# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 KTKTKTGTKTGTGTGTGTGTKT MEME-1 KTKTKTGTKTGTGTGTGTGTKT 7.1e-006 9.6e-009 -18.46 0.0 155 479 92 159 0.32359 4.0e-011 239 1 CWSGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTAC MEME-2 CWSGTGATCCGCCCGCCTCGGCCTCCCAAAGTGCTGGGATTAC 4.7e-003 6.3e-006 -11.97 0.0 88 458 19 28 0.19214 2.8e-008 228 1 CAGGMTGGTCTCGAWCTCCT MEME-3 CAGGMTGGTCTCGAWCTCCT 2.5e-001 3.4e-004 -7.99 0.0 61 481 15 31 0.12682 1.4e-006 240 2 CAGGYR DREME-1 CAGGYR 1.7e-009 2.3e-012 -26.78 0.0 247 495 365 551 0.49899 9.4e-015 247 3 M0104_1.02 (ARID3B)_(Mus_musculus)_(DBD_0.99) ATATTAATWAN 4.1e0000 5.6e-003 -5.19 0.0 156 490 167 401 0.31837 2.3e-005 244 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 2.7e-002 3.7e-005 -10.21 0.0 156 492 226 533 0.31707 1.5e-007 245 3 M0108_1.02 (ARID5A)_(Mus_musculus)_(DBD_0.97) NNTAATATTKN 3.1e-002 4.2e-005 -10.07 0.0 160 490 154 333 0.32653 1.7e-007 244 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 3.8e-002 5.2e-005 -9.86 0.0 147 491 223 556 0.29939 2.1e-007 245 3 M0594_1.02 (LIN54)_(Gallus_gallus)_(DBD_0.98) DTTTRAATN 8.2e0000 1.1e-002 -4.50 0.0 144 492 166 434 0.29268 4.5e-005 245 3 M0607_1.02 KDM2B NCGNDNNNN 2.3e0000 3.2e-003 -5.76 0.0 150 492 102 233 0.30488 1.3e-005 245 3 M0629_1.02 DMRT3 MATGTATCAAN 1.4e-003 1.9e-006 -13.17 0.0 158 490 202 447 0.32245 7.8e-009 244 3 M0630_1.02 DMRT1 WWTGTWDCNW 3.0e-003 4.0e-006 -12.42 0.0 151 491 229 543 0.30754 1.7e-008 245 3 M0632_1.02 DMRTA2 HHWGTWDYNN 2.3e0000 3.1e-003 -5.78 0.0 151 491 192 481 0.30754 1.3e-005 245 3 M0633_1.02 DMRT2 KAATKTATHN 5.1e0000 6.9e-003 -4.98 0.0 123 491 147 435 0.25051 2.8e-005 245 3 M0718_1.02 FOXK1 NNRTMAACAH 1.0e-001 1.4e-004 -8.90 0.0 145 491 221 562 0.29532 5.5e-007 245 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 2.4e-003 3.3e-006 -12.63 0.0 149 489 213 504 0.30470 1.3e-008 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTMAACAA 6.3e-001 8.5e-004 -7.07 0.0 103 493 156 534 0.20892 3.5e-006 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 1.3e-001 1.7e-004 -8.67 0.0 149 491 220 548 0.30346 7.0e-007 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) NNNRTAAAYA 1.5e-003 2.0e-006 -13.12 0.0 85 491 146 537 0.17312 8.2e-009 245 3 M0756_1.02 (FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) NNHMACANN 9.2e-001 1.2e-003 -6.69 0.0 150 492 216 546 0.30488 5.1e-006 245 3 M0887_1.02 HOXA2 NNYRAYBDN 1.6e-001 2.2e-004 -8.44 0.0 140 492 128 310 0.28455 8.8e-007 245 3 M0891_1.02 TLX2 NYAAWNNNNN 4.7e-001 6.3e-004 -7.37 0.0 155 491 190 454 0.31568 2.6e-006 245 3 M0892_1.02 EMX1 VYTAATKASB 1.4e0000 1.9e-003 -6.29 0.0 91 491 130 489 0.18534 7.6e-006 245 3 M0894_1.02 LBX1 TTAATTAG 4.7e0000 6.4e-003 -5.05 0.0 149 493 173 439 0.30223 2.6e-005 246 3 M0901_1.02 AC226150.2 CWTGTCAA 2.1e0000 2.8e-003 -5.86 0.0 175 493 240 541 0.35497 1.2e-005 246 3 M0905_1.02 (HOXA4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 7.7e0000 1.0e-002 -4.56 0.0 72 492 107 504 0.14634 4.3e-005 245 3 M0937_1.02 (SIX6)_(Mus_musculus)_(DBD_1.00) HKATMYN 1.1e0000 1.5e-003 -6.53 0.0 142 494 166 429 0.28745 5.9e-006 246 3 M0943_1.02 (OTP)_(Mus_musculus)_(DBD_1.00) NYTAATTR 6.7e0000 9.1e-003 -4.70 0.0 89 493 127 501 0.18053 3.7e-005 246 3 M0949_1.02 (AC012531.1)_(Mus_musculus)_(DBD_1.00) NTAATKR 1.0e0001 1.3e-002 -4.31 0.0 82 494 121 518 0.16599 5.5e-005 246 3 M0952_1.02 (SIX2)_(Mus_musculus)_(DBD_1.00) BGATMCNN 4.7e-003 6.3e-006 -11.97 0.0 141 493 196 486 0.28600 2.6e-008 246 3 M0961_1.02 (BARHL1)_(Mus_musculus)_(DBD_1.00) NTAAWYGNN 3.3e0000 4.4e-003 -5.42 0.0 52 492 89 536 0.10569 1.8e-005 245 3 M0994_1.02 (SIX4)_(Mus_musculus)_(DBD_1.00) NYKAYMCSN 9.1e-001 1.2e-003 -6.70 0.0 160 492 224 537 0.32520 5.0e-006 245 3 M0996_1.02 (HDX)_(Mus_musculus)_(DBD_0.99) RNDATCA 1.1e-003 1.5e-006 -13.42 0.0 162 494 235 523 0.32794 6.1e-009 246 3 M1007_1.02 (HOXA11)_(Mus_musculus)_(DBD_1.00) TTWAYKDBN 3.0e0000 4.0e-003 -5.52 0.0 168 492 195 447 0.34146 1.6e-005 245 3 M1016_1.02 (SIX3)_(Mus_musculus)_(DBD_1.00) NNGATMY 6.1e-001 8.3e-004 -7.09 0.0 152 494 173 419 0.30769 3.4e-006 246 3 M1018_1.02 (HLX)_(Mus_musculus)_(DBD_1.00) YHATNNN 1.7e0000 2.3e-003 -6.07 0.0 154 494 163 391 0.31174 9.4e-006 246 3 M1027_1.02 (HOXA6)_(Mus_musculus)_(DBD_1.00) HTAATKRBN 7.9e-001 1.1e-003 -6.84 0.0 74 492 114 504 0.15041 4.4e-006 245 3 M1049_1.02 (SIX1)_(Mus_musculus)_(DBD_1.00) NYGATAYBNN 2.0e-001 2.6e-004 -8.24 0.0 155 491 224 542 0.31568 1.1e-006 245 3 M1070_1.02 (HOXC5)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 9.6e0000 1.3e-002 -4.34 0.0 116 492 159 510 0.23577 5.4e-005 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 1.5e-001 2.0e-004 -8.52 0.0 91 493 144 531 0.18458 8.1e-007 246 3 M1073_1.02 (HOXA3)_(Mus_musculus)_(DBD_1.00) HTAATKRNN 9.0e0000 1.2e-002 -4.41 0.0 90 492 130 514 0.18293 5.0e-005 245 3 M1266_1.02 (IRF6)_(Mus_musculus)_(DBD_1.00) NVNCGAWACY 5.3e-002 7.2e-005 -9.53 0.0 125 491 204 584 0.25458 3.0e-007 245 3 M1507_1.02 (LCOR)_(Meleagris_gallopavo)_(DBD_1.00) NDWTTNGGNN 3.8e-002 5.2e-005 -9.86 0.0 129 491 205 568 0.26273 2.1e-007 245 3 M1582_1.02 (HMG20B)_(Mus_musculus)_(DBD_0.94) NWAWATAATWN 8.6e-002 1.2e-004 -9.06 0.0 160 490 174 390 0.32653 4.8e-007 244 3 M1583_1.02 (BBX)_(Mus_musculus)_(DBD_0.99) TTCATTGA 6.9e0000 9.4e-003 -4.67 0.0 69 493 99 480 0.13996 3.8e-005 246 3 M1589_1.02 (SOX30)_(Mus_musculus)_(DBD_1.00) NNNNRACAAT 2.8e-001 3.9e-004 -7.86 0.0 37 491 73 550 0.07536 1.6e-006 245 3 M1592_1.02 (SOX3)_(Mus_musculus)_(DBD_1.00) NNNWCAAT 9.1e-002 1.2e-004 -9.00 0.0 63 493 104 505 0.12779 5.0e-007 246 3 M1594_1.02 (SOX12)_(Mus_musculus)_(DBD_1.00) HWTTGTYNNN 1.5e-002 2.0e-005 -10.80 0.0 149 491 231 567 0.30346 8.4e-008 245 3 M1601_1.02 (SOX11)_(Mus_musculus)_(DBD_1.00) WTTGTBNNN 5.9e-001 8.0e-004 -7.13 0.0 160 492 238 572 0.32520 3.3e-006 245 3 M1605_1.02 (SOX1)_(Mus_musculus)_(DBD_1.00) ATTSWHNNNN 1.1e-003 1.5e-006 -13.42 0.0 139 491 223 563 0.28310 6.1e-009 245 3 M1841_1.02 AR GNACABNVTGTTCYY 5.9e0000 8.0e-003 -4.83 0.0 140 486 198 537 0.28807 3.3e-005 242 3 M1863_1.02 FOXD1 GTAAACAW 1.4e0000 1.9e-003 -6.28 0.0 149 493 192 484 0.30223 7.6e-006 246 3 M1868_1.02 GATA2 DSAGATAAGAANYH 1.4e-001 1.9e-004 -8.58 0.0 77 487 117 477 0.15811 7.7e-007 243 3 M1882_1.02 IRF1 RAAVNGAAAGTGAAASYRRRN 2.3e-008 3.2e-011 -24.18 0.0 132 480 185 417 0.27500 1.3e-013 239 3 M1884_1.02 MEF2A DKCYAAAAATAGMHH 6.4e0000 8.6e-003 -4.75 0.0 146 486 151 380 0.30041 3.6e-005 242 3 M1925_1.02 CEBPA DRTTRTGCAAT 1.2e-002 1.6e-005 -11.06 0.0 126 490 168 453 0.25714 6.4e-008 244 3 M2267_1.02 CDX2 TTTTATKRCHB 2.1e0000 2.9e-003 -5.86 0.0 76 490 102 439 0.15510 1.2e-005 244 3 M2268_1.02 CEBPB KATTGCAYMAY 1.2e0000 1.6e-003 -6.41 0.0 114 490 139 426 0.23265 6.7e-006 244 3 M2281_1.02 FOXH1 BNSAATCCACA 4.2e-001 5.6e-004 -7.48 0.0 120 490 158 462 0.24490 2.3e-006 244 3 M2283_1.02 FOXP1 MWWADGTAAACAAAR 9.9e-003 1.3e-005 -11.22 0.0 138 486 186 467 0.28395 5.6e-008 242 3 M2296_1.02 MAFK MHDASTCAGCAWWWW 7.1e-003 9.6e-006 -11.55 0.0 94 486 137 458 0.19342 4.0e-008 242 3 M2306_1.02 POU2F2 NDNATTTGCATRW 9.3e-004 1.3e-006 -13.59 0.0 154 488 175 383 0.31557 5.2e-009 243 3 M2307_1.02 PRDM1 DRAAAGTGAAAGTGR 2.5e-007 3.4e-010 -21.82 0.0 138 486 222 519 0.28395 1.4e-012 242 3 M2319_1.02 TCF7L2 KBYCTTTGAWSTBN 6.8e-002 9.1e-005 -9.30 0.0 139 487 202 522 0.28542 3.8e-007 243 3 M4452_1.02 BATF TYYYRDWATGASTCA 2.1e-002 2.9e-005 -10.45 0.0 98 486 144 476 0.20165 1.2e-007 242 3 M4453_1.02 BCL11A ADGRGGAASTGARAV 2.2e-002 3.0e-005 -10.40 0.0 108 486 177 557 0.22222 1.3e-007 242 3 M4463_1.02 IRF4 DNWSNGGAAVTGAVWSWN 5.5e-004 7.4e-007 -14.12 0.0 137 483 221 553 0.28364 3.1e-009 241 3 M4467_1.02 MEF2C NDKCYAAAAATAGMH 6.9e-003 9.4e-006 -11.58 0.0 142 486 183 443 0.29218 3.9e-008 242 3 M4471_1.02 PAX5 BCAGYSRAGCGTGAC 7.9e0000 1.1e-002 -4.54 0.0 202 486 272 543 0.41564 4.4e-005 242 3 M4477_1.02 SRF NNRTGNCCAWAWAAGGMMA 1.0e0000 1.4e-003 -6.60 0.0 142 482 173 438 0.29461 5.7e-006 240 3 M4509_1.02 POU5F1 ATYTGCATRACAAWGRV 5.9e-003 8.0e-006 -11.74 0.0 122 484 147 388 0.25207 3.3e-008 241 3 M4545_1.02 ZNF683 DRAAAGTGAAAGTGV 1.1e-005 1.5e-008 -18.02 0.0 138 486 219 525 0.28395 6.2e-011 242 3 M4567_1.02 FOXA2 VCWRWGTAAACANNN 2.2e-003 3.0e-006 -12.73 0.0 118 486 180 508 0.24280 1.2e-008 242 3 M4635_1.02 STAT2 GAAANYGAAACTDAA 1.5e-003 2.1e-006 -13.08 0.0 138 486 193 476 0.28395 8.6e-009 242 3 M4702_1.02 NR2F2 TGACCTTT 6.3e-001 8.5e-004 -7.06 0.0 163 493 246 585 0.33063 3.5e-006 246 3 M4708_1.02 TBP TATGCAAATA 1.8e-002 2.4e-005 -10.64 0.0 153 491 191 444 0.31161 9.8e-008 245 3 M4850_1.02 (TCF15)_(Drosophila_melanogaster)_(DBD_0.70) TKTWRTNKBBDYDMCATSTGK 3.6e0000 4.8e-003 -5.33 0.0 110 480 156 502 0.22917 2.0e-005 239 3 M5287_1.02 ALX4 HTAATYNAATTAN 4.1e-001 5.5e-004 -7.50 0.0 140 488 161 409 0.28689 2.3e-006 243 3 M5291_1.02 ARX YTAATTNRATTAN 1.9e0000 2.6e-003 -5.95 0.0 140 488 144 368 0.28689 1.1e-005 243 3 M5294_1.02 BARHL2 NHTAAAYGNY 2.0e0000 2.8e-003 -5.89 0.0 37 491 66 501 0.07536 1.1e-005 245 3 M5300_1.02 BARX1 TAATBGNTWTTTAATBG 3.3e-004 4.4e-007 -14.63 0.0 154 484 148 306 0.31818 1.8e-009 241 3 M5307_1.02 BHLHE22 NAVCATATGKTT 4.2e-001 5.7e-004 -7.48 0.0 165 489 124 260 0.33742 2.3e-006 244 3 M5322_1.02 CPEB1 YTTTTATY 6.5e-003 8.8e-006 -11.64 0.0 151 493 206 487 0.30629 3.6e-008 246 3 M5335_1.02 CUX2 ATCGATAHNDTTATYGAT 3.4e0000 4.6e-003 -5.38 0.0 145 483 47 92 0.30021 1.9e-005 241 3 M5343_1.02 DLX5 NTAATTRN 9.4e0000 1.3e-002 -4.36 0.0 91 493 120 462 0.18458 5.2e-005 246 3 M5345_1.02 DMBX1 NHTAATCCBN 2.4e-001 3.2e-004 -8.04 0.0 61 491 107 543 0.12424 1.3e-006 245 3 M5346_1.02 DPRX SHTAATCCBN 9.6e0000 1.3e-002 -4.34 0.0 159 491 218 538 0.32383 5.3e-005 245 3 M5348_1.02 DRGX NTAATYHAATTAN 9.1e-001 1.2e-003 -6.70 0.0 140 488 145 366 0.28689 5.1e-006 243 3 M5388_1.02 EMX2 VYTAATTAVB 5.6e-001 7.6e-004 -7.18 0.0 91 491 113 404 0.18534 3.1e-006 245 3 M5435_1.02 FOXB1 TCGCYGTGTCATTC 1.0e0000 1.4e-003 -6.59 0.0 123 487 137 385 0.25257 5.7e-006 243 3 M5445_1.02 FOXD2 DRTMAATATTWDYD 1.1e0000 1.5e-003 -6.47 0.0 161 487 167 380 0.33060 6.4e-006 243 3 M5446_1.02 FOXD4L2 GTAAACA 6.8e-001 9.1e-004 -7.00 0.0 146 494 214 554 0.29555 3.7e-006 246 3 M5460_1.02 FOXL1 RTAAACA 2.9e0000 3.9e-003 -5.55 0.0 146 494 184 477 0.29555 1.6e-005 246 3 M5500_1.02 GSC VYTAATCCSH 5.0e-002 6.7e-005 -9.61 0.0 127 491 186 516 0.25866 2.7e-007 245 3 M5501_1.02 GSC2 NYTAATCCBH 1.5e-003 2.0e-006 -13.11 0.0 121 491 192 537 0.24644 8.2e-009 245 3 M5530_1.02 HOMEZ TWTAATCGTTTT 3.0e-001 4.1e-004 -7.79 0.0 159 489 182 419 0.32515 1.7e-006 244 3 M5543_1.02 HOXB5 NNTAATKRNN 3.0e0000 4.0e-003 -5.52 0.0 81 491 125 527 0.16497 1.6e-005 245 3 M5544_1.02 HOXC10 DTTTWATKGB 4.1e0000 5.6e-003 -5.18 0.0 71 491 105 494 0.14460 2.3e-005 245 3 M5547_1.02 HOXC11 DGTCGTWAAAH 4.7e0000 6.3e-003 -5.06 0.0 98 490 126 449 0.20000 2.6e-005 244 3 M5551_1.02 HOXC12 TTTTATTRC 1.3e-001 1.7e-004 -8.68 0.0 72 492 111 485 0.14634 6.9e-007 245 3 M5553_1.02 HOXC13 CYAATAAAAH 4.1e-001 5.6e-004 -7.49 0.0 153 491 189 456 0.31161 2.3e-006 245 3 M5557_1.02 HOXD12 GTAATAAAA 3.5e-001 4.8e-004 -7.65 0.0 152 492 197 481 0.30894 1.9e-006 245 3 M5563_1.02 HOXD8 VHWAATTARV 5.4e-001 7.3e-004 -7.23 0.0 145 491 202 519 0.29532 3.0e-006 245 3 M5568_1.02 HSFY2 TTCGAAHVRTTCGAA 4.5e-001 6.2e-004 -7.39 0.0 160 486 161 361 0.32922 2.5e-006 242 3 M5583_1.02 ISL2 YTAAKTGC 1.8e-001 2.5e-004 -8.31 0.0 73 493 125 558 0.14807 1.0e-006 246 3 M5584_1.02 ISX YTAATCTAATTAV 3.1e-001 4.3e-004 -7.76 0.0 150 488 110 244 0.30738 1.7e-006 243 3 M5604_1.02 LMX1A YTAATTAA 1.7e0000 2.3e-003 -6.06 0.0 91 493 118 437 0.18458 9.5e-006 246 3 M5605_1.02 LMX1B TTAATTRN 1.9e-001 2.6e-004 -8.27 0.0 125 493 174 495 0.25355 1.0e-006 246 3 M5621_1.02 MEIS3 SCTGTCAH 3.5e-001 4.8e-004 -7.65 0.0 55 493 104 586 0.11156 1.9e-006 246 3 M5624_1.02 MEOX2 NSTAATTAWN 2.0e0000 2.8e-003 -5.89 0.0 91 491 129 486 0.18534 1.1e-005 245 3 M5643_1.02 MYBL1 RCCGTTAAACBG 2.3e-001 3.1e-004 -8.09 0.0 173 489 190 404 0.35378 1.3e-006 244 3 M5697_1.02 ONECUT3 DTTATYGATTTTTY 3.8e-003 5.2e-006 -12.17 0.0 93 487 104 325 0.19097 2.1e-008 243 3 M5705_1.02 PAX4 YTAATTAG 2.1e0000 2.9e-003 -5.84 0.0 157 493 185 446 0.31846 1.2e-005 246 3 M5714_1.02 PHOX2A TAATYYAATTA 2.7e0000 3.7e-003 -5.60 0.0 148 490 156 387 0.30204 1.5e-005 244 3 M5715_1.02 PHOX2B TAATBYAATTA 1.5e0000 2.0e-003 -6.23 0.0 140 490 154 396 0.28571 8.1e-006 244 3 M5729_1.02 POU2F3 ATTWGCATA 8.6e-003 1.2e-005 -11.37 0.0 152 492 197 461 0.30894 4.7e-008 245 3 M5735_1.02 POU3F3 WAATTWGCATAWW 1.0e-002 1.4e-005 -11.16 0.0 150 488 168 383 0.30738 5.8e-008 243 3 M5738_1.02 POU3F4 ATTWGCATA 2.3e-003 3.1e-006 -12.69 0.0 152 492 164 365 0.30894 1.3e-008 245 3 M5740_1.02 POU4F1 ATGMATAATTAATG 9.5e-001 1.3e-003 -6.65 0.0 141 487 141 352 0.28953 5.3e-006 243 3 M5743_1.02 POU4F3 RTGMATWATTAATGAV 1.9e0000 2.6e-003 -5.97 0.0 95 485 101 343 0.19588 1.1e-005 242 3 M5744_1.02 POU5F1B ATTWGCATA 5.0e-004 6.8e-007 -14.21 0.0 118 492 167 461 0.23984 2.8e-009 245 3 M5746_1.02 POU6F2 WTAATKAGST 1.1e0000 1.5e-003 -6.48 0.0 153 491 179 433 0.31161 6.3e-006 245 3 M5782_1.02 RHOXF1 GGATDAKCC 1.4e0000 1.9e-003 -6.24 0.0 154 492 202 498 0.31301 7.9e-006 245 3 M5815_1.02 SOX14 ACAATAMCATTG 7.1e0000 9.6e-003 -4.65 0.0 179 489 108 216 0.36605 4.0e-005 244 3 M5865_1.02 SPIC NAAAAGVGGAAGTA 5.7e0000 7.7e-003 -4.86 0.0 127 487 182 536 0.26078 3.2e-005 243 3 M5875_1.02 TBX1 AGGTGTGAAAAAAGGTGTGA 1.6e-004 2.1e-007 -15.37 0.0 159 481 105 193 0.33056 8.8e-010 240 3 M5882_1.02 TBX19 DTTMRCACVTAGGTGTGAAW 2.7e0000 3.7e-003 -5.60 0.0 51 481 41 195 0.10603 1.5e-005 240 3 M5945_1.02 VAX2 YTAATTAB 8.9e0000 1.2e-002 -4.41 0.0 91 493 128 498 0.18458 5.0e-005 246 3 M5981_1.02 ZSCAN4 TTTTCAGKGTGTGCA 1.8e0000 2.4e-003 -6.03 0.0 136 486 113 284 0.27984 9.9e-006 242 3 M6111_1.02 (ZNF652)_(Mus_musculus)_(DBD_1.00) NBAAAGGGTTAAH 3.8e-003 5.1e-006 -12.19 0.0 158 488 137 284 0.32377 2.1e-008 243 3 M6114_1.02 FOXA1 WAWGYAAAYA 1.2e0000 1.6e-003 -6.42 0.0 117 491 164 507 0.23829 6.7e-006 245 3 M6140_1.02 AIRE HTTGGWWWWAWTGGDTWH 6.0e-003 8.1e-006 -11.72 0.0 149 483 212 500 0.30849 3.4e-008 241 3 M6141_1.02 ALX1 TAATBYAATTAB 3.6e-003 4.9e-006 -12.22 0.0 133 489 170 430 0.27198 2.0e-008 244 3 M6147_1.02 ARID3A TWWAWTTTGATWYYVWTTAATH 4.7e-005 6.3e-008 -16.58 0.0 149 479 135 274 0.31106 2.6e-010 239 3 M6149_1.02 ARID5B DBYKDGTATTSKR 9.9e0000 1.3e-002 -4.31 0.0 18 488 39 534 0.03689 5.6e-005 243 3 M6157_1.02 BARX2 TYRWTAATKR 3.5e-001 4.7e-004 -7.66 0.0 87 491 117 438 0.17719 1.9e-006 245 3 M6163_1.02 BPTF KKTBTTGTKKKS 2.7e-001 3.6e-004 -7.92 0.0 109 489 172 554 0.22290 1.5e-006 244 3 M6166_1.02 CDC5L RWTAYRTTAAMWCVC 2.1e0000 2.8e-003 -5.87 0.0 100 486 118 398 0.20576 1.2e-005 242 3 M6171_1.02 CEBPD RRTKDBGCAAT 2.1e-002 2.9e-005 -10.46 0.0 108 490 172 542 0.22041 1.2e-007 244 3 M6173_1.02 CEBPG VAGATTGCAHAAT 3.3e-002 4.5e-005 -10.00 0.0 114 488 160 474 0.23361 1.9e-007 243 3 M6182_1.02 CRX YTAATCYB 2.5e-001 3.3e-004 -8.00 0.0 127 493 190 544 0.25761 1.4e-006 246 3 M6185_1.02 CXXC1 CGKTGKY 5.3e-001 7.2e-004 -7.23 0.0 190 494 282 592 0.38462 2.9e-006 246 3 M6188_1.02 DLX2 ATAATTRB 4.2e0000 5.6e-003 -5.18 0.0 173 493 153 331 0.35091 2.3e-005 246 3 M6206_1.02 ELF5 AHMAGGAWRTW 1.2e0000 1.6e-003 -6.45 0.0 140 490 213 575 0.28571 6.5e-006 244 3 M6223_1.02 ETV5 GHCAGGAAGWWAY 4.2e0000 5.6e-003 -5.18 0.0 162 488 244 592 0.33197 2.3e-005 243 3 M6225_1.02 MECOM DAGAYAAGATAANAKA 2.5e0000 3.4e-003 -5.68 0.0 145 485 147 363 0.29897 1.4e-005 242 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 4.3e-001 5.9e-004 -7.44 0.0 116 488 165 502 0.23770 2.4e-006 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 3.3e0000 4.4e-003 -5.42 0.0 114 486 125 380 0.23457 1.8e-005 242 3 M6236_1.02 FOXC2 YCTRDSWAAACAAAC 4.0e-002 5.4e-005 -9.83 0.0 92 486 113 379 0.18930 2.2e-007 242 3 M6237_1.02 FOXD3 AAACAAACA 6.3e0000 8.6e-003 -4.76 0.0 156 492 207 515 0.31707 3.5e-005 245 3 M6238_1.02 FOXF1 WAAATAAACAW 6.6e-001 8.9e-004 -7.02 0.0 146 490 183 460 0.29796 3.7e-006 244 3 M6239_1.02 FOXF2 HWADGTAAACA 4.1e-002 5.5e-005 -9.81 0.0 142 490 183 456 0.28980 2.3e-007 244 3 M6242_1.02 FOXJ3 TAAACAWWAAMMA 2.8e-004 3.8e-007 -14.78 0.0 146 488 168 378 0.29918 1.6e-009 243 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 1.7e-003 2.3e-006 -12.99 0.0 118 488 190 543 0.24180 9.4e-009 243 3 M6245_1.02 FOXO1 AAVWHVWAAACAAVHH 1.1e-003 1.5e-006 -13.38 0.0 143 485 204 488 0.29485 6.4e-009 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 1.2e-001 1.7e-004 -8.70 0.0 148 488 212 524 0.30328 6.8e-007 243 3 M6249_1.02 FOXP3 AAWCAMATT 3.9e-002 5.3e-005 -9.85 0.0 150 492 211 514 0.30488 2.2e-007 245 3 M6250_1.02 FOXQ1 AAATAAACAATD 3.8e0000 5.1e-003 -5.27 0.0 147 489 144 355 0.30061 2.1e-005 244 3 M6251_1.02 FUBP1 TYGTNTTTTTTT 3.7e-004 5.1e-007 -14.50 0.0 135 489 212 538 0.27607 2.1e-009 244 3 M6256_1.02 GATA4 RSWGATAAV 3.6e0000 4.9e-003 -5.32 0.0 138 492 201 556 0.28049 2.0e-005 245 3 M6257_1.02 GATA5 WVANWGATAABTYRRHK 1.3e-001 1.8e-004 -8.64 0.0 156 484 203 473 0.32231 7.4e-007 241 3 M6268_1.02 HAND1 AAWKCCAGAYVC 3.6e0000 4.9e-003 -5.32 0.0 137 489 208 577 0.28016 2.0e-005 244 3 M6279_1.02 HMGA1 AAAATWN 4.9e-004 6.6e-007 -14.23 0.0 144 494 218 531 0.29150 2.7e-009 246 3 M6280_1.02 HMGA2 AATWWYSSSSAATAT 5.3e0000 7.2e-003 -4.93 0.0 118 486 99 282 0.24280 3.0e-005 242 3 M6281_1.02 HNF1A KGKTAAWBATTAACY 8.3e-001 1.1e-003 -6.79 0.0 142 486 154 386 0.29218 4.7e-006 242 3 M6282_1.02 HNF1B GTTAAWYATTAACY 1.5e0000 2.0e-003 -6.21 0.0 139 487 164 428 0.28542 8.3e-006 243 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 6.2e-003 8.4e-006 -11.69 0.0 117 487 143 394 0.24025 3.5e-008 243 3 M6287_1.02 HSF2 VGAABRTTCTAGAA 4.6e0000 6.2e-003 -5.08 0.0 159 487 225 549 0.32649 2.6e-005 243 3 M6289_1.02 HOXA9 WCATAAAYYRTM 5.7e-001 7.7e-004 -7.17 0.0 75 489 106 447 0.15337 3.2e-006 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 4.2e-001 5.8e-004 -7.46 0.0 136 486 86 198 0.27984 2.4e-006 242 3 M6300_1.02 HOXC8 GSSHATYAATSAAR 2.1e0000 2.8e-003 -5.88 0.0 97 487 128 454 0.19918 1.1e-005 243 3 M6301_1.02 HOXD10 AATTAAAGCA 1.4e-001 1.8e-004 -8.60 0.0 143 491 196 499 0.29124 7.5e-007 245 3 M6303_1.02 HOXD4 TTAATTGW 4.3e0000 5.8e-003 -5.14 0.0 115 493 158 503 0.23327 2.4e-005 246 3 M6304_1.02 HOXD9 HMATNAAWYT 1.2e0000 1.6e-003 -6.43 0.0 163 491 194 448 0.33198 6.6e-006 245 3 M6308_1.02 IRF2 SGAAAGYGAAASYV 2.7e-003 3.7e-006 -12.50 0.0 137 487 197 495 0.28131 1.5e-008 243 3 M6309_1.02 IRF3 GGAAAGBGAAASBRRRA 5.1e-003 7.0e-006 -11.88 0.0 144 484 212 516 0.29752 2.9e-008 241 3 M6311_1.02 IRF5 KAAAGGRAARCMAAAWSWGA 1.4e-005 1.9e-008 -17.78 0.0 145 481 114 223 0.30146 7.9e-011 240 3 M6312_1.02 IRF7 GAAASYGAAA 1.9e-003 2.5e-006 -12.90 0.0 135 491 218 567 0.27495 1.0e-008 245 3 M6313_1.02 IRF8 GRGRAAVTGAAASYR 2.6e-004 3.5e-007 -14.87 0.0 142 486 229 557 0.29218 1.4e-009 242 3 M6314_1.02 IRF9 GAAAGCGAAAYT 9.7e-001 1.3e-003 -6.64 0.0 145 489 151 373 0.29652 5.4e-006 244 3 M6328_1.02 LHX2 YRSDTKYAATWAG 3.3e0000 4.5e-003 -5.40 0.0 130 488 144 398 0.26639 1.9e-005 243 3 M6329_1.02 LHX3 AAAATTAATTARY 2.9e-001 4.0e-004 -7.83 0.0 150 488 131 300 0.30738 1.6e-006 243 3 M6344_1.02 MEIS2 KGACAVCTGTCAA 1.1e0000 1.5e-003 -6.52 0.0 74 488 94 395 0.15164 6.1e-006 243 3 M6347_1.02 MSX2 TAATTNK 6.8e-001 9.2e-004 -6.99 0.0 144 494 200 521 0.29150 3.7e-006 246 3 M6349_1.02 MYBL2 WYAACCKSBA 7.3e0000 9.9e-003 -4.62 0.0 157 491 229 573 0.31976 4.0e-005 245 3 M6363_1.02 NFATC2 RWTTTTCCA 1.4e0000 1.9e-003 -6.25 0.0 76 492 129 577 0.15447 7.9e-006 245 3 M6365_1.02 NFATC4 WMDTTTTCCH 4.2e-002 5.7e-005 -9.77 0.0 117 491 190 570 0.23829 2.3e-007 245 3 M6366_1.02 NFAT5 MAKGRANTTTTCCRS 9.1e-001 1.2e-003 -6.69 0.0 184 486 219 455 0.37860 5.1e-006 242 3 M6370_1.02 NFKB2 GRAATBYCCCT 9.0e0000 1.2e-002 -4.41 0.0 136 490 200 565 0.27755 5.0e-005 244 3 M6378_1.02 NKX3-1 WWTAAGTATWTWW 1.3e-003 1.8e-006 -13.23 0.0 142 488 171 401 0.29098 7.4e-009 243 3 M6391_1.02 NR2E3 TGACTTTTGACTTT 2.8e-003 3.8e-006 -12.48 0.0 127 487 192 515 0.26078 1.6e-008 243 3 M6392_1.02 NR2F6 YYMNNTGAMCTTTGWCCY 8.4e-004 1.1e-006 -13.68 0.0 133 483 212 542 0.27536 4.7e-009 241 3 M6399_1.02 ONECUT2 DKSWTKWTATKGATTTTWYYT 2.2e-002 3.0e-005 -10.42 0.0 148 480 123 266 0.30833 1.2e-007 239 3 M6401_1.02 OTX2 VYYTAATCCBWKHDM 3.2e-004 4.4e-007 -14.64 0.0 144 486 199 467 0.29630 1.8e-009 242 3 M6406_1.02 PAX2 RHKCAGTSAYGMGTGAYW 3.9e-002 5.3e-005 -9.85 0.0 139 483 195 494 0.28778 2.2e-007 241 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 3.2e-001 4.3e-004 -7.75 0.0 92 486 134 484 0.18930 1.8e-006 242 3 M6423_1.02 POU2F1 ATTTGCATD 1.5e-005 2.0e-008 -17.71 0.0 116 492 193 537 0.23577 8.3e-011 245 3 M6425_1.02 POU3F1 HTTGCATWWSMATB 1.8e-005 2.5e-008 -17.51 0.0 109 487 166 469 0.22382 1.0e-010 243 3 M6426_1.02 POU3F2 CATRAATWWT 7.2e0000 9.8e-003 -4.62 0.0 97 491 136 499 0.19756 4.0e-005 245 3 M6427_1.02 POU4F2 MARCTCATTAATR 8.1e-001 1.1e-003 -6.81 0.0 92 488 108 379 0.18852 4.5e-006 243 3 M6429_1.02 POU6F1 CATAAWTTATGCR 3.9e-001 5.3e-004 -7.54 0.0 156 488 100 211 0.31967 2.2e-006 243 3 M6438_1.02 PROP1 RASHAATTAAHATVR 1.2e-003 1.7e-006 -13.29 0.0 150 486 197 451 0.30864 7.0e-009 242 3 M6439_1.02 PRRX1 TAAYCTG 5.0e0000 6.7e-003 -5.00 0.0 128 494 174 510 0.25911 2.7e-005 246 3 M6470_1.02 SOX10 BCWTTGT 1.7e0000 2.3e-003 -6.06 0.0 150 494 223 575 0.30364 9.5e-006 246 3 M6471_1.02 SOX13 YATTGTTY 4.8e-001 6.4e-004 -7.35 0.0 159 493 219 522 0.32252 2.6e-006 246 3 M6474_1.02 SOX18 GGAMRAVAACAAWKBDWDS 3.0e-001 4.1e-004 -7.80 0.0 132 482 170 453 0.27386 1.7e-006 240 3 M6475_1.02 SOX2 WTTTGCATRACAAWGG 3.8e-001 5.1e-004 -7.58 0.0 121 485 163 472 0.24948 2.1e-006 242 3 M6478_1.02 SOX9 ARAACAATGGR 1.7e0000 2.3e-003 -6.09 0.0 126 490 169 491 0.25714 9.3e-006 244 3 M6485_1.02 SPIB ARAAASMGGAAS 1.4e0000 1.9e-003 -6.28 0.0 139 489 205 554 0.28425 7.7e-006 244 3 M6490_1.02 SRY DAAACAAWR 2.9e-001 3.9e-004 -7.84 0.0 32 492 65 543 0.06504 1.6e-006 245 3 M6503_1.02 TBX2 GKSRCDBYTCACACCTVTGWDKBCA 6.4e0000 8.7e-003 -4.74 0.0 142 476 148 374 0.29832 3.7e-005 237 3 M6504_1.02 TBX3 AGKWAGRSAMTTAGGTSWKAARAA 7.2e-002 9.8e-005 -9.23 0.0 81 477 74 248 0.16981 4.1e-007 238 3 M6506_1.02 TCF7 VHSCTTTGWWST 9.1e-001 1.2e-003 -6.70 0.0 157 489 232 564 0.32106 5.0e-006 244 3 M6507_1.02 TEAD1 YACATTCCWSMKSH 2.4e-002 3.3e-005 -10.32 0.0 97 487 161 552 0.19918 1.4e-007 243 3 M6508_1.02 TEAD3 GAHATTYYWGCYBYW 5.3e-003 7.2e-006 -11.84 0.0 190 486 259 507 0.39095 3.0e-008 242 3 M6509_1.02 TEAD4 AAAAAYAKCYCT 1.8e0000 2.4e-003 -6.03 0.0 141 489 174 455 0.28834 9.9e-006 244 3 M6510_1.02 TEF TGTTTATGTAAMTK 4.2e0000 5.7e-003 -5.17 0.0 111 487 140 446 0.22793 2.3e-005 243 3 M6546_1.02 ZFHX3 RTTAWTAATTA 5.6e-003 7.6e-006 -11.79 0.0 156 490 150 323 0.31837 3.1e-008 244 3 M6555_1.02 ZNF333 SKATAATGA 8.6e0000 1.2e-002 -4.45 0.0 92 492 110 413 0.18699 4.8e-005 245 3 M6557_1.02 ZNF384 GSAAAAAVYMBS 4.0e-006 5.4e-009 -19.03 0.0 111 489 196 559 0.22699 2.2e-011 244 3 M6559_1.02 ZNF589 CCMASGGKWWYWRCCS 8.5e0000 1.2e-002 -4.46 0.0 119 485 179 561 0.24536 4.8e-005 242 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).