Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.282 C 0.218 G 0.218 T 0.282


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M2387_1.02 SREBF1 chr5 + 134095386 134095395 6.82e-07 0.0829 gtggggtgat
M2387_1.02 SREBF1 chr1 - 28885205 28885214 1.56e-06 0.0829 ATGGGGTGAT
M2387_1.02 SREBF1 chr6 - 138402824 138402833 2.09e-06 0.0829 GTGGGGTGAC
M2387_1.02 SREBF1 chr18 - 49514968 49514977 2.62e-06 0.0829 GTGGGGTGAG
M2387_1.02 SREBF1 chr20 - 232129 232138 3.99e-06 0.0829 ATGGGGTGAG
M2387_1.02 SREBF1 chr16 + 12066832 12066841 3.99e-06 0.0829 ATGGGGTGAG
M2387_1.02 SREBF1 chr12 + 49352663 49352672 3.99e-06 0.0829 atggggtgag
M2387_1.02 SREBF1 chr4 + 2504606 2504615 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr20 - 4613200 4613209 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr16 + 21821064 21821073 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr1 - 25547434 25547443 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr16 - 30347162 30347171 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr20 + 32118691 32118700 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr5 - 32367386 32367395 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr17 - 35763848 35763857 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr22 - 38768633 38768642 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr19 + 39794485 39794494 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr19 + 40346582 40346591 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr6 + 43112324 43112333 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr17 - 44819609 44819618 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr17 + 48186541 48186550 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr20 + 49538740 49538749 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr5 + 73050374 73050383 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr4 - 87084500 87084509 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr14 - 90364159 90364168 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr10 - 97421807 97421816 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr10 - 101751925 101751934 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr7 - 130607192 130607201 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr7 + 131291186 131291195 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr5 - 138703890 138703899 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr5 + 149963334 149963343 4.67e-06 0.0829 gtggcgtgat
M2387_1.02 SREBF1 chr2 - 152208314 152208323 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr1 - 229228652 229228661 4.67e-06 0.0829 GTGGCGTGAT
M2387_1.02 SREBF1 chr19 - 43709442 43709451 5.35e-06 0.0869 CTGGGGTGAT
M2387_1.02 SREBF1 chr17 - 9604701 9604710 6.23e-06 0.0869 ATGGCGTGAT
M2387_1.02 SREBF1 chr1 + 27182179 27182188 6.23e-06 0.0869 atggcgtgat
M2387_1.02 SREBF1 chr19 - 29505877 29505886 6.23e-06 0.0869 ATGGCGTGAT
M2387_1.02 SREBF1 chr5 - 32157928 32157937 6.23e-06 0.0869 ATGGCGTGAT
M2387_1.02 SREBF1 chr1 + 77742998 77743007 6.23e-06 0.0869 atggcgtgat
M2387_1.02 SREBF1 chr14 + 102639589 102639598 6.23e-06 0.0869 atggcgtgat
M2387_1.02 SREBF1 chr9 - 137038557 137038566 6.23e-06 0.0869 ATGGCGTGAT
M2387_1.02 SREBF1 chr1 + 155575878 155575887 6.23e-06 0.0869 atggcgtgat
M2387_1.02 SREBF1 chr1 - 50882553 50882562 7.64e-06 0.104 GTGAGGTGAT
M2387_1.02 SREBF1 chr1 + 81127116 81127125 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584388 130584397 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584425 130584434 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584442 130584451 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584465 130584474 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584502 130584511 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584519 130584528 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584559 130584568 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584633 130584642 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr12 - 130584647 130584656 1.12e-05 0.124 ATGAGGTGAT
M2387_1.02 SREBF1 chr1 - 36266636 36266645 1.24e-05 0.135 CTGGGGTGAG
M2387_1.02 SREBF1 chr5 + 32282332 32282341 1.45e-05 0.145 atggcgtgag
M2387_1.02 SREBF1 chr12 + 56219878 56219887 1.45e-05 0.145 atggcgtgag
M2387_1.02 SREBF1 chr4 + 190112017 190112026 1.45e-05 0.145 atggcgtgag
M2387_1.02 SREBF1 chr22 + 38768839 38768848 1.52e-05 0.145 GTGAGGTGAG
M2387_1.02 SREBF1 chr22 + 41817673 41817682 1.52e-05 0.145 gtgaggtgag
M2387_1.02 SREBF1 chr20 + 2579477 2579486 1.88e-05 0.145 gtggtgtgat
M2387_1.02 SREBF1 chr1 - 16493202 16493211 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr20 + 31895592 31895601 1.88e-05 0.145 gtggtgtgat
M2387_1.02 SREBF1 chr13 - 33247148 33247157 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr5 - 36019654 36019663 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr19 - 37918822 37918831 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr19 + 40795455 40795464 1.88e-05 0.145 gtggtgtgat
M2387_1.02 SREBF1 chr15 - 41247920 41247929 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr11 - 47519431 47519440 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr1 - 67699135 67699144 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr5 - 78762890 78762899 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr17 + 80684500 80684509 1.88e-05 0.145 gtggtgtgat
M2387_1.02 SREBF1 chr15 + 90182681 90182690 1.88e-05 0.145 gtggtgtgat
M2387_1.02 SREBF1 chr9 + 130986024 130986033 1.88e-05 0.145 gtggtgtgat
M2387_1.02 SREBF1 chr8 - 140472969 140472978 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr1 + 204720797 204720806 1.88e-05 0.145 gtggtgtgat
M2387_1.02 SREBF1 chr1 - 225654876 225654885 1.88e-05 0.145 GTGGTGTGAT
M2387_1.02 SREBF1 chr1 - 146377357 146377366 1.97e-05 0.15 ATGAGGTGAG
M2387_1.02 SREBF1 chr19 + 11927607 11927616 2.18e-05 0.155 gtgggctgac
M2387_1.02 SREBF1 chr8 - 26253824 26253833 2.29e-05 0.155 ATGGTGTGAT
M2387_1.02 SREBF1 chr6 + 31755418 31755427 2.29e-05 0.155 atggtgtgat
M2387_1.02 SREBF1 chr10 - 36740029 36740038 2.29e-05 0.155 ATGGTGTGAT
M2387_1.02 SREBF1 chr22 - 39871121 39871130 2.29e-05 0.155 ATGGTGTGAT
M2387_1.02 SREBF1 chr22 - 40158290 40158299 2.29e-05 0.155 ATGGTGTGAT
M2387_1.02 SREBF1 chr17 - 42789615 42789624 2.29e-05 0.155 ATGGTGTGAT
M2387_1.02 SREBF1 chr19 + 50366726 50366735 2.29e-05 0.155 atggtgtgat
M2387_1.02 SREBF1 chr1 + 52879818 52879827 2.29e-05 0.155 atggtgtgat
M2387_1.02 SREBF1 chr5 + 139489963 139489972 2.29e-05 0.155 atggtgtgat
M2387_1.02 SREBF1 chr18 + 58143763 58143772 2.36e-05 0.157 GTGGTGTGAC
M2387_1.02 SREBF1 chr17 - 49136612 49136621 2.48e-05 0.16 GTGGGCTGAG
M2387_1.02 SREBF1 chr1 + 92832595 92832604 2.48e-05 0.16 GTGGGCTGAG
M2387_1.02 SREBF1 chr5 + 138866068 138866077 2.48e-05 0.16 gtgggctgag
M2387_1.02 SREBF1 chr17 + 9604631 9604640 2.55e-05 0.161 gtggtgtgag
M2387_1.02 SREBF1 chr19 + 33945206 33945215 2.55e-05 0.161 GTGGTGTGAG
M2387_1.02 SREBF1 chr16 - 21572604 21572613 2.64e-05 0.165 GTGACGTGAT
M2387_1.02 SREBF1 chr19 + 18106627 18106636 2.86e-05 0.175 atggtgtgac
M2387_1.02 SREBF1 chr16 + 78524238 78524247 2.86e-05 0.175 ATGGTGTGAC
M2387_1.02 SREBF1 chr5 - 1917368 1917377 3.01e-05 0.18 CTGAGGTGAT
M2387_1.02 SREBF1 chr19 + 1383747 1383756 3.07e-05 0.18 CTCGGGTGAT
M2387_1.02 SREBF1 chr17 - 42789439 42789448 3.07e-05 0.18 CTCGGGTGAT
M2387_1.02 SREBF1 chr14 + 74367344 74367353 3.07e-05 0.18 ctcgggtgat
M2387_1.02 SREBF1 chr1 + 155225367 155225376 3.34e-05 0.194 atgacgtgat
M2387_1.02 SREBF1 chr17 + 7012347 7012356 3.46e-05 0.197 GTGACGTGAC
M2387_1.02 SREBF1 chr19 + 37656011 37656020 3.46e-05 0.197 CTGGCGTGAG
M2387_1.02 SREBF1 chr17 + 59442629 59442638 3.69e-05 0.202 gtcaggtgat
M2387_1.02 SREBF1 chr15 - 81040712 81040721 3.69e-05 0.202 GTCAGGTGAT
M2387_1.02 SREBF1 chr6 + 138576222 138576231 3.69e-05 0.202 gtcaggtgat
M2387_1.02 SREBF1 chr5 + 176320464 176320473 3.69e-05 0.202 gtcaggtgat
M2387_1.02 SREBF1 chr19 + 6411524 6411533 4.09e-05 0.214 GTGGCCTGAT
M2387_1.02 SREBF1 chr19 + 6411599 6411608 4.09e-05 0.214 GTGGCCTGAT
M2387_1.02 SREBF1 chr7 - 99581071 99581080 4.38e-05 0.214 CTGAGGTGAG
M2387_1.02 SREBF1 chr7 - 106945793 106945802 4.38e-05 0.214 CTGAGGTGAG
M2387_1.02 SREBF1 chr5 + 122678908 122678917 4.38e-05 0.214 ctgaggtgag
M2387_1.02 SREBF1 chr7 + 130607139 130607148 4.38e-05 0.214 ctgaggtgag
M2387_1.02 SREBF1 chr4 - 183059453 183059462 4.38e-05 0.214 CTGAGGTGAG
M2387_1.02 SREBF1 chr16 + 30631152 30631161 4.5e-05 0.214 atcaggtgat
M2387_1.02 SREBF1 chr6 - 27495761 27495770 4.62e-05 0.214 GTCAGGTGAC
M2387_1.02 SREBF1 chr19 - 1886603 1886612 4.71e-05 0.214 GTGGAGTGAT
M2387_1.02 SREBF1 chr3 - 61732660 61732669 4.71e-05 0.214 GTGGAGTGAT
M2387_1.02 SREBF1 chr16 - 58637289 58637298 4.86e-05 0.214 ATCGCGTGAG
M2387_1.02 SREBF1 chr19 + 1383937 1383946 5e-05 0.214 GTCAGGTGAG
M2387_1.02 SREBF1 chr1 + 236315050 236315059 5e-05 0.214 gtcaggtgag
M2387_1.02 SREBF1 chr10 - 114649353 114649362 5.36e-05 0.214 CTGGTGTGAT
M2387_1.02 SREBF1 chr5 - 34182428 34182437 5.45e-05 0.214 ATGGCCTGAT
M2387_1.02 SREBF1 chr1 - 44782581 44782590 5.45e-05 0.214 ATGGCCTGAT
M2387_1.02 SREBF1 chr19 + 33159276 33159285 5.59e-05 0.214 gtgagctgat
M2387_1.02 SREBF1 chr15 - 90182819 90182828 5.74e-05 0.214 ATGGGGTGAA
M2387_1.02 SREBF1 chr12 - 130584411 130584420 6.01e-05 0.214 GTGATGTGAT
M2387_1.02 SREBF1 chr12 - 130584488 130584497 6.01e-05 0.214 GTGATGTGAT
M2387_1.02 SREBF1 chr12 - 130584545 130584554 6.01e-05 0.214 GTGATGTGAT
M2387_1.02 SREBF1 chr3 + 193970745 193970754 6.01e-05 0.214 GTGATGTGAT
M2387_1.02 SREBF1 chr12 + 64404787 64404796 6.21e-05 0.214 ATGGAGTGAT
M2387_1.02 SREBF1 chr1 + 39806435 39806444 6.39e-05 0.214 ctgggctgac
M2387_1.02 SREBF1 chr22 + 38768625 38768634 6.95e-05 0.214 atgagctgat
M2387_1.02 SREBF1 chr1 + 232869045 232869054 6.95e-05 0.214 ATGAGCTGAT
M2387_1.02 SREBF1 chrX - 23771827 23771836 7.07e-05 0.214 CTGGGCTGAG
M2387_1.02 SREBF1 chr5 - 34193487 34193496 7.07e-05 0.214 CTGGGCTGAG
M2387_1.02 SREBF1 chr1 - 38987592 38987601 7.07e-05 0.214 GTGAGCTGAC
M2387_1.02 SREBF1 chr5 + 128436874 128436883 7.07e-05 0.214 CTGGGCTGAG
M2387_1.02 SREBF1 chr1 - 234872700 234872709 7.07e-05 0.214 GTGAGCTGAC
M2387_1.02 SREBF1 chr17 + 31040951 31040960 7.28e-05 0.214 ttggggtgag
M2387_1.02 SREBF1 chr1 - 230626602 230626611 7.28e-05 0.214 TTGGGGTGAG
M2387_1.02 SREBF1 chr3 + 59167871 59167880 7.78e-05 0.214 ATCGTGTGAT
M2387_1.02 SREBF1 chr19 - 34234713 34234722 7.94e-05 0.214 ATGGAGTGAC
M2387_1.02 SREBF1 chr17 + 1939294 1939303 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr19 + 6411410 6411419 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr19 - 11533325 11533334 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr19 + 12901110 12901119 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr19 + 13587580 13587589 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr19 + 14235428 14235437 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr16 + 14297614 14297623 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr1 - 14997306 14997315 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr19 + 16590981 16590990 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr10 + 17584439 17584448 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr8 - 17616260 17616269 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr16 - 21821074 21821083 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr8 + 21954575 21954584 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr10 - 22822193 22822202 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chrX + 23771892 23771901 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr1 - 27182189 27182198 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr16 - 30591145 30591154 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr5 + 32367376 32367385 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr19 - 32767194 32767203 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr19 - 35323786 35323795 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr19 - 35921280 35921289 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr5 + 36019644 36019653 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr5 - 36019858 36019867 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr19 + 37160283 37160292 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr8 - 37892520 37892529 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 - 39806294 39806303 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr22 - 39870082 39870091 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr22 + 40158280 40158289 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr22 - 41667953 41667962 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr22 - 42474144 42474153 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr19 + 45595217 45595226 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr19 + 46797250 46797259 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr6 - 47138885 47138894 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr11 + 47519421 47519430 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr12 - 48866679 48866688 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr18 - 48873831 48873840 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr17 + 49368327 49368336 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr19 - 50366736 50366745 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr17 - 50877293 50877302 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 - 52847935 52847944 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 + 53994634 53994643 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr16 + 57323958 57323967 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr17 + 59442730 59442739 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr18 - 59883041 59883050 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr10 + 61632172 61632181 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr11 + 64169163 64169172 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr15 - 64346523 64346532 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr16 - 66855335 66855344 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr10 + 72587725 72587734 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chrX - 72720076 72720085 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr6 + 73254402 73254411 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr17 + 76186881 76186890 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr11 - 76859974 76859983 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr16 - 77224017 77224026 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 - 77743008 77743017 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr15 + 80382853 80382862 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr17 + 80809989 80809998 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr4 + 87084490 87084499 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr15 - 90182691 90182700 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr5 - 96818991 96819000 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr10 - 101258757 101258766 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr12 - 111191397 111191406 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr5 - 116241678 116241687 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr8 + 118127673 118127682 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr6 - 118989894 118989903 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr12 + 120530523 120530532 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr5 - 125580049 125580058 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr7 - 129214551 129214560 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr5 - 132992822 132992831 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr5 - 138704155 138704164 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr8 + 140473126 140473135 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr6 - 150132680 150132689 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr6 + 151087190 151087199 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr5 + 175559056 175559065 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr5 - 175559375 175559384 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr4 + 190112047 190112056 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr3 + 194208387 194208396 8.23e-05 0.214 gtgagctgag
M2387_1.02 SREBF1 chr1 - 204720807 204720816 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 - 226221809 226221818 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 - 229919773 229919782 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 - 230626559 230626568 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 - 235364451 235364460 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr1 - 243243589 243243598 8.23e-05 0.214 GTGAGCTGAG
M2387_1.02 SREBF1 chr12 + 122513053 122513062 8.39e-05 0.217 gtgtggtgat
M2387_1.02 SREBF1 chr1 + 25547341 25547350 9.05e-05 0.227 gtggggtggt
M2387_1.02 SREBF1 chr19 + 30426319 30426328 9.05e-05 0.227 GTGGGGGGAT
M2387_1.02 SREBF1 chr19 - 41564454 41564463 9.05e-05 0.227 GTGGGGAGAT
M2387_1.02 SREBF1 chr11 - 43402233 43402242 9.05e-05 0.227 GTGGGGAGAT
M2387_1.02 SREBF1 chr1 - 57659928 57659937 9.05e-05 0.227 GTAGGGTGAT
M2387_1.02 SREBF1 chr3 + 194208602 194208611 9.05e-05 0.227 gtggggaGAT
M2387_1.02 SREBF1 chr1 + 243243579 243243588 9.05e-05 0.227 gtggggcgat
M2387_1.02 SREBF1 chr19 + 35323593 35323602 9.14e-05 0.228 gtgatgtgag
M2387_1.02 SREBF1 chr8 - 16826342 16826351 9.3e-05 0.229 ATGGAGTGAG
M2387_1.02 SREBF1 chr22 + 39871149 39871158 9.3e-05 0.229 atggagtgag
M2387_1.02 SREBF1 chr17 + 7234580 7234589 9.39e-05 0.229 GTCACGTGAT
M2387_1.02 SREBF1 chr17 - 7234599 7234608 9.39e-05 0.229 GTCACGTGAT
M2387_1.02 SREBF1 chr19 - 40750556 40750565 9.39e-05 0.229 GTCACGTGAT
M2387_1.02 SREBF1 chr19 - 35921318 35921327 9.56e-05 0.232 GTGGGATGAT
M2387_1.02 SREBF1 chr8 - 37892403 37892412 9.56e-05 0.232 GTGGGTTGAT
M2387_1.02 SREBF1 chr9 - 33474333 33474342 9.92e-05 0.239 ATGATGTGAC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_43 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M2387_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_43 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF404.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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