Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAGA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.243 C 0.257 G 0.257 T 0.243


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M1968_1.02 EBF1 chr2 - 197866709 197866719 5.28e-07 0.195 TCCCTGGGGAA
M1968_1.02 EBF1 chr19 + 6886709 6886719 1.07e-06 0.195 tccctggggag
M1968_1.02 EBF1 chr5 + 159209248 159209258 1.07e-06 0.195 TCCCTGGGGAG
M1968_1.02 EBF1 chr1 - 11658064 11658074 1.87e-06 0.195 TCCCTGGGGGC
M1968_1.02 EBF1 chr1 - 93078957 93078967 2.63e-06 0.195 TCCCTGGAGAA
M1968_1.02 EBF1 chr6 + 118660297 118660307 2.63e-06 0.195 TCCCTGGAGAA
M1968_1.02 EBF1 chr19 - 13247884 13247894 3.67e-06 0.195 TCCCAGGGGAG
M1968_1.02 EBF1 chr22 - 23113161 23113171 3.67e-06 0.195 TCCCAGGGGAG
M1968_1.02 EBF1 chr15 - 81094203 81094213 4.2e-06 0.195 TCTCTGGGGAA
M1968_1.02 EBF1 chr12 + 121755669 121755679 4.46e-06 0.195 tcccaggagac
M1968_1.02 EBF1 chr19 + 11300408 11300418 5e-06 0.195 tcccagggggc
M1968_1.02 EBF1 chr20 - 58179027 58179037 5e-06 0.195 TCCCTGGAGAG
M1968_1.02 EBF1 chr4 - 6440962 6440972 5.81e-06 0.195 TCCCATGGGAC
M1968_1.02 EBF1 chr11 - 9460444 9460454 7.11e-06 0.195 TCCCTGGAGGC
M1968_1.02 EBF1 chr17 + 45836675 45836685 7.11e-06 0.195 tcccaggggga
M1968_1.02 EBF1 chr9 - 96216100 96216110 7.6e-06 0.195 TCCCATGGGAA
M1968_1.02 EBF1 chr5 + 142223869 142223879 7.6e-06 0.195 tcccttgagac
M1968_1.02 EBF1 chr16 - 19346355 19346365 7.86e-06 0.195 TCTCAGGGGAC
M1968_1.02 EBF1 chr3 + 194140767 194140777 8.9e-06 0.195 TCCCTGGGGGT
M1968_1.02 EBF1 chr4 + 1792981 1792991 9.19e-06 0.195 CCCCAGGGGAC
M1968_1.02 EBF1 chr2 - 27369708 27369718 9.73e-06 0.195 TCCCTGGAGGA
M1968_1.02 EBF1 chr20 + 62349943 62349953 9.73e-06 0.195 TCCCTGGAGGA
M1968_1.02 EBF1 chrX - 17562281 17562291 9.97e-06 0.195 TCCCTTGGGAT
M1968_1.02 EBF1 chr20 - 52294533 52294543 1.07e-05 0.195 TCTCTGGAGAC
M1968_1.02 EBF1 chr20 - 17493338 17493348 1.12e-05 0.195 TCTCTGGGGGC
M1968_1.02 EBF1 chr5 - 100903504 100903514 1.15e-05 0.195 TCCCAGGAGAG
M1968_1.02 EBF1 chr14 - 74881604 74881614 1.2e-05 0.195 TCTCTTGGGAC
M1968_1.02 EBF1 chr20 + 58179041 58179051 1.26e-05 0.195 CCCCTGGAGAC
M1968_1.02 EBF1 chr6 + 21751789 21751799 1.29e-05 0.195 cccctgggggc
M1968_1.02 EBF1 chr12 - 56636976 56636986 1.29e-05 0.195 CCCCTGGGGGC
M1968_1.02 EBF1 chr4 + 6440963 6440973 1.31e-05 0.195 tcccatgggag
M1968_1.02 EBF1 chr5 - 10288792 10288802 1.31e-05 0.195 TCCCATGGGAG
M1968_1.02 EBF1 chr3 - 16234470 16234480 1.31e-05 0.195 TCCCATGGGAG
M1968_1.02 EBF1 chr5 + 68945966 68945976 1.31e-05 0.195 tcccatgggag
M1968_1.02 EBF1 chr5 - 68945965 68945975 1.31e-05 0.195 TCCCATGGGAG
M1968_1.02 EBF1 chr1 + 230145551 230145561 1.34e-05 0.195 TCTCTGGGGAT
M1968_1.02 EBF1 chr20 - 62350340 62350350 1.36e-05 0.195 GCCCTGGGGAC
M1968_1.02 EBF1 chr5 + 139697225 139697235 1.39e-05 0.195 TCCCTGGGGCC
M1968_1.02 EBF1 chr16 - 56931175 56931185 1.42e-05 0.195 CCCCTTGGGAC
M1968_1.02 EBF1 chr21 + 26799361 26799371 1.44e-05 0.195 TCTCTGGAGaa
M1968_1.02 EBF1 chr20 - 19647179 19647189 1.47e-05 0.195 TCTCTGGGGGA
M1968_1.02 EBF1 chr1 + 36789664 36789674 1.47e-05 0.195 tctctggggga
M1968_1.02 EBF1 chr16 + 11586767 11586777 1.52e-05 0.195 TCCCAGGAGGC
M1968_1.02 EBF1 chr22 - 24806291 24806301 1.52e-05 0.195 TCCCAGGAGGC
M1968_1.02 EBF1 chr11 + 66052166 66052176 1.52e-05 0.195 TCCCAGGAGGC
M1968_1.02 EBF1 chr20 + 11891667 11891677 1.6e-05 0.201 TCTCTTGGGAA
M1968_1.02 EBF1 chr5 + 181088621 181088631 1.73e-05 0.207 tcccatggggc
M1968_1.02 EBF1 chr20 - 20102422 20102432 1.78e-05 0.207 TCCCTTGGGGG
M1968_1.02 EBF1 chr16 + 86874425 86874435 1.78e-05 0.207 tcccttggggg
M1968_1.02 EBF1 chr2 + 96638055 96638065 1.84e-05 0.207 tccctgGGGCA
M1968_1.02 EBF1 chrX + 153972237 153972247 1.86e-05 0.207 CCCCTTGGGAA
M1968_1.02 EBF1 chr12 + 66169752 66169762 1.91e-05 0.207 TCCCAGGAGAT
M1968_1.02 EBF1 chr15 + 56887508 56887518 1.96e-05 0.207 TCCCTAGGGAA
M1968_1.02 EBF1 chr1 - 24973464 24973474 1.99e-05 0.207 CCCCAGGGGAG
M1968_1.02 EBF1 chr5 + 10288793 10288803 2.04e-05 0.207 TCCCATGGGAT
M1968_1.02 EBF1 chr3 + 16234471 16234481 2.04e-05 0.207 tcccatgggat
M1968_1.02 EBF1 chr9 + 96216101 96216111 2.04e-05 0.207 tcccatgggat
M1968_1.02 EBF1 chr21 + 36735174 36735184 2.19e-05 0.215 tctcagggggc
M1968_1.02 EBF1 chr15 + 99074676 99074686 2.19e-05 0.215 tctcagggggc
M1968_1.02 EBF1 chr20 - 34294722 34294732 2.35e-05 0.221 TCCCTGGAGGT
M1968_1.02 EBF1 chr1 - 181095059 181095069 2.35e-05 0.221 TCCCTGGAGGT
M1968_1.02 EBF1 chr5 - 131165469 131165479 2.37e-05 0.221 CCCCAGGAGAC
M1968_1.02 EBF1 chr1 - 225882970 225882980 2.43e-05 0.223 CCCCAGGGGGC
M1968_1.02 EBF1 chr10 + 124208557 124208567 2.51e-05 0.225 TCTCAGGGGAT
M1968_1.02 EBF1 chr8 - 27395520 27395530 2.54e-05 0.225 GCCCAGGGGAC
M1968_1.02 EBF1 chr9 + 130951006 130951016 2.56e-05 0.225 tcccttggggt
M1968_1.02 EBF1 chr19 + 14048755 14048765 2.65e-05 0.227 ccccatgggac
M1968_1.02 EBF1 chr20 + 39832619 39832629 2.8e-05 0.227 TCTCTGGAGGC
M1968_1.02 EBF1 chr16 - 86450764 86450774 2.8e-05 0.227 TCTCTGGAGGC
M1968_1.02 EBF1 chr7 - 127256993 127257003 2.8e-05 0.227 TCTCTGGAGGC
M1968_1.02 EBF1 chr12 - 121273764 121273774 2.83e-05 0.227 ACCCTGGGGAA
M1968_1.02 EBF1 chr1 - 206416665 206416675 2.83e-05 0.227 ACCCTGGGGAA
M1968_1.02 EBF1 chr15 - 56887507 56887517 2.88e-05 0.228 TCCCTAGGGAG
M1968_1.02 EBF1 chr20 + 20904566 20904576 2.98e-05 0.233 tctcatgggaa
M1968_1.02 EBF1 chr16 - 81809299 81809309 3.09e-05 0.235 CCCCTGGAGGC
M1968_1.02 EBF1 chr19 - 14048754 14048764 3.14e-05 0.235 TCCCATGGGGG
M1968_1.02 EBF1 chr20 - 32049861 32049871 3.16e-05 0.235 TCTCTGGAGAT
M1968_1.02 EBF1 chr4 - 4733658 4733668 3.24e-05 0.235 GCCCAGGGGAA
M1968_1.02 EBF1 chr19 + 15556989 15556999 3.27e-05 0.235 tctctgggggt
M1968_1.02 EBF1 chr19 - 13526564 13526574 3.3e-05 0.235 GCCCTGGGGGC
M1968_1.02 EBF1 chr14 - 68548284 68548294 3.3e-05 0.235 GCCCTGGGGGC
M1968_1.02 EBF1 chr5 - 181088620 181088630 3.41e-05 0.237 CCCCATGGGAA
M1968_1.02 EBF1 chr1 + 234523694 234523704 3.43e-05 0.237 CCTCAGGGGAC
M1968_1.02 EBF1 chr19 - 11300176 11300186 3.49e-05 0.237 CCTCTGGGGAG
M1968_1.02 EBF1 chr22 - 25002431 25002441 3.49e-05 0.237 CCTCTGGGGAG
M1968_1.02 EBF1 chr5 - 135629526 135629536 3.58e-05 0.241 TCTCTTGGGAT
M1968_1.02 EBF1 chr15 + 72136220 72136230 3.71e-05 0.243 tctcttgagaa
M1968_1.02 EBF1 chr8 + 141101337 141101347 3.79e-05 0.243 cccctggagga
M1968_1.02 EBF1 chr21 - 36734887 36734897 3.87e-05 0.243 GCCCTGGGGAT
M1968_1.02 EBF1 chr11 - 61487604 61487614 3.87e-05 0.243 GCCCTGGGGAT
M1968_1.02 EBF1 chr2 + 15126478 15126488 3.92e-05 0.243 tctcagggggg
M1968_1.02 EBF1 chr1 - 44328039 44328049 3.98e-05 0.243 TCCCTGGGGCT
M1968_1.02 EBF1 chr5 + 100903197 100903207 3.98e-05 0.243 TCCCTGGGGCT
M1968_1.02 EBF1 chr10 + 26860437 26860447 4.11e-05 0.243 GCCCTGGGGGA
M1968_1.02 EBF1 chr15 + 56887183 56887193 4.13e-05 0.243 TCCCTGGAGCA
M1968_1.02 EBF1 chr17 - 62866641 62866651 4.13e-05 0.243 TCCCTGGAGCA
M1968_1.02 EBF1 chr1 - 224828786 224828796 4.13e-05 0.243 TCCCTGGAGCA
M1968_1.02 EBF1 chr10 - 124208278 124208288 4.21e-05 0.243 CCTCTGGAGAC
M1968_1.02 EBF1 chr3 - 169657580 169657590 4.21e-05 0.243 CCTCTGGAGAC
M1968_1.02 EBF1 chr2 - 239634792 239634802 4.21e-05 0.243 CCTCTGGAGAC
M1968_1.02 EBF1 chr1 + 12091359 12091369 4.27e-05 0.244 cctctgggggc
M1968_1.02 EBF1 chr16 - 79406290 79406300 4.37e-05 0.244 TCCTTGGGGAC
M1968_1.02 EBF1 chrX + 19329285 19329295 4.44e-05 0.244 ccccaggagag
M1968_1.02 EBF1 chr11 + 113519535 113519545 4.44e-05 0.244 gcccttgggaa
M1968_1.02 EBF1 chr4 + 6440973 6440983 4.47e-05 0.244 gctctggggac
M1968_1.02 EBF1 chr11 + 77507171 77507181 4.47e-05 0.244 GCTCTGGGGAC
M1968_1.02 EBF1 chrX - 153354593 153354603 4.58e-05 0.247 TCTCTGGGGCC
M1968_1.02 EBF1 chr20 - 20904565 20904575 4.63e-05 0.248 TCCCATGAGAT
M1968_1.02 EBF1 chr17 - 79505382 79505392 4.68e-05 0.248 GCCCAGGGGAG
M1968_1.02 EBF1 chr16 - 81720505 81720515 4.79e-05 0.251 TCCCATGAGGA
M1968_1.02 EBF1 chr11 + 65919403 65919413 4.89e-05 0.251 ACCCAGGGGAA
M1968_1.02 EBF1 chr11 - 44950964 44950974 4.94e-05 0.251 ACCCTGGGGGC
M1968_1.02 EBF1 chrX + 17562282 17562292 5e-05 0.251 tcccaagggag
M1968_1.02 EBF1 chr1 - 22318505 22318515 5e-05 0.251 CCCCTGGGGCC
M1968_1.02 EBF1 chr19 - 6971678 6971688 5.07e-05 0.251 CCTCTGGGGGA
M1968_1.02 EBF1 chr17 - 81394322 81394332 5.07e-05 0.251 CCTCTGGGGGA
M1968_1.02 EBF1 chrX + 153354969 153354979 5.07e-05 0.251 CCTCTGGGGGA
M1968_1.02 EBF1 chr16 - 53552371 53552381 5.17e-05 0.253 TCTCTTGGGGG
M1968_1.02 EBF1 chr19 + 14345587 14345597 5.31e-05 0.255 cccctggaggg
M1968_1.02 EBF1 chr2 - 239634896 239634906 5.31e-05 0.255 CCCCTGGAGGG
M1968_1.02 EBF1 chr4 + 5167678 5167688 5.43e-05 0.255 tcccaggtgac
M1968_1.02 EBF1 chr6 - 31777119 31777129 5.43e-05 0.255 GCCCAGGAGAC
M1968_1.02 EBF1 chrX + 132490065 132490075 5.48e-05 0.255 TCTCAGGGGGT
M1968_1.02 EBF1 chr4 - 1793053 1793063 5.57e-05 0.255 GCCCAGGGGGC
M1968_1.02 EBF1 chr22 + 26169522 26169532 5.57e-05 0.255 GCCCAGGGGGC
M1968_1.02 EBF1 chr20 - 32049667 32049677 5.57e-05 0.255 GCCCAGGGGGC
M1968_1.02 EBF1 chr11 - 11412968 11412978 5.78e-05 0.261 CCCCTTGAGAG
M1968_1.02 EBF1 chr2 + 218396013 218396023 5.81e-05 0.261 CCTCAGGGGAG
M1968_1.02 EBF1 chr7 - 104884333 104884343 5.83e-05 0.261 TCTCAGGAGGA
M1968_1.02 EBF1 chr6 + 41443147 41443157 5.86e-05 0.261 CCCCTTGGGGG
M1968_1.02 EBF1 chr8 + 11016356 11016366 5.91e-05 0.261 ACCCTGGGGGA
M1968_1.02 EBF1 chr5 + 135629527 135629537 5.96e-05 0.261 tcccaagagac
M1968_1.02 EBF1 chr14 - 95063676 95063686 6.22e-05 0.268 CCCCAGGAGAT
M1968_1.02 EBF1 chr8 + 97470472 97470482 6.32e-05 0.268 acccttgggaa
M1968_1.02 EBF1 chr22 + 46053607 46053617 6.35e-05 0.268 ACTCTGGGGAC
M1968_1.02 EBF1 chr19 - 8545731 8545741 6.4e-05 0.268 CCCCAGGAGGA
M1968_1.02 EBF1 chr1 - 178542815 178542825 6.4e-05 0.268 CCCCAGGAGGA
M1968_1.02 EBF1 chr17 - 62867028 62867038 6.46e-05 0.268 TCACTGGGGAC
M1968_1.02 EBF1 chr16 - 79406102 79406112 6.46e-05 0.268 TCACTGGGGAC
M1968_1.02 EBF1 chr20 + 44767143 44767153 6.67e-05 0.269 tcccaggtgaa
M1968_1.02 EBF1 chr2 + 27369880 27369890 6.83e-05 0.269 GCCCAGGGGGA
M1968_1.02 EBF1 chr20 - 52241124 52241134 6.83e-05 0.269 TCCCTGGTGGC
M1968_1.02 EBF1 chr9 + 96216184 96216194 6.83e-05 0.269 TCCCTGGTGGC
M1968_1.02 EBF1 chr1 + 236395248 236395258 6.83e-05 0.269 GCCCAGGGGGA
M1968_1.02 EBF1 chr10 + 14727531 14727541 6.86e-05 0.269 tcccaggagca
M1968_1.02 EBF1 chrX + 39508270 39508280 6.86e-05 0.269 tcccaggagca
M1968_1.02 EBF1 chr15 + 66750577 66750587 6.86e-05 0.269 tcccaggagca
M1968_1.02 EBF1 chr14 - 90396783 90396793 6.93e-05 0.269 CCTCAGGAGAC
M1968_1.02 EBF1 chr6 + 167102471 167102481 6.99e-05 0.269 ccccatgggga
M1968_1.02 EBF1 chr6 - 167102470 167102480 6.99e-05 0.269 CCCCATGGGGA
M1968_1.02 EBF1 chr1 - 184755080 184755090 7.04e-05 0.27 CCTCAGGGGGC
M1968_1.02 EBF1 chr19 + 29631421 29631431 7.15e-05 0.272 TCCTtggggag
M1968_1.02 EBF1 chr19 - 14626872 14626882 7.27e-05 0.272 GCCCTTGAGAC
M1968_1.02 EBF1 chr7 - 51001021 51001031 7.27e-05 0.272 GCCCATGGGAA
M1968_1.02 EBF1 chr1 + 198156755 198156765 7.29e-05 0.272 GCTCAGGGGAC
M1968_1.02 EBF1 chr17 + 77233867 77233877 7.48e-05 0.275 gctctggggag
M1968_1.02 EBF1 chr10 + 113742576 113742586 7.48e-05 0.275 tcccttgagcc
M1968_1.02 EBF1 chr1 + 36789911 36789921 7.5e-05 0.275 tctcaggggcc
M1968_1.02 EBF1 chr11 + 124941689 124941699 7.58e-05 0.276 cctcttgggag
M1968_1.02 EBF1 chr14 - 104846013 104846023 7.63e-05 0.276 CCCCTGGAGGT
M1968_1.02 EBF1 chr16 + 22280237 22280247 7.76e-05 0.279 GCCCTGGAGAT
M1968_1.02 EBF1 chr19 + 14345795 14345805 7.91e-05 0.279 acccaggagac
M1968_1.02 EBF1 chr15 + 72968916 72968926 7.91e-05 0.279 tccctggagct
M1968_1.02 EBF1 chr1 - 198156876 198156886 7.91e-05 0.279 TCCCTGGAGCT
M1968_1.02 EBF1 chr12 + 56636978 56636988 8.26e-05 0.284 CCCCAGGGGCC
M1968_1.02 EBF1 chr10 + 62081644 62081654 8.26e-05 0.284 gccctggagga
M1968_1.02 EBF1 chr2 + 74120170 74120180 8.26e-05 0.284 TCCCGGGGGAA
M1968_1.02 EBF1 chr1 + 24973466 24973476 8.34e-05 0.284 cccctggggcg
M1968_1.02 EBF1 chr10 - 69124224 69124234 8.34e-05 0.284 CCTCAGGAGAA
M1968_1.02 EBF1 chr19 - 16062898 16062908 8.42e-05 0.284 CCTCTGGAGGC
M1968_1.02 EBF1 chr16 + 27806556 27806566 8.42e-05 0.284 cctcaggggga
M1968_1.02 EBF1 chr17 - 73474431 73474441 8.49e-05 0.284 GCCCTTGGGAT
M1968_1.02 EBF1 chr15 - 71819879 71819889 8.54e-05 0.284 TCCTAGGGGAA
M1968_1.02 EBF1 chr1 - 93079373 93079383 8.54e-05 0.284 TCCTTGGAGAC
M1968_1.02 EBF1 chr19 + 13305303 13305313 8.67e-05 0.285 tccttgggggc
M1968_1.02 EBF1 chr6 - 31777449 31777459 8.67e-05 0.285 TCCTTGGGGGC
M1968_1.02 EBF1 chr3 - 156241052 156241062 8.73e-05 0.285 ACCCTTGGGAG
M1968_1.02 EBF1 chr3 - 72173409 72173419 8.96e-05 0.288 CCCCAGGAGGG
M1968_1.02 EBF1 chr5 - 139697189 139697199 8.96e-05 0.288 CCCCAGGAGGG
M1968_1.02 EBF1 chr10 - 18140639 18140649 9.01e-05 0.288 GCTCTGGGGGC
M1968_1.02 EBF1 chr8 + 93877150 93877160 9.01e-05 0.288 gctctgggggc
M1968_1.02 EBF1 chr16 + 81720506 81720516 9.11e-05 0.289 cctcatgggaa
M1968_1.02 EBF1 chr4 - 5167822 5167832 9.19e-05 0.289 TCCCTGAGGAC
M1968_1.02 EBF1 chr4 - 107743056 107743066 9.24e-05 0.289 TCCTTTGGGAC
M1968_1.02 EBF1 chr1 - 184754955 184754965 9.24e-05 0.289 TCCCATGAGGT
M1968_1.02 EBF1 chr16 + 56931020 56931030 9.35e-05 0.29 gcccagggggg
M1968_1.02 EBF1 chr4 - 82797253 82797263 9.52e-05 0.292 TCTCTAGGGGC
M1968_1.02 EBF1 chr19 + 15157350 15157360 9.55e-05 0.292 TCTcttgggcc
M1968_1.02 EBF1 chr1 + 224828819 224828829 9.55e-05 0.292 tctcttgggcc
M1968_1.02 EBF1 chr8 + 138817518 138817528 9.73e-05 0.295 acccaggggga
M1968_1.02 EBF1 chr16 - 86874320 86874330 9.76e-05 0.295 CCTCTGGGGGT

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_27 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M1968_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_27 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF37A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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