Database and Motifs High-scoring Motif Occurences Debugging Information


FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]

DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
GAGWAGC 7 GAGTAGC
TAAATAAA 8 TAAATAAA
TCTCAAAA 8 TCTCAAAA
GAGTCWY 7 GAGTCTC
ACAGAGY 7 ACAGAGC
GGAYTACA 8 GGATTACA
CTGYCTCA 8 CTGCCTCA
AGBAGCTG 8 AGCAGCTG
GAVAC 5 GAGAC
RCCACCA 7 GCCACCA
CCCRGCTA 8 CCCAGCTA
AGAATSGC 8 AGAATCGC

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.244 C 0.256 G 0.256 T 0.244

SECTION I: HIGH-SCORING MOTIF OCCURENCES
Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
CTGYCTCA DREME-7 chr12 + 690210 690217 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 - 1886449 1886456 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr20 + 2647255 2647262 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 - 6404607 6404614 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 - 6990408 6990415 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 + 8078255 8078262 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr17 - 8093762 8093769 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 - 9255426 9255433 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 - 9835602 9835609 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr3 - 9938923 9938930 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 - 10103489 10103496 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr4 - 10533022 10533029 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr4 - 10533157 10533164 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 - 11319498 11319505 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 + 11533369 11533376 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr10 + 11820155 11820162 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr16 - 12062278 12062285 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 - 14227655 14227662 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 14997350 14997357 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr17 - 16406694 16406701 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 - 16406883 16406890 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 16493349 16493356 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr6 - 16726757 16726764 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 - 16734434 16734441 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 + 17108822 17108829 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 + 17109175 17109182 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 - 17740473 17740480 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr22 - 18020699 18020706 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr22 - 18149819 18149826 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr16 - 21515074 21515081 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr16 - 21572443 21572450 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr16 - 21572814 21572821 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr22 + 21666166 21666173 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr8 + 22450944 22450951 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 + 22980448 22980455 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chrX - 23771850 23771857 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 24594001 24594008 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 - 27022049 27022056 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr10 + 27154679 27154686 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 - 27181904 27181911 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 27182233 27182240 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr22 + 28680442 28680449 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr17 - 28719672 28719679 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr6 + 28894534 28894541 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr16 - 30052596 30052603 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr16 + 30499858 30499865 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr16 + 30500195 30500202 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr16 + 30642278 30642285 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr6 - 30722342 30722349 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 - 32282320 32282327 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 - 32367334 32367341 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr21 + 32695772 32695779 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr6 - 32699810 32699817 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 - 33123299 33123306 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr13 - 33247096 33247103 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 + 33821606 33821613 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 - 34234661 34234668 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 + 34235006 34235013 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr21 + 35002537 35002544 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr10 + 35197562 35197569 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 + 35323830 35323837 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 - 35331686 35331693 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 35380070 35380077 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 35380437 35380444 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 + 35386267 35386274 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 + 35964520 35964527 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 + 35964720 35964727 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 - 37160240 37160247 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr21 + 37275137 37275144 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr8 + 37892564 37892571 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 - 37918770 37918777 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 - 38766572 38766579 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr22 - 38768583 38768590 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 - 39182601 39182608 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 39720550 39720557 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 + 40301451 40301458 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr17 - 40325150 40325157 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr22 - 40625542 40625549 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr22 - 40711562 40711569 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 + 40795509 40795516 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chrX - 41216961 41216968 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr22 + 41961290 41961297 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr21 - 42149163 42149170 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 - 42215821 42215828 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr6 - 43088591 43088598 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr21 + 43905299 43905306 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr7 - 43965518 43965525 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 + 44259608 44259615 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr20 + 44880286 44880293 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr20 - 45349631 45349638 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr13 + 45367822 45367829 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr20 - 47357245 47357252 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr11 - 48021273 48021280 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 + 48866723 48866730 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr18 + 48873875 48873882 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr18 - 49439903 49439910 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr18 + 49515322 49515329 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 + 49842190 49842197 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr17 - 50795060 50795067 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 50882501 50882508 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr10 - 51074642 51074649 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 + 51371452 51371459 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 + 53370338 53370345 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 - 53550223 53550230 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 - 54185366 54185373 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 - 54185577 54185584 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 - 54185710 54185717 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr19 - 54448831 54448838 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr6 - 55579018 55579025 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr14 + 55599584 55599591 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr19 - 55672028 55672035 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 - 57075287 57075294 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 + 57258454 57258461 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr3 - 57589990 57589997 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 - 58673382 58673389 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 + 59106985 59106992 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 - 59783095 59783102 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr3 - 61732608 61732615 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 - 61838445 61838452 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr2 + 61855354 61855361 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 + 62602637 62602644 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr11 + 62840111 62840118 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr11 - 62840382 62840389 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr11 + 67122436 67122443 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr11 + 67122785 67122792 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 - 67699083 67699090 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr12 + 68807406 68807413 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr10 + 69304417 69304424 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr6 - 69982871 69982878 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr16 + 71894362 71894369 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr16 + 71894635 71894642 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr15 - 72107313 72107320 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr15 - 72107448 72107455 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr10 + 72580586 72580593 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr6 - 73254360 73254367 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr17 - 74791463 74791470 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr15 - 75217597 75217604 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr15 + 75217890 75217897 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr15 + 84570817 84570824 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 84892112 84892119 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr15 - 85471394 85471401 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 + 87285177 87285184 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr6 - 87555003 87555010 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr6 - 89778785 89778792 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr10 + 91407120 91407127 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr7 + 94110786 94110793 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 - 94418143 94418150 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 + 95920419 95920426 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr14 + 102639643 102639650 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr14 - 103576789 103576796 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 + 109425851 109425858 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 + 109801516 109801523 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 - 109939615 109939622 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 113113672 113113679 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr5 + 115311577 115311584 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 - 115971839 115971846 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr11 + 119216481 119216488 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 + 120201590 120201597 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 + 121177828 121177835 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 + 121518944 121518951 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr11 + 123279540 123279547 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr12 - 123313102 123313109 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chrX - 123770281 123770288 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 - 127023631 127023638 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chrX - 129554851 129554858 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr9 + 130700469 130700476 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr9 - 135985210 135985217 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr9 - 135999902 135999909 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr9 - 137038505 137038512 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr9 - 137189152 137189159 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr9 - 137611871 137611878 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 + 139370280 139370287 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr5 + 139490226 139490233 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr5 - 142223597 142223604 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 148409500 148409507 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr6 + 150132724 150132731 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr7 - 150366771 150366778 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr6 - 151375019 151375026 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr2 - 152208262 152208269 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 154016019 154016026 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 154016155 154016162 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chrX - 154303228 154303235 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 155575688 155575695 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 + 155575932 155575939 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr5 - 160124508 160124515 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 160300239 160300246 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr6 + 163553213 163553220 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr5 + 175559418 175559425 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr5 - 177111191 177111198 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 + 177345666 177345673 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr5 + 177345877 177345884 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr5 - 181188274 181188281 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr4 - 190112005 190112012 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 200621470 200621477 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr1 - 225654695 225654702 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 - 230796224 230796231 1.6e-05 0.0475 CTGCCTCA
CTGYCTCA DREME-7 chr1 + 240621005 240621012 1.6e-05 0.0475 ctgcctca
CTGYCTCA DREME-7 chr16 - 46623 46630 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr19 + 1886543 1886550 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr20 - 2579438 2579445 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr20 + 2579531 2579538 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr20 - 3814586 3814593 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr17 - 3951071 3951078 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr19 + 11319590 11319597 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr19 - 11533276 11533283 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr16 + 12062369 12062376 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr7 + 16420602 16420609 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 + 16493242 16493249 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 + 16493442 16493449 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 + 17227523 17227530 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr22 + 18020906 18020913 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chrX + 23771945 23771952 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chrX - 24144216 24144223 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr1 - 24593910 24593917 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr6 + 28735013 28735020 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr17 - 28952088 28952095 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr8 - 30113068 30113075 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr16 - 30500102 30500109 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr16 - 30642522 30642529 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr16 + 31037653 31037660 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr19 + 31333097 31333104 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr6 - 31755168 31755175 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr5 + 32157970 32157977 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr5 + 32158083 32158090 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr19 + 32398573 32398580 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr6 + 32699901 32699908 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr19 + 33123064 33123071 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 - 35380344 35380351 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr19 - 35386174 35386181 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr17 + 35763889 35763896 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr21 + 36123180 36123187 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 - 36159073 36159080 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr1 + 36266990 36266997 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr19 + 37160334 37160341 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr17 + 38667231 38667238 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr19 - 40103676 40103683 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr19 + 40103769 40103776 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr19 + 40301144 40301151 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr19 - 40301357 40301364 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr19 + 40567289 40567296 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr22 - 41961204 41961211 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr22 + 43019409 43019416 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr19 - 43709423 43709430 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr21 - 43905208 43905215 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr20 + 44652913 44652920 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr20 + 45349377 45349384 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr21 - 45592571 45592578 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr12 + 48866424 48866431 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr17 - 49368288 49368295 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr17 - 50459257 50459264 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr17 + 50795366 50795373 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 - 51873527 51873534 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr12 - 53370608 53370615 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr12 + 53370701 53370708 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr12 + 53550316 53550323 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr12 - 53664410 53664417 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr5 + 55463628 55463635 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr14 - 55599481 55599488 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr12 + 56220009 56220016 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr3 + 57590082 57590089 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr17 - 58673574 58673581 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr17 + 59783188 59783195 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr11 - 67122692 67122699 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr7 - 69413122 69413129 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr2 + 69950835 69950842 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr6 + 69982964 69982971 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr10 - 72580493 72580500 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr5 + 73094259 73094266 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr6 + 73461526 73461533 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr14 - 75661379 75661386 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr17 - 78251408 78251415 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr15 + 82022373 82022380 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr17 - 82030802 82030809 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr10 - 86796593 86796600 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr12 - 95735955 95735962 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr6 - 96812080 96812087 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr10 + 97635738 97635745 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr10 - 101752214 101752221 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr6 + 108155483 108155490 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr12 + 109939873 109939880 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr12 - 120291285 120291292 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr12 - 121912060 121912067 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr5 - 126819506 126819513 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr5 + 127023723 127023730 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr9 - 132357853 132357860 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr5 + 134095475 134095482 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr9 + 135999995 136000002 3.12e-05 0.0607 ctgtcTCA
CTGYCTCA DREME-7 chr5 + 139370603 139370610 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr5 - 149963296 149963303 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr7 - 151956017 151956024 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chrX + 153937188 153937195 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 + 154015712 154015719 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 + 154015899 154015906 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 - 155225328 155225335 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr1 - 155575840 155575847 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr1 + 156623026 156623033 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr5 + 160008842 160008849 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr5 - 177345786 177345793 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr5 + 177837636 177837643 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr4 + 190112098 190112105 3.12e-05 0.0607 ctgtctca
CTGYCTCA DREME-7 chr1 - 234872651 234872658 3.12e-05 0.0607 CTGTCTCA
CTGYCTCA DREME-7 chr16 + 4402721 4402728 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr16 + 12062577 12062584 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr17 + 16407005 16407012 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr17 + 19255382 19255389 6.24e-05 0.103 ctggctca
CTGYCTCA DREME-7 chr8 + 24956290 24956297 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr6 + 28585554 28585561 6.24e-05 0.103 ctgactca
CTGYCTCA DREME-7 chr19 + 38766662 38766669 6.24e-05 0.103 ctggctca
CTGYCTCA DREME-7 chr17 + 43531069 43531076 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr13 + 45367591 45367598 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr17 + 50459541 50459548 6.24e-05 0.103 ctggcTCA
CTGYCTCA DREME-7 chr12 + 51371697 51371704 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr20 + 53899819 53899826 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr19 + 54448627 54448634 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr1 + 64398489 64398496 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr1 + 67686922 67686929 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr10 + 73883256 73883263 6.24e-05 0.103 ctggctca
CTGYCTCA DREME-7 chr5 + 78738374 78738381 6.24e-05 0.103 ctggctca
CTGYCTCA DREME-7 chr15 + 96359835 96359842 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr13 + 110965382 110965389 6.24e-05 0.103 ctgactca
CTGYCTCA DREME-7 chr13 + 110965427 110965434 6.24e-05 0.103 ctgactca
CTGYCTCA DREME-7 chr13 + 110965444 110965451 6.24e-05 0.103 ctgactca
CTGYCTCA DREME-7 chr13 + 110965472 110965479 6.24e-05 0.103 ctgactca
CTGYCTCA DREME-7 chr13 + 110965489 110965496 6.24e-05 0.103 ctgactca
CTGYCTCA DREME-7 chr13 + 110965517 110965524 6.24e-05 0.103 ctgactca
CTGYCTCA DREME-7 chr13 + 114065500 114065507 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr9 + 137612016 137612023 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr5 + 171387433 171387440 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr2 + 178072606 178072613 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr5 - 1010918 1010925 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr16 - 1705590 1705597 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr19 - 6411368 6411375 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr1 - 17233477 17233484 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr17 - 17921473 17921480 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr1 - 21638897 21638904 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr12 - 25615241 25615248 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr6 - 32699853 32699860 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr21 - 35002210 35002217 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr19 - 40795195 40795202 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr19 - 44259939 44259946 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr20 - 45349303 45349310 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr19 - 49640810 49640817 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr12 - 49842359 49842366 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr1 - 67686823 67686830 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr12 - 68807227 68807234 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr6 - 73254378 73254385 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr17 - 82030467 82030474 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr11 - 86578247 86578254 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr5 - 91280614 91280621 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr9 - 98119412 98119419 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr12 - 121888562 121888569 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr9 - 130342185 130342192 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr9 - 131398279 131398286 6.24e-05 0.103 CTGGCTCA
CTGYCTCA DREME-7 chr1 - 151549023 151549030 6.24e-05 0.103 CTGACTCA
CTGYCTCA DREME-7 chr1 - 236315118 236315125 6.24e-05 0.103 CTGGCTCA
DEBUGGING INFORMATION

Command line: 

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_28 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif CTGYCTCA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings: 


  

    output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_28
    MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml
    sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
  
  

    background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF394.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background
    alphabet = DNA
    max stored scores = 100000
  
  

    allow clobber = true
    compute q-values = true
    parse genomic coord. = true
  

  

    text only = false
    scan both strands = true
    max strand = false
  

  

    threshold type = p-value
    output theshold = 0.0001
    pseudocount = 0.1
  

  

    alpha = 1
    verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.

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