# DREME 4.12.0 # command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF384-Antibody-HEK293T.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF384-Antibody-HEK293T.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF384-Antibody-HEK293T.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled # positives: 17859 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF384-Antibody-HEK293T.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered (Wed Nov 22 12:43:44 PST 2017) # negatives: 17859 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF384-Antibody-HEK293T.IDR0.05.filt.narrowPeak.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled (Wed Nov 22 12:43:44 PST 2017) # host: surya # when: Wed Nov 22 12:59:15 PST 2017 MEME version 4.12.0 ALPHABET "DNA" DNA-LIKE A "Adenine" CC0000 ~ T "Thymine" 008000 C "Cytosine" 0000CC ~ G "Guanine" FFB300 N "Any base" = ACGT X = ACGT . = ACGT V "Not T" = ACG H "Not G" = ACT D "Not C" = AGT B "Not A" = CGT M "Amino" = AC R "Purine" = AG W "Weak" = AT S "Strong" = CG Y "Pyrimidine" = CT K "Keto" = GT U = T END ALPHABET strands: + - Background letter frequencies (from dataset): A 0.291 C 0.209 G 0.206 T 0.294 MOTIF AAAAAAAA DREME-1 # Word RC Word Pos Neg P-value E-value # BEST AAAAAAAA TTTTTTTT 8399 2232 8.7e-1163 3.9e-1158 # AAAAAAAA TTTTTTTT 8399 2232 8.7e-1163 3.9e-1158 letter-probability matrix: alength= 4 w= 8 nsites= 11527 E= 3.9e-1158 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF SAGGCTGR DREME-2 # Word RC Word Pos Neg P-value E-value # BEST SAGGCTGR YCAGCCTS 3074 364 2.4e-582 1.1e-577 # CAGGCTGG CCAGCCTG 1859 85 7.3e-456 3.3e-451 # GAGGCTGA TCAGCCTC 1156 97 4.4e-238 2.0e-233 # CAGGCTGA TCAGCCTG 178 99 1.1e-006 4.9e-002 # GAGGCTGG CCAGCCTC 143 86 9.6e-005 4.3e+000 letter-probability matrix: alength= 4 w= 8 nsites= 3339 E= 1.1e-577 0.000000 0.611560 0.388440 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.400419 0.000000 0.599581 0.000000 MOTIF TGCRGTGR DREME-3 # Word RC Word Pos Neg P-value E-value # BEST TGCRGTGR YCACYGCA 2107 155 2.0e-462 8.7e-458 # TGCAGTGA TCACTGCA 1367 53 4.4e-342 2.0e-337 # TGCAGTGG CCACTGCA 1184 70 4.7e-270 2.1e-265 # TGCGGTGA TCACCGCA 93 13 2.1e-016 9.3e-012 # TGCGGTGG CCACCGCA 72 19 9.5e-009 4.2e-004 letter-probability matrix: alength= 4 w= 8 nsites= 2758 E= 8.7e-458 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.940174 0.000000 0.059826 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.542422 0.000000 0.457578 0.000000 MOTIF CYGYCTC DREME-4 # Word RC Word Pos Neg P-value E-value # BEST CYGYCTC GAGRCRG 3071 743 1.2e-370 5.6e-366 # CTGTCTC GAGACAG 1153 253 9.2e-143 4.1e-138 # CCGTCTC GAGACGG 618 75 3.0e-109 1.3e-104 # CCGCCTC GAGGCGG 682 101 4.3e-109 1.9e-104 # CTGCCTC GAGGCAG 1015 326 8.0e-086 3.6e-081 letter-probability matrix: alength= 4 w= 7 nsites= 3564 E= 5.6e-366 0.000000 1.000000 0.000000 0.000000 0.000000 0.365881 0.000000 0.634119 0.000000 0.000000 1.000000 0.000000 0.000000 0.492985 0.000000 0.507015 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTRTARTC DREME-5 # Word RC Word Pos Neg P-value E-value # BEST CTRTARTC GAYTAYAG 1568 116 4.1e-339 1.8e-334 # CTGTAATC GATTACAG 989 36 2.1e-248 9.4e-244 # CTGTAGTC GACTACAG 395 27 4.4e-086 2.0e-081 # CTATAATC GATTATAG 126 30 1.5e-015 6.6e-011 # CTATAGTC GACTATAG 60 23 2.9e-005 1.3e+000 letter-probability matrix: alength= 4 w= 8 nsites= 1571 E= 1.8e-334 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.118396 0.000000 0.881604 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.710376 0.000000 0.289624 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGYRAGAC DREME-6 # Word RC Word Pos Neg P-value E-value # BEST AGYRAGAC GTCTYRCT 1419 167 9.8e-258 4.3e-253 # AGCGAGAC GTCTCGCT 386 13 9.6e-098 4.3e-093 # AGTGAGAC GTCTCACT 465 37 9.7e-097 4.3e-092 # AGCAAGAC GTCTTGCT 503 81 9.2e-077 4.1e-072 # AGTAAGAC GTCTTACT 68 37 1.6e-003 7.1e+001 letter-probability matrix: alength= 4 w= 8 nsites= 1423 E= 4.3e-253 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.624736 0.000000 0.375264 0.401265 0.000000 0.598735 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGTAGCTG DREME-7 # Word RC Word Pos Neg P-value E-value # BEST AGTAGCTG CAGCTACT 855 39 1.5e-205 6.7e-201 # AGTAGCTG CAGCTACT 855 39 1.5e-205 6.7e-201 letter-probability matrix: alength= 4 w= 8 nsites= 856 E= 6.7e-201 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ATCTCRGC DREME-8 # Word RC Word Pos Neg P-value E-value # BEST ATCTCRGC GCYGAGAT 893 55 1.6e-200 7.0e-196 # ATCTCGGC GCCGAGAT 512 12 4.2e-136 1.9e-131 # ATCTCAGC GCTGAGAT 382 43 4.9e-070 2.2e-065 letter-probability matrix: alength= 4 w= 8 nsites= 894 E= 7.0e-196 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.427293 0.000000 0.572707 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CKTGAACC DREME-9 # Word RC Word Pos Neg P-value E-value # BEST CKTGAACC GGTTCAMG 957 90 1.2e-188 5.2e-184 # CTTGAACC GGTTCAAG 779 78 1.4e-149 6.3e-145 # CGTGAACC GGTTCACG 178 12 1.5e-039 6.7e-035 letter-probability matrix: alength= 4 w= 8 nsites= 958 E= 5.2e-184 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.185804 0.814196 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GGCRACA DREME-10 # Word RC Word Pos Neg P-value E-value # BEST GGCRACA TGTYGCC 1338 303 4.2e-162 1.8e-157 # GGCAACA TGTTGCC 916 261 1.1e-088 5.0e-084 # GGCGACA TGTCGCC 424 42 9.2e-082 4.1e-077 letter-probability matrix: alength= 4 w= 7 nsites= 1347 E= 1.8e-157 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.685226 0.000000 0.314774 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GGTGRCD DREME-11 # Word RC Word Pos Neg P-value E-value # BEST GGTGRCD HGYCACC 2190 761 1.3e-172 5.7e-168 # GGTGACA TGTCACC 576 153 6.3e-060 2.8e-055 # GGTGGCG CGCCACC 333 55 2.2e-050 9.7e-046 # GGTGGCA TGCCACC 557 199 3.8e-041 1.7e-036 # GGTGGCT AGCCACC 532 199 7.0e-037 3.1e-032 # GGTGACG CGTCACC 49 27 7.7e-003 3.4e+002 # GGTGACT AGTCACC 192 147 8.1e-003 3.6e+002 letter-probability matrix: alength= 4 w= 7 nsites= 2251 E= 5.7e-168 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.363838 0.000000 0.636162 0.000000 0.000000 1.000000 0.000000 0.000000 0.506442 0.000000 0.169258 0.324300 MOTIF CTCCTGMC DREME-12 # Word RC Word Pos Neg P-value E-value # BEST CTCCTGMC GKCAGGAG 967 137 5.9e-159 2.6e-154 # CTCCTGCC GGCAGGAG 606 78 3.4e-104 1.5e-099 # CTCCTGAC GTCAGGAG 363 59 2.4e-055 1.1e-050 letter-probability matrix: alength= 4 w= 8 nsites= 972 E= 2.6e-154 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.374486 0.625514 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GAGRTGGR DREME-13 # Word RC Word Pos Neg P-value E-value # BEST GAGRTGGR YCCAYCTC 1038 209 4.9e-137 2.2e-132 # GAGATGGA TCCATCTC 399 50 1.1e-069 4.9e-065 # GAGGTGGA TCCACCTC 328 47 9.0e-054 4.0e-049 # GAGGTGGG CCCACCTC 194 58 9.9e-019 4.4e-014 # GAGATGGG CCCATCTC 160 55 1.9e-013 8.4e-009 letter-probability matrix: alength= 4 w= 8 nsites= 1088 E= 2.2e-132 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.518382 0.000000 0.481618 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.673713 0.000000 0.326287 0.000000 MOTIF AGTGCTGG DREME-14 # Word RC Word Pos Neg P-value E-value # BEST AGTGCTGG CCAGCACT 566 77 1.1e-094 4.7e-090 # AGTGCTGG CCAGCACT 566 77 1.1e-094 4.7e-090 letter-probability matrix: alength= 4 w= 8 nsites= 569 E= 4.7e-090 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF GCCTCCCR DREME-15 # Word RC Word Pos Neg P-value E-value # BEST GCCTCCCR YGGGAGGC 553 78 8.2e-091 3.6e-086 # GCCTCCCA TGGGAGGC 480 56 1.9e-086 8.4e-082 # GCCTCCCG CGGGAGGC 73 23 1.5e-007 6.6e-003 letter-probability matrix: alength= 4 w= 8 nsites= 556 E= 3.6e-086 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.865108 0.000000 0.134892 0.000000 MOTIF GCCRGGCR DREME-16 # Word RC Word Pos Neg P-value E-value # BEST GCCRGGCR YGCCYGGC 633 135 1.1e-079 4.7e-075 # GCCGGGCG CGCCCGGC 168 18 3.9e-032 1.7e-027 # GCCAGGCG CGCCTGGC 152 21 4.2e-026 1.8e-021 # GCCAGGCA TGCCTGGC 232 69 3.1e-022 1.4e-017 # GCCGGGCA TGCCCGGC 86 28 2.3e-008 1.0e-003 letter-probability matrix: alength= 4 w= 8 nsites= 638 E= 4.7e-075 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.601881 0.000000 0.398119 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.498433 0.000000 0.501567 0.000000 MOTIF ATCRCTTG DREME-17 # Word RC Word Pos Neg P-value E-value # BEST ATCRCTTG CAAGYGAT 500 80 1.3e-076 5.9e-072 # ATCACTTG CAAGTGAT 336 72 1.4e-042 6.1e-038 # ATCGCTTG CAAGCGAT 164 8 2.0e-039 8.9e-035 letter-probability matrix: alength= 4 w= 8 nsites= 501 E= 5.9e-072 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.672655 0.000000 0.327345 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ATCHTGGC DREME-18 # Word RC Word Pos Neg P-value E-value # BEST ATCHTGGC GCCADGAT 575 128 5.2e-070 2.3e-065 # ATCTTGGC GCCAAGAT 347 57 1.3e-052 5.5e-048 # ATCCTGGC GCCAGGAT 156 41 2.2e-017 9.8e-013 # ATCATGGC GCCATGAT 74 30 9.2e-006 4.1e-001 letter-probability matrix: alength= 4 w= 8 nsites= 579 E= 2.3e-065 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.127807 0.272884 0.000000 0.599309 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGTGCART DREME-19 # Word RC Word Pos Neg P-value E-value # BEST AGTGCART AYTGCACT 476 123 5.3e-051 2.3e-046 # AGTGCAAT ATTGCACT 302 79 2.0e-032 8.6e-028 # AGTGCAGT ACTGCACT 174 44 6.9e-020 3.0e-015 letter-probability matrix: alength= 4 w= 8 nsites= 477 E= 2.3e-046 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.633124 0.000000 0.366876 0.000000 0.000000 0.000000 0.000000 1.000000 MOTIF AAAATACR DREME-20 # Word RC Word Pos Neg P-value E-value # BEST AAAATACR YGTATTTT 529 175 2.9e-043 1.3e-038 # AAAATACA TGTATTTT 493 163 2.0e-040 9.0e-036 # AAAATACG CGTATTTT 37 12 2.3e-004 1.0e+001 letter-probability matrix: alength= 4 w= 8 nsites= 533 E= 1.3e-038 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.930582 0.000000 0.069418 0.000000 MOTIF CVATTCTC DREME-21 # Word RC Word Pos Neg P-value E-value # BEST CVATTCTC GAGAATBG 495 163 8.8e-041 3.9e-036 # CGATTCTC GAGAATCG 156 8 3.6e-037 1.6e-032 # CCATTCTC GAGAATGG 176 74 4.0e-011 1.8e-006 # CAATTCTC GAGAATTG 163 81 7.6e-008 3.3e-003 letter-probability matrix: alength= 4 w= 8 nsites= 497 E= 3.9e-036 0.000000 1.000000 0.000000 0.000000 0.329980 0.356137 0.313883 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RGATCACS DREME-22 # Word RC Word Pos Neg P-value E-value # BEST RGATCACS SGTGATCY 329 75 9.9e-040 4.4e-035 # GGATCACG CGTGATCC 94 5 1.1e-022 4.7e-018 # GGATCACC GGTGATCC 130 33 3.6e-015 1.6e-010 # AGATCACG CGTGATCT 51 11 1.4e-007 6.0e-003 # AGATCACC GGTGATCT 54 26 1.1e-003 5.1e+001 letter-probability matrix: alength= 4 w= 8 nsites= 329 E= 4.4e-035 0.319149 0.000000 0.680851 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.559271 0.440729 0.000000 MOTIF CCCRGCTA DREME-23 # Word RC Word Pos Neg P-value E-value # BEST CCCRGCTA TAGCYGGG 293 60 1.4e-038 6.0e-034 # CCCAGCTA TAGCTGGG 247 49 1.7e-033 7.5e-029 # CCCGGCTA TAGCCGGG 47 11 1.0e-006 4.4e-002 letter-probability matrix: alength= 4 w= 8 nsites= 297 E= 6.0e-034 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.838384 0.000000 0.161616 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GTTTCACY DREME-24 # Word RC Word Pos Neg P-value E-value # BEST GTTTCACY RGTGAAAC 450 148 3.1e-037 1.4e-032 # GTTTCACC GGTGAAAC 268 62 3.2e-032 1.4e-027 # GTTTCACT AGTGAAAC 182 86 2.0e-009 8.7e-005 letter-probability matrix: alength= 4 w= 8 nsites= 450 E= 1.4e-032 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.595556 0.000000 0.404444 MOTIF CYGGGYTC DREME-25 # Word RC Word Pos Neg P-value E-value # BEST CYGGGYTC GARCCCRG 456 157 1.4e-035 6.0e-031 # CCGGGTTC GAACCCGG 102 6 5.5e-024 2.4e-019 # CTGGGCTC GAGCCCAG 200 74 5.8e-015 2.6e-010 # CTGGGTTC GAACCCAG 115 57 5.5e-006 2.4e-001 # CCGGGCTC GAGCCCGG 41 20 4.9e-003 2.2e+002 letter-probability matrix: alength= 4 w= 8 nsites= 459 E= 6.0e-031 0.000000 1.000000 0.000000 0.000000 0.000000 0.311547 0.000000 0.688453 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.527233 0.000000 0.472767 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 MOTIF RCAGTR DREME-26 # Word RC Word Pos Neg P-value E-value # BEST RCAGTR YACTGY 3114 2288 1.5e-034 6.5e-030 # ACAGTG CACTGT 1089 756 8.8e-016 3.9e-011 # GCAGTA TACTGC 651 415 1.1e-013 4.8e-009 # ACAGTA TACTGT 778 578 1.7e-008 7.5e-004 # GCAGTG CACTGC 808 656 2.8e-005 1.2e+000 letter-probability matrix: alength= 4 w= 6 nsites= 3411 E= 6.5e-030 0.564057 0.000000 0.435943 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.428027 0.000000 0.571973 0.000000 MOTIF CCACTAGR DREME-27 # Word RC Word Pos Neg P-value E-value # BEST CCACTAGR YCTAGTGG 272 63 1.2e-032 5.2e-028 # CCACTAGA TCTAGTGG 159 27 2.3e-024 1.0e-019 # CCACTAGG CCTAGTGG 113 36 8.6e-011 3.8e-006 letter-probability matrix: alength= 4 w= 8 nsites= 272 E= 5.2e-028 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.584559 0.000000 0.415441 0.000000 MOTIF ATBACAK DREME-28 # Word RC Word Pos Neg P-value E-value # BEST ATBACAK MTGTVAT 1642 1055 2.5e-032 1.1e-027 # ATGACAT ATGTCAT 325 152 5.5e-016 2.4e-011 # ATTACAG CTGTAAT 281 149 7.5e-011 3.3e-006 # ATTACAT ATGTAAT 353 224 3.5e-008 1.5e-003 # ATGACAG CTGTCAT 258 172 1.8e-005 7.7e-001 # ATCACAT ATGTGAT 266 191 2.4e-004 1.1e+001 # ATCACAG CTGTGAT 249 192 3.6e-003 1.6e+002 letter-probability matrix: alength= 4 w= 7 nsites= 1771 E= 1.1e-027 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.296443 0.343309 0.360248 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.449464 0.550536 MOTIF GAGDGAGA DREME-29 # Word RC Word Pos Neg P-value E-value # BEST GAGDGAGA TCTCHCTC 581 260 6.2e-030 2.7e-025 # GAGAGAGA TCTCTCTC 312 124 2.7e-020 1.2e-015 # GAGGGAGA TCTCCCTC 190 87 2.4e-010 1.1e-005 # GAGTGAGA TCTCACTC 114 55 3.2e-006 1.4e-001 letter-probability matrix: alength= 4 w= 8 nsites= 690 E= 2.7e-025 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.562319 0.000000 0.275362 0.162319 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF CYMCCACC DREME-30 # Word RC Word Pos Neg P-value E-value # BEST CYMCCACC GGTGGKRG 417 156 3.6e-029 1.6e-024 # CTCCCACC GGTGGGAG 170 50 7.1e-017 3.1e-012 # CCACCACC GGTGGTGG 112 38 5.4e-010 2.3e-005 # CCCCCACC GGTGGGGG 112 57 1.3e-005 5.9e-001 # CTACCACC GGTGGTAG 39 14 4.0e-004 1.7e+001 letter-probability matrix: alength= 4 w= 8 nsites= 425 E= 1.6e-024 0.000000 1.000000 0.000000 0.000000 0.000000 0.508235 0.000000 0.491765 0.343529 0.656471 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ATAHAT DREME-31 # Word RC Word Pos Neg P-value E-value # BEST ATAHAT ATDTAT 2754 2044 1.6e-028 6.8e-024 # ATAAAT ATTTAT 1790 1299 1.2e-020 5.3e-016 # ATACAT ATGTAT 779 601 5.7e-007 2.5e-002 # ATATAT ATATAT 429 306 2.6e-006 1.1e-001 letter-probability matrix: alength= 4 w= 6 nsites= 3171 E= 6.8e-024 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.608010 0.253232 0.000000 0.138757 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 MOTIF GTCTCGAW DREME-32 # Word RC Word Pos Neg P-value E-value # BEST GTCTCGAW WTCGAGAC 139 15 9.7e-027 4.2e-022 # GTCTCGAT ATCGAGAC 76 6 7.3e-017 3.2e-012 # GTCTCGAA TTCGAGAC 63 9 2.0e-011 8.7e-007 letter-probability matrix: alength= 4 w= 8 nsites= 139 E= 4.2e-022 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.453237 0.000000 0.000000 0.546763 MOTIF CWCACRC DREME-33 # Word RC Word Pos Neg P-value E-value # BEST CWCACRC GYGTGWG 823 473 1.5e-023 6.4e-019 # CTCACGC GCGTGAG 173 54 4.2e-016 1.8e-011 # CACACAC GTGTGTG 406 217 9.6e-015 4.1e-010 # CTCACAC GTGTGAG 237 174 1.0e-003 4.5e+001 # CACACGC GCGTGTG 84 51 2.8e-003 1.2e+002 letter-probability matrix: alength= 4 w= 7 nsites= 1012 E= 6.4e-019 0.000000 1.000000 0.000000 0.000000 0.604743 0.000000 0.000000 0.395257 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.754941 0.000000 0.245059 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AMCTCCTG DREME-34 # Word RC Word Pos Neg P-value E-value # BEST AMCTCCTG CAGGAGKT 317 126 1.4e-020 5.9e-016 # AACTCCTG CAGGAGTT 206 78 6.9e-015 3.0e-010 # ACCTCCTG CAGGAGGT 112 48 2.1e-007 9.2e-003 letter-probability matrix: alength= 4 w= 8 nsites= 318 E= 5.9e-016 1.000000 0.000000 0.000000 0.000000 0.647799 0.352201 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AGATBGCG DREME-35 # Word RC Word Pos Neg P-value E-value # BEST AGATBGCG CGCVATCT 132 27 3.6e-018 1.5e-013 # AGATGGCG CGCCATCT 71 15 3.4e-010 1.5e-005 # AGATCGCG CGCGATCT 32 3 2.1e-007 8.9e-003 # AGATTGCG CGCAATCT 29 9 8.2e-004 3.6e+001 letter-probability matrix: alength= 4 w= 8 nsites= 133 E= 1.5e-013 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.240602 0.541353 0.218045 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ADCTTTAT DREME-36 # Word RC Word Pos Neg P-value E-value # BEST ADCTTTAT ATAAAGHT 484 255 6.6e-018 2.8e-013 # AACTTTAT ATAAAGTT 256 103 1.3e-016 5.7e-012 # AGCTTTAT ATAAAGCT 130 83 7.6e-004 3.3e+001 # ATCTTTAT ATAAAGAT 103 70 7.2e-003 3.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 492 E= 2.8e-013 1.000000 0.000000 0.000000 0.000000 0.524390 0.000000 0.264228 0.211382 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 MOTIF CTCYAGCC DREME-37 # Word RC Word Pos Neg P-value E-value # BEST CTCYAGCC GGCTRGAG 247 93 1.1e-017 4.6e-013 # CTCCAGCC GGCTGGAG 147 52 4.7e-012 2.0e-007 # CTCTAGCC GGCTAGAG 100 41 3.4e-007 1.5e-002 letter-probability matrix: alength= 4 w= 8 nsites= 247 E= 4.6e-013 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.595142 0.000000 0.404858 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ATGWTGGC DREME-38 # Word RC Word Pos Neg P-value E-value # BEST ATGWTGGC GCCAWCAT 223 79 1.8e-017 7.6e-013 # ATGTTGGC GCCAACAT 166 50 4.1e-016 1.8e-011 # ATGATGGC GCCATCAT 57 29 1.7e-003 7.1e+001 letter-probability matrix: alength= 4 w= 8 nsites= 223 E= 7.6e-013 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.255605 0.000000 0.000000 0.744395 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CACCACYA DREME-39 # Word RC Word Pos Neg P-value E-value # BEST CACCACYA TRGTGGTG 195 64 5.6e-017 2.4e-012 # CACCACCA TGGTGGTG 145 45 8.0e-014 3.4e-009 # CACCACTA TAGTGGTG 52 19 5.5e-005 2.4e+000 letter-probability matrix: alength= 4 w= 8 nsites= 198 E= 2.4e-012 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.747475 0.000000 0.252525 1.000000 0.000000 0.000000 0.000000 MOTIF ACCTCYRC DREME-40 # Word RC Word Pos Neg P-value E-value # BEST ACCTCYRC GYRGAGGT 280 123 1.2e-015 5.3e-011 # ACCTCCGC GCGGAGGT 67 14 9.1e-010 3.9e-005 # ACCTCTGC GCAGAGGT 103 51 1.6e-005 7.0e-001 # ACCTCTAC GTAGAGGT 38 16 1.9e-003 8.2e+001 # ACCTCCAC GTGGAGGT 72 42 3.1e-003 1.4e+002 letter-probability matrix: alength= 4 w= 8 nsites= 280 E= 5.3e-011 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.496429 0.000000 0.503571 0.392857 0.000000 0.607143 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CCTCCYMC DREME-41 # Word RC Word Pos Neg P-value E-value # BEST CCTCCYMC GKRGGAGG 378 192 1.6e-015 7.0e-011 # CCTCCTAC GTAGGAGG 63 19 5.6e-007 2.4e-002 # CCTCCTCC GGAGGAGG 150 80 2.1e-006 9.2e-002 # CCTCCCCC GGGGGAGG 129 77 1.7e-004 7.4e+000 # CCTCCCAC GTGGGAGG 52 25 1.4e-003 6.0e+001 letter-probability matrix: alength= 4 w= 8 nsites= 388 E= 7.0e-011 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.461340 0.000000 0.538660 0.291237 0.708763 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CHGAGTAG DREME-42 # Word RC Word Pos Neg P-value E-value # BEST CHGAGTAG CTACTCDG 203 82 2.1e-013 9.2e-009 # CCGAGTAG CTACTCGG 41 4 4.6e-009 2.0e-004 # CTGAGTAG CTACTCAG 102 42 2.9e-007 1.3e-002 # CAGAGTAG CTACTCTG 60 36 9.1e-003 3.9e+002 letter-probability matrix: alength= 4 w= 8 nsites= 203 E= 9.2e-009 0.000000 1.000000 0.000000 0.000000 0.295567 0.201970 0.000000 0.502463 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF ATCATAGC DREME-43 # Word RC Word Pos Neg P-value E-value # BEST ATCATAGC GCTATGAT 85 18 6.4e-012 2.8e-007 # ATCATAGC GCTATGAT 85 18 6.4e-012 2.8e-007 letter-probability matrix: alength= 4 w= 8 nsites= 85 E= 2.8e-007 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF GCATGWGC DREME-44 # Word RC Word Pos Neg P-value E-value # BEST GCATGWGC GCWCATGC 184 76 7.0e-012 3.0e-007 # GCATGAGC GCTCATGC 107 39 7.6e-009 3.3e-004 # GCATGTGC GCACATGC 77 37 1.1e-004 4.8e+000 letter-probability matrix: alength= 4 w= 8 nsites= 184 E= 3.0e-007 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.581522 0.000000 0.000000 0.418478 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CACGY DREME-45 # Word RC Word Pos Neg P-value E-value # BEST CACGY RCGTG 1471 1143 1.5e-011 6.2e-007 # CACGT ACGTG 696 515 6.8e-008 2.9e-003 # CACGC GCGTG 807 658 3.9e-005 1.7e+000 letter-probability matrix: alength= 4 w= 5 nsites= 1557 E= 6.2e-007 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.535645 0.000000 0.464355 MOTIF ACYACAG DREME-46 # Word RC Word Pos Neg P-value E-value # BEST ACYACAG CTGTRGT 457 278 1.3e-011 5.6e-007 # ACTACAG CTGTAGT 186 92 7.9e-009 3.4e-004 # ACCACAG CTGTGGT 272 187 3.8e-005 1.6e+000 letter-probability matrix: alength= 4 w= 7 nsites= 461 E= 5.6e-007 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.594360 0.000000 0.405640 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AGCGAAAC DREME-47 # Word RC Word Pos Neg P-value E-value # BEST AGCGAAAC GTTTCGCT 84 19 2.9e-011 1.2e-006 # AGCGAAAC GTTTCGCT 84 19 2.9e-011 1.2e-006 letter-probability matrix: alength= 4 w= 8 nsites= 84 E= 1.2e-006 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CTCTACTR DREME-48 # Word RC Word Pos Neg P-value E-value # BEST CTCTACTR YAGTAGAG 123 42 9.3e-011 3.9e-006 # CTCTACTA TAGTAGAG 87 28 1.5e-008 6.4e-004 # CTCTACTG CAGTAGAG 36 14 1.3e-003 5.5e+001 letter-probability matrix: alength= 4 w= 8 nsites= 123 E= 3.9e-006 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.707317 0.000000 0.292683 0.000000 MOTIF KGAGGTCA DREME-49 # Word RC Word Pos Neg P-value E-value # BEST KGAGGTCA TGACCTCM 205 96 1.3e-010 5.6e-006 # TGAGGTCA TGACCTCA 130 54 9.4e-009 4.0e-004 # GGAGGTCA TGACCTCC 75 42 1.4e-003 6.1e+001 letter-probability matrix: alength= 4 w= 8 nsites= 206 E= 5.6e-006 0.000000 0.000000 0.364078 0.635922 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AKTAGCCA DREME-50 # Word RC Word Pos Neg P-value E-value # BEST AKTAGCCA TGGCTAMT 130 48 2.9e-010 1.2e-005 # ATTAGCCA TGGCTAAT 99 34 7.0e-009 3.0e-004 # AGTAGCCA TGGCTACT 31 14 8.0e-003 3.4e+002 letter-probability matrix: alength= 4 w= 8 nsites= 131 E= 1.2e-005 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.236641 0.763359 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GARAGAAA DREME-51 # Word RC Word Pos Neg P-value E-value # BEST GARAGAAA TTTCTYTC 702 492 3.5e-010 1.5e-005 # GAAAGAAA TTTCTTTC 559 380 1.8e-009 7.5e-005 # GAGAGAAA TTTCTCTC 161 121 9.8e-003 4.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 821 E= 1.5e-005 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.807552 0.000000 0.192448 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ARGGCGGG DREME-52 # Word RC Word Pos Neg P-value E-value # BEST ARGGCGGG CCCGCCYT 123 46 1.2e-009 5.2e-005 # AAGGCGGG CCCGCCTT 71 28 8.9e-006 3.8e-001 # AGGGCGGG CCCGCCCT 52 18 2.9e-005 1.2e+000 letter-probability matrix: alength= 4 w= 8 nsites= 123 E= 5.2e-005 1.000000 0.000000 0.000000 0.000000 0.577236 0.000000 0.422764 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CCAGHTAC DREME-53 # Word RC Word Pos Neg P-value E-value # BEST CCAGHTAC GTADCTGG 140 57 1.4e-009 5.8e-005 # CCAGTTAC GTAACTGG 59 22 2.3e-005 9.9e-001 # CCAGATAC GTATCTGG 38 15 1.1e-003 4.6e+001 # CCAGCTAC GTAGCTGG 43 20 2.6e-003 1.1e+002 letter-probability matrix: alength= 4 w= 8 nsites= 140 E= 5.8e-005 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.271429 0.307143 0.000000 0.421429 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGRGGGCG DREME-54 # Word RC Word Pos Neg P-value E-value # BEST AGRGGGCG CGCCCYCT 137 57 4.0e-009 1.7e-004 # AGAGGGCG CGCCCTCT 72 23 2.3e-007 9.7e-003 # AGGGGGCG CGCCCCCT 65 34 1.2e-003 5.0e+001 letter-probability matrix: alength= 4 w= 8 nsites= 137 E= 1.7e-004 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.525547 0.000000 0.474453 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 MOTIF AAAAAAA DREME-55 # Word RC Word Pos Neg P-value E-value # BEST AAAAAAA TTTTTTT 2399 2048 1.0e-008 4.2e-004 # AAAAAAA TTTTTTT 2399 2048 1.0e-008 4.2e-004 letter-probability matrix: alength= 4 w= 7 nsites= 2531 E= 4.2e-004 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF GGATYAC DREME-56 # Word RC Word Pos Neg P-value E-value # BEST GGATYAC GTRATCC 235 129 1.3e-008 5.4e-004 # GGATTAC GTAATCC 135 78 5.5e-005 2.3e+000 # GGATCAC GTGATCC 101 53 6.6e-005 2.8e+000 letter-probability matrix: alength= 4 w= 7 nsites= 237 E= 5.4e-004 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.426160 0.000000 0.573840 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF CYATAAA DREME-57 # Word RC Word Pos Neg P-value E-value # BEST CYATAAA TTTATRG 535 370 1.5e-008 6.5e-004 # CCATAAA TTTATGG 285 189 5.2e-006 2.2e-001 # CTATAAA TTTATAG 262 182 7.8e-005 3.3e+000 letter-probability matrix: alength= 4 w= 7 nsites= 561 E= 6.5e-004 0.000000 1.000000 0.000000 0.000000 0.000000 0.516934 0.000000 0.483066 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AAATATD DREME-58 # Word RC Word Pos Neg P-value E-value # BEST AAATATD HATATTT 977 759 4.5e-008 1.9e-003 # AAATATT AATATTT 412 308 5.1e-005 2.2e+000 # AAATATG CATATTT 324 250 1.1e-003 4.4e+001 # AAATATA TATATTT 272 217 6.9e-003 2.9e+002 letter-probability matrix: alength= 4 w= 7 nsites= 1024 E= 1.9e-003 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.270508 0.000000 0.319336 0.410156 MOTIF GTGGCGCR DREME-59 # Word RC Word Pos Neg P-value E-value # BEST GTGGCGCR YGCGCCAC 48 9 7.4e-008 3.1e-003 # GTGGCGCG CGCGCCAC 23 4 1.5e-004 6.5e+000 # GTGGCGCA TGCGCCAC 25 5 1.6e-004 6.8e+000 letter-probability matrix: alength= 4 w= 8 nsites= 48 E= 3.1e-003 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.520833 0.000000 0.479167 0.000000 MOTIF TAYRTA DREME-60 # Word RC Word Pos Neg P-value E-value # BEST TAYRTA TAYRTA 645 472 8.1e-008 3.4e-003 # TACGTA TACGTA 70 34 2.6e-004 1.1e+001 # TACATA TATGTA 417 331 8.3e-004 3.5e+001 # TATATA TATATA 167 117 1.7e-003 7.3e+001 letter-probability matrix: alength= 4 w= 6 nsites= 662 E= 3.4e-003 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.456193 0.000000 0.543807 0.607251 0.000000 0.392749 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 MOTIF ATGASTCA DREME-61 # Word RC Word Pos Neg P-value E-value # BEST ATGASTCA TGASTCAT 172 88 9.5e-008 4.0e-003 # ATGAGTCA TGACTCAT 102 41 1.7e-007 7.0e-003 # ATGACTCA TGAGTCAT 119 55 6.5e-007 2.7e-002 letter-probability matrix: alength= 4 w= 8 nsites= 173 E= 4.0e-003 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.537572 0.462428 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 MOTIF AGATCRTG DREME-62 # Word RC Word Pos Neg P-value E-value # BEST AGATCRTG CAYGATCT 120 54 2.9e-007 1.2e-002 # AGATCGTG CACGATCT 41 10 7.3e-006 3.1e-001 # AGATCATG CATGATCT 80 44 7.7e-004 3.2e+001 letter-probability matrix: alength= 4 w= 8 nsites= 122 E= 1.2e-002 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.663934 0.000000 0.336066 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 MOTIF CCATCTAS DREME-63 # Word RC Word Pos Neg P-value E-value # BEST CCATCTAS STAGATGG 103 44 6.0e-007 2.5e-002 # CCATCTAG CTAGATGG 57 26 4.3e-004 1.8e+001 # CCATCTAC GTAGATGG 46 19 5.4e-004 2.3e+001 letter-probability matrix: alength= 4 w= 8 nsites= 103 E= 2.5e-002 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.446602 0.553398 0.000000 MOTIF CGCCCAGC DREME-64 # Word RC Word Pos Neg P-value E-value # BEST CGCCCAGC GCTGGGCG 55 15 8.1e-007 3.4e-002 # CGCCCAGC GCTGGGCG 55 15 8.1e-007 3.4e-002 letter-probability matrix: alength= 4 w= 8 nsites= 57 E= 3.4e-002 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF ACAKACAC DREME-65 # Word RC Word Pos Neg P-value E-value # BEST ACAKACAC GTGTMTGT 119 56 1.0e-006 4.3e-002 # ACATACAC GTGTATGT 57 22 5.0e-005 2.1e+000 # ACAGACAC GTGTCTGT 65 34 1.2e-003 5.0e+001 letter-probability matrix: alength= 4 w= 8 nsites= 132 E= 4.3e-002 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.484848 0.515152 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 MOTIF AGTTCRAG DREME-66 # Word RC Word Pos Neg P-value E-value # BEST AGTTCRAG CTYGAACT 186 105 1.1e-006 4.5e-002 # AGTTCAAG CTTGAACT 138 82 9.3e-005 3.9e+000 # AGTTCGAG CTCGAACT 48 23 2.0e-003 8.5e+001 letter-probability matrix: alength= 4 w= 8 nsites= 186 E= 4.5e-002 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.741935 0.000000 0.258065 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 # Stopping reason: E-value threshold exceeded # Running time: 5438.61 seconds