCTT ATTGTTGAAA chr13:110986520-11098702 + 66 1.08e-08 cttgaagtgc ctgctttcagcttctg aaagaggcta chr10:25974795-25975295 - 18 1.41e-08 CTCAAAGTGC CTGCTTTTGGCTTCTA CCAGAGGCCA chr3:39022117-39022617 + 49 1.41e-08 cttgaagtgt ctgtttctggcttctt actggaggct chr2:218707708-218708208 - 38 1.75e-08 CTCAAAGTAC TTGCTTTCAGCTTCTG CCAGAAACTA chr8:63153101-63153601 - 58 1.75e-08 CCTCAAGTGT CTGTTTTCAGCTTCTG ACCAGAGGCT chr13:36610500-36611000 - 34 1.75e-08 CTTGAAGTGT CTGTTTTCAGCTTCTG ACCAGAGGCT chr16:74283713-74284213 + 69 2.29e-08 ctcaaagtgc ctgcttttggtttctg ccagaggcta chr11:102684748-10268524 + 56 2.29e-08 AAGAaagtgc ctgcttccagcttctg gctggaggct chr12:92877706-92878206 - 41 2.29e-08 TAGGAAATGC CTGCTTCCAGCTTCTG CTGGAGGCTA chr2:134764761-134765261 + 56 2.71e-08 cttgaagtac ctgcttttagtttctg ctggaggcta chr17:81980420-81980920 - 27 3.73e-08 CTTGAAGTGT CTGTTTCCAGCTTCTG GCTGGAGGCT chr2:113809360-113809860 + 51 3.73e-08 ctcaaaatgt ctgtttccagcttctg cccagaggct chr16:22077588-22078088 + 38 3.73e-08 AAGGGCTGCC TTGCTTTTAGCTTCCT TAAATACATT chr6:7833414-7833914 + 24 3.73e-08 agccacttca ctgcttttggcctcag attcctgttg chr5:10304230-10304730 + 63 3.73e-08 ctggaagggt ctgtttccagcttctg gccagagact chr13:33155570-33156070 - 37 3.73e-08 CCTATTTGTA TTGCTTTTAGCTTCCT GCAAGTAATC chr2:1578489-1578989 + 59 3.73e-08 catgtagtac ctgtttccagcttctg agtggaggct chr2:2900214-2900714 + 38 3.73e-08 ctcctagtgt ctgtttccagcttctg tctggaggct chr21:42620144-42620644 - 31 4.90e-08 CTTGAGGTGC CTGTTTGTGGCTTCTG GCTGGAGGCT chr9:83336971-83337471 + 56 5.74e-08 cttgaagtgc ttgtttccagcttctg gccagagtct chr6:132567508-132568008 + 29 5.74e-08 TTGTGTTTGG TTGCTTTTAGCCTCTA ATCCAAAGAG chr22:44500502-44501002 + 60 6.53e-08 cttgaagtgc ctgtttatggcttctg gccagaggct chr14:39486443-39486943 - 2 6.53e-08 CTTGAAGTAT CTGTTTATGGCTTCTG G chr8:94648231-94648731 - 24 6.53e-08 TTGGACATAA TTGCTTTTAGCCTCAG AAATTGGTCT chr6:101860076-101860576 - 24 6.53e-08 CTCAAAGTAT CTGCTTTTGGCTTCCA ACCAGAGACT chr14:90550255-90550755 + 57 7.41e-08 ctcaaagtgc ttgcttttggtctctg cctgaggcta chr1:90926180-90926680 + 57 7.41e-08 tttgaagggc ttgcttttggtctctg tctgaggata chr7:98066071-98066571 - 34 7.41e-08 CTCCACGTAC CTGCTTCTGGCTTCTC CCTGAGGCTA chr13:97425862-97426362 + 47 7.41e-08 cttgaataac ttgcttttggtctctg cctgaggtta chr5:124747107-124747607 - 35 7.41e-08 CAATTCATTA CTGCTTTTAGCTTCCA AACGCCAGCT chr18:73987173-73987673 + 34 7.41e-08 caactccatc ttgcttttagcctcct aactgcctgg chr10:95812955-95813455 - 33 8.42e-08 CCCTCCAGAT ATGTTTCTGGCTTCTG ACTGGAGGCT chr2:190301981-190302481 - 21 8.42e-08 CTAGAAGTGC TTGCTCTTGGCTTCTG CCAGAGGCTG chr19:29295261-29295761 + 65 1.07e-07 ctgaaagtgt ctgtttctggcttctc atcagaggct chr2:16254507-16255007 + 45 1.07e-07 tacccttgaa ttgtttctggtttctg gccggaggct chr20:16418623-16419123 + 52 1.20e-07 ctcaatgtgt ctgcttctggcttcca gctggaggct chr4:39824979-39825479 + 83 1.20e-07 GAGAACAGAG TTGCTTTTAGCCTCTC TC chr22:29061889-29062389 + 11 1.20e-07 CTATACGGTT TTGCTTCTAGCCTCAG AAACTTCTGA chr4:113435863-113436363 + 53 1.35e-07 GGATGAGTCA TTGCTTTTGGCCTCAT TAATGTGGTG chr18:62310801-62311301 + 46 1.53e-07 ctcaaagtgc ttgctcctggcttctg ccagaggcta chr17:28532048-28532548 + 45 1.53e-07 GTTCTAGTTG TTGCTTTTAGCCACTT GCATCACTCC chr4:173270559-173271059 + 73 1.53e-07 ACATTTATCT TTGCTTTTAGCTGCTG CAGCCCTCTG chr1:204876642-204877142 - 79 1.70e-07 AAGTGC CTGCTTTTGGTTTCTA CCAGAGGCTA chr8:33648777-33649277 - 15 1.70e-07 CTCAAAGTGC TTGCTTTTGGTCTCTT ACAGAGGCTT chr10:79178547-79179047 + 66 1.70e-07 TTCTGCGTGA GTGCTTTTGGCTTCCT GCCCTTGGAG chr14:69716061-69716561 - 9 1.92e-07 CAGCTATCTT TTGCTTTTGGCTTCCC TGAATGCA chr5:160501318-160501818 - 5 1.92e-07 CTCAGAGTAT CTGTTTTGGGCTTCTG ACCA chr14:103269850-10327035 + 79 1.92e-07 ctccaaatat ctgtttctagcttcca gccaga chr1:232223214-232223714 + 42 2.14e-07 ctcagagtgc ctatttctggcttctg gcttctggct chr4:6526013-6526513 + 82 2.14e-07 ctggaaatgc ctgcttctggctcctg cca chr14:77091203-77091703 - 29 2.14e-07 CTTGAAGTGA TTGCTCTTAGCTTCTT CTGAAGGTTA chr6:37665716-37666216 + 59 2.40e-07 ttcaaagtga ctgctttcagtctctg ccagaggcta chr4:3755135-3755635 + 59 2.40e-07 ctcaaaatgt ctgtttgcagcttctg gcctgaggct chr2:69646919-69647419 + 68 2.40e-07 ctctaaatac ctgctttcagtctctg ccagagtcta chr15:26724585-26725085 + 66 2.40e-07 ctcaaagtat ctgtttccagcttcta atgggaggct chr1:34637039-34637539 - 3 2.40e-07 CTTGTAGTGC TTGCTTTTGGTTTCTA CT chr8:144068040-144068540 + 40 2.70e-07 catgaagtgt ctgtttttgacttctg actggaggct chr4:184617464-184617964 - 30 2.70e-07 TTTGAAATAT GTGTTTCCAGCTTCTG GCCCAAGGCT chr6:143841056-143841556 - 34 3.00e-07 CTCAGAATGT ATGTTTTTGGCTTCAG GCTGGAGGCT chr19:43662421-43662921 + 43 3.00e-07 tccagccaca ctgcttttggccacct ttgtatctgc chr14:31241471-31241971 - 33 3.36e-07 CTTGAAGTGC CTGTTTCTGGCCTTTG GCCAGAGGCT chr20:41411283-41411783 - 5 3.36e-07 ATACATAAAT GTGCTTTTAGCCTCCT AAAA chr5:77029734-77030234 + 37 3.75e-07 ttccaagtgt ctgttctcagcttctg accagaggct chr3:99925551-99926051 - 55 3.75e-07 TCTGACTGTG ATGCTTTTGGCCACTG GCATGTTCTT chr2:85721004-85721504 - 24 3.75e-07 CTCAAAGTGC CTGTTCTCAGCTTCTG ACCCAAGGCT chr7:80734324-80734824 - 33 4.16e-07 ATGGAAGTAT CTGATTCTGGCTTCTG ACTGGAGGCT chr14:100265249-10026574 + 54 4.16e-07 TACCGTTTTG ATGCTTTTAGCCACTG CTCATTAGAT chr2:176731658-176732158 - 61 4.62e-07 TAAATTTCTG TTGCTTTTAGCCACCT AGTTTGTAGT chr5:59771407-59771907 + 12 4.62e-07 GTTCTAGTTC TTGCTTTTAGCCACCT TGTAGAAGAG chr5:22025989-22026489 - 25 4.62e-07 CCCATTTGTG TTGCTTTTAGCCACCT GCAAATAATC chr2:109418124-109418624 - 15 4.62e-07 CAGCTTTCTG TTGCTTTTAGCCACCT AGTTTGTGGT chr17:65228908-65229408 + 44 5.11e-07 AGCCCCTGAC TTGCTTTTAACCTCTG ACAACTTATT chr5:113187166-113187666 - 65 6.23e-07 TGAGTTGACA GTGCTTTTAGCCTCAT CTTCTTAAAA chr1:100036721-100037221 - 32 6.87e-07 TGTCCAGGAA CTGTTTGTAGCCTCCT ACCAAATGCC chr12:6092747-6093247 + 48 6.87e-07 cttgaagtgc ctgctttcagtttcta ccagaggcta chr1:150196425-150196925 + 48 6.87e-07 ctcaaagtgc ctgctttcagtttcta ccagaggcta chrX:1511188-1511688 + 45 6.87e-07 ttcgaaatgt ctacttttagtttctg ccagaggcta chr3:184952280-184952780 - 38 6.87e-07 CTTGAACTGC TTATTTTCAGCTTCTG CCAGAGGCTA chr16:85551532-85552032 - 49 8.33e-07 CAAGCCCTAA TTGCTTTTAGCCACAT CCTCGGGAAG chr6:32868089-32868589 + 27 8.33e-07 ACACATCTAA TTACTTTTAGCTTCCT TCACAGTAGG chr11:95593062-95593562 - 56 8.33e-07 GGATTGCATT TTGCTTTTAGCTGCAG TCTTGTGTAG chr22:39452117-39452617 - 31 8.33e-07 CTTGAAGCAT GTGTTCCTGGCTTCTG GCTGGAAGCT chr5:59303204-59303704 + 27 9.16e-07 tttattgcat ttgcttttgggttctt ggtcatgaaa chr18:50552485-50552985 + 43 9.16e-07 ctcaaagtgt ctgcttttggtctttg ctggaggcta chr5:174335917-174336417 - 41 9.16e-07 CTCAAGGGTA GTGCTTTTGGCTTTTT ATGGCCTCAG chr3:159883349-159883849 - 29 1.01e-06 AAGGATTTGT TTGCTTTTAGCCTTTA AGCGGGTTTT chr13:113383001-11338350 + 45 1.01e-06 tttattgcat ttgcttttaggttctt ggtcatgaaa chr4:3852691-3853191 + 55 1.11e-06 ctcgaaatgt ctgtttcctgcttctg acctgaggct chr9:32498171-32498671 + 50 1.11e-06 ctccaagtgc ctgtttcctgcttctg gcccgaggct chr5:168477347-168477847 + 73 1.11e-06 ctcaaagtgc atgttttcagctactg gctggaggct chr5:126885501-126886001 + 45 1.22e-06 GTCAAGTTAA TTGCTTTTAGCCTTCT AGACTAGAGA chr19:35605647-35606147 + 20 1.22e-06 ctggaggtgc ctgctctcagcttcta ccggaggcta chr9:109474103-109474603 + 20 1.34e-06 TTGTTTACAA TTACTTTTAGCCTCCT TGGTTGCTAC chr8:37233927-37234427 + 54 1.34e-06 TACGGCTGCT TTGCTTTTAGCCGCAG CTAGAGGCAT chr13:35740440-35740940 + 47 1.34e-06 tctgaaatgc ctgcttgtggtttcta ccagaagcta chr11:66637292-66637792 + 71 1.34e-06 AAACTCTGCA CTGCTTTTAGCCTGTT TTGTTCGTGT chr4:80074547-80075047 - 30 1.46e-06 CTCAAAGTGC CTGCTTTTTGTCTCTG CCAGAGGCTA chr17:41360219-41360719 - 35 1.46e-06 CTCAAAATGC TTACTCTTGGCTTCTG CCAGAGGCTA chr6:106829667-106830167 + 48 1.46e-06 catgaagtgc ctgttactggcttctg accggaggct chr5:144037403-144037903 - 39 1.46e-06 CCCATTTGTA TTGCTTTTAGCCGCCT GCAAGAAATG chr15:66283803-66284303 + 50 1.46e-06 AGATTGGCAG GTGCTTTTAGCTTCAC GGAGGGGGAA chr11:60925417-60925917 + 73 1.46e-06 AGCTGTGGGG TTGCTTTCAGCCACCT GCTCCCCATC chr12:88434540-88435040 - 53 1.46e-06 CCCACTTGTA TTGCTTTTAGCCGCCT GCAAATAATC chr1:109769203-109769703 + 22 1.60e-06 agtttgagag gtgttttgggcctctg ggtggaagta chr14:19775128-19775628 + 28 1.75e-06 ctcgaaatat ttgtttgtggctcctg gccagaggct chr1:162976538-162977038 - 34 1.75e-06 TCCATGTGTG TTGTTTTAAGCCTCTA AGTGTGTGGT chr1:46387843-46388343 - 13 1.75e-06 TGTGGATGAT TTGCTTTTAGCCACCC ATTCAGAAAC chr5:90546996-90547496 + 34 1.92e-06 GTGTCTTTGT TTGCTTGCAGCCACTG GTAAAACAAA chr17:78872377-78872877 - 52 2.09e-06 TGCCCAGGAA ATGCTTTTAGCCTTTT GGCAAATGAT chr8:140821815-140822315 + 37 2.28e-06 GATTTGAGTA CTGCTTGTAGCCACCT ACATGATGTT chr9:136738025-136738525 - 35 2.70e-06 CTCCAAGTGT CTGTTCCAGGCTTCTG GCCTGAGGCT chr18:13721287-13721787 + 42 2.70e-06 gaatgcggta ttgcttttggcttact attattccag chr1:111586910-111587410 - 51 2.93e-06 ATCTATATAA TTGCTTGTAGCCACCT GGATGCAGAA chr1:234256611-234257111 + 59 2.93e-06 cttgaagtgc ttgctcccagcttcct ggccagaggc chr10:86879511-86880011 - 46 2.93e-06 GCACTGATAA TTGCTTTTAGCCACAC ACTGCTGGAC chr19:16106044-16106544 + 70 2.93e-06 TGTTTTAGTC ATGCTTATGGCCTCAG CACTTCACAC chr6:17715081-17715581 + 62 3.19e-06 AGACCCAGGA TTGATTTTAGCTTCAT CCTTGCTGAT chr12:121748746-12174924 + 61 3.19e-06 AGAGAGAGAG CTGCTTACAGCCTCAT ATCATCATGA chr12:29530407-29530907 + 68 3.46e-06 ttcaaagcac ctgcttttgctttctg cgggaggcta chr1:21991522-21992022 - 9 3.75e-06 TTTGGAGTGC CTGTTTCTGATCTCTG CAGGAGGC chr1:78620124-78620624 + 9 4.07e-06 TTTTTTTG CTGCTTTGAGTTTCAG GTTTCTTTCT chr5:71946183-71946683 - 45 4.41e-06 CTCAAAGTGC AGGTTTCTGGCTTCTG GCCGGAGGCT chr5:73103727-73104227 + 56 4.41e-06 ttcgaagtgc aggtttctggcttctg gccagaggct chr1:227628500-227629000 - 38 5.17e-06 TGTGGATGAT TTACTTTTAGCCACCT GTTCAGAAAC chr1:232866831-232867331 - 30 5.17e-06 TTCACAGTGC TTGCTCATGGCCTCTA CCGGAGGCTA chr17:81376054-81376554 - 37 5.59e-06 TGCAATGGTG TTGCTTTAGGCCACCT GACTGGGGAA chr1:153505866-153506366 - 61 5.59e-06 CATGTAAGAA GTGCCTTTGGCCTCCT ACCATGATTC chr13:37138264-37138764 + 24 6.05e-06 aataaattta ttgctttaagccacct agttcatggt chr5:72281969-72282469 + 58 6.05e-06 AGGAATTTAT TTGCCTTTGGCCTCAA AAACCATGAT chr17:73092613-73093113 - 70 6.05e-06 CTTTCCTTGG GTGTTTGTAGCTTCCC TTAGGGCTGC chr12:26884898-26885398 + 81 7.04e-06 cgagggacaa atgcttttagcctatt gata chr7:116786151-116786651 - 40 8.18e-06 TACTGAATAA TTGCTTTTGGACTCTC AAAAGCATAT chr15:84914912-84915412 + 51 8.80e-06 CGTGCTGGAG GTGTTTCTAGCCCCAG GCGGGAGGAG chr6:154613305-154613805 + 5 1.09e-05 TGGG CTGCTTTTAGCCATAA CGTCATATGT chr14:50961926-50962426 + 55 1.18e-05 ataggctgtg atgcttatagccacct acatattcct chr14:68088970-68089470 + 39 1.36e-05 TTTGTTCAAG TTGCTTTTGGTCCTTG CTGGGAAATG chr10:120850979-12085147 - 48 1.45e-05 CCAGGTTCCG TTGCCTTCAGTTTCCT AGGATCCTAG chr10:44932673-44933173 + 51 1.67e-05 TAAGAGAGCA GTGCTTTGGGCCACCT GGACAGCCTG chr19:7179877-7180377 + 60 1.67e-05 tcctaaagga gtgttttaagccacta agcactgagg chr4:88456703-88457203 + 54 1.67e-05 CAACGACCTG TTGCCTTTGGCCGCCT GCCAAGTCAC chr6:129771936-129772436 + 48 1.79e-05 cctcaagtat ttgtctccagctcctg accagaggct chr3:23957879-23958379 + 36 2.04e-05 GTAAAGGCAG CTGTTTGTAGCCATCT AGTTGGGAAC chr8:24940262-24940762 + 61 2.19e-05 ggcagagtgc ctgcttttagtctgca caggaggctc chr19:1383513-1384013 - 72 2.19e-05 AGGTTCCGCT GCGCTTTCGGCCTCCG TGGTCGTGTT chrX:73916943-73917443 + 1 2.33e-05 . GTATTTATAGCCTCAG CTGAACTTTT chr7:128899399-128899899 + 2 2.49e-05 g ctatttacagcttttg gcaattgagt chr5:170190689-170191189 - 39 3.22e-05 TACGGCTGTG GTGTTTGTGGTCACCT ATCTGCAAGT chr10:93208963-93209463 + 40 4.67e-05 TATGATCTCA CTGTTTATGACCTCAC TGCTTATGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGYTTYTRGCYTCTG MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:19537288-19537788 2.3e-10 66_[+2]_18 chr19:38995238-38995738 9.6e-10 40_[+2]_44 chr10:72857878-72858378 9.6e-10 33_[-2]_51 chr8:74099487-74099987 9.6e-10 65_[+2]_19 chr2:235046889-235047389 9.6e-10 38_[-2]_46 chr9:69085576-69086076 9.6e-10 25_[-2]_59 chr3:9361822-9362322 9.6e-10 70_[+2]_14 chr11:19769098-19769598 9.6e-10 49_[-2]_35 chr4:176619305-176619805 9.6e-10 47_[-2]_37 chr11:57735355-57735855 1.5e-09 29_[-2]_55 chr21:39338121-39338621 1.5e-09 71_[+2]_13 chr3:86388747-86389247 1.9e-09 59_[+2]_25 chr6:153483174-153483674 2.6e-09 55_[+2]_29 chr10:70575612-70576112 4.3e-09 26_[-2]_58 chr10:101163898-10116439 4.3e-09 21_[-2]_63 chr1:59266234-59266734 4.3e-09 25_[-2]_59 chr9:135680816-135681316 4.3e-09 23_[-2]_61 chr6:106911216-106911716 4.3e-09 42_[-2]_42 chr18:13328196-13328696 4.3e-09 52_[+2]_32 chr1:116732361-116732861 4.3e-09 34_[-2]_50 chr1:226450676-226451176 4.3e-09 52_[+2]_32 chr2:47676504-47677004 4.3e-09 47_[+2]_37 chr7:157889480-157889980 4.3e-09 70_[+2]_14 chr13:102752151-10275265 4.3e-09 38_[+2]_46 chr1:5965836-5966336 4.3e-09 21_[+2]_63 chr8:41076341-41076841 4.3e-09 36_[+2]_48 chr2:172781064-172781564 4.3e-09 27_[-2]_57 chr18:31794993-31795493 4.3e-09 52_[-2]_32 chr20:15774827-15775327 4.3e-09 33_[-2]_51 chr18:33836596-33837096 4.3e-09 33_[+2]_51 chr8:15317872-15318372 4.3e-09 41_[-2]_43 chr4:153211786-153212286 5.3e-09 44_[+2]_40 chr6:2543072-2543572 5.3e-09 53_[+2]_31 chrX:11959030-11959530 5.3e-09 39_[-2]_45 chr1:231066759-231067259 7.7e-09 34_[-2]_50 chr6:160053901-160054401 7.7e-09 32_[-2]_52 chr9:84303714-84304214 7.7e-09 58_[+2]_26 chr12:42262233-42262733 7.7e-09 60_[+2]_24 chr3:13030683-13031183 7.7e-09 50_[-2]_34 chr13:110986520-11098702 1.1e-08 65_[+2]_19 chr10:25974795-25975295 1.4e-08 17_[-2]_67 chr3:39022117-39022617 1.4e-08 48_[+2]_36 chr2:218707708-218708208 1.8e-08 37_[-2]_47 chr8:63153101-63153601 1.8e-08 57_[-2]_27 chr13:36610500-36611000 1.8e-08 33_[-2]_51 chr16:74283713-74284213 2.3e-08 68_[+2]_16 chr11:102684748-10268524 2.3e-08 55_[+2]_29 chr12:92877706-92878206 2.3e-08 40_[-2]_44 chr2:134764761-134765261 2.7e-08 55_[+2]_29 chr17:81980420-81980920 3.7e-08 26_[-2]_58 chr2:113809360-113809860 3.7e-08 50_[+2]_34 chr16:22077588-22078088 3.7e-08 37_[+2]_47 chr6:7833414-7833914 3.7e-08 23_[+2]_61 chr5:10304230-10304730 3.7e-08 62_[+2]_22 chr13:33155570-33156070 3.7e-08 36_[-2]_48 chr2:1578489-1578989 3.7e-08 58_[+2]_26 chr2:2900214-2900714 3.7e-08 37_[+2]_47 chr21:42620144-42620644 4.9e-08 30_[-2]_54 chr9:83336971-83337471 5.7e-08 55_[+2]_29 chr6:132567508-132568008 5.7e-08 28_[+2]_56 chr22:44500502-44501002 6.5e-08 59_[+2]_25 chr14:39486443-39486943 6.5e-08 1_[-2]_83 chr8:94648231-94648731 6.5e-08 23_[-2]_61 chr6:101860076-101860576 6.5e-08 23_[-2]_61 chr14:90550255-90550755 7.4e-08 56_[+2]_28 chr1:90926180-90926680 7.4e-08 56_[+2]_28 chr7:98066071-98066571 7.4e-08 33_[-2]_51 chr13:97425862-97426362 7.4e-08 46_[+2]_38 chr5:124747107-124747607 7.4e-08 34_[-2]_50 chr18:73987173-73987673 7.4e-08 33_[+2]_51 chr10:95812955-95813455 8.4e-08 32_[-2]_52 chr2:190301981-190302481 8.4e-08 20_[-2]_64 chr19:29295261-29295761 1.1e-07 64_[+2]_20 chr2:16254507-16255007 1.1e-07 44_[+2]_40 chr20:16418623-16419123 1.2e-07 51_[+2]_33 chr4:39824979-39825479 1.2e-07 82_[+2]_2 chr22:29061889-29062389 1.2e-07 10_[+2]_74 chr4:113435863-113436363 1.4e-07 52_[+2]_32 chr18:62310801-62311301 1.5e-07 45_[+2]_39 chr17:28532048-28532548 1.5e-07 44_[+2]_40 chr4:173270559-173271059 1.5e-07 72_[+2]_12 chr1:204876642-204877142 1.7e-07 78_[-2]_6 chr8:33648777-33649277 1.7e-07 14_[-2]_70 chr10:79178547-79179047 1.7e-07 65_[+2]_19 chr14:69716061-69716561 1.9e-07 8_[-2]_76 chr5:160501318-160501818 1.9e-07 4_[-2]_80 chr14:103269850-10327035 1.9e-07 78_[+2]_6 chr1:232223214-232223714 2.1e-07 41_[+2]_43 chr4:6526013-6526513 2.1e-07 81_[+2]_3 chr14:77091203-77091703 2.1e-07 28_[-2]_56 chr6:37665716-37666216 2.4e-07 58_[+2]_26 chr4:3755135-3755635 2.4e-07 58_[+2]_26 chr2:69646919-69647419 2.4e-07 67_[+2]_17 chr15:26724585-26725085 2.4e-07 65_[+2]_19 chr1:34637039-34637539 2.4e-07 2_[-2]_82 chr8:144068040-144068540 2.7e-07 39_[+2]_45 chr4:184617464-184617964 2.7e-07 29_[-2]_55 chr6:143841056-143841556 3e-07 33_[-2]_51 chr19:43662421-43662921 3e-07 42_[+2]_42 chr14:31241471-31241971 3.4e-07 32_[-2]_52 chr20:41411283-41411783 3.4e-07 4_[-2]_80 chr5:77029734-77030234 3.8e-07 36_[+2]_48 chr3:99925551-99926051 3.8e-07 54_[-2]_30 chr2:85721004-85721504 3.8e-07 23_[-2]_61 chr7:80734324-80734824 4.2e-07 32_[-2]_52 chr14:100265249-10026574 4.2e-07 53_[+2]_31 chr2:176731658-176732158 4.6e-07 60_[-2]_24 chr5:59771407-59771907 4.6e-07 11_[+2]_73 chr5:22025989-22026489 4.6e-07 24_[-2]_60 chr2:109418124-109418624 4.6e-07 14_[-2]_70 chr17:65228908-65229408 5.1e-07 43_[+2]_41 chr5:113187166-113187666 6.2e-07 64_[-2]_20 chr1:100036721-100037221 6.9e-07 31_[-2]_53 chr12:6092747-6093247 6.9e-07 47_[+2]_37 chr1:150196425-150196925 6.9e-07 47_[+2]_37 chrX:1511188-1511688 6.9e-07 44_[+2]_40 chr3:184952280-184952780 6.9e-07 37_[-2]_47 chr16:85551532-85552032 8.3e-07 48_[-2]_36 chr6:32868089-32868589 8.3e-07 26_[+2]_58 chr11:95593062-95593562 8.3e-07 55_[-2]_29 chr22:39452117-39452617 8.3e-07 30_[-2]_54 chr5:59303204-59303704 9.2e-07 26_[+2]_58 chr18:50552485-50552985 9.2e-07 42_[+2]_42 chr5:174335917-174336417 9.2e-07 40_[-2]_44 chr3:159883349-159883849 1e-06 28_[-2]_56 chr13:113383001-11338350 1e-06 44_[+2]_40 chr4:3852691-3853191 1.1e-06 54_[+2]_30 chr9:32498171-32498671 1.1e-06 49_[+2]_35 chr5:168477347-168477847 1.1e-06 72_[+2]_12 chr5:126885501-126886001 1.2e-06 44_[+2]_40 chr19:35605647-35606147 1.2e-06 19_[+2]_65 chr9:109474103-109474603 1.3e-06 19_[+2]_65 chr8:37233927-37234427 1.3e-06 53_[+2]_31 chr13:35740440-35740940 1.3e-06 46_[+2]_38 chr11:66637292-66637792 1.3e-06 70_[+2]_14 chr4:80074547-80075047 1.5e-06 29_[-2]_55 chr17:41360219-41360719 1.5e-06 34_[-2]_50 chr6:106829667-106830167 1.5e-06 47_[+2]_37 chr5:144037403-144037903 1.5e-06 38_[-2]_46 chr15:66283803-66284303 1.5e-06 49_[+2]_35 chr11:60925417-60925917 1.5e-06 72_[+2]_12 chr12:88434540-88435040 1.5e-06 52_[-2]_32 chr1:109769203-109769703 1.6e-06 21_[+2]_63 chr14:19775128-19775628 1.8e-06 27_[+2]_57 chr1:162976538-162977038 1.8e-06 33_[-2]_51 chr1:46387843-46388343 1.8e-06 12_[-2]_72 chr5:90546996-90547496 1.9e-06 33_[+2]_51 chr17:78872377-78872877 2.1e-06 51_[-2]_33 chr8:140821815-140822315 2.3e-06 36_[+2]_48 chr9:136738025-136738525 2.7e-06 34_[-2]_50 chr18:13721287-13721787 2.7e-06 41_[+2]_43 chr1:111586910-111587410 2.9e-06 50_[-2]_34 chr1:234256611-234257111 2.9e-06 58_[+2]_26 chr10:86879511-86880011 2.9e-06 45_[-2]_39 chr19:16106044-16106544 2.9e-06 69_[+2]_15 chr6:17715081-17715581 3.2e-06 61_[+2]_23 chr12:121748746-12174924 3.2e-06 60_[+2]_24 chr12:29530407-29530907 3.5e-06 67_[+2]_17 chr1:21991522-21992022 3.8e-06 8_[-2]_76 chr1:78620124-78620624 4.1e-06 8_[+2]_76 chr5:71946183-71946683 4.4e-06 44_[-2]_40 chr5:73103727-73104227 4.4e-06 55_[+2]_29 chr1:227628500-227629000 5.2e-06 37_[-2]_47 chr1:232866831-232867331 5.2e-06 29_[-2]_55 chr17:81376054-81376554 5.6e-06 36_[-2]_48 chr1:153505866-153506366 5.6e-06 60_[-2]_24 chr13:37138264-37138764 6e-06 23_[+2]_61 chr5:72281969-72282469 6e-06 57_[+2]_27 chr17:73092613-73093113 6e-06 69_[-2]_15 chr12:26884898-26885398 7e-06 80_[+2]_4 chr7:116786151-116786651 8.2e-06 39_[-2]_45 chr15:84914912-84915412 8.8e-06 50_[+2]_34 chr6:154613305-154613805 1.1e-05 4_[+2]_80 chr14:50961926-50962426 1.2e-05 54_[+2]_30 chr14:68088970-68089470 1.4e-05 38_[+2]_46 chr10:120850979-12085147 1.5e-05 47_[-2]_37 chr10:44932673-44933173 1.7e-05 50_[+2]_34 chr19:7179877-7180377 1.7e-05 59_[+2]_25 chr4:88456703-88457203 1.7e-05 53_[+2]_31 chr6:129771936-129772436 1.8e-05 47_[+2]_37 chr3:23957879-23958379 2e-05 35_[+2]_49 chr8:24940262-24940762 2.2e-05 60_[+2]_24 chr19:1383513-1384013 2.2e-05 71_[-2]_13 chrX:73916943-73917443 2.3e-05 [+2]_84 chr7:128899399-128899899 2.5e-05 1_[+2]_83 chr5:170190689-170191189 3.2e-05 38_[-2]_46 chr10:93208963-93209463 4.7e-05 39_[+2]_45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGYTTYTRGCYTCTG MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YTGYTTYTRGCYTCTG width=16 seqs=187 chr8:19537288-19537788 ( 67) CTGCTTTTGGCTTCTG 1 chr19:38995238-38995738 ( 41) CTGTTTTTGGCTTCTG 1 chr10:72857878-72858378 ( 34) CTGTTTTTGGCTTCTG 1 chr8:74099487-74099987 ( 66) CTGTTTTTGGCTTCTG 1 chr2:235046889-235047389 ( 39) CTGTTTTTGGCTTCTG 1 chr9:69085576-69086076 ( 26) CTGTTTTTGGCTTCTG 1 chr3:9361822-9362322 ( 71) CTGTTTTTGGCTTCTG 1 chr11:19769098-19769598 ( 50) TTGCTTTTGGCTTCTG 1 chr4:176619305-176619805 ( 48) CTGTTTTTGGCTTCTG 1 chr11:57735355-57735855 ( 30) CTGTTTTTAGCTTCTG 1 chr21:39338121-39338621 ( 72) TTGCTTTTAGCTTCTG 1 chr3:86388747-86389247 ( 60) CTGCTTCTGGCTTCTG 1 chr6:153483174-153483674 ( 56) TTGTTTTTGGCTTCTG 1 chr10:70575612-70576112 ( 27) CTGTTTCTGGCTTCTG 1 chr10:101163898-10116439 ( 22) CTGTTTCTGGCTTCTG 1 chr1:59266234-59266734 ( 26) CTGTTTCTGGCTTCTG 1 chr9:135680816-135681316 ( 24) CTGTTTCTGGCTTCTG 1 chr6:106911216-106911716 ( 43) CTGTTTCTGGCTTCTG 1 chr18:13328196-13328696 ( 53) CTGTTTCTGGCTTCTG 1 chr1:116732361-116732861 ( 35) TTGCTTCTGGCTTCTG 1 chr1:226450676-226451176 ( 53) CTGTTTCTGGCTTCTG 1 chr2:47676504-47677004 ( 48) CTGTTTCTGGCTTCTG 1 chr7:157889480-157889980 ( 71) CTGTTTCTGGCTTCTG 1 chr13:102752151-10275265 ( 39) CTGTTTCTGGCTTCTG 1 chr1:5965836-5966336 ( 22) CTGTTTCTGGCTTCTG 1 chr8:41076341-41076841 ( 37) CTGTTTCTGGCTTCTG 1 chr2:172781064-172781564 ( 28) CTGTTTCTGGCTTCTG 1 chr18:31794993-31795493 ( 53) CTGTTTCTGGCTTCTG 1 chr20:15774827-15775327 ( 34) CTGTTTCTGGCTTCTG 1 chr18:33836596-33837096 ( 34) CTGTTTCTGGCTTCTG 1 chr8:15317872-15318372 ( 42) CTGTTTCTGGCTTCTG 1 chr4:153211786-153212286 ( 45) TTGCTTCTAGCTTCTG 1 chr6:2543072-2543572 ( 54) CTGTTTCTAGCTTCTG 1 chrX:11959030-11959530 ( 40) CTGTTTCTAGCTTCTG 1 chr1:231066759-231067259 ( 35) TTGTTTCTGGCTTCTG 1 chr6:160053901-160054401 ( 33) TTGTTTCTGGCTTCTG 1 chr9:84303714-84304214 ( 59) TTGTTTCTGGCTTCTG 1 chr12:42262233-42262733 ( 61) TTGCTTTTAGCTTCTT 1 chr3:13030683-13031183 ( 51) TTGCTTTTAGCTTCTT 1 chr13:110986520-11098702 ( 66) CTGCTTTCAGCTTCTG 1 chr10:25974795-25975295 ( 18) CTGCTTTTGGCTTCTA 1 chr3:39022117-39022617 ( 49) CTGTTTCTGGCTTCTT 1 chr2:218707708-218708208 ( 38) TTGCTTTCAGCTTCTG 1 chr8:63153101-63153601 ( 58) CTGTTTTCAGCTTCTG 1 chr13:36610500-36611000 ( 34) CTGTTTTCAGCTTCTG 1 chr16:74283713-74284213 ( 69) CTGCTTTTGGTTTCTG 1 chr11:102684748-10268524 ( 56) CTGCTTCCAGCTTCTG 1 chr12:92877706-92878206 ( 41) CTGCTTCCAGCTTCTG 1 chr2:134764761-134765261 ( 56) CTGCTTTTAGTTTCTG 1 chr17:81980420-81980920 ( 27) CTGTTTCCAGCTTCTG 1 chr2:113809360-113809860 ( 51) CTGTTTCCAGCTTCTG 1 chr16:22077588-22078088 ( 38) TTGCTTTTAGCTTCCT 1 chr6:7833414-7833914 ( 24) CTGCTTTTGGCCTCAG 1 chr5:10304230-10304730 ( 63) CTGTTTCCAGCTTCTG 1 chr13:33155570-33156070 ( 37) TTGCTTTTAGCTTCCT 1 chr2:1578489-1578989 ( 59) CTGTTTCCAGCTTCTG 1 chr2:2900214-2900714 ( 38) CTGTTTCCAGCTTCTG 1 chr21:42620144-42620644 ( 31) CTGTTTGTGGCTTCTG 1 chr9:83336971-83337471 ( 56) TTGTTTCCAGCTTCTG 1 chr6:132567508-132568008 ( 29) TTGCTTTTAGCCTCTA 1 chr22:44500502-44501002 ( 60) CTGTTTATGGCTTCTG 1 chr14:39486443-39486943 ( 2) CTGTTTATGGCTTCTG 1 chr8:94648231-94648731 ( 24) TTGCTTTTAGCCTCAG 1 chr6:101860076-101860576 ( 24) CTGCTTTTGGCTTCCA 1 chr14:90550255-90550755 ( 57) TTGCTTTTGGTCTCTG 1 chr1:90926180-90926680 ( 57) TTGCTTTTGGTCTCTG 1 chr7:98066071-98066571 ( 34) CTGCTTCTGGCTTCTC 1 chr13:97425862-97426362 ( 47) TTGCTTTTGGTCTCTG 1 chr5:124747107-124747607 ( 35) CTGCTTTTAGCTTCCA 1 chr18:73987173-73987673 ( 34) TTGCTTTTAGCCTCCT 1 chr10:95812955-95813455 ( 33) ATGTTTCTGGCTTCTG 1 chr2:190301981-190302481 ( 21) TTGCTCTTGGCTTCTG 1 chr19:29295261-29295761 ( 65) CTGTTTCTGGCTTCTC 1 chr2:16254507-16255007 ( 45) TTGTTTCTGGTTTCTG 1 chr20:16418623-16419123 ( 52) CTGCTTCTGGCTTCCA 1 chr4:39824979-39825479 ( 83) TTGCTTTTAGCCTCTC 1 chr22:29061889-29062389 ( 11) TTGCTTCTAGCCTCAG 1 chr4:113435863-113436363 ( 53) TTGCTTTTGGCCTCAT 1 chr18:62310801-62311301 ( 46) TTGCTCCTGGCTTCTG 1 chr17:28532048-28532548 ( 45) TTGCTTTTAGCCACTT 1 chr4:173270559-173271059 ( 73) TTGCTTTTAGCTGCTG 1 chr1:204876642-204877142 ( 79) CTGCTTTTGGTTTCTA 1 chr8:33648777-33649277 ( 15) TTGCTTTTGGTCTCTT 1 chr10:79178547-79179047 ( 66) GTGCTTTTGGCTTCCT 1 chr14:69716061-69716561 ( 9) TTGCTTTTGGCTTCCC 1 chr5:160501318-160501818 ( 5) CTGTTTTGGGCTTCTG 1 chr14:103269850-10327035 ( 79) CTGTTTCTAGCTTCCA 1 chr1:232223214-232223714 ( 42) CTATTTCTGGCTTCTG 1 chr4:6526013-6526513 ( 82) CTGCTTCTGGCTCCTG 1 chr14:77091203-77091703 ( 29) TTGCTCTTAGCTTCTT 1 chr6:37665716-37666216 ( 59) CTGCTTTCAGTCTCTG 1 chr4:3755135-3755635 ( 59) CTGTTTGCAGCTTCTG 1 chr2:69646919-69647419 ( 68) CTGCTTTCAGTCTCTG 1 chr15:26724585-26725085 ( 66) CTGTTTCCAGCTTCTA 1 chr1:34637039-34637539 ( 3) TTGCTTTTGGTTTCTA 1 chr8:144068040-144068540 ( 40) CTGTTTTTGACTTCTG 1 chr4:184617464-184617964 ( 30) GTGTTTCCAGCTTCTG 1 chr6:143841056-143841556 ( 34) ATGTTTTTGGCTTCAG 1 chr19:43662421-43662921 ( 43) CTGCTTTTGGCCACCT 1 chr14:31241471-31241971 ( 33) CTGTTTCTGGCCTTTG 1 chr20:41411283-41411783 ( 5) GTGCTTTTAGCCTCCT 1 chr5:77029734-77030234 ( 37) CTGTTCTCAGCTTCTG 1 chr3:99925551-99926051 ( 55) ATGCTTTTGGCCACTG 1 chr2:85721004-85721504 ( 24) CTGTTCTCAGCTTCTG 1 chr7:80734324-80734824 ( 33) CTGATTCTGGCTTCTG 1 chr14:100265249-10026574 ( 54) ATGCTTTTAGCCACTG 1 chr2:176731658-176732158 ( 61) TTGCTTTTAGCCACCT 1 chr5:59771407-59771907 ( 12) TTGCTTTTAGCCACCT 1 chr5:22025989-22026489 ( 25) TTGCTTTTAGCCACCT 1 chr2:109418124-109418624 ( 15) TTGCTTTTAGCCACCT 1 chr17:65228908-65229408 ( 44) TTGCTTTTAACCTCTG 1 chr5:113187166-113187666 ( 65) GTGCTTTTAGCCTCAT 1 chr1:100036721-100037221 ( 32) CTGTTTGTAGCCTCCT 1 chr12:6092747-6093247 ( 48) CTGCTTTCAGTTTCTA 1 chr1:150196425-150196925 ( 48) CTGCTTTCAGTTTCTA 1 chrX:1511188-1511688 ( 45) CTACTTTTAGTTTCTG 1 chr3:184952280-184952780 ( 38) TTATTTTCAGCTTCTG 1 chr16:85551532-85552032 ( 49) TTGCTTTTAGCCACAT 1 chr6:32868089-32868589 ( 27) TTACTTTTAGCTTCCT 1 chr11:95593062-95593562 ( 56) TTGCTTTTAGCTGCAG 1 chr22:39452117-39452617 ( 31) GTGTTCCTGGCTTCTG 1 chr5:59303204-59303704 ( 27) TTGCTTTTGGGTTCTT 1 chr18:50552485-50552985 ( 43) CTGCTTTTGGTCTTTG 1 chr5:174335917-174336417 ( 41) GTGCTTTTGGCTTTTT 1 chr3:159883349-159883849 ( 29) TTGCTTTTAGCCTTTA 1 chr13:113383001-11338350 ( 45) TTGCTTTTAGGTTCTT 1 chr4:3852691-3853191 ( 55) CTGTTTCCTGCTTCTG 1 chr9:32498171-32498671 ( 50) CTGTTTCCTGCTTCTG 1 chr5:168477347-168477847 ( 73) ATGTTTTCAGCTACTG 1 chr5:126885501-126886001 ( 45) TTGCTTTTAGCCTTCT 1 chr19:35605647-35606147 ( 20) CTGCTCTCAGCTTCTA 1 chr9:109474103-109474603 ( 20) TTACTTTTAGCCTCCT 1 chr8:37233927-37234427 ( 54) TTGCTTTTAGCCGCAG 1 chr13:35740440-35740940 ( 47) CTGCTTGTGGTTTCTA 1 chr11:66637292-66637792 ( 71) CTGCTTTTAGCCTGTT 1 chr4:80074547-80075047 ( 30) CTGCTTTTTGTCTCTG 1 chr17:41360219-41360719 ( 35) TTACTCTTGGCTTCTG 1 chr6:106829667-106830167 ( 48) CTGTTACTGGCTTCTG 1 chr5:144037403-144037903 ( 39) TTGCTTTTAGCCGCCT 1 chr15:66283803-66284303 ( 50) GTGCTTTTAGCTTCAC 1 chr11:60925417-60925917 ( 73) TTGCTTTCAGCCACCT 1 chr12:88434540-88435040 ( 53) TTGCTTTTAGCCGCCT 1 chr1:109769203-109769703 ( 22) GTGTTTTGGGCCTCTG 1 chr14:19775128-19775628 ( 28) TTGTTTGTGGCTCCTG 1 chr1:162976538-162977038 ( 34) TTGTTTTAAGCCTCTA 1 chr1:46387843-46388343 ( 13) TTGCTTTTAGCCACCC 1 chr5:90546996-90547496 ( 34) TTGCTTGCAGCCACTG 1 chr17:78872377-78872877 ( 52) ATGCTTTTAGCCTTTT 1 chr8:140821815-140822315 ( 37) CTGCTTGTAGCCACCT 1 chr9:136738025-136738525 ( 35) CTGTTCCAGGCTTCTG 1 chr18:13721287-13721787 ( 42) TTGCTTTTGGCTTACT 1 chr1:111586910-111587410 ( 51) TTGCTTGTAGCCACCT 1 chr1:234256611-234257111 ( 59) TTGCTCCCAGCTTCCT 1 chr10:86879511-86880011 ( 46) TTGCTTTTAGCCACAC 1 chr19:16106044-16106544 ( 70) ATGCTTATGGCCTCAG 1 chr6:17715081-17715581 ( 62) TTGATTTTAGCTTCAT 1 chr12:121748746-12174924 ( 61) CTGCTTACAGCCTCAT 1 chr12:29530407-29530907 ( 68) CTGCTTTTGCTTTCTG 1 chr1:21991522-21992022 ( 9) CTGTTTCTGATCTCTG 1 chr1:78620124-78620624 ( 9) CTGCTTTGAGTTTCAG 1 chr5:71946183-71946683 ( 45) AGGTTTCTGGCTTCTG 1 chr5:73103727-73104227 ( 56) AGGTTTCTGGCTTCTG 1 chr1:227628500-227629000 ( 38) TTACTTTTAGCCACCT 1 chr1:232866831-232867331 ( 30) TTGCTCATGGCCTCTA 1 chr17:81376054-81376554 ( 37) TTGCTTTAGGCCACCT 1 chr1:153505866-153506366 ( 61) GTGCCTTTGGCCTCCT 1 chr13:37138264-37138764 ( 24) TTGCTTTAAGCCACCT 1 chr5:72281969-72282469 ( 58) TTGCCTTTGGCCTCAA 1 chr17:73092613-73093113 ( 70) GTGTTTGTAGCTTCCC 1 chr12:26884898-26885398 ( 81) ATGCTTTTAGCCTATT 1 chr7:116786151-116786651 ( 40) TTGCTTTTGGACTCTC 1 chr15:84914912-84915412 ( 51) GTGTTTCTAGCCCCAG 1 chr6:154613305-154613805 ( 5) CTGCTTTTAGCCATAA 1 chr14:50961926-50962426 ( 55) ATGCTTATAGCCACCT 1 chr14:68088970-68089470 ( 39) TTGCTTTTGGTCCTTG 1 chr10:120850979-12085147 ( 48) TTGCCTTCAGTTTCCT 1 chr10:44932673-44933173 ( 51) GTGCTTTGGGCCACCT 1 chr19:7179877-7180377 ( 60) GTGTTTTAAGCCACTA 1 chr4:88456703-88457203 ( 54) TTGCCTTTGGCCGCCT 1 chr6:129771936-129772436 ( 48) TTGTCTCCAGCTCCTG 1 chr3:23957879-23958379 ( 36) CTGTTTGTAGCCATCT 1 chr8:24940262-24940762 ( 61) CTGCTTTTAGTCTGCA 1 chr19:1383513-1384013 ( 72) GCGCTTTCGGCCTCCG 1 chrX:73916943-73917443 ( 1) GTATTTATAGCCTCAG 1 chr7:128899399-128899899 ( 2) CTATTTACAGCTTTTG 1 chr5:170190689-170191189 ( 39) GTGTTTGTGGTCACCT 1 chr10:93208963-93209463 ( 40) CTGTTTATGACCTCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGYTTYTRGCYTCTG MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 50915 bayes= 8.50462 E= 3.1e-429 -212 98 -151 55 -1419 -551 -451 194 -241 -1419 197 -1419 -458 120 -1419 74 -1419 -319 -1419 193 -558 -205 -1419 187 -241 37 -205 117 -326 -42 -351 159 94 -1419 101 -400 -358 -551 200 -1419 -558 181 -451 -100 -1419 60 -1419 130 -94 -319 -293 166 -458 192 -451 -226 -126 -19 -1419 141 -126 -219 126 0 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGYTTYTRGCYTCTG MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 187 E= 3.1e-429 0.058824 0.481283 0.085561 0.374332 0.000000 0.005348 0.010695 0.983957 0.048128 0.000000 0.951872 0.000000 0.010695 0.561497 0.000000 0.427807 0.000000 0.026738 0.000000 0.973262 0.005348 0.058824 0.000000 0.935829 0.048128 0.315508 0.058824 0.577540 0.026738 0.181818 0.021390 0.770053 0.491979 0.000000 0.491979 0.016043 0.021390 0.005348 0.973262 0.000000 0.005348 0.855615 0.010695 0.128342 0.000000 0.368984 0.000000 0.631016 0.133690 0.026738 0.032086 0.807487 0.010695 0.925134 0.010695 0.053476 0.106952 0.213904 0.000000 0.679144 0.106952 0.053476 0.582888 0.256684 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGYTTYTRGCYTCTG MEME-2 regular expression -------------------------------------------------------------------------------- [CT]TG[CT]TT[TC]T[AG]GC[TC]TC[TC][GT] -------------------------------------------------------------------------------- Time 1033.28 secs. ******************************************************************************** ******************************************************************************** MOTIF KRRRACAGGAATTTATGCTGAR MEME-3 width = 22 sites = 88 llr = 1583 E-value = 8.3e-324 ******************************************************************************** -------------------------------------------------------------------------------- Motif KRRRACAGGAATTTATGCTGAR MEME-3 Description -------------------------------------------------------------------------------- Simplified A 1355919118a:::9:2:1195 pos.-specific C 1::::7:::::::::1:81::1 probability G 465411:982::11::8::814 matrix T 4::::1:::::999:9:18::: bits 2.0 1.8 * 1.6 * * 1.4 * * ***** * Relative 1.2 * ************ ** Entropy 1.0 * * *************** (26.0 bits) 0.8 **** *************** 0.6 ********************* 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel TGGAACAGGAATTTATGCTGAA consensus GAAG G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KRRRACAGGAATTTATGCTGAR MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr2:190301981-190302481 + 51 2.61e-13 ttctagtgag ggaaacaggaatttatgctgaa ctggctggct chr1:59266234-59266734 + 63 5.04e-13 gagaggcaac gggaacaggaatttatgctgag cagagtgacc chr6:106911216-106911716 + 79 5.04e-13 gaggagtaaa gggaacaggaatttatgctgag chr8:19537288-19537788 - 24 5.04e-13 GAGGGGTAAA GGGAACAGGAATTTATGCTGAG TGGGGTGGTC chr7:157889480-157889980 - 28 5.04e-13 GAGAGGCAAA GGGAACAGGAATTTATGCTGAG TGGGTGGCTA chr20:16418623-16419123 - 9 5.04e-13 GAGGGGGAAA GGGAACAGGAATTTATGCTGAG CTGGGTGG chr20:15774827-15775327 + 71 5.04e-13 gaggggcaaa gggaacaggaatttatgctgag ctagtgac chrX:11959030-11959530 + 78 1.52e-12 agtgggtaaa gagaacaggaatttatgctgag c chr10:25974795-25975295 + 55 1.79e-12 gagggaagga taagacaggaatttatgctgaa tgagttggct chr9:84303714-84304214 - 16 1.79e-12 GAGGGAAGAA TAAGACAGGAATTTATGCTGAA AGGATTGGCT chr19:29914883-29915383 + 36 3.76e-12 gaggagcaaa gggaataggaatttatgctgag cgggatggct chr13:97425862-97426362 - 9 4.58e-12 CAAGGGAGGA TGAGATAGGAATTTATGCTGAA TGGATTGG chr4:80074547-80075047 + 67 6.58e-12 gaggaaaggg tggaacaggaatttatgctaaa tgagttggcc chr4:184617464-184617964 + 67 8.13e-12 gaggggtaaa gggaacaggaatttatgttgag caggttggct chr18:13328196-13328696 - 10 1.25e-11 GTGGGAAGAA TAAGACAGGGATTTATGCTGAA TGGGGCTGC chr1:116732361-116732861 + 71 1.25e-11 gtgggaagac taagacagggatttatgctgaa gagggtgg chr9:136738025-136738525 + 73 1.25e-11 gagggacaga ggggacaggaatttacgctgaa ggagat chr12:29530407-29530907 - 26 2.09e-11 GGAGGAAGGG CAAGACAGGAATTTATGCTGAA CGGGTTGCCT chr1:150196425-150196925 - 5 2.41e-11 GAGGAGAGGG TGAGGCAGGAATTTATGCTGAA TGGA chr19:29295261-29295761 - 22 3.79e-11 GAGGGGCAAA GGGAACAGGAATTTGTGCTGAG TTGGATGGCT chr10:101163898-10116439 + 66 4.78e-11 atgggaagaa taagacaagaatttatgctgag tagggtggcc chr6:106829667-106830167 - 5 4.78e-11 GAGGGGTAAC AGGAATAGGAATTTATGCTGAG TGAG chr5:160501318-160501818 + 42 6.63e-11 gtggggcaaa tggaatagaaatttatgctgag cagagtggtc chr6:101860076-101860576 + 61 8.69e-11 gaggggcaaa aggaacaggaatttatgctaag caagatggct chr2:134764761-134765261 - 13 9.80e-11 GAGGGAAAGA TGAGACAAGGATTTATGCTGAA TAAGTTGGCC chr2:85721004-85721504 + 61 9.80e-11 ctgggaagac taagacagggatttatactgaa tgggatggcc chr9:32498171-32498671 - 7 1.11e-10 GTGGGGAGAG TAAAACAGAGATTTATGCTGAA TAGGGT chr5:73103727-73104227 - 12 1.26e-10 GAGAGGCAAA AGGAACAGGAATGTATGCTGAG TGGGGTGGCT chr22:39452117-39452617 + 68 1.43e-10 gaggggcaaa gggaacaggaatttatacagag cagggtggct chr3:9361822-9362322 - 28 1.65e-10 GTTGGAAGAA TAAGACAGGGATTTATGCTAAA CACAGTGGCC chr10:70575612-70576112 + 64 1.88e-10 gtggggagaa taagacagggatttacgctgaa tagggtgtcc chr2:16254507-16255007 - 6 1.88e-10 GTAGGAAGAA TAAAAAAGGGATTTATGCTGAG TACAG chr6:37665716-37666216 - 17 2.13e-10 GGAGGAAAGG TGAGACAGGAATTTCTGCTGAA CAGGTGGGCC chr2:47676504-47677004 - 5 2.13e-10 GAGGGGTAAA GGGAGCAGAAATTTATGCTGAG CAGG chr7:98066071-98066571 + 71 2.40e-10 gaggaaagaa ggagacaggaatttatacggaa ctataaat chr1:226450676-226451176 - 10 2.40e-10 GAGGGGCAGA GGGGTCAGGAATTTATGCTGAG CAGGGTGGC chr9:108777108-108777608 - 37 2.40e-10 GGAGGAAGGC TAAGACAGGAATTTACACTGAA CAGGTTGGCT chr17:41360219-41360719 + 72 3.39e-10 gagggaaatg tgagaaaggaatgtatgctgag tgaggtg chr1:234256611-234257111 - 16 3.39e-10 GTCAGAAGAA TAAGACAGGGATTTATGCTGGA TGGGGTGGCC chr2:113809360-113809860 - 8 5.27e-10 GAGTGGCAAA AGGAACATGAATTTATGCTGAG CAGGGTG chr22:44500502-44501002 - 17 5.85e-10 GTTGGAAGAG TAAGACAGGAATTTATGTTGAT CAGGGTGGCC chr1:90926180-90926680 - 15 8.02e-10 GGAGGAAGGG TGAGACAGGAAGTTATGTTGAA TGGGTTGGCT chr11:57735355-57735855 + 67 9.99e-10 gaggggtaaa ggaaacaggagtttatgctaag cagggtggcc chr13:110986520-11098702 - 23 9.99e-10 GAGGGAAGGA TAAGACAGGAACTTATGTTGAA CAGATTGGCT chr14:90550255-90550755 - 14 1.11e-09 GAGGGGAGGG TGGAACAGGGATTTATGTGGAA CTGGTTGGCC chr2:218707708-218708208 + 75 1.52e-09 gagggataaa gggaacaggaatttacacagag tggg chr10:95812955-95813455 + 68 1.52e-09 gaggggcaaa gggaacaggaatttacacagag ctggtggcca chr7:80734324-80734824 + 70 1.52e-09 gaggggcaga gggaacaggaatttataccaag tagCTAATT chr9:83336971-83337471 - 13 1.69e-09 GTGGGAAGAA TAAGACAAAGATTTATGCTGAA TGGGGTGGCC chr6:2543072-2543572 - 11 1.87e-09 GTGGGAAGAA TGTAAAAGGGATTTATGCTGAA CCAGGTGACC chr15:26724585-26725085 - 24 2.30e-09 GGGGGGCAAA GGGAACAAGAATTTATGCAGAC TGGGGTGGCT chr14:31241471-31241971 + 70 2.55e-09 gaggggcaga gggaacagaaatttatacttag cagggtggc chr3:184952280-184952780 + 75 2.82e-09 gaggggtaaa gggaatagtaatttacgctgag taga chr19:29728138-29728638 - 21 3.77e-09 TGGGAGGGGA TAAGACAGGAATTCAAGCTGAA TGGGTTGGCC chr17:59039006-59039506 - 47 3.77e-09 GAGGGAAGGG TAACATAGGAATTGATGCTGAA TAAGTTGGCC chr3:86388747-86389247 - 17 3.77e-09 GAGCAGCAAA AGGAACAGGAATTTATATTGAC CATGGTGGCC chr21:42620144-42620644 + 68 4.58e-09 gaggagcaaa gggaagaggaatttatgctggt ggcgtggcta chr19:28955958-28956458 + 21 5.52e-09 gaggtgtgga gggaacaggaatttaggctcaa caggctggct chr18:62310801-62311301 - 3 8.07e-09 GAGGGGTAAA GGGAACAGGAATTGATATTGAC TG chrX:1511188-1511688 - 2 9.71e-09 AAGAAAAGAC AGAGATGGGAATTTATGTTGAA T chr6:153483174-153483674 - 13 1.07e-08 GTAGGAAGAA CAAGACAAGAATTTATGCTCAA TGGGGTGGCC chr17:81980420-81980920 + 64 1.28e-08 gagggaagaa taagacagggatttacaccgaa tggggtggct chr6:129771936-129772436 - 6 1.28e-08 GAGGGGCAAA GGGAAAAGGAGTTTATGCTGGG TGGGG chr14:77091203-77091703 + 66 1.28e-08 gaaggctaaa gcaaacagaaatttatgcttag ctgcatggcc chr2:1578489-1578989 - 16 1.53e-08 GTGGAAAGAA TAAGACAGAAATTTATTCAGAA TGGGACAGCC chr1:231066759-231067259 + 72 2.18e-08 gaagggcaaa gggaacaggaatctaagctggg cagggtg chr6:160053901-160054401 + 69 2.18e-08 ggaggaagac taagacacgaatggatgctgaa caggttagtc chr14:39486443-39486943 + 37 2.18e-08 gggaggggca aagagcaggaatttttgctgag caggatggcc chr9:69085576-69086076 + 61 2.60e-08 gtcagaagaa taagatgggcatttatgctgaa taggatggcc chr13:36610500-36611000 + 71 2.60e-08 gaggggcaaa tggaatgggaatttaagttgag tgaggtgg chr1:34637039-34637539 + 40 3.65e-08 gaggtaaggg tggaagagtaatttatgcaaaa tgggttggat chr5:168477347-168477847 - 30 3.97e-08 GAAGGGCAGA GGAAAAAAGAATGTGTGCTGAG CAGGTGGCCA chr2:69646919-69647419 - 25 4.32e-08 GAGGAAAAAG TGGAACACAAATTTATGCCAAA TGAGTTGGCT chr14:103269850-10327035 - 36 6.03e-08 GTAGGAATGG TAACACAGGGATTTATATTGAC CAGGGTGGCC chr4:6526013-6526513 - 53 1.06e-07 CAGGCATTTC CAGGAAGGGAATTTATGATGAA CGGGTTAGCT chr16:74283713-74284213 - 28 1.24e-07 GGGAGGGAAG GGTGGAATGAATTTATGCTGAA TTGGTTGGTT chr9:135680816-135681316 + 61 1.24e-07 tggaagagaa gggaagaagaatttacactgca tggggAGCAG chr5:10304230-10304730 - 20 2.47e-07 GTGGGAAGAA TAGTACAGGGATCTGTGCTGAA CAGTGTGGCC chr3:39022117-39022617 - 6 2.66e-07 GAGGGGCAAA GGGAGCAGAAATTTATGTGTAG CACAG chr13:35740440-35740940 - 7 2.87e-07 GAGGAAAGGC TGAGATCACAATTTATGCTGAA TGGGCC chr7:132255816-132256316 + 7 4.77e-07 TGGGTC TGGGATAGGAAATCATGCTGGC TCCTAGCCAA chr8:74099487-74099987 - 23 7.29e-07 GAGGGGAAAA GGGAACAGAAACGTATGGTAAG TTGAGTGGTT chr12:6092747-6093247 - 5 1.34e-06 GAGAAAGGGG TGGAATAGAAACTTATTCCAAA AGGG chr12:80186624-80187124 + 45 1.44e-06 GTCCAAAGCA CCACATAGGAAATGATGCTGAA TGACTCATCT chr19:41501302-41501802 + 31 1.99e-06 ggagaacaaa gaaaagagggatggatgatgat tcaccctgta chr1:232866831-232867331 + 66 2.42e-06 ggcggaaagg cgagacaggaAGGTAtgccaca gagagttcat chr9:109474103-109474603 - 59 2.58e-06 AAATGAACAT CGAGAGAGTAAATGATGCGGAA CTCCTTTGCC chr6:16947496-16947996 - 12 3.11e-06 TCAGGAAATA GAGGGGAGGAATTTGAACTGCA TGGAAGTGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KRRRACAGGAATTTATGCTGAR MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr2:190301981-190302481 2.6e-13 50_[+3]_28 chr1:59266234-59266734 5e-13 62_[+3]_16 chr6:106911216-106911716 5e-13 78_[+3] chr8:19537288-19537788 5e-13 23_[-3]_55 chr7:157889480-157889980 5e-13 27_[-3]_51 chr20:16418623-16419123 5e-13 8_[-3]_70 chr20:15774827-15775327 5e-13 70_[+3]_8 chrX:11959030-11959530 1.5e-12 77_[+3]_1 chr10:25974795-25975295 1.8e-12 54_[+3]_24 chr9:84303714-84304214 1.8e-12 15_[-3]_63 chr19:29914883-29915383 3.8e-12 35_[+3]_43 chr13:97425862-97426362 4.6e-12 8_[-3]_70 chr4:80074547-80075047 6.6e-12 66_[+3]_12 chr4:184617464-184617964 8.1e-12 66_[+3]_12 chr18:13328196-13328696 1.3e-11 9_[-3]_69 chr1:116732361-116732861 1.3e-11 70_[+3]_8 chr9:136738025-136738525 1.3e-11 72_[+3]_6 chr12:29530407-29530907 2.1e-11 25_[-3]_53 chr1:150196425-150196925 2.4e-11 4_[-3]_74 chr19:29295261-29295761 3.8e-11 21_[-3]_57 chr10:101163898-10116439 4.8e-11 65_[+3]_13 chr6:106829667-106830167 4.8e-11 4_[-3]_74 chr5:160501318-160501818 6.6e-11 41_[+3]_37 chr6:101860076-101860576 8.7e-11 60_[+3]_18 chr2:134764761-134765261 9.8e-11 12_[-3]_66 chr2:85721004-85721504 9.8e-11 60_[+3]_18 chr9:32498171-32498671 1.1e-10 6_[-3]_72 chr5:73103727-73104227 1.3e-10 11_[-3]_67 chr22:39452117-39452617 1.4e-10 67_[+3]_11 chr3:9361822-9362322 1.6e-10 27_[-3]_51 chr10:70575612-70576112 1.9e-10 63_[+3]_15 chr2:16254507-16255007 1.9e-10 5_[-3]_73 chr6:37665716-37666216 2.1e-10 16_[-3]_62 chr2:47676504-47677004 2.1e-10 4_[-3]_74 chr7:98066071-98066571 2.4e-10 70_[+3]_8 chr1:226450676-226451176 2.4e-10 9_[-3]_69 chr9:108777108-108777608 2.4e-10 36_[-3]_42 chr17:41360219-41360719 3.4e-10 71_[+3]_7 chr1:234256611-234257111 3.4e-10 15_[-3]_63 chr2:113809360-113809860 5.3e-10 7_[-3]_71 chr22:44500502-44501002 5.9e-10 16_[-3]_62 chr1:90926180-90926680 8e-10 14_[-3]_64 chr11:57735355-57735855 1e-09 66_[+3]_12 chr13:110986520-11098702 1e-09 22_[-3]_56 chr14:90550255-90550755 1.1e-09 13_[-3]_65 chr2:218707708-218708208 1.5e-09 74_[+3]_4 chr10:95812955-95813455 1.5e-09 67_[+3]_11 chr7:80734324-80734824 1.5e-09 69_[+3]_9 chr9:83336971-83337471 1.7e-09 12_[-3]_66 chr6:2543072-2543572 1.9e-09 10_[-3]_68 chr15:26724585-26725085 2.3e-09 23_[-3]_55 chr14:31241471-31241971 2.6e-09 69_[+3]_9 chr3:184952280-184952780 2.8e-09 74_[+3]_4 chr19:29728138-29728638 3.8e-09 20_[-3]_58 chr17:59039006-59039506 3.8e-09 46_[-3]_32 chr3:86388747-86389247 3.8e-09 16_[-3]_62 chr21:42620144-42620644 4.6e-09 67_[+3]_11 chr19:28955958-28956458 5.5e-09 20_[+3]_58 chr18:62310801-62311301 8.1e-09 2_[-3]_76 chrX:1511188-1511688 9.7e-09 1_[-3]_77 chr6:153483174-153483674 1.1e-08 12_[-3]_66 chr17:81980420-81980920 1.3e-08 63_[+3]_15 chr6:129771936-129772436 1.3e-08 5_[-3]_73 chr14:77091203-77091703 1.3e-08 65_[+3]_13 chr2:1578489-1578989 1.5e-08 15_[-3]_63 chr1:231066759-231067259 2.2e-08 71_[+3]_7 chr6:160053901-160054401 2.2e-08 68_[+3]_10 chr14:39486443-39486943 2.2e-08 36_[+3]_42 chr9:69085576-69086076 2.6e-08 60_[+3]_18 chr13:36610500-36611000 2.6e-08 70_[+3]_8 chr1:34637039-34637539 3.7e-08 39_[+3]_39 chr5:168477347-168477847 4e-08 29_[-3]_49 chr2:69646919-69647419 4.3e-08 24_[-3]_54 chr14:103269850-10327035 6e-08 35_[-3]_43 chr4:6526013-6526513 1.1e-07 52_[-3]_26 chr16:74283713-74284213 1.2e-07 27_[-3]_51 chr9:135680816-135681316 1.2e-07 60_[+3]_18 chr5:10304230-10304730 2.5e-07 19_[-3]_59 chr3:39022117-39022617 2.7e-07 5_[-3]_73 chr13:35740440-35740940 2.9e-07 6_[-3]_72 chr7:132255816-132256316 4.8e-07 6_[+3]_72 chr8:74099487-74099987 7.3e-07 22_[-3]_56 chr12:6092747-6093247 1.3e-06 4_[-3]_74 chr12:80186624-80187124 1.4e-06 44_[+3]_34 chr19:41501302-41501802 2e-06 30_[+3]_48 chr1:232866831-232867331 2.4e-06 65_[+3]_13 chr9:109474103-109474603 2.6e-06 58_[-3]_20 chr6:16947496-16947996 3.1e-06 11_[-3]_67 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KRRRACAGGAATTTATGCTGAR MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KRRRACAGGAATTTATGCTGAR width=22 seqs=88 chr2:190301981-190302481 ( 51) GGAAACAGGAATTTATGCTGAA 1 chr1:59266234-59266734 ( 63) GGGAACAGGAATTTATGCTGAG 1 chr6:106911216-106911716 ( 79) GGGAACAGGAATTTATGCTGAG 1 chr8:19537288-19537788 ( 24) GGGAACAGGAATTTATGCTGAG 1 chr7:157889480-157889980 ( 28) GGGAACAGGAATTTATGCTGAG 1 chr20:16418623-16419123 ( 9) GGGAACAGGAATTTATGCTGAG 1 chr20:15774827-15775327 ( 71) GGGAACAGGAATTTATGCTGAG 1 chrX:11959030-11959530 ( 78) GAGAACAGGAATTTATGCTGAG 1 chr10:25974795-25975295 ( 55) TAAGACAGGAATTTATGCTGAA 1 chr9:84303714-84304214 ( 16) TAAGACAGGAATTTATGCTGAA 1 chr19:29914883-29915383 ( 36) GGGAATAGGAATTTATGCTGAG 1 chr13:97425862-97426362 ( 9) TGAGATAGGAATTTATGCTGAA 1 chr4:80074547-80075047 ( 67) TGGAACAGGAATTTATGCTAAA 1 chr4:184617464-184617964 ( 67) GGGAACAGGAATTTATGTTGAG 1 chr18:13328196-13328696 ( 10) TAAGACAGGGATTTATGCTGAA 1 chr1:116732361-116732861 ( 71) TAAGACAGGGATTTATGCTGAA 1 chr9:136738025-136738525 ( 73) GGGGACAGGAATTTACGCTGAA 1 chr12:29530407-29530907 ( 26) CAAGACAGGAATTTATGCTGAA 1 chr1:150196425-150196925 ( 5) TGAGGCAGGAATTTATGCTGAA 1 chr19:29295261-29295761 ( 22) GGGAACAGGAATTTGTGCTGAG 1 chr10:101163898-10116439 ( 66) TAAGACAAGAATTTATGCTGAG 1 chr6:106829667-106830167 ( 5) AGGAATAGGAATTTATGCTGAG 1 chr5:160501318-160501818 ( 42) TGGAATAGAAATTTATGCTGAG 1 chr6:101860076-101860576 ( 61) AGGAACAGGAATTTATGCTAAG 1 chr2:134764761-134765261 ( 13) TGAGACAAGGATTTATGCTGAA 1 chr2:85721004-85721504 ( 61) TAAGACAGGGATTTATACTGAA 1 chr9:32498171-32498671 ( 7) TAAAACAGAGATTTATGCTGAA 1 chr5:73103727-73104227 ( 12) AGGAACAGGAATGTATGCTGAG 1 chr22:39452117-39452617 ( 68) GGGAACAGGAATTTATACAGAG 1 chr3:9361822-9362322 ( 28) TAAGACAGGGATTTATGCTAAA 1 chr10:70575612-70576112 ( 64) TAAGACAGGGATTTACGCTGAA 1 chr2:16254507-16255007 ( 6) TAAAAAAGGGATTTATGCTGAG 1 chr6:37665716-37666216 ( 17) TGAGACAGGAATTTCTGCTGAA 1 chr2:47676504-47677004 ( 5) GGGAGCAGAAATTTATGCTGAG 1 chr7:98066071-98066571 ( 71) GGAGACAGGAATTTATACGGAA 1 chr1:226450676-226451176 ( 10) GGGGTCAGGAATTTATGCTGAG 1 chr9:108777108-108777608 ( 37) TAAGACAGGAATTTACACTGAA 1 chr17:41360219-41360719 ( 72) TGAGAAAGGAATGTATGCTGAG 1 chr1:234256611-234257111 ( 16) TAAGACAGGGATTTATGCTGGA 1 chr2:113809360-113809860 ( 8) AGGAACATGAATTTATGCTGAG 1 chr22:44500502-44501002 ( 17) TAAGACAGGAATTTATGTTGAT 1 chr1:90926180-90926680 ( 15) TGAGACAGGAAGTTATGTTGAA 1 chr11:57735355-57735855 ( 67) GGAAACAGGAGTTTATGCTAAG 1 chr13:110986520-11098702 ( 23) TAAGACAGGAACTTATGTTGAA 1 chr14:90550255-90550755 ( 14) TGGAACAGGGATTTATGTGGAA 1 chr2:218707708-218708208 ( 75) GGGAACAGGAATTTACACAGAG 1 chr10:95812955-95813455 ( 68) GGGAACAGGAATTTACACAGAG 1 chr7:80734324-80734824 ( 70) GGGAACAGGAATTTATACCAAG 1 chr9:83336971-83337471 ( 13) TAAGACAAAGATTTATGCTGAA 1 chr6:2543072-2543572 ( 11) TGTAAAAGGGATTTATGCTGAA 1 chr15:26724585-26725085 ( 24) GGGAACAAGAATTTATGCAGAC 1 chr14:31241471-31241971 ( 70) GGGAACAGAAATTTATACTTAG 1 chr3:184952280-184952780 ( 75) GGGAATAGTAATTTACGCTGAG 1 chr19:29728138-29728638 ( 21) TAAGACAGGAATTCAAGCTGAA 1 chr17:59039006-59039506 ( 47) TAACATAGGAATTGATGCTGAA 1 chr3:86388747-86389247 ( 17) AGGAACAGGAATTTATATTGAC 1 chr21:42620144-42620644 ( 68) GGGAAGAGGAATTTATGCTGGT 1 chr19:28955958-28956458 ( 21) GGGAACAGGAATTTAGGCTCAA 1 chr18:62310801-62311301 ( 3) GGGAACAGGAATTGATATTGAC 1 chrX:1511188-1511688 ( 2) AGAGATGGGAATTTATGTTGAA 1 chr6:153483174-153483674 ( 13) CAAGACAAGAATTTATGCTCAA 1 chr17:81980420-81980920 ( 64) TAAGACAGGGATTTACACCGAA 1 chr6:129771936-129772436 ( 6) GGGAAAAGGAGTTTATGCTGGG 1 chr14:77091203-77091703 ( 66) GCAAACAGAAATTTATGCTTAG 1 chr2:1578489-1578989 ( 16) TAAGACAGAAATTTATTCAGAA 1 chr1:231066759-231067259 ( 72) GGGAACAGGAATCTAAGCTGGG 1 chr6:160053901-160054401 ( 69) TAAGACACGAATGGATGCTGAA 1 chr14:39486443-39486943 ( 37) AAGAGCAGGAATTTTTGCTGAG 1 chr9:69085576-69086076 ( 61) TAAGATGGGCATTTATGCTGAA 1 chr13:36610500-36611000 ( 71) TGGAATGGGAATTTAAGTTGAG 1 chr1:34637039-34637539 ( 40) TGGAAGAGTAATTTATGCAAAA 1 chr5:168477347-168477847 ( 30) GGAAAAAAGAATGTGTGCTGAG 1 chr2:69646919-69647419 ( 25) TGGAACACAAATTTATGCCAAA 1 chr14:103269850-10327035 ( 36) TAACACAGGGATTTATATTGAC 1 chr4:6526013-6526513 ( 53) CAGGAAGGGAATTTATGATGAA 1 chr16:74283713-74284213 ( 28) GGTGGAATGAATTTATGCTGAA 1 chr9:135680816-135681316 ( 61) GGGAAGAAGAATTTACACTGCA 1 chr5:10304230-10304730 ( 20) TAGTACAGGGATCTGTGCTGAA 1 chr3:39022117-39022617 ( 6) GGGAGCAGAAATTTATGTGTAG 1 chr13:35740440-35740940 ( 7) TGAGATCACAATTTATGCTGAA 1 chr7:132255816-132256316 ( 7) TGGGATAGGAAATCATGCTGGC 1 chr8:74099487-74099987 ( 23) GGGAACAGAAACGTATGGTAAG 1 chr12:6092747-6093247 ( 5) TGGAATAGAAACTTATTCCAAA 1 chr12:80186624-80187124 ( 45) CCACATAGGAAATGATGCTGAA 1 chr19:41501302-41501802 ( 31) GAAAAGAGGGATGGATGATGAT 1 chr1:232866831-232867331 ( 66) CGAGACAGGAAGGTATGCCACA 1 chr9:109474103-109474603 ( 59) CGAGAGAGTAAATGATGCGGAA 1 chr6:16947496-16947996 ( 12) GAGGGGAGGAATTTGAACTGCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KRRRACAGGAATTTATGCTGAR MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 9.42376 E= 8.3e-324 -169 -184 75 79 41 -342 138 -1310 86 -1310 107 -349 106 -284 79 -449 184 -1310 -184 -449 -169 153 -184 -79 188 -442 -242 -1310 -149 -342 182 -349 -104 -442 177 -291 165 -442 -42 -1310 193 -1310 -342 -1310 -291 -284 -342 183 -1310 -342 -162 181 -1310 -342 -184 183 186 -442 -242 -449 -249 -142 -442 173 -69 -1310 175 -349 -349 179 -442 -104 -191 -210 -242 169 -117 -342 177 -291 183 -284 -210 -1310 100 -210 71 -291 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KRRRACAGGAATTTATGCTGAR MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 88 E= 8.3e-324 0.079545 0.068182 0.409091 0.443182 0.340909 0.022727 0.636364 0.000000 0.465909 0.000000 0.511364 0.022727 0.534091 0.034091 0.420455 0.011364 0.920455 0.000000 0.068182 0.011364 0.079545 0.704545 0.068182 0.147727 0.943182 0.011364 0.045455 0.000000 0.090909 0.022727 0.863636 0.022727 0.125000 0.011364 0.829545 0.034091 0.806818 0.011364 0.181818 0.000000 0.977273 0.000000 0.022727 0.000000 0.034091 0.034091 0.022727 0.909091 0.000000 0.022727 0.079545 0.897727 0.000000 0.022727 0.068182 0.909091 0.931818 0.011364 0.045455 0.011364 0.045455 0.090909 0.011364 0.852273 0.159091 0.000000 0.818182 0.022727 0.022727 0.840909 0.011364 0.125000 0.068182 0.056818 0.045455 0.829545 0.113636 0.022727 0.829545 0.034091 0.909091 0.034091 0.056818 0.000000 0.511364 0.056818 0.397727 0.034091 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KRRRACAGGAATTTATGCTGAR MEME-3 regular expression -------------------------------------------------------------------------------- [TG][GA][GA][AG]ACAGGAATTTATGCTGA[AG] -------------------------------------------------------------------------------- Time 1470.57 secs. ******************************************************************************** ******************************************************************************** MOTIF YTGGCACNKTGCCARGWNYB MEME-4 width = 20 sites = 118 llr = 1648 E-value = 1.0e-269 ******************************************************************************** -------------------------------------------------------------------------------- Motif YTGGCACNKTGCCARGWNYB MEME-4 Description -------------------------------------------------------------------------------- Simplified A :::::71222:::a424321 pos.-specific C 3:::a1632::aa::22333 probability G :1aa:12241a:::561223 matrix T 79:::11326::::::4242 bits 2.0 ** *** 1.8 *** **** 1.6 **** **** 1.4 **** **** Relative 1.2 **** **** Entropy 1.0 ***** **** (20.1 bits) 0.8 ***** ***** 0.6 ****** ****** 0.4 ******* ******* 0.2 ******* ********* 0.0 -------------------- Multilevel TTGGCACCGTGCCAGGTATG consensus C GTTA A ACCC sequence A T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGGCACNKTGCCARGWNYB MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------------- chr1:27116202-27116702 - 23 1.14e-10 TTCAGGGTGC TTGGCACTGTGCCAGGATTC TGGGCCTGGA chr12:120646972-12064747 - 48 4.46e-10 TGCAAAGGGC TTGGCACTGTGCCAAGCATC TAGAAAGCGC chr1:45875942-45876442 + 34 5.96e-10 atacattaca ttggcagtgtgccaagaatg gtttaaatgg chr12:120091285-12009178 - 50 7.87e-10 CCCCTCAGAG CTGGCACTGTGCCAGGTATT TGCCAACACA chr5:41747192-41747692 + 42 1.03e-09 tgagtatggg ttggcactgtgccaagtgtt agataaacaa chr6:31777119-31777619 - 48 1.34e-09 GGGTCTGTCC CTGGCACTGTGCCAGGCCTG AGTCACGCTG chr18:45755950-45756450 + 39 1.34e-09 CAGAGAAAAG TTGGCACAGTGCCAGGAAAC CTGGCTAAAA chr1:234977857-234978357 + 31 1.73e-09 TGGCAGAAGC TTGGCACTGTGCCAGGCAGG AGAGAGAAAA chr1:52502760-52503260 - 29 1.73e-09 TGTAAAGCAC TTGGCACGGTGCCAGGTCCA TAGTGGGTAC chr19:48539581-48540081 + 31 2.19e-09 tgcagatctc ttggcactgtgccaggcact gagtatgttc chr14:95291769-95292269 - 25 2.19e-09 ACGTCAACCC TTGGCACAGTGCCAGGAACA CAGTCAGTTC chr5:177404094-177404594 + 32 2.19e-09 GGGTTGGGGT CTGGCACTGTGCCAGGTCGC AGTACTCCCA chr1:181127024-181127524 - 51 3.45e-09 TCTAGGCTGC TTGGCACAGTGCCAGGTGCT CCATAGGTGC chr22:46053564-46054064 + 31 3.45e-09 CCCAGGCAGC CTGGCACCGTGCCAGGCTCG CCGCCGAGCT chr2:165825018-165825518 - 30 4.28e-09 AACCTTGAGT TTGGCACTGTGCCAAGCCAC AATCAAGCAT chr12:65624495-65624995 + 32 4.28e-09 TTTTCACTTT TTGGCACTTTGCCAAGTTTT AGTTCTGGGG chr7:128523196-128523696 + 49 5.27e-09 tccccagtga ctggcagcatgccaggAATG GGGGAGGTGA chr12:121404665-12140516 - 52 6.46e-09 AGCTCTCTTT CTGGCACAGTGCCAGGATTT TCAAATGGCC chr15:58755918-58756418 - 18 6.46e-09 TGGCTATATT TTGGCACTGTGCCAAGGTTG AGCTGGTTCC chr10:88092912-88093412 + 58 7.86e-09 GCATGATTAT CTGGCACTGTGCcagcagtg ctgtgcgagc chr1:47469295-47469795 + 60 7.86e-09 TAGTCTGTTT CTGGCACTTTGCCAGGTACT AGGTCATTTC chr7:104884059-104884559 + 55 7.86e-09 GGCCTTTGTT TTGGCAGCTTGCCAAGCATG TCCTCCTGAG chr12:57245180-57245680 - 54 9.50e-09 GGAGGCGGAG CTGGCACTGAGCCAAGATTG CGCCACTGCA chr22:29821297-29821797 + 75 1.14e-08 tgtggagtgc ttggcagaatgccaggtccc cggaac chr14:69716061-69716561 + 32 1.37e-08 CAAAAGATAG CTGGCAGCATGCCAGGATTC ATGTTGATGC chr16:22279960-22280460 - 25 1.37e-08 CTAGCCAGTC TTGGCACCTTGCCAGGAGAT ACAGAGGGAA chr12:56150496-56150996 - 53 1.63e-08 TTTCCCATTT TTGGCATTTTGCCAAGTATG AGTGGTTATG chr13:98507154-98507654 - 28 1.63e-08 GTGTGAAGCG TTGGCCCTGTGCCAGGAGCC CGCAGGCCTG chr3:99868298-99868798 + 20 1.63e-08 TGCTATAGGT TTGGCACTGTGCCAACTGCT TCATCACGTT chr1:80054137-80054637 - 54 1.93e-08 ACAGATAATA TTGGCTCCGAGCCAAGAATG AGCTCATGTG chr17:21040145-21040645 - 75 1.93e-08 TGCCAG TTGGCAGTGTGCCAGCAAGG AGCCCTTAAG chr1:184029092-184029592 + 45 2.67e-08 aggtcactcg ctggcagcttgccaagcctg ctggttcccc chr19:7699315-7699815 - 41 2.67e-08 ACTGACTTTC CTGGCACAGAGCCAGGAAGG AGTGGCAAAT chr5:109468676-109469176 - 32 3.12e-08 CATGACAACG TTGGCTCCCTGCCAAGAACC ACAGTGTCAC chr3:188348596-188349096 - 27 4.22e-08 CCCAAGAATG CTGGCAGCATGCCAGGCATT GTCAGCACAC chr2:178484602-178485102 + 51 4.88e-08 GTCGTCAGCT TTGGCATGGAGCCAAGTCTG TGATAGATGT chr5:10288439-10288939 - 45 4.88e-08 CTAAGAGGGC TTGGCCCGGTGCCAGGTGGC TGCTTTGCTG chr1:234523521-234524021 + 51 5.62e-08 TTTTTACAGG CTGGCAGGCTGCCAGGTTCC CTCGCCTGAC chr2:63064155-63064655 + 40 5.62e-08 gtcttaggcc ttggcacagtgccagacaca aggtaggact chr4:82796909-82797409 + 49 5.62e-08 GCATTTGCAG CTGGCACCATGCCAAAAAAG CCCTGTAGAA chrX:13647534-13648034 + 57 5.62e-08 ATAGGCCCTC CTGGCAGCATGCCAGGTCAT ATCATGAAAG chr6:80132914-80133414 + 54 6.45e-08 AACATCCCTG TTGGCATTGTGCCAGCACTT GAACTGCTGC chr17:2264023-2264523 - 43 6.45e-08 AAGTCCTCCT TTGGCTCCTTGCCAAGTTAG ACAAGGGAGC chr16:1271746-1272246 + 25 7.37e-08 GTCTGCATGG TTGGCACCCTGCCAGCTGGT CTCTGGGCCT chr1:230145444-230145944 - 7 7.37e-08 AAGGCCCCCA TTGGCACTATGCCAAGGTGG GTGGCT chr5:10601229-10601729 - 22 8.40e-08 CTGGGAGGAG TTGGCACCCAGCCAGGTTGA GCCTCGTTAG chr1:112700752-112701252 + 16 8.40e-08 ACCCGCCTCC TTGGCCCAGAGCCAGGCATG ACCTCATCCT chr8:17495787-17496287 - 50 8.40e-08 AGTAATAACT TTGGCAAAGTGCCAGATTTG TATTGCTGCC chr12:31636601-31637101 - 67 8.40e-08 AAAGGCATGG CTGGCACAAAGCCAGGAAGC ACGCCTGGCC chr1:110176218-110176718 + 41 9.55e-08 TGCTTCTGCC TTGGCTCCATGCCAGATGTG TGGCAGTTTT chr10:87586160-87586660 + 56 1.08e-07 cctaggtaat ttggcagcctgccaaatCCT ACTTATTATC chr6:118660193-118660693 + 33 1.08e-07 GCTGGGGGAG TTGGCAGATTGCCAGATAAG GGGCCATACT chr16:75054151-75054651 + 36 1.08e-07 CTTTGCCTCC CTGGCACCCTGCCAGTTCTG TCTGCTTTGT chr16:29943416-29943916 - 33 1.22e-07 AATAATAAAC TTGGCAGCTGGCCAAGTTAG GTCAGAGCCA chr5:37717532-37718032 + 15 1.22e-07 ATTGTTTGGT TTGGCAGGTAGCCAGCTCTC TGCTATAAGA chr17:40314515-40315015 - 32 1.22e-07 AGAGCTGAGC CTGGCACCTTGCCAGCCCCA GGACAGAAGT chr1:78620124-78620624 - 67 1.22e-07 AAAAACTCAG CTGGCAGCATGCCAACTGCC ACTAACTTTC chr1:221284029-221284529 - 45 1.22e-07 GACTTATTCC TTGGCATTTTGCCAACTACC CACAACAAAG chr1:235067813-235068313 - 6 1.38e-07 GTCATGACTT TTGGCTCCCAGCCAGGTGCG GTGGC chr5:170755607-170756107 + 55 1.38e-07 GTTTGGCCAA TTGGCATCTTGCCAAGAAAA GCCTGGCAGT chr10:21724676-21725176 - 62 1.55e-07 CACTGTCTTT TTGGCAGCAAGCCAGCTCTA CTAACTGAAG chr17:38881482-38881982 + 35 1.55e-07 GTGGTTTCTT CTGGCACTTTGCCAGGGAGT TGGGCCCACC chr18:73987173-73987673 - 62 1.55e-07 CAAAGTTATC TTGGCCCACAGCCAAGAATG AGCCAGGCAG chr18:70464633-70465133 - 53 1.94e-07 GCCTACTGTC TTGGCGCGATGCCAGCAACG GAATTTAATA chr10:18607459-18607959 + 69 1.94e-07 atctggagCA TTGGCATGGGGCCaagaata caggcttgaa chr5:77168820-77169320 + 52 1.94e-07 ACCCTGAGAG TTGGCGCAGTGCCAGCTCCT GTCACTTGAA chr12:29350031-29350531 - 30 1.94e-07 TATTTACTAT CTGGCTCTTTGCCAAAAATG TTTGCCAACC chr20:50366563-50367063 - 54 1.94e-07 AAACAGCCAT CTGGCACAGAGCCAGGGCAG TTCCATCAGC chr15:89383557-89384057 - 27 2.16e-07 CAAGAAGACG CTGGCTCTGAGCCAAGACGC ATCCCAGAAG chr13:112849470-11284997 - 34 2.40e-07 CACTGAATCC CTGGCACACAGCCAAAACTC AACAACGTTT chr18:48901898-48902398 + 47 2.40e-07 CCTGTTTGCC TTGGCCCCGGGCCAGGGCCG CCCCGCCAGT chr17:73474231-73474731 + 52 2.40e-07 TGACTCACAA CTGGCCACGTGCCAAGTTCG CTCTGGCTCT chr13:67224137-67224637 + 56 2.40e-07 TACTGCGGGA TTGGCACCTGGCCAGCACAA GCGACATGAT chr17:46742768-46743268 - 8 2.40e-07 GAGGAGGAAA TTGGCTCAGAGCCAAGAGTA AGAAGCT chr8:60619587-60620087 + 33 2.66e-07 TGCTATTTAT TTGGCCTAATGCCAAGTCTG ACTCCTTGAC chr7:20514317-20514817 - 58 2.66e-07 AGCTCTCCAG CTGGCTCATTGCCAACTCTC TGCCACTTAG chr14:69008233-69008733 + 42 2.66e-07 CAGAAGgttt ttggcaacatgccagattgc actgtttcag chr1:153880941-153881441 + 47 2.95e-07 TTTGCAGCCC CTGGCATGATGCCAACACTC AGTCAGCTGG chr2:232473335-232473835 - 36 2.95e-07 TGAAAGGAGT TTGGCCAAGTGCCAAGTGCC AGAACTTCTA chr1:43836434-43836934 + 53 2.95e-07 GGACTCAGAA CTGGCAGCCAGCCAGGGCTC ACTCAGGTGC chr21:16420012-16420512 + 61 3.58e-07 GCACATGATT TTGGCACTTGGCCAAAATCA ACTTCCCAGC chr17:29042478-29042978 - 56 3.94e-07 CGCTAAGAAC TTGGCACGATGCCCAGAATA AGACCCACCT chr5:81736046-81736546 + 15 3.94e-07 AAGCACAAAA TTGGCGCTATGCCAAAAGCC CTGTTTGCTT chr10:102766773-10276727 - 30 4.32e-07 CCCAACCATA CTGGCAAGTAGCCAAGAATT ACATGAAAAT chr1:12478148-12478648 + 56 4.32e-07 TGATTGCGGT CTGGCCCAATGCCAGGCCCA AGCCTGACCG chr1:229221453-229221953 + 45 5.64e-07 CACATTTTCT TTGGCAATAGGCCAACTATT TGTTCCTTTG chr3:169657305-169657805 + 55 5.64e-07 TTGTACAGAA TTGGCAAGAAGCCAGAACCC AGTCTCCAGA chr5:146213412-146213912 - 29 5.64e-07 TCCTACACCT TTGGCCCCAAGCCAAAAAAC ACTACTGAAA chr11:3443916-3444416 - 5 5.64e-07 CAAAAAGAGG TTGGCGCAGAGCCAGGCGAC TGAC chr12:56636701-56637201 - 36 6.13e-07 GGAGGGCTTT TTGGCGCGGGGCCAGGGGTG GAGTAGGGGC chr1:44327743-44328243 - 29 6.13e-07 GCCAGCTTCC CTGGCTCCTGGCCAAGTAGT CTGACCAGAA chr10:61974528-61975028 - 28 6.66e-07 TTTAGACCGC TTGGCAAGCAGCCAAGCACT AGTCATGAGG chr1:21939564-21940064 - 22 6.66e-07 GCCACTAGGG CTGGCCACCTGCCAGCTCTG AAGTCAGTGG chr19:29671747-29672247 + 30 7.23e-07 TGGGACCTGC TTGGAACCGTGCCAAGCtac ttatgaagca chr10:124792024-12479252 + 39 7.83e-07 ATTTGGCTCC TTGGCAAGAGGCCAACTTCG TTTCTGGCTA chr11:114159932-11416043 + 50 9.13e-07 CAGGCCAGGC CTGGCTGCGAGCCAGACTTG TGGGTACAGT chr19:41501302-41501802 - 58 9.84e-07 GATGGTTCCT TTGGCTCTCTGCCAATACAG GGTGAATCAT chr14:91155040-91155540 + 23 9.84e-07 cactgtgttt ttggcacggggcccagagta ATAAACATGG chr15:70062314-70062814 + 30 1.06e-06 CCGCCTCTGG CTGGCAGGCGGCCAAAAAAC TAAGTATTTT chr15:74546105-74546605 + 66 1.14e-06 TGCCCCCGCC TTGGCAGCTGGCCAGCGTCT GCGTGTGTGC chr19:30870837-30871337 + 28 1.14e-06 AGGAATGCAT TTGGCGTGGTGCCAGCAGTA CACTCTAATT chr5:172437415-172437915 - 36 1.22e-06 GAAAAAAATA TTGGCAGCCTGCCACCTCCA GTGTGTCACT chr1:76759930-76760430 - 7 1.22e-06 CCTGCATGGG TTGGCCTGGGGCCAAATCTC TTGCCT chr17:60641727-60642227 + 48 1.31e-06 AAAAAGGGAA TTGGCTGTCTGCCAGTTTCC AAGGCACCTC chr17:58391428-58391928 - 30 1.40e-06 GTAAGAATTT CGGGCACCTGGCCAAGATAC ACATTGCCTG chr1:232620484-232620984 - 22 1.60e-06 TTGTTTAAAA CTGGCAGTTTGCCAGTCAGA ATAGCTCTGA chr8:16825906-16826406 + 50 1.70e-06 ACCTAATTTC TGGGCACCGTGCCACATTTC TAGTCATTCA chr1:234724134-234724634 - 58 1.81e-06 AATGAGGCCT CTGGCGGGCAGCCAAGTTAC AAAGAACAAA chr1:15886170-15886670 + 38 1.93e-06 CCAGTTTGAG TTGGCTGCTTGCCACCTCCC GGAGGCTTCC chr5:140295376-140295876 - 45 2.05e-06 ATCCAGTCTT TTGGCGTGTTGCCAGCACAT TTTAGTTCTC chr6:15956222-15956722 + 5 2.31e-06 acac ttggaagagagccaagtggg cgacttgaga chr11:126153958-12615445 - 81 2.45e-06 . CTGGCGCTCTGCCAATTAGT GACACTTTGA chr5:32489724-32490224 + 5 2.59e-06 GGCC TGGGCAGGAGGCCAGGCTGG GATAATTACT chr5:159341790-159342290 + 45 2.89e-06 GTCTATCTGA TGGGCTGTTTGCCAGAAAAG CCTTCTGAAA chr4:144591276-144591776 - 30 3.22e-06 ATGCCCCACT CTGGCAAGAAGCCCAGAGTG AGGGCTTTCT chr10:103908271-10390877 - 49 3.58e-06 ATATGGCTTT TGGGCCATCTGCCAGGTGGC CGCTCCCTGC chr16:3020678-3021178 - 75 5.53e-06 CACTCC TGGGCACCGGGCCCGACCCC AGTCCCTCCC chr5:139517798-139518298 + 76 8.74e-06 GTGACTTCAT CCGGCCCGGGGCCAAGGCCC GGCCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGGCACNKTGCCARGWNYB MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:27116202-27116702 1.1e-10 22_[-4]_58 chr12:120646972-12064747 4.5e-10 47_[-4]_33 chr1:45875942-45876442 6e-10 33_[+4]_47 chr12:120091285-12009178 7.9e-10 49_[-4]_31 chr5:41747192-41747692 1e-09 41_[+4]_39 chr6:31777119-31777619 1.3e-09 47_[-4]_33 chr18:45755950-45756450 1.3e-09 38_[+4]_42 chr1:234977857-234978357 1.7e-09 30_[+4]_50 chr1:52502760-52503260 1.7e-09 28_[-4]_52 chr19:48539581-48540081 2.2e-09 30_[+4]_50 chr14:95291769-95292269 2.2e-09 24_[-4]_56 chr5:177404094-177404594 2.2e-09 31_[+4]_49 chr1:181127024-181127524 3.4e-09 50_[-4]_30 chr22:46053564-46054064 3.4e-09 30_[+4]_50 chr2:165825018-165825518 4.3e-09 29_[-4]_51 chr12:65624495-65624995 4.3e-09 31_[+4]_49 chr7:128523196-128523696 5.3e-09 48_[+4]_32 chr12:121404665-12140516 6.5e-09 51_[-4]_29 chr15:58755918-58756418 6.5e-09 17_[-4]_63 chr10:88092912-88093412 7.9e-09 57_[+4]_23 chr1:47469295-47469795 7.9e-09 59_[+4]_21 chr7:104884059-104884559 7.9e-09 54_[+4]_26 chr12:57245180-57245680 9.5e-09 53_[-4]_27 chr22:29821297-29821797 1.1e-08 74_[+4]_6 chr14:69716061-69716561 1.4e-08 31_[+4]_49 chr16:22279960-22280460 1.4e-08 24_[-4]_56 chr12:56150496-56150996 1.6e-08 52_[-4]_28 chr13:98507154-98507654 1.6e-08 27_[-4]_53 chr3:99868298-99868798 1.6e-08 19_[+4]_61 chr1:80054137-80054637 1.9e-08 53_[-4]_27 chr17:21040145-21040645 1.9e-08 74_[-4]_6 chr1:184029092-184029592 2.7e-08 44_[+4]_36 chr19:7699315-7699815 2.7e-08 40_[-4]_40 chr5:109468676-109469176 3.1e-08 31_[-4]_49 chr3:188348596-188349096 4.2e-08 26_[-4]_54 chr2:178484602-178485102 4.9e-08 50_[+4]_30 chr5:10288439-10288939 4.9e-08 44_[-4]_36 chr1:234523521-234524021 5.6e-08 50_[+4]_30 chr2:63064155-63064655 5.6e-08 39_[+4]_41 chr4:82796909-82797409 5.6e-08 48_[+4]_32 chrX:13647534-13648034 5.6e-08 56_[+4]_24 chr6:80132914-80133414 6.4e-08 53_[+4]_27 chr17:2264023-2264523 6.4e-08 42_[-4]_38 chr16:1271746-1272246 7.4e-08 24_[+4]_56 chr1:230145444-230145944 7.4e-08 6_[-4]_74 chr5:10601229-10601729 8.4e-08 21_[-4]_59 chr1:112700752-112701252 8.4e-08 15_[+4]_65 chr8:17495787-17496287 8.4e-08 49_[-4]_31 chr12:31636601-31637101 8.4e-08 66_[-4]_14 chr1:110176218-110176718 9.6e-08 40_[+4]_40 chr10:87586160-87586660 1.1e-07 55_[+4]_25 chr6:118660193-118660693 1.1e-07 32_[+4]_48 chr16:75054151-75054651 1.1e-07 35_[+4]_45 chr16:29943416-29943916 1.2e-07 32_[-4]_48 chr5:37717532-37718032 1.2e-07 14_[+4]_66 chr17:40314515-40315015 1.2e-07 31_[-4]_49 chr1:78620124-78620624 1.2e-07 66_[-4]_14 chr1:221284029-221284529 1.2e-07 44_[-4]_36 chr1:235067813-235068313 1.4e-07 5_[-4]_75 chr5:170755607-170756107 1.4e-07 54_[+4]_26 chr10:21724676-21725176 1.5e-07 61_[-4]_19 chr17:38881482-38881982 1.5e-07 34_[+4]_46 chr18:73987173-73987673 1.5e-07 61_[-4]_19 chr18:70464633-70465133 1.9e-07 52_[-4]_28 chr10:18607459-18607959 1.9e-07 68_[+4]_12 chr5:77168820-77169320 1.9e-07 51_[+4]_29 chr12:29350031-29350531 1.9e-07 29_[-4]_51 chr20:50366563-50367063 1.9e-07 53_[-4]_27 chr15:89383557-89384057 2.2e-07 26_[-4]_54 chr13:112849470-11284997 2.4e-07 33_[-4]_47 chr18:48901898-48902398 2.4e-07 46_[+4]_34 chr17:73474231-73474731 2.4e-07 51_[+4]_29 chr13:67224137-67224637 2.4e-07 55_[+4]_25 chr17:46742768-46743268 2.4e-07 7_[-4]_73 chr8:60619587-60620087 2.7e-07 32_[+4]_48 chr7:20514317-20514817 2.7e-07 57_[-4]_23 chr14:69008233-69008733 2.7e-07 41_[+4]_39 chr1:153880941-153881441 2.9e-07 46_[+4]_34 chr2:232473335-232473835 2.9e-07 35_[-4]_45 chr1:43836434-43836934 2.9e-07 52_[+4]_28 chr21:16420012-16420512 3.6e-07 60_[+4]_20 chr17:29042478-29042978 3.9e-07 55_[-4]_25 chr5:81736046-81736546 3.9e-07 14_[+4]_66 chr10:102766773-10276727 4.3e-07 29_[-4]_51 chr1:12478148-12478648 4.3e-07 55_[+4]_25 chr1:229221453-229221953 5.6e-07 44_[+4]_36 chr3:169657305-169657805 5.6e-07 54_[+4]_26 chr5:146213412-146213912 5.6e-07 28_[-4]_52 chr11:3443916-3444416 5.6e-07 4_[-4]_76 chr12:56636701-56637201 6.1e-07 35_[-4]_45 chr1:44327743-44328243 6.1e-07 28_[-4]_52 chr10:61974528-61975028 6.7e-07 27_[-4]_53 chr1:21939564-21940064 6.7e-07 21_[-4]_59 chr19:29671747-29672247 7.2e-07 29_[+4]_51 chr10:124792024-12479252 7.8e-07 38_[+4]_42 chr11:114159932-11416043 9.1e-07 49_[+4]_31 chr19:41501302-41501802 9.8e-07 57_[-4]_23 chr14:91155040-91155540 9.8e-07 22_[+4]_58 chr15:70062314-70062814 1.1e-06 29_[+4]_51 chr15:74546105-74546605 1.1e-06 65_[+4]_15 chr19:30870837-30871337 1.1e-06 27_[+4]_53 chr5:172437415-172437915 1.2e-06 35_[-4]_45 chr1:76759930-76760430 1.2e-06 6_[-4]_74 chr17:60641727-60642227 1.3e-06 47_[+4]_33 chr17:58391428-58391928 1.4e-06 29_[-4]_51 chr1:232620484-232620984 1.6e-06 21_[-4]_59 chr8:16825906-16826406 1.7e-06 49_[+4]_31 chr1:234724134-234724634 1.8e-06 57_[-4]_23 chr1:15886170-15886670 1.9e-06 37_[+4]_43 chr5:140295376-140295876 2.1e-06 44_[-4]_36 chr6:15956222-15956722 2.3e-06 4_[+4]_76 chr11:126153958-12615445 2.4e-06 80_[-4] chr5:32489724-32490224 2.6e-06 4_[+4]_76 chr5:159341790-159342290 2.9e-06 44_[+4]_36 chr4:144591276-144591776 3.2e-06 29_[-4]_51 chr10:103908271-10390877 3.6e-06 48_[-4]_32 chr16:3020678-3021178 5.5e-06 74_[-4]_6 chr5:139517798-139518298 8.7e-06 75_[+4]_5 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGGCACNKTGCCARGWNYB MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YTGGCACNKTGCCARGWNYB width=20 seqs=118 chr1:27116202-27116702 ( 23) TTGGCACTGTGCCAGGATTC 1 chr12:120646972-12064747 ( 48) TTGGCACTGTGCCAAGCATC 1 chr1:45875942-45876442 ( 34) TTGGCAGTGTGCCAAGAATG 1 chr12:120091285-12009178 ( 50) CTGGCACTGTGCCAGGTATT 1 chr5:41747192-41747692 ( 42) TTGGCACTGTGCCAAGTGTT 1 chr6:31777119-31777619 ( 48) CTGGCACTGTGCCAGGCCTG 1 chr18:45755950-45756450 ( 39) TTGGCACAGTGCCAGGAAAC 1 chr1:234977857-234978357 ( 31) TTGGCACTGTGCCAGGCAGG 1 chr1:52502760-52503260 ( 29) TTGGCACGGTGCCAGGTCCA 1 chr19:48539581-48540081 ( 31) TTGGCACTGTGCCAGGCACT 1 chr14:95291769-95292269 ( 25) TTGGCACAGTGCCAGGAACA 1 chr5:177404094-177404594 ( 32) CTGGCACTGTGCCAGGTCGC 1 chr1:181127024-181127524 ( 51) TTGGCACAGTGCCAGGTGCT 1 chr22:46053564-46054064 ( 31) CTGGCACCGTGCCAGGCTCG 1 chr2:165825018-165825518 ( 30) TTGGCACTGTGCCAAGCCAC 1 chr12:65624495-65624995 ( 32) TTGGCACTTTGCCAAGTTTT 1 chr7:128523196-128523696 ( 49) CTGGCAGCATGCCAGGAATG 1 chr12:121404665-12140516 ( 52) CTGGCACAGTGCCAGGATTT 1 chr15:58755918-58756418 ( 18) TTGGCACTGTGCCAAGGTTG 1 chr10:88092912-88093412 ( 58) CTGGCACTGTGCCAGCAGTG 1 chr1:47469295-47469795 ( 60) CTGGCACTTTGCCAGGTACT 1 chr7:104884059-104884559 ( 55) TTGGCAGCTTGCCAAGCATG 1 chr12:57245180-57245680 ( 54) CTGGCACTGAGCCAAGATTG 1 chr22:29821297-29821797 ( 75) TTGGCAGAATGCCAGGTCCC 1 chr14:69716061-69716561 ( 32) CTGGCAGCATGCCAGGATTC 1 chr16:22279960-22280460 ( 25) TTGGCACCTTGCCAGGAGAT 1 chr12:56150496-56150996 ( 53) TTGGCATTTTGCCAAGTATG 1 chr13:98507154-98507654 ( 28) TTGGCCCTGTGCCAGGAGCC 1 chr3:99868298-99868798 ( 20) TTGGCACTGTGCCAACTGCT 1 chr1:80054137-80054637 ( 54) TTGGCTCCGAGCCAAGAATG 1 chr17:21040145-21040645 ( 75) TTGGCAGTGTGCCAGCAAGG 1 chr1:184029092-184029592 ( 45) CTGGCAGCTTGCCAAGCCTG 1 chr19:7699315-7699815 ( 41) CTGGCACAGAGCCAGGAAGG 1 chr5:109468676-109469176 ( 32) TTGGCTCCCTGCCAAGAACC 1 chr3:188348596-188349096 ( 27) CTGGCAGCATGCCAGGCATT 1 chr2:178484602-178485102 ( 51) TTGGCATGGAGCCAAGTCTG 1 chr5:10288439-10288939 ( 45) TTGGCCCGGTGCCAGGTGGC 1 chr1:234523521-234524021 ( 51) CTGGCAGGCTGCCAGGTTCC 1 chr2:63064155-63064655 ( 40) TTGGCACAGTGCCAGACACA 1 chr4:82796909-82797409 ( 49) CTGGCACCATGCCAAAAAAG 1 chrX:13647534-13648034 ( 57) CTGGCAGCATGCCAGGTCAT 1 chr6:80132914-80133414 ( 54) TTGGCATTGTGCCAGCACTT 1 chr17:2264023-2264523 ( 43) TTGGCTCCTTGCCAAGTTAG 1 chr16:1271746-1272246 ( 25) TTGGCACCCTGCCAGCTGGT 1 chr1:230145444-230145944 ( 7) TTGGCACTATGCCAAGGTGG 1 chr5:10601229-10601729 ( 22) TTGGCACCCAGCCAGGTTGA 1 chr1:112700752-112701252 ( 16) TTGGCCCAGAGCCAGGCATG 1 chr8:17495787-17496287 ( 50) TTGGCAAAGTGCCAGATTTG 1 chr12:31636601-31637101 ( 67) CTGGCACAAAGCCAGGAAGC 1 chr1:110176218-110176718 ( 41) TTGGCTCCATGCCAGATGTG 1 chr10:87586160-87586660 ( 56) TTGGCAGCCTGCCAAATCCT 1 chr6:118660193-118660693 ( 33) TTGGCAGATTGCCAGATAAG 1 chr16:75054151-75054651 ( 36) CTGGCACCCTGCCAGTTCTG 1 chr16:29943416-29943916 ( 33) TTGGCAGCTGGCCAAGTTAG 1 chr5:37717532-37718032 ( 15) TTGGCAGGTAGCCAGCTCTC 1 chr17:40314515-40315015 ( 32) CTGGCACCTTGCCAGCCCCA 1 chr1:78620124-78620624 ( 67) CTGGCAGCATGCCAACTGCC 1 chr1:221284029-221284529 ( 45) TTGGCATTTTGCCAACTACC 1 chr1:235067813-235068313 ( 6) TTGGCTCCCAGCCAGGTGCG 1 chr5:170755607-170756107 ( 55) TTGGCATCTTGCCAAGAAAA 1 chr10:21724676-21725176 ( 62) TTGGCAGCAAGCCAGCTCTA 1 chr17:38881482-38881982 ( 35) CTGGCACTTTGCCAGGGAGT 1 chr18:73987173-73987673 ( 62) TTGGCCCACAGCCAAGAATG 1 chr18:70464633-70465133 ( 53) TTGGCGCGATGCCAGCAACG 1 chr10:18607459-18607959 ( 69) TTGGCATGGGGCCAAGAATA 1 chr5:77168820-77169320 ( 52) TTGGCGCAGTGCCAGCTCCT 1 chr12:29350031-29350531 ( 30) CTGGCTCTTTGCCAAAAATG 1 chr20:50366563-50367063 ( 54) CTGGCACAGAGCCAGGGCAG 1 chr15:89383557-89384057 ( 27) CTGGCTCTGAGCCAAGACGC 1 chr13:112849470-11284997 ( 34) CTGGCACACAGCCAAAACTC 1 chr18:48901898-48902398 ( 47) TTGGCCCCGGGCCAGGGCCG 1 chr17:73474231-73474731 ( 52) CTGGCCACGTGCCAAGTTCG 1 chr13:67224137-67224637 ( 56) TTGGCACCTGGCCAGCACAA 1 chr17:46742768-46743268 ( 8) TTGGCTCAGAGCCAAGAGTA 1 chr8:60619587-60620087 ( 33) TTGGCCTAATGCCAAGTCTG 1 chr7:20514317-20514817 ( 58) CTGGCTCATTGCCAACTCTC 1 chr14:69008233-69008733 ( 42) TTGGCAACATGCCAGATTGC 1 chr1:153880941-153881441 ( 47) CTGGCATGATGCCAACACTC 1 chr2:232473335-232473835 ( 36) TTGGCCAAGTGCCAAGTGCC 1 chr1:43836434-43836934 ( 53) CTGGCAGCCAGCCAGGGCTC 1 chr21:16420012-16420512 ( 61) TTGGCACTTGGCCAAAATCA 1 chr17:29042478-29042978 ( 56) TTGGCACGATGCCCAGAATA 1 chr5:81736046-81736546 ( 15) TTGGCGCTATGCCAAAAGCC 1 chr10:102766773-10276727 ( 30) CTGGCAAGTAGCCAAGAATT 1 chr1:12478148-12478648 ( 56) CTGGCCCAATGCCAGGCCCA 1 chr1:229221453-229221953 ( 45) TTGGCAATAGGCCAACTATT 1 chr3:169657305-169657805 ( 55) TTGGCAAGAAGCCAGAACCC 1 chr5:146213412-146213912 ( 29) TTGGCCCCAAGCCAAAAAAC 1 chr11:3443916-3444416 ( 5) TTGGCGCAGAGCCAGGCGAC 1 chr12:56636701-56637201 ( 36) TTGGCGCGGGGCCAGGGGTG 1 chr1:44327743-44328243 ( 29) CTGGCTCCTGGCCAAGTAGT 1 chr10:61974528-61975028 ( 28) TTGGCAAGCAGCCAAGCACT 1 chr1:21939564-21940064 ( 22) CTGGCCACCTGCCAGCTCTG 1 chr19:29671747-29672247 ( 30) TTGGAACCGTGCCAAGCTAC 1 chr10:124792024-12479252 ( 39) TTGGCAAGAGGCCAACTTCG 1 chr11:114159932-11416043 ( 50) CTGGCTGCGAGCCAGACTTG 1 chr19:41501302-41501802 ( 58) TTGGCTCTCTGCCAATACAG 1 chr14:91155040-91155540 ( 23) TTGGCACGGGGCCCAGAGTA 1 chr15:70062314-70062814 ( 30) CTGGCAGGCGGCCAAAAAAC 1 chr15:74546105-74546605 ( 66) TTGGCAGCTGGCCAGCGTCT 1 chr19:30870837-30871337 ( 28) TTGGCGTGGTGCCAGCAGTA 1 chr5:172437415-172437915 ( 36) TTGGCAGCCTGCCACCTCCA 1 chr1:76759930-76760430 ( 7) TTGGCCTGGGGCCAAATCTC 1 chr17:60641727-60642227 ( 48) TTGGCTGTCTGCCAGTTTCC 1 chr17:58391428-58391928 ( 30) CGGGCACCTGGCCAAGATAC 1 chr1:232620484-232620984 ( 22) CTGGCAGTTTGCCAGTCAGA 1 chr8:16825906-16826406 ( 50) TGGGCACCGTGCCACATTTC 1 chr1:234724134-234724634 ( 58) CTGGCGGGCAGCCAAGTTAC 1 chr1:15886170-15886670 ( 38) TTGGCTGCTTGCCACCTCCC 1 chr5:140295376-140295876 ( 45) TTGGCGTGTTGCCAGCACAT 1 chr6:15956222-15956722 ( 5) TTGGAAGAGAGCCAAGTGGG 1 chr11:126153958-12615445 ( 81) CTGGCGCTCTGCCAATTAGT 1 chr5:32489724-32490224 ( 5) TGGGCAGGAGGCCAGGCTGG 1 chr5:159341790-159342290 ( 45) TGGGCTGTTTGCCAGAAAAG 1 chr4:144591276-144591776 ( 30) CTGGCAAGAAGCCCAGAGTG 1 chr10:103908271-10390877 ( 49) TGGGCCATCTGCCAGGTGGC 1 chr16:3020678-3021178 ( 75) TGGGCACCGGGCCCGACCCC 1 chr5:139517798-139518298 ( 76) CCGGCCCGGGGCCAAGGCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGGCACNKTGCCARGWNYB MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 20 n= 48519 bayes= 9.33907 E= 1.0e-269 -1353 51 -1353 135 -1353 -484 -226 188 -1353 -1353 204 -1353 -1353 -1353 204 -1353 -392 201 -1353 -1353 140 -104 -168 -101 -133 122 -4 -146 -46 44 -32 17 -33 -60 77 -22 -27 -1353 -76 133 -1353 -1353 204 -1353 -1353 204 -1353 -1353 -1353 204 -1353 -1353 191 -285 -1353 -1353 81 -326 111 -1353 -67 -32 130 -260 47 -52 -168 64 33 24 -45 -27 -60 24 -68 61 -83 36 51 -39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGGCACNKTGCCARGWNYB MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 20 nsites= 118 E= 1.0e-269 0.000000 0.347458 0.000000 0.652542 0.000000 0.008475 0.050847 0.940678 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.016949 0.983051 0.000000 0.000000 0.677966 0.118644 0.076271 0.127119 0.101695 0.567797 0.237288 0.093220 0.186441 0.330508 0.194915 0.288136 0.203390 0.161017 0.415254 0.220339 0.211864 0.000000 0.144068 0.644068 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.966102 0.033898 0.000000 0.000000 0.449153 0.025424 0.525424 0.000000 0.161017 0.194915 0.601695 0.042373 0.355932 0.169492 0.076271 0.398305 0.322034 0.288136 0.177966 0.211864 0.169492 0.288136 0.152542 0.389831 0.144068 0.313559 0.347458 0.194915 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTGGCACNKTGCCARGWNYB MEME-4 regular expression -------------------------------------------------------------------------------- [TC]TGGCA[CG][CT][GTA][TA]GCCA[GA]G[TA][ACT][TC][GC] -------------------------------------------------------------------------------- Time 1903.40 secs. ******************************************************************************** ******************************************************************************** MOTIF CACTTYRAGGGAGGGR MEME-5 width = 16 sites = 86 llr = 1230 E-value = 6.4e-192 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACTTYRAGGGAGGGR MEME-5 Description -------------------------------------------------------------------------------- Simplified A :a::::4a11:81:24 pos.-specific C 8:9:14:::::::::: probability G :::::16:899:9986 matrix T 2:1995:::::1:::: bits 2.0 1.8 1.6 * * * * 1.4 **** * ** ** Relative 1.2 ***** ******* Entropy 1.0 ***** ******** (20.6 bits) 0.8 ***** ********** 0.6 ***** ********** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel CACTTTGAGGGAGGGG consensus CA A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTYRAGGGAGGGR MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr18:62310801-62311301 - 29 2.11e-10 CAGGAGCAAG CACTTTGAGGGAGGGG TAAAGGGAAC chr18:31794993-31795493 + 70 2.11e-10 cagaaacaga cactttgagggagggg gaaggggaac chr20:15774827-15775327 + 51 2.11e-10 cagaaacaga cactttgagggagggg caaagggaac chr6:15553064-15553564 + 7 2.11e-10 cacaaa cactttgagggagggg cagagggaac chr16:74283713-74284213 - 52 6.32e-10 CAAAAGCAGG CACTTTGAGGGAGGGA AGGGTGGAAT chr10:25974795-25975295 + 35 6.32e-10 caaaagcagg cactttgagggaggga aggataagac chr2:47676504-47677004 - 31 1.06e-09 CAGAAACAGG CACTTTAAGGGAGGGG TAAAGGGAGC chr2:235046889-235047389 + 56 1.27e-09 caaaaacaga cacttcaagggagggg caaaggcaac chr13:36610500-36611000 + 51 1.27e-09 tgaaaacaga cacttcaagggagggg caaatggaat chr14:31241471-31241971 + 50 1.27e-09 cagaaacagg cacttcaagggagggg cagagggaac chr3:39022117-39022617 - 32 1.27e-09 CAGAAACAGA CACTTCAAGGGAGGGG CAAAGGGAGC chr13:110986520-11098702 - 49 1.73e-09 TGAAAGCAGG CACTTCAAGGGAGGGA AGGATAAGAC chr1:150196425-150196925 - 31 1.95e-09 TGAAAGCAGG CACTTTGAGGGAGGAG AGGGTGAGGC chr4:80074547-80075047 + 47 2.81e-09 aaaaagcagg cactttgagggaggaa agggtggaac chr8:33648777-33649277 + 32 2.81e-09 caaaagcaag cactttgagggaggaa ggatgaaaca chr6:101860076-101860576 + 41 2.81e-09 caaaagcaga tactttgagggagggg caaaaggaac chr6:106911216-106911716 + 59 4.96e-09 ccagaaacag cacttcaagggaggag taaagggaac chr19:29914883-29915383 + 16 4.96e-09 cagaaacagt cacttcaagggaggag caaagggaat chr4:3755135-3755635 - 42 5.41e-09 TGCAAACAGA CATTTTGAGGGAGGGG CAAAGGGAAC chr2:218707708-218708208 + 55 5.41e-09 tgaaagcaag tactttgagggaggga taaagggaac chr9:84303714-84304214 - 42 5.41e-09 CAGAAACAAG TACTTTGAGGGAGGGA AGAATAAGAC chr14:90550255-90550755 - 40 8.74e-09 CAAAAGCAAG CACTTTGAGAGAGGGG AGGGTGGAAC chr1:232223214-232223714 - 25 8.74e-09 CAGAAATAGG CACTCTGAGGGAGGGG CAAAGGGAAA chr8:74099487-74099987 - 49 8.74e-09 CAAAAACAGA TACTTCAAGGGAGGGG AAAAGGGAAC chr14:39486443-39486943 + 19 8.74e-09 cataaacaga tacttcaagggagggg caaagagcag chr5:168477347-168477847 - 56 8.74e-09 TGAAAACATG CACTTTGAGGGAAGGG CAGAGGAAAA chr17:41360219-41360719 + 52 1.02e-08 caagagtaag cattttgagggaggga aatgtgagaa chr19:29295261-29295761 - 48 1.02e-08 CAGAAACAGA CACTTTCAGGGAGGGG CAAAGGGAAC chr2:134764761-134765261 - 39 1.29e-08 TAAAAGCAGG TACTTCAAGGGAGGGA AAGATGAGAC chr5:85452034-85452534 + 75 1.29e-08 tgagtgcaag cactttgagagaggga aagataagac chr18:13328196-13328696 - 36 1.47e-08 CAGAAACAGG CACTTCAAGGGTGGGA AGAATAAGAC chr9:83336971-83337471 - 39 1.47e-08 TGGAAACAAG CACTTCAAGGGTGGGA AGAATAAGAC chr2:11766194-11766694 + 69 1.47e-08 cagaaacaga cactttgaggaagggg caaagagacc chr1:231066759-231067259 + 52 1.87e-08 cagaaacaaa cacttcaagggaaggg caaagggaac chr18:50552485-50552985 - 26 1.87e-08 CAAAAGCAGA CACTTTGAGGGAGGGT AAGATGGAAT chr9:32498171-32498671 - 33 2.06e-08 AGGAAACAGG CACTTGGAGGGTGGGG AGAGTAAAAC chr17:81980420-81980920 + 44 2.76e-08 tggaaacaga cacttcaagagaggga agaataagac chr6:37665716-37666216 - 42 3.15e-08 TGAAAGCAGT CACTTTGAAGGAGGAA AGGTGAGACA chr8:19537288-19537788 - 50 3.15e-08 CAAAAGCAGA CACTTTGAGTGAGGGG TAAAGGGAAC chr10:70575612-70576112 + 44 4.07e-08 cagaaacaga cacttcgaaggtgggg agaataagac chr19:38995238-38995738 - 24 5.39e-08 CAAAAACAGG CACTTTGAAGGTGGGA AGATGAAGAC chr8:41076341-41076841 - 20 5.39e-08 CAGAAACAGG CATTTCAAGGGAGGAG CAAAGGGATC chr8:144068040-144068540 - 23 7.15e-08 CAAAAACAGA CACTTCATGGGAGGGG CAAGGGGAAC chr6:106829667-106830167 - 31 7.15e-08 CAGTAACAGG CACTTCATGGGAGGGG TAACAGGAAT chr20:16418623-16419123 - 35 7.15e-08 CAGAAGCAGA CACATTGAGGGAGGGG GAAAGGGAAC chr4:176619305-176619805 + 65 9.19e-08 caaaaacaga cacctggagggagggg caaagagaac chr1:226450676-226451176 - 36 1.12e-07 CAGAAACAGA TACTCCAAGGGAGGGG CAGAGGGGTC chr6:143841056-143841556 + 51 1.23e-07 caaaaacata cattctgagggaggga caaagtgaga chr3:184952280-184952780 + 55 1.23e-07 tgaaaataag cagttcaagggagggg taaagggaat chr11:57735355-57735855 + 47 1.35e-07 taaaaacaga cacttggagtgagggg taaaggaaac chr9:108777108-108777608 - 62 1.35e-07 CAAAAGCAAG CACTTGGAAGGAGGAA GGCTAAGACA chr21:42620144-42620644 + 48 1.58e-07 cacaaacagg cacctcaagggaggag caaagggaag chr5:71946183-71946683 + 62 1.58e-07 cagaaacctg cactttgagggtggta agaataagac chr2:85721004-85721504 + 41 1.91e-07 tgagaacagg cactttgaggctggga agactaagac chr12:6092747-6093247 - 31 2.36e-07 TGAAAGCAGG CACTTCAAGGGAGAAA GGGGTGGAAT chr22:39452117-39452617 + 48 2.36e-07 caggaacaca tgcttcaagggagggg caaagggaac chr2:113809360-113809860 - 34 2.54e-07 TGGAAACAGA CATTTTGAGGGAGTGG CAAAAGGAAC chr5:160501318-160501818 + 22 3.01e-07 ccaaaacaga tactctgagggtgggg caaatggaat chr19:29728138-29728638 - 52 3.36e-07 AATAGGCAGG CACTTTGAGGAAGGGT GGGAGGGGAT chr10:72857878-72858378 + 51 3.71e-07 caaaaacaga cactttgaggaagagg caaaaagaac chr5:77029734-77030234 - 20 3.71e-07 TGAGAACAGA CACTTGGAAGGAAGGA CAAAGGGAAC chr1:21991522-21992022 + 26 4.35e-07 cagaaacagg cactccaaaggaggag ggattgaagt chr4:184617464-184617964 + 47 4.69e-07 tggaaacaca tatttcaaaggagggg taaagggaac chr22:44500502-44501002 - 43 5.11e-07 CATAAACAGG CACTTCAAGGGTTGGA AGAGTAAGAC chr17:59039006-59039506 - 73 5.11e-07 TAAAAGCAGG CACTTTGCAGGAGGGA AGGGTAACAT chrX:154961956-154962456 - 9 5.11e-07 TGGAAGCAAG CACTTTGAAGAAGGAA GGATGAGA chr8:15317872-15318372 + 59 5.63e-07 cagaaacagg cactttgagcgaaggg caaagtgaac chr1:5965836-5966336 - 5 6.19e-07 CAGAAACAGA CCCTTCGAGAGAGGGG CAGA chr14:77091203-77091703 + 46 6.64e-07 taagagcaat cacttcaagggaaggc taaagcaaac chr6:2543072-2543572 - 37 7.77e-07 TAGAAACAGA CACTTAGAAGGTGGGA AGAATGTAAA chrX:11959030-11959530 + 57 1.18e-06 tagaaacaga cacttcaaggcagtgg gtaaagagaa chr1:34637039-34637539 + 20 1.27e-06 caaaagcaag cactacaagggaggta agggtggaag chr6:153483174-153483674 - 39 1.27e-06 CAAAAACAAG CACTTTAAGAGTAGGA AGAACAAGAC chr9:136738025-136738525 + 52 1.64e-06 ctggaacaga cacttggaggggaggg acagagggga chr2:2900214-2900714 - 21 1.90e-06 TGGAAACAGA CACTAGGAGGCAGGGG CAAAGGGAAC chr7:98066071-98066571 + 51 2.20e-06 cagaagcagg tacgtggagggaggaa agaaggagac chr2:69646919-69647419 - 51 2.40e-06 TGAAAGCAGG TATTTAGAGGGAGGAA AAAGTGGAAC chr3:9361822-9362322 - 54 2.40e-06 CAAAAACAGG CACTTCCAGGGTTGGA AGAATAAGAC chr7:80734324-80734824 + 50 2.59e-06 cagaatcaga tacttccatggagggg cagagggaac chr19:28955958-28956458 + 1 2.78e-06 . catgttgagggaggtg tggagggaac chr16:14326035-14326535 + 12 2.98e-06 AACTTGGAAC CGCTCCAAGAGAGGGG ATTAAAGCAA chr1:59266234-59266734 + 43 3.21e-06 cagaaacagg caccttgagagagagg caacgggaac chr20:37095883-37096383 - 31 4.63e-06 CTTCTTATCA CATTTCCGGGGAGGGA CTGCTAGGAG chr6:160053901-160054401 + 50 6.17e-06 cagaaacaag cgctgggagggaggaa gactaagaca chr3:86388747-86389247 - 43 6.17e-06 CAGAAGCAGA CACTTCGACGGAGCAG CAAAAGGAAC chr1:232866831-232867331 + 47 1.58e-05 catgagcaag cactgtgaaggcggaa aggcgagaca -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTYRAGGGAGGGR MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:62310801-62311301 2.1e-10 28_[-5]_56 chr18:31794993-31795493 2.1e-10 69_[+5]_15 chr20:15774827-15775327 2.1e-10 50_[+5]_34 chr6:15553064-15553564 2.1e-10 6_[+5]_78 chr16:74283713-74284213 6.3e-10 51_[-5]_33 chr10:25974795-25975295 6.3e-10 34_[+5]_50 chr2:47676504-47677004 1.1e-09 30_[-5]_54 chr2:235046889-235047389 1.3e-09 55_[+5]_29 chr13:36610500-36611000 1.3e-09 50_[+5]_34 chr14:31241471-31241971 1.3e-09 49_[+5]_35 chr3:39022117-39022617 1.3e-09 31_[-5]_53 chr13:110986520-11098702 1.7e-09 48_[-5]_36 chr1:150196425-150196925 1.9e-09 30_[-5]_54 chr4:80074547-80075047 2.8e-09 46_[+5]_38 chr8:33648777-33649277 2.8e-09 31_[+5]_53 chr6:101860076-101860576 2.8e-09 40_[+5]_44 chr6:106911216-106911716 5e-09 58_[+5]_26 chr19:29914883-29915383 5e-09 15_[+5]_69 chr4:3755135-3755635 5.4e-09 41_[-5]_43 chr2:218707708-218708208 5.4e-09 54_[+5]_30 chr9:84303714-84304214 5.4e-09 41_[-5]_43 chr14:90550255-90550755 8.7e-09 39_[-5]_45 chr1:232223214-232223714 8.7e-09 24_[-5]_60 chr8:74099487-74099987 8.7e-09 48_[-5]_36 chr14:39486443-39486943 8.7e-09 18_[+5]_66 chr5:168477347-168477847 8.7e-09 55_[-5]_29 chr17:41360219-41360719 1e-08 51_[+5]_33 chr19:29295261-29295761 1e-08 47_[-5]_37 chr2:134764761-134765261 1.3e-08 38_[-5]_46 chr5:85452034-85452534 1.3e-08 74_[+5]_10 chr18:13328196-13328696 1.5e-08 35_[-5]_49 chr9:83336971-83337471 1.5e-08 38_[-5]_46 chr2:11766194-11766694 1.5e-08 68_[+5]_16 chr1:231066759-231067259 1.9e-08 51_[+5]_33 chr18:50552485-50552985 1.9e-08 25_[-5]_59 chr9:32498171-32498671 2.1e-08 32_[-5]_52 chr17:81980420-81980920 2.8e-08 43_[+5]_41 chr6:37665716-37666216 3.2e-08 41_[-5]_43 chr8:19537288-19537788 3.2e-08 49_[-5]_35 chr10:70575612-70576112 4.1e-08 43_[+5]_41 chr19:38995238-38995738 5.4e-08 23_[-5]_61 chr8:41076341-41076841 5.4e-08 19_[-5]_65 chr8:144068040-144068540 7.2e-08 22_[-5]_62 chr6:106829667-106830167 7.2e-08 30_[-5]_54 chr20:16418623-16419123 7.2e-08 34_[-5]_50 chr4:176619305-176619805 9.2e-08 64_[+5]_20 chr1:226450676-226451176 1.1e-07 35_[-5]_49 chr6:143841056-143841556 1.2e-07 50_[+5]_34 chr3:184952280-184952780 1.2e-07 54_[+5]_30 chr11:57735355-57735855 1.3e-07 46_[+5]_38 chr9:108777108-108777608 1.3e-07 61_[-5]_23 chr21:42620144-42620644 1.6e-07 47_[+5]_37 chr5:71946183-71946683 1.6e-07 61_[+5]_23 chr2:85721004-85721504 1.9e-07 40_[+5]_44 chr12:6092747-6093247 2.4e-07 30_[-5]_54 chr22:39452117-39452617 2.4e-07 47_[+5]_37 chr2:113809360-113809860 2.5e-07 33_[-5]_51 chr5:160501318-160501818 3e-07 21_[+5]_63 chr19:29728138-29728638 3.4e-07 51_[-5]_33 chr10:72857878-72858378 3.7e-07 50_[+5]_34 chr5:77029734-77030234 3.7e-07 19_[-5]_65 chr1:21991522-21992022 4.3e-07 25_[+5]_59 chr4:184617464-184617964 4.7e-07 46_[+5]_38 chr22:44500502-44501002 5.1e-07 42_[-5]_42 chr17:59039006-59039506 5.1e-07 72_[-5]_12 chrX:154961956-154962456 5.1e-07 8_[-5]_76 chr8:15317872-15318372 5.6e-07 58_[+5]_26 chr1:5965836-5966336 6.2e-07 4_[-5]_80 chr14:77091203-77091703 6.6e-07 45_[+5]_39 chr6:2543072-2543572 7.8e-07 36_[-5]_48 chrX:11959030-11959530 1.2e-06 56_[+5]_28 chr1:34637039-34637539 1.3e-06 19_[+5]_65 chr6:153483174-153483674 1.3e-06 38_[-5]_46 chr9:136738025-136738525 1.6e-06 51_[+5]_33 chr2:2900214-2900714 1.9e-06 20_[-5]_64 chr7:98066071-98066571 2.2e-06 50_[+5]_34 chr2:69646919-69647419 2.4e-06 50_[-5]_34 chr3:9361822-9362322 2.4e-06 53_[-5]_31 chr7:80734324-80734824 2.6e-06 49_[+5]_35 chr19:28955958-28956458 2.8e-06 [+5]_84 chr16:14326035-14326535 3e-06 11_[+5]_73 chr1:59266234-59266734 3.2e-06 42_[+5]_42 chr20:37095883-37096383 4.6e-06 30_[-5]_54 chr6:160053901-160054401 6.2e-06 49_[+5]_35 chr3:86388747-86389247 6.2e-06 42_[-5]_42 chr1:232866831-232867331 1.6e-05 46_[+5]_38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTYRAGGGAGGGR MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACTTYRAGGGAGGGR width=16 seqs=86 chr18:62310801-62311301 ( 29) CACTTTGAGGGAGGGG 1 chr18:31794993-31795493 ( 70) CACTTTGAGGGAGGGG 1 chr20:15774827-15775327 ( 51) CACTTTGAGGGAGGGG 1 chr6:15553064-15553564 ( 7) CACTTTGAGGGAGGGG 1 chr16:74283713-74284213 ( 52) CACTTTGAGGGAGGGA 1 chr10:25974795-25975295 ( 35) CACTTTGAGGGAGGGA 1 chr2:47676504-47677004 ( 31) CACTTTAAGGGAGGGG 1 chr2:235046889-235047389 ( 56) CACTTCAAGGGAGGGG 1 chr13:36610500-36611000 ( 51) CACTTCAAGGGAGGGG 1 chr14:31241471-31241971 ( 50) CACTTCAAGGGAGGGG 1 chr3:39022117-39022617 ( 32) CACTTCAAGGGAGGGG 1 chr13:110986520-11098702 ( 49) CACTTCAAGGGAGGGA 1 chr1:150196425-150196925 ( 31) CACTTTGAGGGAGGAG 1 chr4:80074547-80075047 ( 47) CACTTTGAGGGAGGAA 1 chr8:33648777-33649277 ( 32) CACTTTGAGGGAGGAA 1 chr6:101860076-101860576 ( 41) TACTTTGAGGGAGGGG 1 chr6:106911216-106911716 ( 59) CACTTCAAGGGAGGAG 1 chr19:29914883-29915383 ( 16) CACTTCAAGGGAGGAG 1 chr4:3755135-3755635 ( 42) CATTTTGAGGGAGGGG 1 chr2:218707708-218708208 ( 55) TACTTTGAGGGAGGGA 1 chr9:84303714-84304214 ( 42) TACTTTGAGGGAGGGA 1 chr14:90550255-90550755 ( 40) CACTTTGAGAGAGGGG 1 chr1:232223214-232223714 ( 25) CACTCTGAGGGAGGGG 1 chr8:74099487-74099987 ( 49) TACTTCAAGGGAGGGG 1 chr14:39486443-39486943 ( 19) TACTTCAAGGGAGGGG 1 chr5:168477347-168477847 ( 56) CACTTTGAGGGAAGGG 1 chr17:41360219-41360719 ( 52) CATTTTGAGGGAGGGA 1 chr19:29295261-29295761 ( 48) CACTTTCAGGGAGGGG 1 chr2:134764761-134765261 ( 39) TACTTCAAGGGAGGGA 1 chr5:85452034-85452534 ( 75) CACTTTGAGAGAGGGA 1 chr18:13328196-13328696 ( 36) CACTTCAAGGGTGGGA 1 chr9:83336971-83337471 ( 39) CACTTCAAGGGTGGGA 1 chr2:11766194-11766694 ( 69) CACTTTGAGGAAGGGG 1 chr1:231066759-231067259 ( 52) CACTTCAAGGGAAGGG 1 chr18:50552485-50552985 ( 26) CACTTTGAGGGAGGGT 1 chr9:32498171-32498671 ( 33) CACTTGGAGGGTGGGG 1 chr17:81980420-81980920 ( 44) CACTTCAAGAGAGGGA 1 chr6:37665716-37666216 ( 42) CACTTTGAAGGAGGAA 1 chr8:19537288-19537788 ( 50) CACTTTGAGTGAGGGG 1 chr10:70575612-70576112 ( 44) CACTTCGAAGGTGGGG 1 chr19:38995238-38995738 ( 24) CACTTTGAAGGTGGGA 1 chr8:41076341-41076841 ( 20) CATTTCAAGGGAGGAG 1 chr8:144068040-144068540 ( 23) CACTTCATGGGAGGGG 1 chr6:106829667-106830167 ( 31) CACTTCATGGGAGGGG 1 chr20:16418623-16419123 ( 35) CACATTGAGGGAGGGG 1 chr4:176619305-176619805 ( 65) CACCTGGAGGGAGGGG 1 chr1:226450676-226451176 ( 36) TACTCCAAGGGAGGGG 1 chr6:143841056-143841556 ( 51) CATTCTGAGGGAGGGA 1 chr3:184952280-184952780 ( 55) CAGTTCAAGGGAGGGG 1 chr11:57735355-57735855 ( 47) CACTTGGAGTGAGGGG 1 chr9:108777108-108777608 ( 62) CACTTGGAAGGAGGAA 1 chr21:42620144-42620644 ( 48) CACCTCAAGGGAGGAG 1 chr5:71946183-71946683 ( 62) CACTTTGAGGGTGGTA 1 chr2:85721004-85721504 ( 41) CACTTTGAGGCTGGGA 1 chr12:6092747-6093247 ( 31) CACTTCAAGGGAGAAA 1 chr22:39452117-39452617 ( 48) TGCTTCAAGGGAGGGG 1 chr2:113809360-113809860 ( 34) CATTTTGAGGGAGTGG 1 chr5:160501318-160501818 ( 22) TACTCTGAGGGTGGGG 1 chr19:29728138-29728638 ( 52) CACTTTGAGGAAGGGT 1 chr10:72857878-72858378 ( 51) CACTTTGAGGAAGAGG 1 chr5:77029734-77030234 ( 20) CACTTGGAAGGAAGGA 1 chr1:21991522-21992022 ( 26) CACTCCAAAGGAGGAG 1 chr4:184617464-184617964 ( 47) TATTTCAAAGGAGGGG 1 chr22:44500502-44501002 ( 43) CACTTCAAGGGTTGGA 1 chr17:59039006-59039506 ( 73) CACTTTGCAGGAGGGA 1 chrX:154961956-154962456 ( 9) CACTTTGAAGAAGGAA 1 chr8:15317872-15318372 ( 59) CACTTTGAGCGAAGGG 1 chr1:5965836-5966336 ( 5) CCCTTCGAGAGAGGGG 1 chr14:77091203-77091703 ( 46) CACTTCAAGGGAAGGC 1 chr6:2543072-2543572 ( 37) CACTTAGAAGGTGGGA 1 chrX:11959030-11959530 ( 57) CACTTCAAGGCAGTGG 1 chr1:34637039-34637539 ( 20) CACTACAAGGGAGGTA 1 chr6:153483174-153483674 ( 39) CACTTTAAGAGTAGGA 1 chr9:136738025-136738525 ( 52) CACTTGGAGGGGAGGG 1 chr2:2900214-2900714 ( 21) CACTAGGAGGCAGGGG 1 chr7:98066071-98066571 ( 51) TACGTGGAGGGAGGAA 1 chr2:69646919-69647419 ( 51) TATTTAGAGGGAGGAA 1 chr3:9361822-9362322 ( 54) CACTTCCAGGGTTGGA 1 chr7:80734324-80734824 ( 50) TACTTCCATGGAGGGG 1 chr19:28955958-28956458 ( 1) CATGTTGAGGGAGGTG 1 chr16:14326035-14326535 ( 12) CGCTCCAAGAGAGGGG 1 chr1:59266234-59266734 ( 43) CACCTTGAGAGAGAGG 1 chr20:37095883-37096383 ( 31) CATTTCCGGGGAGGGA 1 chr6:160053901-160054401 ( 50) CGCTGGGAGGGAGGAA 1 chr3:86388747-86389247 ( 43) CACTTCGACGGAGCAG 1 chr1:232866831-232867331 ( 47) CACTGTGAAGGCGGAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTYRAGGGAGGGR MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 50915 bayes= 6.88624 E= 6.4e-192 -1307 180 -1307 -76 190 -439 -280 -1307 -1307 186 -439 -129 -446 -280 -339 186 -346 -180 -339 179 -346 74 -122 86 49 -239 128 -1307 190 -439 -439 -346 -100 -439 180 -446 -165 -439 186 -346 -246 -280 191 -1307 171 -439 -439 -88 -165 -1307 188 -346 -288 -439 193 -346 -37 -1307 165 -288 58 -439 125 -346 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTYRAGGGAGGGR MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 86 E= 6.4e-192 0.000000 0.848837 0.000000 0.151163 0.953488 0.011628 0.034884 0.000000 0.000000 0.883721 0.011628 0.104651 0.011628 0.034884 0.023256 0.930233 0.023256 0.069767 0.023256 0.883721 0.023256 0.406977 0.104651 0.465116 0.360465 0.046512 0.593023 0.000000 0.953488 0.011628 0.011628 0.023256 0.127907 0.011628 0.848837 0.011628 0.081395 0.011628 0.883721 0.023256 0.046512 0.034884 0.918605 0.000000 0.837209 0.011628 0.011628 0.139535 0.081395 0.000000 0.895349 0.023256 0.034884 0.011628 0.930233 0.023256 0.197674 0.000000 0.767442 0.034884 0.383721 0.011628 0.581395 0.023256 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACTTYRAGGGAGGGR MEME-5 regular expression -------------------------------------------------------------------------------- CACTT[TC][GA]AGGGAGGG[GA] -------------------------------------------------------------------------------- Time 2309.64 secs. ******************************************************************************** ******************************************************************************** MOTIF AATATGTATAYTTRGCCAMCCY MEME-6 width = 22 sites = 22 llr = 450 E-value = 5.4e-061 ******************************************************************************** -------------------------------------------------------------------------------- Motif AATATGTATAYTTRGCCAMCCY MEME-6 Description -------------------------------------------------------------------------------- Simplified A a9:9:1:a:8:::61::a5::1 pos.-specific C ::1:1:::::4:1::9a:3975 probability G :::1:8:::2:::481::1::: matrix T ::9:9:9:a:6a9:::::1124 bits 2.0 * * 1.8 * ** 1.6 * ** ** * *** 1.4 ** ** *** ** *** * Relative 1.2 ********* ** **** * Entropy 1.0 ****************** ** (29.5 bits) 0.8 ****************** ** 0.6 ****************** ** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel AATATGTATATTTAGCCAACCC consensus C G C TT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATATGTATAYTTRGCCAMCCY MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr9:108777108-108777608 + 14 5.41e-13 taacctgttg aatatgtatacttagccaacct gttcagtgta chr8:33648777-33649277 - 75 7.28e-13 GTTG AATATGTATACTTGGCCAACCC CTTCAGCATA chr14:103269850-10327035 + 13 9.30e-13 aagcttattg aatatgtatatttggccaccct ggtcaatata chr10:25974795-25975295 - 78 1.93e-12 G AATATGTATACTTAGCCAACTC ATTCAGCATA chr7:157889480-157889980 + 6 3.89e-12 tgctg aatatgtatacttagccaccca ctcagcataa chr14:39486443-39486943 - 60 5.69e-12 TAACTTATTA AATATGTATATTTGGCCATCCT GCTCAGCAAA chr1:21991522-21992022 - 70 6.43e-12 AACCTGTTG AATATGTATGTTTAGCCAACTC TTTCAGCTTC chr15:26724585-26725085 + 1 1.85e-11 . aatatgcatatttagccacccc agtctgcata chr19:29914883-29915383 - 59 8.79e-11 TATCTTATTA AATATGTATGTTCAGCCATCCC GCTCAGCATA chr12:29530407-29530907 + 3 1.14e-10 tg aacatgtatacttaggcaaccc gttcagcata chr8:19537288-19537788 + 1 2.40e-10 . aatatgtacatttgaccacccc actcagcata chr1:34637039-34637539 - 63 2.40e-10 TAACCCACTA AATGTGTATACTTATCCAACCC ATTTTGCATA chr16:74283713-74284213 + 5 3.41e-10 gttg aatatggatatttaaccaacca attcagcata chr5:168477347-168477847 + 8 4.00e-10 cttatta aatatatatatttggccacctg ctcagcacac chr2:129870962-129871462 + 1 4.37e-10 . aatatgtatgttcagccaaact gttcagcaca chr5:160501318-160501818 - 65 7.77e-10 TAGCTTATTG AATATGTATATTCGACCACTCT GCTCAGCATA chr4:6526013-6526513 + 30 1.42e-09 tagcctgttg aatacatatacttagctaaccc gttcatcata chr19:28955958-28956458 - 44 2.52e-09 TAGCTTGTTA AATACTTATGTTTAGCCAGCCT GTTGAGCCTA chr3:9361822-9362322 + 5 2.52e-09 attt aacatgtatatttggccactgt gtttagcata chr2:190301981-190302481 - 74 3.57e-09 TGTTG AATATGTTTATGTAGCCAGCCA GTTCAGCATA chr2:69646919-69647419 + 2 6.81e-09 a agtgtgtattcttagccaactc atttggcata chrUn_KI270467v1:1910-24 + 50 2.78e-08 tgtacagtat ataatatatatttgggcaactt taatatatta -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATATGTATAYTTRGCCAMCCY MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:108777108-108777608 5.4e-13 13_[+6]_65 chr8:33648777-33649277 7.3e-13 74_[-6]_4 chr14:103269850-10327035 9.3e-13 12_[+6]_66 chr10:25974795-25975295 1.9e-12 77_[-6]_1 chr7:157889480-157889980 3.9e-12 5_[+6]_73 chr14:39486443-39486943 5.7e-12 59_[-6]_19 chr1:21991522-21992022 6.4e-12 69_[-6]_9 chr15:26724585-26725085 1.8e-11 [+6]_78 chr19:29914883-29915383 8.8e-11 58_[-6]_20 chr12:29530407-29530907 1.1e-10 2_[+6]_76 chr8:19537288-19537788 2.4e-10 [+6]_78 chr1:34637039-34637539 2.4e-10 62_[-6]_16 chr16:74283713-74284213 3.4e-10 4_[+6]_74 chr5:168477347-168477847 4e-10 7_[+6]_71 chr2:129870962-129871462 4.4e-10 [+6]_78 chr5:160501318-160501818 7.8e-10 64_[-6]_14 chr4:6526013-6526513 1.4e-09 29_[+6]_49 chr19:28955958-28956458 2.5e-09 43_[-6]_35 chr3:9361822-9362322 2.5e-09 4_[+6]_74 chr2:190301981-190302481 3.6e-09 73_[-6]_5 chr2:69646919-69647419 6.8e-09 1_[+6]_77 chrUn_KI270467v1:1910-24 2.8e-08 49_[+6]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATATGTATAYTTRGCCAMCCY MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AATATGTATAYTTRGCCAMCCY width=22 seqs=22 chr9:108777108-108777608 ( 14) AATATGTATACTTAGCCAACCT 1 chr8:33648777-33649277 ( 75) AATATGTATACTTGGCCAACCC 1 chr14:103269850-10327035 ( 13) AATATGTATATTTGGCCACCCT 1 chr10:25974795-25975295 ( 78) AATATGTATACTTAGCCAACTC 1 chr7:157889480-157889980 ( 6) AATATGTATACTTAGCCACCCA 1 chr14:39486443-39486943 ( 60) AATATGTATATTTGGCCATCCT 1 chr1:21991522-21992022 ( 70) AATATGTATGTTTAGCCAACTC 1 chr15:26724585-26725085 ( 1) AATATGCATATTTAGCCACCCC 1 chr19:29914883-29915383 ( 59) AATATGTATGTTCAGCCATCCC 1 chr12:29530407-29530907 ( 3) AACATGTATACTTAGGCAACCC 1 chr8:19537288-19537788 ( 1) AATATGTACATTTGACCACCCC 1 chr1:34637039-34637539 ( 63) AATGTGTATACTTATCCAACCC 1 chr16:74283713-74284213 ( 5) AATATGGATATTTAACCAACCA 1 chr5:168477347-168477847 ( 8) AATATATATATTTGGCCACCTG 1 chr2:129870962-129871462 ( 1) AATATGTATGTTCAGCCAAACT 1 chr5:160501318-160501818 ( 65) AATATGTATATTCGACCACTCT 1 chr4:6526013-6526513 ( 30) AATACATATACTTAGCTAACCC 1 chr19:28955958-28956458 ( 44) AATACTTATGTTTAGCCAGCCT 1 chr3:9361822-9362322 ( 5) AACATGTATATTTGGCCACTGT 1 chr2:190301981-190302481 ( 74) AATATGTTTATGTAGCCAGCCA 1 chr2:69646919-69647419 ( 2) AGTGTGTATTCTTAGCCAACTC 1 chrUn_KI270467v1:1910-24 ( 50) ATAATATATATTTGGGCAACTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATATGTATAYTTRGCCAMCCY MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 11.4253 E= 5.4e-061 196 -1110 -1110 -1110 183 -1110 -242 -249 -249 -142 -1110 175 183 -1110 -142 -1110 -1110 -142 -1110 183 -91 -1110 175 -249 -1110 -242 -242 183 190 -1110 -1110 -249 -1110 -242 -1110 190 159 -1110 -42 -249 -1110 58 -1110 131 -1110 -1110 -242 190 -1110 -84 -1110 175 131 -1110 58 -1110 -91 -1110 175 -249 -1110 190 -142 -1110 -1110 197 -1110 -249 196 -1110 -1110 -1110 96 38 -142 -149 -249 182 -1110 -149 -1110 158 -242 -17 -91 90 -242 51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATATGTATAYTTRGCCAMCCY MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 22 E= 5.4e-061 1.000000 0.000000 0.000000 0.000000 0.909091 0.000000 0.045455 0.045455 0.045455 0.090909 0.000000 0.863636 0.909091 0.000000 0.090909 0.000000 0.000000 0.090909 0.000000 0.909091 0.136364 0.000000 0.818182 0.045455 0.000000 0.045455 0.045455 0.909091 0.954545 0.000000 0.000000 0.045455 0.000000 0.045455 0.000000 0.954545 0.772727 0.000000 0.181818 0.045455 0.000000 0.363636 0.000000 0.636364 0.000000 0.000000 0.045455 0.954545 0.000000 0.136364 0.000000 0.863636 0.636364 0.000000 0.363636 0.000000 0.136364 0.000000 0.818182 0.045455 0.000000 0.909091 0.090909 0.000000 0.000000 0.954545 0.000000 0.045455 1.000000 0.000000 0.000000 0.000000 0.500000 0.318182 0.090909 0.090909 0.045455 0.863636 0.000000 0.090909 0.000000 0.727273 0.045455 0.227273 0.136364 0.454545 0.045455 0.363636 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AATATGTATAYTTRGCCAMCCY MEME-6 regular expression -------------------------------------------------------------------------------- AATATGTATA[TC]TT[AG]GCCA[AC]C[CT][CT] -------------------------------------------------------------------------------- Time 2705.11 secs. ******************************************************************************** ******************************************************************************** MOTIF SGSYBCSMSCBCCGSCSCSGCC MEME-7 width = 22 sites = 69 llr = 764 E-value = 6.4e-030 ******************************************************************************** -------------------------------------------------------------------------------- Motif SGSYBCSMSCBCCGSCSCSGCC MEME-7 Description -------------------------------------------------------------------------------- Simplified A :::1:::4111::2:1::1::: pos.-specific C 5236383335498166484168 probability G 466:316242312732624831 matrix T 11143:11123:::::::2111 bits 2.0 1.8 1.6 1.4 ** Relative 1.2 * ** * Entropy 1.0 * ** * * * (16.0 bits) 0.8 ** * **** ** *** 0.6 **** ** ******* *** 0.4 **** ** ******* *** 0.2 ********************** 0.0 ---------------------- Multilevel CGGCGCGAGCCCCGCCGCCGCC consensus GCCTC CCCGT GGC G G sequence T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGSYBCSMSCBCCGSCSCSGCC MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr10:98446804-98447304 + 4 2.51e-10 CGC GGGTTCGAGCCCCGCCCCTGCC AGGCCTTGCC chr9:128787016-128787516 - 61 3.54e-09 CTGCCGCCTG CGCTGCCGCCGCCGCCGCCGCC CCCCAGGGAC chr11:65919105-65919605 - 72 5.05e-09 GTCCTGG TGCCGCCCGCTCCGCCCCCGCC GTTTCCCGCG chr21:44939694-44940194 - 54 2.56e-08 GAGCCGCGGC TGCCGGGAGCCCCGCGGCCGCC GGAAGTACCC chr19:44212433-44212933 - 53 4.00e-08 CCGCCCTCGG CCTCTCGGCCTCCGCCGCGGCC GCGACCTCTC chr1:146035507-146036007 + 11 4.00e-08 ggttaggatt cggcgctctcaccgccgcggcc cgggttcgat chr2:113583785-113584285 - 65 4.63e-08 TGGGTCCTAG CCCCGCCACCTCCGCCCGCGCC TCCGGGTCCT chr11:3057158-3057658 - 69 5.34e-08 GCCCGGCGTG GGGCGCGACTTCCGGGGCGGCG GTTGCATCAG chr19:38849517-38850017 + 12 6.15e-08 gccgccccgg ctcctccaccgccaccgccgcc gcctccgtgc chr19:17334548-17335048 + 27 7.08e-08 AGGAGACAAA GGCCGCGCCCGCCCGCGCCGGC CTCGGTCCTC chr6:28943381-28943881 - 42 9.31e-08 TCGGGGGCGT GGGTTCGAATCCCACCGCTGCC AGTGTGAGGT chr16:22296930-22297430 + 69 9.31e-08 tcgggggcgt gggttcgaatcccaccgctgcc aGGGTTGCTG chr17:8120075-8120575 - 40 9.31e-08 TCGGAGGCGT GGGTTCGAATCCCACCGCTGCC AGGCTGGAGT chr19:43619301-43619801 - 58 1.22e-07 GCCGCAGAGC CGGAGCGGGGGCCGCCGGCGCC GGTGAGTGTC chr15:73992119-73992619 - 16 1.39e-07 CCTCCTCTTC CTGCGCCCGCGCCGCCGCGGGT GGCCGCGCGG chr19:43754376-43754876 + 25 1.80e-07 CCTGCCGGAG CGCCCCGCCCGCCGCCGGTGCG CTAGCCTCGC chr19:33777985-33778485 + 79 2.04e-07 TCTGGCCGCG CGGCTCCAGCTCCCGGGCGCCC chr5:96934981-96935481 + 44 2.04e-07 ACATCCTGCG GCGCCCGCGACCCGGGCCGGGC GATCCGGCGC chr19:37370986-37371486 - 50 3.36e-07 CCTTGACTTC CCGCTCCCGCCCGGGGCCCGGC CCCACTCACC chr19:58380517-58381017 - 56 4.27e-07 TCCGGTCCTC GCGCTCCGGGTCCGGACCGGCC ACACAGCACT chr17:45371583-45372083 + 45 5.40e-07 GGCCGCATTC CTGCGCGCTGCCCGCGGCCGTC CGGGTGACTC chr1:206612239-206612739 + 69 6.06e-07 TGGCCGTTGC CGCTGGGGAGGCCGCGGCCGCC CCCAGTGGCG chr19:45078994-45079494 - 45 9.51e-07 CGGCTACTGG TGTCCCCACTTCCGCCGGCGCC CCCGCTGCAG chr17:59619575-59620075 - 24 9.51e-07 TACCCCTCCA CGGAGCGCCGCGCGCGGCGGGC GCAGGAATTC chr6:143450495-143450995 - 18 1.06e-06 CCCGGAAACG GGGTCCCGGGCCCGCCGCGTTC CGCTGCCCGC chr19:33176888-33177388 + 20 1.18e-06 aggagatcct gggttcgaatcccagcggtgcc tcAACCGAGC chr19:34134446-34134946 + 57 1.47e-06 CCAGTCTTCC CGGCCCCTGCCCCGGACCCTCC TGCGCGCCCC chr20:1466687-1467187 + 57 1.63e-06 GCTGGGAGCC CGCCCGCAGCCCCGCCCCACGC GGTGCCTCAC chr12:116819209-11681970 - 20 1.63e-06 ATGATCTCAT GGCCCCGCGGGACGGCGCCGGC CGATGAGGTC chr5:96935784-96936284 - 35 1.63e-06 GCCAGGGAGG TGCCGCGAGGGGCGGCGCCGCT CCGCCGTTCC chrX:73944024-73944524 + 68 2.01e-06 GGGCCTGTTT GGCTGTGACGCCCACCCCCGGC TTTCATCCGC chr10:17201428-17201928 + 9 2.01e-06 CTCCATCC CCGCGCCTCAGCCGCCGCAGCC CCGGAGCTAG chr6:28789563-28790063 - 8 2.72e-06 ATGAGGTCCC GGGTTCGATCCCCGGCACCTCC AAACGGT chr17:8187397-8187897 + 47 2.72e-06 ccaaggtcgc gggttcgatccccgtacgggcc aGGATTGAAA chr19:13880066-13880566 - 8 3.01e-06 TGACGTCTCT GGCTCCGCCGGGCGGCCCCGCT GGGACCC chr12:103956933-10395743 - 45 3.32e-06 TGGGTCCGGC CTGCTCGCCGTCCGCTCCGTCC GCCCTTAGAC chr5:138337320-138337820 - 28 3.66e-06 TTCACTCCCT CTCTTCTCTCTCCGCCCCCTCC CCCCCAGCAG chr14:90396711-90397211 + 46 3.66e-06 GCCGCTCTGC GCGAGGCGGCTCCGCCGCGGCG GAGGGATACG chr19:36139781-36140281 + 19 4.04e-06 ATGTCCGCTT CGGCTCTAGGACCGCGCGGGCG ACAGCAGGGC chr8:33472964-33473464 - 14 4.45e-06 CGCCGGAACG CGCCCCGAGCTCGCCCGCGCGG CCGCCTCTTC chr5:14264532-14265032 - 53 4.45e-06 AGGGAGGTGA CGTCACCCTCTCCGGGCCGGCC ACTTCTCTGC chr19:40284974-40285474 + 39 4.89e-06 CTCTCCGGCG GGGCTCTACCCCCGCCCATCGC CACGCTGCGC chr5:139517798-139518298 - 32 4.89e-06 GCCGGAGGCA TGCCGGGAACTGCGCCGCCGCG GCAGTCTTCA chr5:140718716-140719216 + 63 5.37e-06 CCTCTCTGGG TGGTTCGAGACCCGCGGGTGCT TTCCAGCTCT chr19:34481381-34481881 + 28 5.90e-06 CTCCGAGGTC CCGGCGCAGCGCGGCCGCCGCC ACTCCCCCCA chr10:6088659-6089159 - 40 7.09e-06 GAGGACCGCA CTGCACGCTCCCCTCCGCCGGC GTCTTCTTAC chr22:41446546-41447046 + 24 7.77e-06 GCCAACAACC CGCACCTTCCCGCGCCCCGGCC CGAAGTGAGC chr1:36464183-36464683 - 69 8.50e-06 CGGGAACCCG GTCTCTGAGCTCCGCCCCGTGC GTTGCGTCAT chr5:140711061-140711561 + 78 9.29e-06 CCTGTCTGGG TTGTTCGAGACCCGCGGGCGCT C chr1:1375033-1375533 - 29 1.01e-05 CAGAATCGGG GGCCGCGAGGACGCCAGCGGGC GCTGTGCGTA chr17:46267007-46267507 + 18 1.01e-05 CGAGATCCCA GGGCGCCCGACCCATGCGGGCC GTTTCGCTGT chr10:104338415-10433891 - 73 1.11e-05 TTAAGG GCGTCCTCCCCGCGCCCCTGTC CACTCGCTCC chr15:64460305-64460805 + 77 1.21e-05 GACTCTGGTT GTCCCGGATCGCGGCGGCGGCG GC chr12:75330148-75330648 - 58 1.21e-05 TACACAACAA CCGCCGTGGATCCGGGCCGGGC TTTGGCCCTT chr17:30708659-30709159 + 56 1.21e-05 AAGCGGGTTG CGGCGGCCAGTCCCGGGCGGCG ACTCCGGGCC chr1:26695382-26695882 + 65 1.32e-05 GGGAGCGAGT CCGTTCCACGGCCTGCGCCCGC TCCGCTCTCC chr19:39341771-39342271 - 72 1.56e-05 CAGGCTC GCGCGCGTCCACCCCAGCTGCC CCGAGCGAAG chr19:36054821-36055321 + 15 1.70e-05 CCCTCTGTCA TGGCGGGAGTTCCGGCGCGGAG GGGCCAGTCC chr10:101060877-10106137 + 78 1.84e-05 CTTCTGTGAG CCGCTTGGGGCCGGCCGGGGCG G chr15:65610890-65611390 + 66 2.00e-05 CATAAACTTT CCGTCCGCGCGCCACAGCCGGA ACTATAAGGC chr1:109483987-109484487 + 29 2.35e-05 AGGACCCGCC GGGTCCTAGTGCCCGCCCGCTC CGTCACCTTC chr20:58650882-58651382 - 55 2.35e-05 TTGCTCGCAA CGTTCCGGGCGCGGGAGCTCCC TGCACTCCTG chr12:56630147-56630647 + 23 2.76e-05 CCGGGAGAGA GTCTCCCCACGCGGCCTCCGCC ACAGGGTCCT chr6:131628077-131628577 - 43 2.99e-05 GGGGGCGCTC TCGTCCGGCTTGCGGGCCGCCC TTCTCCACAG chr1:146036856-146037356 + 54 3.23e-05 cagttgaccc gggttcgattcccggccaacgc aGTGTCAGTT chr1:161530926-161531426 + 36 3.23e-05 cagttgaccc gggttcgattcccggccaacgc aAGGGTTTTT chr1:228165570-228166070 - 71 3.77e-05 GACCGGGC CGCCGCGCCCCGGAGTGGCGCC TCGAAGCAGC chr13:44917677-44918177 - 57 4.07e-05 TTCACCCAGG CGGCCCGGGTTCGACTCCCGGT GTGGGAACGC chr19:4724397-4724897 - 45 7.29e-05 ACACGCGAAA GGTCCCCGGTTCGATCCCGGGC GGAAACAGGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGSYBCSMSCBCCGSCSCSGCC MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:98446804-98447304 2.5e-10 3_[+7]_75 chr9:128787016-128787516 3.5e-09 60_[-7]_18 chr11:65919105-65919605 5e-09 71_[-7]_7 chr21:44939694-44940194 2.6e-08 53_[-7]_25 chr19:44212433-44212933 4e-08 52_[-7]_26 chr1:146035507-146036007 4e-08 10_[+7]_68 chr2:113583785-113584285 4.6e-08 64_[-7]_14 chr11:3057158-3057658 5.3e-08 68_[-7]_10 chr19:38849517-38850017 6.2e-08 11_[+7]_67 chr19:17334548-17335048 7.1e-08 26_[+7]_52 chr6:28943381-28943881 9.3e-08 41_[-7]_37 chr16:22296930-22297430 9.3e-08 68_[+7]_10 chr17:8120075-8120575 9.3e-08 39_[-7]_39 chr19:43619301-43619801 1.2e-07 57_[-7]_21 chr15:73992119-73992619 1.4e-07 15_[-7]_63 chr19:43754376-43754876 1.8e-07 24_[+7]_54 chr19:33777985-33778485 2e-07 78_[+7] chr5:96934981-96935481 2e-07 43_[+7]_35 chr19:37370986-37371486 3.4e-07 49_[-7]_29 chr19:58380517-58381017 4.3e-07 55_[-7]_23 chr17:45371583-45372083 5.4e-07 44_[+7]_34 chr1:206612239-206612739 6.1e-07 68_[+7]_10 chr19:45078994-45079494 9.5e-07 44_[-7]_34 chr17:59619575-59620075 9.5e-07 23_[-7]_55 chr6:143450495-143450995 1.1e-06 17_[-7]_61 chr19:33176888-33177388 1.2e-06 19_[+7]_59 chr19:34134446-34134946 1.5e-06 56_[+7]_22 chr20:1466687-1467187 1.6e-06 56_[+7]_22 chr12:116819209-11681970 1.6e-06 19_[-7]_59 chr5:96935784-96936284 1.6e-06 34_[-7]_44 chrX:73944024-73944524 2e-06 67_[+7]_11 chr10:17201428-17201928 2e-06 8_[+7]_70 chr6:28789563-28790063 2.7e-06 7_[-7]_71 chr17:8187397-8187897 2.7e-06 46_[+7]_32 chr19:13880066-13880566 3e-06 7_[-7]_71 chr12:103956933-10395743 3.3e-06 44_[-7]_34 chr5:138337320-138337820 3.7e-06 27_[-7]_51 chr14:90396711-90397211 3.7e-06 45_[+7]_33 chr19:36139781-36140281 4e-06 18_[+7]_60 chr8:33472964-33473464 4.4e-06 13_[-7]_65 chr5:14264532-14265032 4.4e-06 52_[-7]_26 chr19:40284974-40285474 4.9e-06 38_[+7]_40 chr5:139517798-139518298 4.9e-06 31_[-7]_47 chr5:140718716-140719216 5.4e-06 62_[+7]_16 chr19:34481381-34481881 5.9e-06 27_[+7]_51 chr10:6088659-6089159 7.1e-06 39_[-7]_39 chr22:41446546-41447046 7.8e-06 23_[+7]_55 chr1:36464183-36464683 8.5e-06 68_[-7]_10 chr5:140711061-140711561 9.3e-06 77_[+7]_1 chr1:1375033-1375533 1e-05 28_[-7]_50 chr17:46267007-46267507 1e-05 17_[+7]_61 chr10:104338415-10433891 1.1e-05 72_[-7]_6 chr15:64460305-64460805 1.2e-05 76_[+7]_2 chr12:75330148-75330648 1.2e-05 57_[-7]_21 chr17:30708659-30709159 1.2e-05 55_[+7]_23 chr1:26695382-26695882 1.3e-05 64_[+7]_14 chr19:39341771-39342271 1.6e-05 71_[-7]_7 chr19:36054821-36055321 1.7e-05 14_[+7]_64 chr10:101060877-10106137 1.8e-05 77_[+7]_1 chr15:65610890-65611390 2e-05 65_[+7]_13 chr1:109483987-109484487 2.4e-05 28_[+7]_50 chr20:58650882-58651382 2.4e-05 54_[-7]_24 chr12:56630147-56630647 2.8e-05 22_[+7]_56 chr6:131628077-131628577 3e-05 42_[-7]_36 chr1:146036856-146037356 3.2e-05 53_[+7]_25 chr1:161530926-161531426 3.2e-05 35_[+7]_43 chr1:228165570-228166070 3.8e-05 70_[-7]_8 chr13:44917677-44918177 4.1e-05 56_[-7]_22 chr19:4724397-4724897 7.3e-05 44_[-7]_34 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGSYBCSMSCBCCGSCSCSGCC MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF SGSYBCSMSCBCCGSCSCSGCC width=22 seqs=69 chr10:98446804-98447304 ( 4) GGGTTCGAGCCCCGCCCCTGCC 1 chr9:128787016-128787516 ( 61) CGCTGCCGCCGCCGCCGCCGCC 1 chr11:65919105-65919605 ( 72) TGCCGCCCGCTCCGCCCCCGCC 1 chr21:44939694-44940194 ( 54) TGCCGGGAGCCCCGCGGCCGCC 1 chr19:44212433-44212933 ( 53) CCTCTCGGCCTCCGCCGCGGCC 1 chr1:146035507-146036007 ( 11) CGGCGCTCTCACCGCCGCGGCC 1 chr2:113583785-113584285 ( 65) CCCCGCCACCTCCGCCCGCGCC 1 chr11:3057158-3057658 ( 69) GGGCGCGACTTCCGGGGCGGCG 1 chr19:38849517-38850017 ( 12) CTCCTCCACCGCCACCGCCGCC 1 chr19:17334548-17335048 ( 27) GGCCGCGCCCGCCCGCGCCGGC 1 chr6:28943381-28943881 ( 42) GGGTTCGAATCCCACCGCTGCC 1 chr16:22296930-22297430 ( 69) GGGTTCGAATCCCACCGCTGCC 1 chr17:8120075-8120575 ( 40) GGGTTCGAATCCCACCGCTGCC 1 chr19:43619301-43619801 ( 58) CGGAGCGGGGGCCGCCGGCGCC 1 chr15:73992119-73992619 ( 16) CTGCGCCCGCGCCGCCGCGGGT 1 chr19:43754376-43754876 ( 25) CGCCCCGCCCGCCGCCGGTGCG 1 chr19:33777985-33778485 ( 79) CGGCTCCAGCTCCCGGGCGCCC 1 chr5:96934981-96935481 ( 44) GCGCCCGCGACCCGGGCCGGGC 1 chr19:37370986-37371486 ( 50) CCGCTCCCGCCCGGGGCCCGGC 1 chr19:58380517-58381017 ( 56) GCGCTCCGGGTCCGGACCGGCC 1 chr17:45371583-45372083 ( 45) CTGCGCGCTGCCCGCGGCCGTC 1 chr1:206612239-206612739 ( 69) CGCTGGGGAGGCCGCGGCCGCC 1 chr19:45078994-45079494 ( 45) TGTCCCCACTTCCGCCGGCGCC 1 chr17:59619575-59620075 ( 24) CGGAGCGCCGCGCGCGGCGGGC 1 chr6:143450495-143450995 ( 18) GGGTCCCGGGCCCGCCGCGTTC 1 chr19:33176888-33177388 ( 20) GGGTTCGAATCCCAGCGGTGCC 1 chr19:34134446-34134946 ( 57) CGGCCCCTGCCCCGGACCCTCC 1 chr20:1466687-1467187 ( 57) CGCCCGCAGCCCCGCCCCACGC 1 chr12:116819209-11681970 ( 20) GGCCCCGCGGGACGGCGCCGGC 1 chr5:96935784-96936284 ( 35) TGCCGCGAGGGGCGGCGCCGCT 1 chrX:73944024-73944524 ( 68) GGCTGTGACGCCCACCCCCGGC 1 chr10:17201428-17201928 ( 9) CCGCGCCTCAGCCGCCGCAGCC 1 chr6:28789563-28790063 ( 8) GGGTTCGATCCCCGGCACCTCC 1 chr17:8187397-8187897 ( 47) GGGTTCGATCCCCGTACGGGCC 1 chr19:13880066-13880566 ( 8) GGCTCCGCCGGGCGGCCCCGCT 1 chr12:103956933-10395743 ( 45) CTGCTCGCCGTCCGCTCCGTCC 1 chr5:138337320-138337820 ( 28) CTCTTCTCTCTCCGCCCCCTCC 1 chr14:90396711-90397211 ( 46) GCGAGGCGGCTCCGCCGCGGCG 1 chr19:36139781-36140281 ( 19) CGGCTCTAGGACCGCGCGGGCG 1 chr8:33472964-33473464 ( 14) CGCCCCGAGCTCGCCCGCGCGG 1 chr5:14264532-14265032 ( 53) CGTCACCCTCTCCGGGCCGGCC 1 chr19:40284974-40285474 ( 39) GGGCTCTACCCCCGCCCATCGC 1 chr5:139517798-139518298 ( 32) TGCCGGGAACTGCGCCGCCGCG 1 chr5:140718716-140719216 ( 63) TGGTTCGAGACCCGCGGGTGCT 1 chr19:34481381-34481881 ( 28) CCGGCGCAGCGCGGCCGCCGCC 1 chr10:6088659-6089159 ( 40) CTGCACGCTCCCCTCCGCCGGC 1 chr22:41446546-41447046 ( 24) CGCACCTTCCCGCGCCCCGGCC 1 chr1:36464183-36464683 ( 69) GTCTCTGAGCTCCGCCCCGTGC 1 chr5:140711061-140711561 ( 78) TTGTTCGAGACCCGCGGGCGCT 1 chr1:1375033-1375533 ( 29) GGCCGCGAGGACGCCAGCGGGC 1 chr17:46267007-46267507 ( 18) GGGCGCCCGACCCATGCGGGCC 1 chr10:104338415-10433891 ( 73) GCGTCCTCCCCGCGCCCCTGTC 1 chr15:64460305-64460805 ( 77) GTCCCGGATCGCGGCGGCGGCG 1 chr12:75330148-75330648 ( 58) CCGCCGTGGATCCGGGCCGGGC 1 chr17:30708659-30709159 ( 56) CGGCGGCCAGTCCCGGGCGGCG 1 chr1:26695382-26695882 ( 65) CCGTTCCACGGCCTGCGCCCGC 1 chr19:39341771-39342271 ( 72) GCGCGCGTCCACCCCAGCTGCC 1 chr19:36054821-36055321 ( 15) TGGCGGGAGTTCCGGCGCGGAG 1 chr10:101060877-10106137 ( 78) CCGCTTGGGGCCGGCCGGGGCG 1 chr15:65610890-65611390 ( 66) CCGTCCGCGCGCCACAGCCGGA 1 chr1:109483987-109484487 ( 29) GGGTCCTAGTGCCCGCCCGCTC 1 chr20:58650882-58651382 ( 55) CGTTCCGGGCGCGGGAGCTCCC 1 chr12:56630147-56630647 ( 23) GTCTCCCCACGCGGCCTCCGCC 1 chr6:131628077-131628577 ( 43) TCGTCCGGCTTGCGGGCCGCCC 1 chr1:146036856-146037356 ( 54) GGGTTCGATTCCCGGCCAACGC 1 chr1:161530926-161531426 ( 36) GGGTTCGATTCCCGGCCAACGC 1 chr1:228165570-228166070 ( 71) CGCCGCGCCCCGGAGTGGCGCC 1 chr13:44917677-44918177 ( 57) CGGCCCGGGTTCGACTCCCGGT 1 chr19:4724397-4724897 ( 45) GGTCCCCGGTTCGATCCCGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGSYBCSMSCBCCGSCSCSGCC MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47321 bayes= 11.4422 E= 6.4e-030 -1275 93 73 -97 -1275 -17 139 -82 -1275 39 132 -182 -214 121 -407 50 -314 39 45 32 -1275 173 -75 -256 -1275 32 125 -114 81 32 -37 -214 -114 25 88 -82 -156 102 -7 -44 -214 68 10 18 -414 183 -107 -1275 -1275 179 -61 -1275 -68 -126 154 -314 -1275 135 45 -256 -134 132 2 -256 -414 68 125 -414 -256 168 -49 -1275 -214 68 68 -68 -1275 -75 166 -156 -414 139 25 -214 -414 163 -75 -156 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGSYBCSMSCBCCGSCSCSGCC MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 69 E= 6.4e-030 0.000000 0.463768 0.405797 0.130435 0.000000 0.217391 0.637681 0.144928 0.000000 0.318841 0.608696 0.072464 0.057971 0.565217 0.014493 0.362319 0.028986 0.318841 0.333333 0.318841 0.000000 0.811594 0.144928 0.043478 0.000000 0.304348 0.579710 0.115942 0.449275 0.304348 0.188406 0.057971 0.115942 0.289855 0.449275 0.144928 0.086957 0.492754 0.231884 0.188406 0.057971 0.391304 0.260870 0.289855 0.014493 0.869565 0.115942 0.000000 0.000000 0.840580 0.159420 0.000000 0.159420 0.101449 0.710145 0.028986 0.000000 0.623188 0.333333 0.043478 0.101449 0.608696 0.246377 0.043478 0.014493 0.391304 0.579710 0.014493 0.043478 0.782609 0.173913 0.000000 0.057971 0.391304 0.391304 0.159420 0.000000 0.144928 0.768116 0.086957 0.014493 0.637681 0.289855 0.057971 0.014493 0.753623 0.144928 0.086957 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif SGSYBCSMSCBCCGSCSCSGCC MEME-7 regular expression -------------------------------------------------------------------------------- [CG][GC][GC][CT][GCT]C[GC][AC][GC][CG][CTG]CCG[CG][CG][GC]C[CG]G[CG]C -------------------------------------------------------------------------------- Time 3105.58 secs. ******************************************************************************** ******************************************************************************** MOTIF CAGAGGCTACRCTTCC MEME-8 width = 16 sites = 15 llr = 261 E-value = 6.8e-020 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAGAGGCTACRCTTCC MEME-8 Description -------------------------------------------------------------------------------- Simplified A 171a:3::9:6::::: pos.-specific C 81::::a1:719::aa probability G 119:a7::1:3::::: matrix T :1:::1:9:3:1aa:: bits 2.0 ** * **** 1.8 ** * **** 1.6 *** ** ***** 1.4 *** *** ***** Relative 1.2 * *** **** ***** Entropy 1.0 * *** **** ***** (25.1 bits) 0.8 **************** 0.6 **************** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel CAGAGGCTACACTTCC consensus A TG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGGCTACRCTTCC MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr10:101163898-10116439 - 4 2.21e-10 GGCTTCTGGC CAGAGGCTACACTTCC CAG chr1:116732361-116732861 - 17 2.21e-10 GGCTTCTGGC CAGAGGCTACACTTCC AGCCTGTCAG chr19:29295261-29295761 + 83 4.31e-10 ggcttctcat cagaggctacgcttcc ca chr8:74099487-74099987 + 84 6.63e-10 ggcttctgac cagagactacacttcc c chr5:10304230-10304730 + 81 6.63e-10 agcttctggc cagagactacacttcc cagc chr2:69646919-69647419 + 85 3.29e-09 cagtctctgc cagagtctacacttcc chr10:25974795-25975295 - 1 4.60e-09 TGGCTTCTAC CAGAGGCCACACTTCC chr6:101860076-101860576 - 6 4.60e-09 GGCTTCCAAC CAGAGACTATGCTTCC CAACC chr8:19537288-19537788 + 84 7.27e-09 tggcttctgc cagagactacccttcc a chr15:26724585-26725085 + 84 1.03e-08 agcttctaat gggaggctacacttcc c chr13:110986520-11098702 + 83 1.85e-08 cagcttctga aagaggctatgcttcc ca chr9:135680816-135681316 - 6 1.98e-08 GGCTTCTGGC CTGAGGCTGCACTTCC CAGCC chr2:85721004-85721504 - 6 3.58e-08 AGCTTCTGAC CCAAGGCTACACTTCC CAGCT chr12:29530407-29530907 + 85 3.58e-08 tgctttctgc gggaggctatgcttcc chr2:190301981-190302481 - 4 7.44e-08 TGGCTTCTGC CAGAGGCTGTGTTTCC CAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGGCTACRCTTCC MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:101163898-10116439 2.2e-10 3_[-8]_81 chr1:116732361-116732861 2.2e-10 16_[-8]_68 chr19:29295261-29295761 4.3e-10 82_[+8]_2 chr8:74099487-74099987 6.6e-10 83_[+8]_1 chr5:10304230-10304730 6.6e-10 80_[+8]_4 chr2:69646919-69647419 3.3e-09 84_[+8] chr10:25974795-25975295 4.6e-09 [-8]_84 chr6:101860076-101860576 4.6e-09 5_[-8]_79 chr8:19537288-19537788 7.3e-09 83_[+8]_1 chr15:26724585-26725085 1e-08 83_[+8]_1 chr13:110986520-11098702 1.9e-08 82_[+8]_2 chr9:135680816-135681316 2e-08 5_[-8]_79 chr2:85721004-85721504 3.6e-08 5_[-8]_79 chr12:29530407-29530907 3.6e-08 84_[+8] chr2:190301981-190302481 7.4e-08 3_[-8]_81 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGGCTACRCTTCC MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAGAGGCTACRCTTCC width=16 seqs=15 chr10:101163898-10116439 ( 4) CAGAGGCTACACTTCC 1 chr1:116732361-116732861 ( 17) CAGAGGCTACACTTCC 1 chr19:29295261-29295761 ( 83) CAGAGGCTACGCTTCC 1 chr8:74099487-74099987 ( 84) CAGAGACTACACTTCC 1 chr5:10304230-10304730 ( 81) CAGAGACTACACTTCC 1 chr2:69646919-69647419 ( 85) CAGAGTCTACACTTCC 1 chr10:25974795-25975295 ( 1) CAGAGGCCACACTTCC 1 chr6:101860076-101860576 ( 6) CAGAGACTATGCTTCC 1 chr8:19537288-19537788 ( 84) CAGAGACTACCCTTCC 1 chr15:26724585-26725085 ( 84) GGGAGGCTACACTTCC 1 chr13:110986520-11098702 ( 83) AAGAGGCTATGCTTCC 1 chr9:135680816-135681316 ( 6) CTGAGGCTGCACTTCC 1 chr2:85721004-85721504 ( 6) CCAAGGCTACACTTCC 1 chr12:29530407-29530907 ( 85) GGGAGGCTATGCTTCC 1 chr2:190301981-190302481 ( 4) CAGAGGCTGTGTTTCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGGCTACRCTTCC MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 50915 bayes= 11.6535 E= 6.8e-020 -194 171 -87 -1055 152 -187 -87 -194 -194 -1055 194 -1055 196 -1055 -1055 -1055 -1055 -1055 204 -1055 6 -1055 145 -194 -1055 204 -1055 -1055 -1055 -187 -1055 186 176 -1055 -87 -1055 -1055 159 -1055 6 123 -187 45 -1055 -1055 194 -1055 -194 -1055 -1055 -1055 196 -1055 -1055 -1055 196 -1055 204 -1055 -1055 -1055 204 -1055 -1055 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGGCTACRCTTCC MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 15 E= 6.8e-020 0.066667 0.800000 0.133333 0.000000 0.733333 0.066667 0.133333 0.066667 0.066667 0.000000 0.933333 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.266667 0.000000 0.666667 0.066667 0.000000 1.000000 0.000000 0.000000 0.000000 0.066667 0.000000 0.933333 0.866667 0.000000 0.133333 0.000000 0.000000 0.733333 0.000000 0.266667 0.600000 0.066667 0.333333 0.000000 0.000000 0.933333 0.000000 0.066667 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAGAGGCTACRCTTCC MEME-8 regular expression -------------------------------------------------------------------------------- CAGAG[GA]CTA[CT][AG]CTTCC -------------------------------------------------------------------------------- Time 3472.56 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAGTCA MEME-9 width = 7 sites = 63 llr = 610 E-value = 7.6e-020 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAGTCA MEME-9 Description -------------------------------------------------------------------------------- Simplified A ::a:::a pos.-specific C :::::a: probability G :a:a::: matrix T a:::a:: bits 2.0 ******* 1.8 ******* 1.6 ******* 1.4 ******* Relative 1.2 ******* Entropy 1.0 ******* (14.0 bits) 0.8 ******* 0.6 ******* 0.4 ******* 0.2 ******* 0.0 ------- Multilevel TGAGTCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------- chr1:100036721-100037221 - 9 6.24e-05 TGCCACGGAG TGAGTCA CTTTGGAA chr10:87586160-87586660 + 29 6.24e-05 aatgtagcca tgagtca taagaccttc chr15:60374686-60375186 + 17 6.24e-05 CTGGGCTACG TGAGTCA CAGAAGAGCT chr1:109769203-109769703 + 69 6.24e-05 ggggcaggtg tgagtca gaagctcagc chr10:125973186-12597368 + 47 6.24e-05 CGTGAAGATG TGAGTCA TTGTGACATC chr13:110965217-11096571 - 12 6.24e-05 GGGTGGAGAA TGAGTCA GGATGGAGTA chr1:232704679-232705179 + 89 6.24e-05 TGGCTGCTAA TGAGTCA GCTGC chr12:45415277-45415777 + 69 6.24e-05 TAGGGTTGGG TGAGTCA TAGGGAAGTT chr8:630822-631322 - 42 6.24e-05 TGGGAGGGTA TGAGTCA GCTCTGTCAA chr17:13420831-13421331 + 37 6.24e-05 ttctgagaaa tgagtca ttagatgatt chr1:234700138-234700638 - 62 6.24e-05 ATAATGCCTC TGAGTCA TCCATTAACC chr13:110870173-11087067 - 27 6.24e-05 TGACCAGCGC TGAGTCA GTCTAGGAGC chr16:15590894-15591394 + 23 6.24e-05 cttgaaacag tgagtca gatcctgtta chr4:113435863-113436363 + 46 6.24e-05 CAGACGCGGA TGAGTCA TTGCTTTTGG chr5:174335917-174336417 + 63 6.24e-05 GCACTACCCT TGAGTCA TCCTAGCCCC chr20:50165942-50166442 - 58 6.24e-05 CAAGCACGCA TGAGTCA GAAGCAGTTA chr6:82260208-82260708 - 89 6.24e-05 GGATG TGAGTCA CACTGCACTT chr19:40715576-40716076 + 14 6.24e-05 TTCCCAGTGC TGAGTCA GGAACCTTGG chr10:18607459-18607959 - 29 6.24e-05 GATCTGCATC TGAGTCA CCAGCAGGGC chr8:16825906-16826406 + 86 6.24e-05 TTCAAATAGA TGAGTCA GTACTCCC chr17:40314515-40315015 + 72 6.24e-05 TCTCGGTAGG TGAGTCA CTGCCCTGGC chr17:73474231-73474731 - 42 6.24e-05 TGGCCAGTTG TGAGTCA GCCCTGCACA chr17:65228908-65229408 - 93 6.24e-05 A TGAGTCA GCAACCCCAG chr9:1458449-1458949 + 92 6.24e-05 CTTGAGGTGA TGAGTCA TA chr6:27633168-27633668 - 8 6.24e-05 AGCTGCTTGA TGAGTCA CAGGTTC chr17:1080673-1081173 + 81 6.24e-05 CGTCATCGAG TGAGTCA GGATGAGAAG chr19:40219816-40220316 + 27 6.24e-05 tgcctggctc tgagtca gcatccatat chr11:36149617-36150117 - 21 6.24e-05 AACACATTCA TGAGTCA TGAGGAACAG chr5:34923858-34924358 - 71 6.24e-05 TTCTCCTGAA TGAGTCA CTGTGTGACT chr10:89861899-89862399 - 9 6.24e-05 ATAAGTGGCA TGAGTCA TCCCAGCT chr1:225425273-225425773 + 54 6.24e-05 CAGGCCTGGC TGAGTCA CCCGAGGGGC chr1:228903016-228903516 + 12 6.24e-05 CCAATCCTCA TGAGTCA ACCAGAGAGC chr1:175470895-175471395 + 54 6.24e-05 AACTGTCTTA TGAGTCA CAAGACTGAA chr10:63707224-63707724 + 72 6.24e-05 CAGAAAGATG TGAGTCA GTTTAGTCCT chr1:67700642-67701142 + 64 6.24e-05 ATAGTGAATA TGAGTCA CCACCATCTA chr22:40711474-40711974 + 29 6.24e-05 tacagagaca tgagtca tcgagaggct chr20:62088361-62088861 - 94 6.24e-05 . TGAGTCA TGCATTGCCC chr13:42720381-42720881 + 12 6.24e-05 CGGGAGCTGA TGAGTCA CTGAGTGTGC chr16:9047726-9048226 + 19 6.24e-05 GAGGTCTGAA TGAGTCA GCATAGTGGG chr19:36139781-36140281 + 84 6.24e-05 AGTTGCGGCC TGAGTCA CCGGCCCCGC chr5:76790524-76791024 - 14 6.24e-05 ATTCATTTTC TGAGTCA TCTAGCCGAT chr4:72112473-72112973 + 12 6.24e-05 ATGACACTTG TGAGTCA TATGTCTCAT chr22:39748824-39749324 + 43 6.24e-05 tttgcagctt tgagtca taggctacat chr5:133240405-133240905 - 67 6.24e-05 CGCGAAGAGA TGAGTCA TGCGCTAAGA chr2:172253134-172253634 + 77 6.24e-05 cagacacacG TGAGTCA CCCCTACAGG chr12:80186624-80187124 - 67 6.24e-05 AAGGAAAAGA TGAGTCA TTCAGCATCA chr10:110512720-11051322 + 88 6.24e-05 CATCGGCGGG TGAGTCA CTGGAG chr16:4944727-4945227 + 40 6.24e-05 GGGTCTACGG TGAGTCA TGCTCTGCCT chr10:68153615-68154115 - 48 6.24e-05 GTATAGAAAG TGAGTCA CAGGGAATGG chr12:114914228-11491472 + 26 6.24e-05 TATGATCCAG TGAGTCA TATCGCTCCA chr16:15502263-15502763 - 28 6.24e-05 TTGCTTTTAA TGAGTCA CCGTTTCCCA chr6:111591367-111591867 + 52 6.24e-05 CTGATTTGTC TGAGTCA TGGCCAGTGT chr1:30058907-30059407 + 21 6.24e-05 tagagctggg tgagtca ccagggaata chr7:128523196-128523696 + 24 6.24e-05 gcagggattg tgagtca tcatcagctc chr17:3890061-3890561 - 77 6.24e-05 GTAGCTGTGC TGAGTCA GGCAACAGCC chr1:225508453-225508953 - 8 6.24e-05 AGCCAACTAG TGAGTCA CTGACTA chr13:100392659-10039315 - 37 6.24e-05 CTTCCCTGGG TGAGTCA CTCAACCTTC chr10:103908271-10390877 + 11 6.24e-05 AGGCCTGCGG TGAGTCA GGGGAAGCAG chr2:239257439-239257939 - 37 6.24e-05 GCCCTAGCAA TGAGTCA TCACTTCAGT chr10:75469021-75469521 + 79 6.24e-05 AAAGAAACAG TGAGTCA CTGGGGGAGC chr17:45371583-45372083 - 71 6.24e-05 GCCTGCACCG TGAGTCA CCCGGACGGC chr10:114623819-11462431 + 58 6.24e-05 CCTCTCGGTA TGAGTCA CCATCAGACA chr10:33134018-33134518 - 30 6.24e-05 ATGAGTGGGG TGAGTCA TCGCCCTCTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:100036721-100037221 6.2e-05 8_[-9]_85 chr10:87586160-87586660 6.2e-05 28_[+9]_65 chr15:60374686-60375186 6.2e-05 16_[+9]_77 chr1:109769203-109769703 6.2e-05 68_[+9]_25 chr10:125973186-12597368 6.2e-05 46_[+9]_47 chr13:110965217-11096571 6.2e-05 11_[-9]_82 chr1:232704679-232705179 6.2e-05 88_[+9]_5 chr12:45415277-45415777 6.2e-05 68_[+9]_25 chr8:630822-631322 6.2e-05 41_[-9]_52 chr17:13420831-13421331 6.2e-05 36_[+9]_57 chr1:234700138-234700638 6.2e-05 61_[-9]_32 chr13:110870173-11087067 6.2e-05 26_[-9]_67 chr16:15590894-15591394 6.2e-05 22_[+9]_71 chr4:113435863-113436363 6.2e-05 45_[+9]_48 chr5:174335917-174336417 6.2e-05 62_[+9]_31 chr20:50165942-50166442 6.2e-05 57_[-9]_36 chr6:82260208-82260708 6.2e-05 88_[-9]_5 chr19:40715576-40716076 6.2e-05 13_[+9]_80 chr10:18607459-18607959 6.2e-05 28_[-9]_65 chr8:16825906-16826406 6.2e-05 85_[+9]_8 chr17:40314515-40315015 6.2e-05 71_[+9]_22 chr17:73474231-73474731 6.2e-05 41_[-9]_52 chr17:65228908-65229408 6.2e-05 92_[-9]_1 chr9:1458449-1458949 6.2e-05 91_[+9]_2 chr6:27633168-27633668 6.2e-05 7_[-9]_86 chr17:1080673-1081173 6.2e-05 80_[+9]_13 chr19:40219816-40220316 6.2e-05 26_[+9]_67 chr11:36149617-36150117 6.2e-05 20_[-9]_73 chr5:34923858-34924358 6.2e-05 70_[-9]_23 chr10:89861899-89862399 6.2e-05 8_[-9]_85 chr1:225425273-225425773 6.2e-05 53_[+9]_40 chr1:228903016-228903516 6.2e-05 11_[+9]_82 chr1:175470895-175471395 6.2e-05 53_[+9]_40 chr10:63707224-63707724 6.2e-05 71_[+9]_22 chr1:67700642-67701142 6.2e-05 63_[+9]_30 chr22:40711474-40711974 6.2e-05 28_[+9]_65 chr20:62088361-62088861 6.2e-05 93_[-9] chr13:42720381-42720881 6.2e-05 11_[+9]_82 chr16:9047726-9048226 6.2e-05 18_[+9]_75 chr19:36139781-36140281 6.2e-05 83_[+9]_10 chr5:76790524-76791024 6.2e-05 13_[-9]_80 chr4:72112473-72112973 6.2e-05 11_[+9]_82 chr22:39748824-39749324 6.2e-05 42_[+9]_51 chr5:133240405-133240905 6.2e-05 66_[-9]_27 chr2:172253134-172253634 6.2e-05 76_[+9]_17 chr12:80186624-80187124 6.2e-05 66_[-9]_27 chr10:110512720-11051322 6.2e-05 87_[+9]_6 chr16:4944727-4945227 6.2e-05 39_[+9]_54 chr10:68153615-68154115 6.2e-05 47_[-9]_46 chr12:114914228-11491472 6.2e-05 25_[+9]_68 chr16:15502263-15502763 6.2e-05 27_[-9]_66 chr6:111591367-111591867 6.2e-05 51_[+9]_42 chr1:30058907-30059407 6.2e-05 20_[+9]_73 chr7:128523196-128523696 6.2e-05 23_[+9]_70 chr17:3890061-3890561 6.2e-05 76_[-9]_17 chr1:225508453-225508953 6.2e-05 7_[-9]_86 chr13:100392659-10039315 6.2e-05 36_[-9]_57 chr10:103908271-10390877 6.2e-05 10_[+9]_83 chr2:239257439-239257939 6.2e-05 36_[-9]_57 chr10:75469021-75469521 6.2e-05 78_[+9]_15 chr17:45371583-45372083 6.2e-05 70_[-9]_23 chr10:114623819-11462431 6.2e-05 57_[+9]_36 chr10:33134018-33134518 6.2e-05 29_[-9]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAGTCA width=7 seqs=63 chr1:100036721-100037221 ( 9) TGAGTCA 1 chr10:87586160-87586660 ( 29) TGAGTCA 1 chr15:60374686-60375186 ( 17) TGAGTCA 1 chr1:109769203-109769703 ( 69) TGAGTCA 1 chr10:125973186-12597368 ( 47) TGAGTCA 1 chr13:110965217-11096571 ( 12) TGAGTCA 1 chr1:232704679-232705179 ( 89) TGAGTCA 1 chr12:45415277-45415777 ( 69) TGAGTCA 1 chr8:630822-631322 ( 42) TGAGTCA 1 chr17:13420831-13421331 ( 37) TGAGTCA 1 chr1:234700138-234700638 ( 62) TGAGTCA 1 chr13:110870173-11087067 ( 27) TGAGTCA 1 chr16:15590894-15591394 ( 23) TGAGTCA 1 chr4:113435863-113436363 ( 46) TGAGTCA 1 chr5:174335917-174336417 ( 63) TGAGTCA 1 chr20:50165942-50166442 ( 58) TGAGTCA 1 chr6:82260208-82260708 ( 89) TGAGTCA 1 chr19:40715576-40716076 ( 14) TGAGTCA 1 chr10:18607459-18607959 ( 29) TGAGTCA 1 chr8:16825906-16826406 ( 86) TGAGTCA 1 chr17:40314515-40315015 ( 72) TGAGTCA 1 chr17:73474231-73474731 ( 42) TGAGTCA 1 chr17:65228908-65229408 ( 93) TGAGTCA 1 chr9:1458449-1458949 ( 92) TGAGTCA 1 chr6:27633168-27633668 ( 8) TGAGTCA 1 chr17:1080673-1081173 ( 81) TGAGTCA 1 chr19:40219816-40220316 ( 27) TGAGTCA 1 chr11:36149617-36150117 ( 21) TGAGTCA 1 chr5:34923858-34924358 ( 71) TGAGTCA 1 chr10:89861899-89862399 ( 9) TGAGTCA 1 chr1:225425273-225425773 ( 54) TGAGTCA 1 chr1:228903016-228903516 ( 12) TGAGTCA 1 chr1:175470895-175471395 ( 54) TGAGTCA 1 chr10:63707224-63707724 ( 72) TGAGTCA 1 chr1:67700642-67701142 ( 64) TGAGTCA 1 chr22:40711474-40711974 ( 29) TGAGTCA 1 chr20:62088361-62088861 ( 94) TGAGTCA 1 chr13:42720381-42720881 ( 12) TGAGTCA 1 chr16:9047726-9048226 ( 19) TGAGTCA 1 chr19:36139781-36140281 ( 84) TGAGTCA 1 chr5:76790524-76791024 ( 14) TGAGTCA 1 chr4:72112473-72112973 ( 12) TGAGTCA 1 chr22:39748824-39749324 ( 43) TGAGTCA 1 chr5:133240405-133240905 ( 67) TGAGTCA 1 chr2:172253134-172253634 ( 77) TGAGTCA 1 chr12:80186624-80187124 ( 67) TGAGTCA 1 chr10:110512720-11051322 ( 88) TGAGTCA 1 chr16:4944727-4945227 ( 40) TGAGTCA 1 chr10:68153615-68154115 ( 48) TGAGTCA 1 chr12:114914228-11491472 ( 26) TGAGTCA 1 chr16:15502263-15502763 ( 28) TGAGTCA 1 chr6:111591367-111591867 ( 52) TGAGTCA 1 chr1:30058907-30059407 ( 21) TGAGTCA 1 chr7:128523196-128523696 ( 24) TGAGTCA 1 chr17:3890061-3890561 ( 77) TGAGTCA 1 chr1:225508453-225508953 ( 8) TGAGTCA 1 chr13:100392659-10039315 ( 37) TGAGTCA 1 chr10:103908271-10390877 ( 11) TGAGTCA 1 chr2:239257439-239257939 ( 37) TGAGTCA 1 chr10:75469021-75469521 ( 79) TGAGTCA 1 chr17:45371583-45372083 ( 71) TGAGTCA 1 chr10:114623819-11462431 ( 58) TGAGTCA 1 chr10:33134018-33134518 ( 30) TGAGTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 7 n= 56306 bayes= 10.5245 E= 7.6e-020 -1262 -1262 -1262 196 -1262 -1262 204 -1262 196 -1262 -1262 -1262 -1262 -1262 204 -1262 -1262 -1262 -1262 196 -1262 204 -1262 -1262 196 -1262 -1262 -1262 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 7 nsites= 63 E= 7.6e-020 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-9 regular expression -------------------------------------------------------------------------------- TGAGTCA -------------------------------------------------------------------------------- Time 3843.25 secs. ******************************************************************************** ******************************************************************************** MOTIF GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC MEME-10 width = 43 sites = 10 llr = 327 E-value = 1.0e-025 ******************************************************************************** -------------------------------------------------------------------------------- Motif GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC MEME-10 Description -------------------------------------------------------------------------------- Simplified A 161::694:22:19:::::3:6::5629:1::7542::1:95: pos.-specific C :2:51::69454::692533:2::3:1::2a51:4:5:9::5a probability G 7:::64:::11691::3:14a22:2161a2:325:8:7::::: matrix T 22953:1:132:::41556:::8a:31::5:2::2:53:a1:: bits 2.0 * * * * * * 1.8 * * * * * * 1.6 * * * * * * * ** * 1.4 * * * ** * * * ** * *** * Relative 1.2 * * * ** * * ** ** * * **** * Entropy 1.0 ** **** ***** * * ** ** * * ******** (47.2 bits) 0.8 * ******* ***** * * ** ** * ** ******** 0.6 ********* ******** ****** ** **** ******** 0.4 ********* ****************** ************* 0.2 ******************************************* 0.0 ------------------------------------------- Multilevel GATCGAACCCCGGACCTCTGGATTAAGAGTCCAAAGCGCTAAC consensus TC TTG A TAC T GTCA CG CTA C GGGCATT C sequence T AT C C G G G T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------- chr6:28941361-28941861 + 52 6.09e-20 gttccaccga gatttgaactcggatcgctggattcagagtccagagtgctaac cattac chr15:65868830-65869330 + 44 6.09e-20 gttccaccga gatttgaactcggatcgctggattcagagtccagagtgctaac cattacacca chr1:161540048-161540548 - 11 1.00e-16 CCCTGGGTGG GATCGAACCACCAACCTTTCGGTTAACAGCCGAACGCGCTAAC CGATTGCGCC chr6:28589184-28589684 - 12 1.00e-16 GTCCCACCGA GATTCGAACTCGGATTGCTGGATTCAAAGTCCAGAGTGCTAAC CATTACACCA chr16:3191262-3191762 - 56 3.28e-16 GG GCTCGAACCCACGACCCTGAGATTAAGAGTCCCATGCTCTACC GACTGAGCTA chr8:123157003-123157503 + 40 3.60e-16 cccgtgtgag gatcgaactcacgaccttcagattatgagactgacgcgctacc tactgcgcta chr1:204506841-204507341 + 2 2.34e-15 g acttgaaccctggaccctcagattaaaagtctgatgctctacc gactgagcta chr17:82494485-82494985 + 49 5.26e-14 cagaggatgg tttcgatccatcgacctctgggttatgggcccagcacgcttcc gctgcgcca chr5:181169376-181169876 - 51 6.52e-14 CGCCCGG TTTCGAACCGGGGACCTTTCGCGTGTTAGGCGAACGTGATAAC CACTACACTA chr1:16545726-16546226 + 25 1.03e-13 cattggccgg gaattgaacccgggtctcccgcgtgggaggcgagaattctacc actgaaccac -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:28941361-28941861 6.1e-20 51_[+10]_6 chr15:65868830-65869330 6.1e-20 43_[+10]_14 chr1:161540048-161540548 1e-16 10_[-10]_47 chr6:28589184-28589684 1e-16 11_[-10]_46 chr16:3191262-3191762 3.3e-16 55_[-10]_2 chr8:123157003-123157503 3.6e-16 39_[+10]_18 chr1:204506841-204507341 2.3e-15 1_[+10]_56 chr17:82494485-82494985 5.3e-14 48_[+10]_9 chr5:181169376-181169876 6.5e-14 50_[-10]_7 chr1:16545726-16546226 1e-13 24_[+10]_33 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC width=43 seqs=10 chr6:28941361-28941861 ( 52) GATTTGAACTCGGATCGCTGGATTCAGAGTCCAGAGTGCTAAC 1 chr15:65868830-65869330 ( 44) GATTTGAACTCGGATCGCTGGATTCAGAGTCCAGAGTGCTAAC 1 chr1:161540048-161540548 ( 11) GATCGAACCACCAACCTTTCGGTTAACAGCCGAACGCGCTAAC 1 chr6:28589184-28589684 ( 12) GATTCGAACTCGGATTGCTGGATTCAAAGTCCAGAGTGCTAAC 1 chr16:3191262-3191762 ( 56) GCTCGAACCCACGACCCTGAGATTAAGAGTCCCATGCTCTACC 1 chr8:123157003-123157503 ( 40) GATCGAACTCACGACCTTCAGATTATGAGACTGACGCGCTACC 1 chr1:204506841-204507341 ( 2) ACTTGAACCCTGGACCCTCAGATTAAAAGTCTGATGCTCTACC 1 chr17:82494485-82494985 ( 49) TTTCGATCCATCGACCTCTGGGTTATGGGCCCAGCACGCTTCC 1 chr5:181169376-181169876 ( 51) TTTCGAACCGGGGACCTTTCGCGTGTTAGGCGAACGTGATAAC 1 chr1:16545726-16546226 ( 25) GAATTGAACCCGGGTCTCCCGCGTGGGAGGCGAGAATTCTACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 43 n= 34742 bayes= 10.2967 E= 1.0e-025 -136 -997 152 -36 123 -29 -997 -36 -136 -997 -997 181 -997 104 -997 96 -997 -128 130 23 123 -997 71 -997 181 -997 -997 -136 64 130 -997 -997 -997 188 -997 -136 -36 71 -128 23 -36 104 -128 -36 -997 71 130 -997 -136 -997 188 -997 181 -997 -128 -997 -997 130 -997 64 -997 188 -997 -136 -997 -29 30 96 -997 104 -997 96 -997 30 -128 123 23 30 71 -997 -997 -997 204 -997 123 -29 -29 -997 -997 -997 -29 164 -997 -997 -997 196 96 30 -29 -997 123 -997 -128 23 -36 -128 130 -136 181 -997 -128 -997 -997 -997 204 -997 -136 -29 -29 96 -997 204 -997 -997 -997 104 30 -36 145 -128 -29 -997 96 -997 104 -997 64 71 -997 -36 -36 -997 171 -997 -997 104 -997 96 -997 -997 152 23 -136 188 -997 -997 -997 -997 -997 196 181 -997 -997 -136 96 104 -997 -997 -997 204 -997 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 43 nsites= 10 E= 1.0e-025 0.100000 0.000000 0.700000 0.200000 0.600000 0.200000 0.000000 0.200000 0.100000 0.000000 0.000000 0.900000 0.000000 0.500000 0.000000 0.500000 0.000000 0.100000 0.600000 0.300000 0.600000 0.000000 0.400000 0.000000 0.900000 0.000000 0.000000 0.100000 0.400000 0.600000 0.000000 0.000000 0.000000 0.900000 0.000000 0.100000 0.200000 0.400000 0.100000 0.300000 0.200000 0.500000 0.100000 0.200000 0.000000 0.400000 0.600000 0.000000 0.100000 0.000000 0.900000 0.000000 0.900000 0.000000 0.100000 0.000000 0.000000 0.600000 0.000000 0.400000 0.000000 0.900000 0.000000 0.100000 0.000000 0.200000 0.300000 0.500000 0.000000 0.500000 0.000000 0.500000 0.000000 0.300000 0.100000 0.600000 0.300000 0.300000 0.400000 0.000000 0.000000 0.000000 1.000000 0.000000 0.600000 0.200000 0.200000 0.000000 0.000000 0.000000 0.200000 0.800000 0.000000 0.000000 0.000000 1.000000 0.500000 0.300000 0.200000 0.000000 0.600000 0.000000 0.100000 0.300000 0.200000 0.100000 0.600000 0.100000 0.900000 0.000000 0.100000 0.000000 0.000000 0.000000 1.000000 0.000000 0.100000 0.200000 0.200000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.300000 0.200000 0.700000 0.100000 0.200000 0.000000 0.500000 0.000000 0.500000 0.000000 0.400000 0.400000 0.000000 0.200000 0.200000 0.000000 0.800000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.700000 0.300000 0.100000 0.900000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.900000 0.000000 0.000000 0.100000 0.500000 0.500000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GATYKRAMCHCSGAYCKYYVGATTMWGAGTCSARHGYGCTAMC MEME-10 regular expression -------------------------------------------------------------------------------- [GT][ACT]T[CT][GT][AG]A[CA]C[CTA][CAT][GC]GA[CT]C[TGC][CT][TC][GAC]G[ACG][TG]T[ACG][AT][GA]AG[TCG]C[CGT][AG][AG][ACT][GA][CT][GT]CTA[AC]C -------------------------------------------------------------------------------- Time 4208.77 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:619963-620463 8.55e-03 52_[+5(3.37e-05)]_32 chr5:14264532-14265032 1.65e-02 52_[-7(4.45e-06)]_26 chr18:35583094-35583594 8.96e-01 100 chr1:46387843-46388343 3.04e-03 12_[-2(1.75e-06)]_72 chr10:17201428-17201928 4.19e-02 8_[+7(2.01e-06)]_9_[+7(6.32e-05)]_\ 39 chr3:128859498-128859998 1.14e-01 35_[-4(2.92e-05)]_45 chr4:176619305-176619805 6.21e-19 22_[+1(2.01e-11)]_3_[-2(9.61e-10)]_\ 1_[+5(9.19e-08)]_20 chr1:21939564-21940064 7.28e-02 21_[-4(6.66e-07)]_59 chr19:34481381-34481881 3.03e-02 27_[+7(5.90e-06)]_51 chr10:72272717-72273217 5.80e-01 100 chr11:19769098-19769598 1.00e-03 49_[-2(9.61e-10)]_35 chr11:3443916-3444416 4.15e-03 4_[-4(5.64e-07)]_76 chr1:210347068-210347568 5.84e-01 100 chr3:181329017-181329517 9.43e-01 100 chr11:94767907-94768407 7.23e-01 100 chr1:17207981-17208481 6.05e-01 100 chr1:206612239-206612739 1.30e-02 8_[-7(1.84e-05)]_38_[+7(6.06e-07)]_\ 10 chr1:224615792-224616292 1.92e-01 73_[+7(2.76e-05)]_5 chr22:41446546-41447046 1.10e-02 23_[+7(7.77e-06)]_55 chr10:33134018-33134518 5.94e-02 29_[-9(6.24e-05)]_21_[+5(3.37e-05)]_\ 27 chr10:114623819-11462431 2.82e-01 57_[+9(6.24e-05)]_36 chr17:7484218-7484718 4.37e-01 100 chr1:52502760-52503260 5.75e-03 28_[-4(1.73e-09)]_52 chr10:101060877-10106137 1.69e-01 77_[+7(1.84e-05)]_1 chr2:113583785-113584285 1.14e-03 13_[-7(5.47e-05)]_29_[-7(4.63e-08)]_\ 14 chr19:43619301-43619801 1.58e-02 57_[-7(1.22e-07)]_21 chr6:28747576-28748076 9.46e-01 100 chr1:26695382-26695882 3.40e-02 4_[+7(4.72e-05)]_38_[+7(1.32e-05)]_\ 14 chr13:46120049-46120549 9.18e-01 100 chr17:59619575-59620075 4.59e-02 23_[-7(9.51e-07)]_55 chr20:50366563-50367063 1.71e-04 53_[-4(1.94e-07)]_27 chr17:48492598-48493098 7.79e-01 100 chr15:58755918-58756418 3.17e-03 17_[-4(6.46e-09)]_63 chr13:113296913-11329741 1.73e-01 34_[-7(2.00e-05)]_15_[+7(8.38e-05)]_\ 7 chr15:70111212-70111712 5.87e-01 100 chr6:154613305-154613805 9.17e-02 4_[+2(1.09e-05)]_80 chrUn_GL000214v1:125144- 3.69e-01 100 chr17:46267007-46267507 4.71e-02 17_[+7(1.01e-05)]_61 chr19:4400509-4401009 6.68e-01 100 chr17:73092613-73093113 8.20e-02 25_[-2(4.67e-05)]_28_[-2(6.05e-06)]_\ 15 chr15:65610890-65611390 1.51e-01 65_[+7(2.00e-05)]_13 chr16:3191262-3191762 6.49e-08 55_[-10(3.28e-16)]_2 chr12:31636601-31637101 6.76e-03 66_[-4(8.40e-08)]_14 chr5:139517798-139518298 7.50e-04 31_[-7(4.89e-06)]_22_[+4(8.74e-06)]_\ 5 chr6:132567508-132568008 2.18e-02 28_[+2(5.74e-08)]_56 chr17:45371583-45372083 3.65e-04 3_[+7(8.50e-06)]_19_[+7(5.40e-07)]_\ 4_[-9(6.24e-05)]_23 chrX:71532761-71533261 2.60e-01 11_[-1(6.43e-05)]_67 chr11:33802567-33803067 3.34e-02 25_[+4(4.03e-05)]_55 chr17:28336288-28336788 4.46e-01 53_[-6(9.58e-05)]_25 chr7:128899399-128899899 1.28e-01 1_[+2(2.49e-05)]_83 chr10:75469021-75469521 1.99e-01 78_[+9(6.24e-05)]_15 chr15:65517496-65517996 2.95e-01 25_[-7(8.38e-05)]_53 chr8:144456483-144456983 9.98e-01 100 chr2:239257439-239257939 9.62e-02 36_[-9(6.24e-05)]_57 chr17:78872377-78872877 1.20e-01 51_[-2(2.09e-06)]_33 chr8:23287825-23288325 2.05e-01 14_[+7(2.76e-05)]_40_[+7(8.98e-05)]_\ 2 chr10:102743340-10274384 7.50e-01 100 chr10:103908271-10390877 7.28e-04 10_[+9(6.24e-05)]_31_[-4(3.58e-06)]_\ 32 chr2:129870962-129871462 1.31e-21 [+6(4.37e-10)]_21_[-5(8.71e-06)]_19_\ [-1(1.00e-13)] chr10:79178547-79179047 1.51e-03 65_[+2(1.70e-07)]_19 chr6:35259421-35259921 1.73e-01 100 chr5:96935784-96936284 3.44e-02 34_[-7(1.63e-06)]_44 chr13:100392659-10039315 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[+5(1.91e-07)]_4_[+3(9.80e-11)]_18 chr1:232620484-232620984 2.52e-02 21_[-4(1.60e-06)]_39_[-4(4.46e-05)] chr8:94648231-94648731 1.69e-02 23_[-2(6.53e-08)]_61 chr1:112700752-112701252 8.91e-04 15_[+4(8.40e-08)]_31_[+4(7.63e-05)]_\ 14 chr15:70062314-70062814 1.69e-02 29_[+4(1.06e-06)]_51 chr13:110965217-11096571 5.77e-01 11_[-9(6.24e-05)]_10_[-9(6.24e-05)]_\ 21_[-9(6.24e-05)]_10_[-9(6.24e-05)]_20 chr19:41501302-41501802 7.17e-04 30_[+3(1.99e-06)]_5_[-4(9.84e-07)]_\ 23 chr1:34637039-34637539 6.85e-14 2_[-2(2.40e-07)]_1_[+5(1.27e-06)]_4_\ [+3(3.65e-08)]_1_[-6(2.40e-10)]_16 chr5:126885501-126886001 4.56e-02 44_[+2(1.22e-06)]_40 chr14:31241471-31241971 1.61e-28 7_[+1(1.00e-13)]_3_[-2(3.36e-07)]_1_\ [+5(1.27e-09)]_4_[+3(2.55e-09)]_9 chr19:34218182-34218682 4.23e-01 79_[+4(3.01e-05)]_1 chr9:83336971-83337471 2.26e-20 12_[-3(1.69e-09)]_4_[-5(1.47e-08)]_\ 1_[+2(5.74e-08)]_3_[-1(4.49e-09)]_4 chr13:112849470-11284997 7.85e-03 38_[+4(2.16e-07)]_42 chr19:33176888-33177388 3.83e-03 19_[+7(1.18e-06)]_59 chr14:95291769-95292269 2.21e-03 24_[-4(2.19e-09)]_56 chr15:26724585-26725085 1.28e-20 [+6(1.85e-11)]_1_[-3(2.30e-09)]_3_\ [-5(5.33e-06)]_1_[+2(2.40e-07)]_2_[+8(1.03e-08)]_1 chr5:170190689-170191189 1.42e-01 38_[-2(3.22e-05)]_46 chr10:93702416-93702916 3.66e-01 100 chr2:16254507-16255007 7.91e-21 5_[-3(1.88e-10)]_17_[+2(1.07e-07)]_\ 3_[-1(3.50e-13)]_15 chr9:84303714-84304214 1.29e-23 15_[-3(1.79e-12)]_4_[-5(5.41e-09)]_\ 1_[+2(7.71e-09)]_2_[-1(4.58e-11)]_2 chr19:39411908-39412408 6.77e-01 100 chr13:110986520-11098702 4.12e-16 22_[-3(9.99e-10)]_4_[-5(1.73e-09)]_\ 1_[+2(1.08e-08)]_1_[+8(1.85e-08)]_2 chr19:17334548-17335048 2.97e-03 1_[-7(3.49e-05)]_3_[+7(7.08e-08)]_2_\ [+7(5.09e-05)]_28 chr10:125973186-12597368 6.94e-01 46_[+9(6.24e-05)]_40_[-9(6.24e-05)] chr11:57735355-57735855 7.50e-23 4_[+1(2.36e-11)]_3_[-2(1.47e-09)]_1_\ [+5(1.35e-07)]_4_[+3(9.99e-10)]_12 chr19:40920883-40921383 4.80e-05 20_[+1(1.86e-06)]_58 chr8:33648777-33649277 1.74e-13 14_[-2(1.70e-07)]_1_[+5(2.81e-09)]_\ 27_[-6(7.28e-13)]_4 chr1:143264416-143264916 9.84e-01 100 chrX:73944024-73944524 1.43e-02 67_[+7(2.01e-06)]_11 chr1:234256611-234257111 1.88e-18 15_[-3(3.39e-10)]_21_[+2(2.93e-06)]_\ 4_[-1(1.37e-12)] chr14:69716061-69716561 1.58e-05 8_[-2(1.92e-07)]_7_[+4(1.37e-08)]_\ 49 chr4:3852691-3853191 3.09e-14 37_[-5(6.17e-06)]_1_[+2(1.11e-06)]_\ 3_[-1(3.90e-12)]_5 chr14:68088970-68089470 3.79e-01 38_[+2(1.36e-05)]_46 chr14:39486443-39486943 2.38e-17 1_[-2(6.53e-08)]_1_[+5(8.74e-09)]_2_\ [+3(2.18e-08)]_1_[-6(5.69e-12)]_19 chr5:73103727-73104227 5.92e-24 11_[-3(1.26e-10)]_5_[-5(3.17e-05)]_\ 1_[+2(4.41e-06)]_3_[-1(1.52e-12)]_4 chr1:204876642-204877142 2.17e-10 54_[+1(2.45e-10)]_2_[-2(1.70e-07)]_\ 6 chr2:165825018-165825518 2.15e-04 29_[-4(4.28e-09)]_51 chr17:45336222-45336722 9.52e-03 57_[+2(8.35e-05)]_3_[-1(1.32e-05)]_\ 2 chr1:93078889-93079389 4.02e-01 100 chr18:45755950-45756450 1.41e-04 38_[+4(1.34e-09)]_42 chrUn_KI270466v1:211-711 5.63e-01 55_[+6(8.44e-05)]_23 chr1:68384313-68384813 1.75e-01 33_[+10(7.77e-05)]_24 chr1:234724134-234724634 6.53e-03 57_[-4(1.81e-06)]_23 chr6:31777119-31777619 3.32e-05 47_[-4(1.34e-09)]_33 chr21:16420012-16420512 2.19e-02 60_[+4(3.58e-07)]_20 chr11:65919105-65919605 3.65e-02 71_[-7(5.05e-09)]_7 chr10:21724676-21725176 3.91e-03 61_[-4(1.55e-07)]_19 chr1:109769203-109769703 1.51e-02 21_[+2(1.60e-06)]_31_[+9(6.24e-05)]_\ 25 chr17:63842508-63843008 4.43e-01 100 chr2:172781064-172781564 9.90e-16 2_[+1(4.89e-14)]_3_[-2(4.32e-09)]_\ 57 chr15:84914912-84915412 4.65e-03 50_[+2(8.80e-06)]_34 chr2:178484602-178485102 2.00e-02 50_[+4(4.88e-08)]_30 chr5:10304230-10304730 1.13e-12 19_[-3(2.47e-07)]_4_[-5(4.03e-05)]_\ 1_[+2(3.73e-08)]_2_[+8(6.63e-10)]_4 chr19:29295261-29295761 2.31e-18 21_[-3(3.79e-11)]_4_[-5(1.02e-08)]_\ 1_[+2(1.07e-07)]_2_[+8(4.31e-10)]_2 chr10:94673539-94674039 6.68e-01 100 chr8:41076341-41076841 4.39e-18 19_[-5(5.39e-08)]_1_[+2(4.32e-09)]_\ 3_[-1(6.04e-12)]_23 chr5:172437415-172437915 1.01e-02 35_[-4(1.22e-06)]_45 chr5:140295376-140295876 3.72e-02 44_[-4(2.05e-06)]_36 chr4:184617464-184617964 2.71e-20 4_[+1(1.04e-09)]_3_[-2(2.70e-07)]_1_\ [+5(4.69e-07)]_4_[+3(8.13e-12)]_12 chr10:95812955-95813455 1.95e-19 7_[+1(5.50e-12)]_3_[-2(8.42e-08)]_\ 19_[+3(1.52e-09)]_11 chr11:102684748-10268524 2.75e-15 55_[+2(2.29e-08)]_3_[-1(4.89e-14)]_\ 4 chr17:28532048-28532548 6.61e-03 44_[+2(1.53e-07)]_40 chr12:121404665-12140516 9.75e-04 51_[-4(6.46e-09)]_29 chr19:29914883-29915383 4.78e-16 15_[+5(4.96e-09)]_4_[+3(3.76e-12)]_\ 1_[-6(8.79e-11)]_20 chr1:5965836-5966336 3.55e-17 4_[-5(6.19e-07)]_1_[+2(4.32e-09)]_3_\ [-1(4.89e-14)]_38 chr13:102752151-10275265 1.12e-14 38_[+2(4.32e-09)]_3_[-1(1.78e-12)]_\ 21 chr7:157889480-157889980 3.24e-21 5_[+6(3.89e-12)]_[-3(5.04e-13)]_21_\ [+2(4.32e-09)]_14 chr7:69624344-69624844 6.43e-03 48_[+2(6.28e-05)]_36 chr6:7833414-7833914 4.62e-03 23_[+2(3.73e-08)]_24_[+6(8.22e-05)]_\ 15 chr17:25919964-25920464 8.66e-01 32_[+3(8.26e-05)]_46 chrUn_KI270467v1:1910-24 1.49e-02 17_[-3(7.51e-05)]_10_[+6(2.78e-08)]_\ 29 chr1:153880941-153881441 3.03e-02 46_[+4(2.95e-07)]_34 chr7:116786151-116786651 5.44e-03 39_[-2(8.18e-06)]_6_[-2(8.83e-05)]_\ 23 chr16:22077588-22078088 9.89e-03 37_[+2(3.73e-08)]_47 chrUn_KI270467v1:2588-30 5.09e-01 44_[-3(7.51e-05)]_34 chr5:71946183-71946683 1.71e-16 19_[+1(1.87e-11)]_3_[-2(4.41e-06)]_\ 1_[+5(1.58e-07)]_23 chr6:17715081-17715581 1.95e-02 61_[+2(3.19e-06)]_23 chr1:181127024-181127524 4.61e-05 9_[+1(5.92e-05)]_19_[-4(3.45e-09)]_\ 30 chr1:232866831-232867331 3.85e-14 5_[+1(7.57e-12)]_2_[-2(5.17e-06)]_1_\ [+5(1.58e-05)]_3_[+3(2.42e-06)]_13 chr5:144037403-144037903 5.03e-02 38_[-2(1.46e-06)]_46 chr13:36610500-36611000 4.27e-20 8_[+1(2.90e-11)]_3_[-2(1.75e-08)]_1_\ [+5(1.27e-09)]_4_[+3(2.60e-08)]_8 chr2:47676504-47677004 5.16e-25 4_[-3(2.13e-10)]_4_[-5(1.06e-09)]_1_\ [+2(4.32e-09)]_3_[-1(2.87e-10)]_12 chr8:63153101-63153601 3.86e-15 32_[+1(4.57e-13)]_3_[-2(1.75e-08)]_\ 27 chr8:19537288-19537788 4.84e-27 [+6(2.40e-10)]_1_[-3(5.04e-13)]_4_\ [-5(3.15e-08)]_1_[+2(2.32e-10)]_1_[+8(7.27e-09)]_1 chr2:134764761-134765261 4.04e-23 12_[-3(9.80e-11)]_4_[-5(1.29e-08)]_\ 1_[+2(2.71e-08)]_2_[-1(1.39e-11)]_5 chr6:32868089-32868589 6.83e-03 26_[+2(8.33e-07)]_58 chr10:6088659-6089159 7.81e-02 39_[-7(7.09e-06)]_39 chr10:93208963-93209463 8.60e-01 39_[+2(4.67e-05)]_45 chrX:1511188-1511688 3.14e-19 1_[-3(9.71e-09)]_4_[-5(2.63e-05)]_1_\ [+2(6.87e-07)]_2_[-1(4.57e-13)]_16 chr3:99925551-99926051 7.02e-02 54_[-2(3.75e-07)]_30 chr17:26885529-26886029 5.90e-01 100 chr14_GL000225v1_random: 7.23e-01 100 chr1:111586910-111587410 1.44e-02 50_[-2(2.93e-06)]_34 chr8:24940262-24940762 6.64e-13 60_[+2(2.19e-05)]_2_[-1(3.34e-12)] chr15:75717667-75718167 4.30e-03 58_[-8(1.52e-05)]_26 chr6:106829667-106830167 1.03e-24 4_[-3(4.78e-11)]_4_[-5(7.15e-08)]_1_\ [+2(1.46e-06)]_3_[-1(1.47e-13)]_12 chr17:77233791-77234291 6.50e-01 58_[+3(7.51e-05)]_20 chr8:144068040-144068540 2.54e-15 22_[-5(7.15e-08)]_1_[+2(2.70e-07)]_\ 3_[-1(6.04e-12)]_20 chr6:129771936-129772436 1.01e-19 5_[-3(1.28e-08)]_20_[+2(1.79e-05)]_\ 3_[-1(1.00e-13)]_12 chr19:48539581-48540081 1.04e-03 30_[+4(2.19e-09)]_50 chr2:113809360-113809860 1.59e-21 7_[-3(5.27e-10)]_4_[-5(2.54e-07)]_1_\ [+2(3.73e-08)]_3_[-1(4.83e-12)]_9 chr1:80054137-80054637 3.15e-03 53_[-4(1.93e-08)]_27 chr9:136738025-136738525 6.17e-23 9_[+1(2.63e-11)]_3_[-2(2.70e-06)]_1_\ [+5(1.64e-06)]_5_[+3(1.25e-11)]_6 chr17:78558303-78558803 9.96e-01 100 chr6:26204079-26204579 3.60e-01 100 chr1:226450676-226451176 2.42e-21 9_[-3(2.40e-10)]_4_[-5(1.12e-07)]_1_\ [+2(4.32e-09)]_3_[-1(1.35e-10)]_7 chr10:112951743-11295224 5.14e-02 100 chr10:44932673-44933173 2.59e-02 50_[+2(1.67e-05)]_34 chr9:69085576-69086076 1.89e-17 [+1(1.04e-09)]_3_[-2(9.61e-10)]_19_\ [+3(2.60e-08)]_18 chr6:2543072-2543572 2.09e-24 10_[-3(1.87e-09)]_4_[-5(7.77e-07)]_\ 1_[+2(5.30e-09)]_3_[-1(2.74e-12)]_6 chr2:235046889-235047389 4.01e-18 13_[+1(1.99e-10)]_3_[-2(9.61e-10)]_\ 1_[+5(1.27e-09)]_29 chr17:26619783-26620283 2.38e-01 100 chr1:227628500-227629000 2.50e-03 37_[-2(5.17e-06)]_47 chr8:74099487-74099987 1.53e-17 22_[-3(7.29e-07)]_4_[-5(8.74e-09)]_\ 1_[+2(9.61e-10)]_2_[+8(6.63e-10)]_1 chr8:140821815-140822315 5.94e-02 36_[+2(2.28e-06)]_48 chr10:25974795-25975295 9.71e-28 [-8(4.60e-09)]_1_[-2(1.41e-08)]_1_\ [+5(6.32e-10)]_4_[+3(1.79e-12)]_1_[-6(1.93e-12)]_1 chr5:10601229-10601729 7.16e-04 21_[-4(8.40e-08)]_7_[-4(2.45e-06)]_\ 32 chr15:60374686-60375186 1.54e-01 16_[+9(6.24e-05)]_77 chr16:85551532-85552032 1.41e-02 48_[-2(8.33e-07)]_36 chr1:150196425-150196925 8.26e-28 4_[-3(2.41e-11)]_4_[-5(1.95e-09)]_1_\ [+2(6.87e-07)]_2_[-1(1.00e-13)]_13 chr13:97425862-97426362 7.52e-17 8_[-3(4.58e-12)]_16_[+2(7.41e-08)]_\ 2_[-1(1.24e-10)]_14 chr1:229221453-229221953 2.03e-03 44_[+4(5.64e-07)]_36 chr1:116732361-116732861 1.75e-19 16_[-8(2.21e-10)]_2_[-2(4.32e-09)]_\ 20_[+3(1.25e-11)]_8 chr5:77029734-77030234 3.66e-16 19_[-5(3.71e-07)]_1_[+2(3.75e-07)]_\ 3_[-1(3.15e-11)]_23 chr7:98066071-98066571 1.57e-22 9_[+1(6.06e-13)]_2_[-2(7.41e-08)]_1_\ [+5(2.20e-06)]_4_[+3(2.40e-10)]_8 chr17:41360219-41360719 2.64e-25 10_[+1(3.34e-12)]_2_[-2(1.46e-06)]_\ 1_[+5(1.02e-08)]_4_[+3(3.39e-10)]_7 chr10:87586160-87586660 5.46e-03 28_[+9(6.24e-05)]_20_[+4(1.08e-07)]_\ 25 chr4:80074547-80075047 7.04e-27 5_[+1(1.00e-13)]_2_[-2(1.46e-06)]_1_\ [+5(2.81e-09)]_4_[+3(6.58e-12)]_12 chr1:25911003-25911503 1.54e-10 10_[+1(4.57e-13)]_68 chr2:218707708-218708208 1.05e-21 13_[+1(4.20e-11)]_2_[-2(1.75e-08)]_\ 1_[+5(5.41e-09)]_4_[+3(1.52e-09)]_4 chr12:6092747-6093247 2.43e-20 4_[-3(1.34e-06)]_4_[-5(2.36e-07)]_1_\ [+2(6.87e-07)]_2_[-1(1.00e-13)]_13 chr10:72857878-72858378 6.93e-20 8_[+1(4.89e-14)]_3_[-2(9.61e-10)]_1_\ [+5(3.71e-07)]_3_[+3(1.44e-05)]_9 chr22:44500502-44501002 3.89e-25 16_[-3(5.85e-10)]_4_[-5(5.11e-07)]_\ 1_[+2(6.53e-08)]_3_[-1(1.32e-12)] chr18:13328196-13328696 7.45e-30 9_[-3(1.25e-11)]_4_[-5(1.47e-08)]_1_\ [+2(4.32e-09)]_3_[-1(4.89e-14)]_7 chr17:26603656-26604156 9.31e-01 100 chr2:69646919-69647419 1.97e-16 1_[+6(6.81e-09)]_1_[-3(4.32e-08)]_4_\ [-5(2.40e-06)]_1_[+2(2.40e-07)]_1_[+8(3.29e-09)] chr6:106911216-106911716 3.92e-27 17_[+1(2.39e-12)]_3_[-2(4.32e-09)]_\ [+5(4.96e-09)]_4_[+3(5.04e-13)] chr1:90926180-90926680 2.64e-18 14_[-3(8.02e-10)]_3_[-5(2.59e-06)]_\ 1_[+2(7.41e-08)]_2_[-1(5.15e-10)]_4 chr1:100036721-100037221 7.82e-03 8_[-9(6.24e-05)]_16_[-2(6.87e-07)]_\ 53 chr6:143841056-143841556 3.29e-17 8_[+1(1.47e-13)]_3_[-2(3.00e-07)]_1_\ [+5(1.23e-07)]_34 chr18:62310801-62311301 1.16e-24 2_[-3(8.07e-09)]_4_[-5(2.11e-10)]_1_\ [+2(1.53e-07)]_2_[-1(2.74e-12)]_15 chr14:50961926-50962426 3.27e-01 54_[+2(1.18e-05)]_30 chr14:49861965-49862465 9.24e-01 100 chr4:3755135-3755635 9.11e-16 41_[-5(5.41e-09)]_1_[+2(2.40e-07)]_\ 3_[-1(5.15e-10)]_1 chr9:135680816-135681316 6.82e-12 5_[-8(1.98e-08)]_2_[-2(4.32e-09)]_\ 21_[+3(1.24e-07)]_18 chr17:81980420-81980920 1.40e-22 1_[+1(4.89e-14)]_3_[-2(3.73e-08)]_1_\ [+5(2.76e-08)]_4_[+3(1.28e-08)]_15 chr1:59266234-59266734 3.35e-25 [+1(7.09e-13)]_3_[-2(4.32e-09)]_1_\ [+5(3.21e-06)]_4_[+3(5.04e-13)]_16 chr21:42620144-42620644 1.54e-22 5_[+1(4.89e-14)]_3_[-2(4.90e-08)]_1_\ [+5(1.58e-07)]_4_[+3(4.58e-09)]_11 chr6:160053901-160054401 5.66e-24 7_[+1(2.98e-13)]_3_[-2(7.71e-09)]_1_\ [+5(6.17e-06)]_3_[+3(2.18e-08)]_10 chr10:101163898-10116439 6.03e-20 3_[-8(2.21e-10)]_2_[-2(4.32e-09)]_\ 28_[+3(4.78e-11)]_13 chr6:37665716-37666216 1.27e-24 16_[-3(2.13e-10)]_3_[-5(3.15e-08)]_\ 1_[+2(2.40e-07)]_2_[-1(1.32e-12)]_2 chr1:232223214-232223714 4.33e-20 24_[-5(8.74e-09)]_1_[+2(2.14e-07)]_\ 17_[-1(1.17e-11)]_4 chr10:70575612-70576112 2.54e-27 1_[+1(8.61e-13)]_3_[-2(4.32e-09)]_1_\ [+5(4.07e-08)]_4_[+3(1.88e-10)]_15 chr16:74283713-74284213 5.18e-17 4_[+6(3.41e-10)]_1_[-3(1.24e-07)]_2_\ [-5(6.32e-10)]_1_[+2(2.29e-08)]_16 chr11:3057158-3057658 1.68e-03 9_[+7(7.29e-05)]_37_[-7(5.34e-08)]_\ 10 chr1:125179942-125180442 9.96e-01 100 chr19:38995238-38995738 6.12e-18 23_[-5(5.39e-08)]_1_[+2(9.61e-10)]_\ 3_[-1(2.65e-10)]_19 chr4:153211786-153212286 2.91e-11 44_[+2(5.30e-09)]_3_[-1(3.15e-11)]_\ 15 chr1:231066759-231067259 3.98e-22 9_[+1(1.47e-13)]_3_[-2(7.71e-09)]_1_\ [+5(1.87e-08)]_4_[+3(2.18e-08)]_7 chr16:1271746-1272246 1.31e-02 19_[-4(7.37e-08)]_18_[-4(7.37e-08)]_\ 23 chr14:90550255-90550755 2.42e-22 13_[-3(1.11e-09)]_4_[-5(8.74e-09)]_\ 1_[+2(7.41e-08)]_2_[-1(2.16e-11)]_4 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: kali ********************************************************************************