******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF324.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr8:37479265-37479765 1.0000 100 chr19:40090540-40091040 1.0000 100 chr5:158451535-158452035 1.0000 100 chr3:194134798-194135298 1.0000 100 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chr12:54359114-54359614 1.0000 100 chr19:39411965-39412465 1.0000 100 chr10:101830476-10183097 1.0000 100 chr19:36604761-36605261 1.0000 100 chr5:5340245-5340745 1.0000 100 chr13:110870206-11087070 1.0000 100 chr9:133030706-133031206 1.0000 100 chr1:37989827-37990327 1.0000 100 chr6:157323265-157323765 1.0000 100 chr17:59619503-59620003 1.0000 100 chr16:30698034-30698534 1.0000 100 chr19:1021377-1021877 1.0000 100 chr21:43728512-43729012 1.0000 100 chr19:40920978-40921478 1.0000 100 chrX:41333338-41333838 1.0000 100 chr17:59565174-59565674 1.0000 100 chr22:39529090-39529590 1.0000 100 chr10:93702443-93702943 1.0000 100 chr19:37655821-37656321 1.0000 100 chr1:16122847-16123347 1.0000 100 chr17:3890068-3890568 1.0000 100 chr1:26620515-26621015 1.0000 100 chr14:99821631-99822131 1.0000 100 chr1:1375033-1375533 1.0000 100 chr11:47578718-47579218 1.0000 100 chr17:7836707-7837207 1.0000 100 chr6:131628023-131628523 1.0000 100 chrX:53225106-53225606 1.0000 100 chr20:45972080-45972580 1.0000 100 chr15:64387518-64388018 1.0000 100 chr1:206612177-206612677 1.0000 100 chr15:72375777-72376277 1.0000 100 chr1:32817124-32817624 1.0000 100 chr1:27321870-27322370 1.0000 100 chr1:25998125-25998625 1.0000 100 chr17:57849937-57850437 1.0000 100 chr6:169396001-169396501 1.0000 100 chr17:42388535-42389035 1.0000 100 chr17:42998055-42998555 1.0000 100 chr8:16825889-16826389 1.0000 100 chr12:49060566-49061066 1.0000 100 chr19:36916421-36916921 1.0000 100 chr17:74514179-74514679 1.0000 100 chr15:74546104-74546604 1.0000 100 chr21:29217746-29218246 1.0000 100 chr17:63842557-63843057 1.0000 100 chr20:37095880-37096380 1.0000 100 chr1:46132563-46133063 1.0000 100 chr3:53347398-53347898 1.0000 100 chr5:176388752-176389252 1.0000 100 chr6:143450499-143450999 1.0000 100 chr1:229221379-229221879 1.0000 100 chr12:56041758-56042258 1.0000 100 chr17:51153324-51153824 1.0000 100 chr1:93078910-93079410 1.0000 100 chr12:57111961-57112461 1.0000 100 chr1:31387528-31388028 1.0000 100 chrUn_KI270467v1:2847-33 1.0000 100 chr5:57042473-57042973 1.0000 100 chr20:58650922-58651422 1.0000 100 chr19:35947307-35947807 1.0000 100 chr12:12266942-12267442 1.0000 100 chr12:124914567-12491506 1.0000 100 chr8:630768-631268 1.0000 100 chr1:183471813-183472313 1.0000 100 chrX:73943971-73944471 1.0000 100 chr19:37594301-37594801 1.0000 100 chr1:63523090-63523590 1.0000 100 chr1:3992024-3992524 1.0000 100 chr15:65610918-65611418 1.0000 100 chr21:32771793-32772293 1.0000 100 chr8:144456585-144457085 1.0000 100 chr16:1271739-1272239 1.0000 100 chr1:234723925-234724425 1.0000 100 chr5:1950694-1951194 1.0000 100 chr17:74513974-74514474 1.0000 100 chr21:39313523-39314023 1.0000 100 chr13:110965226-11096572 1.0000 100 chr17:77233788-77234288 1.0000 100 chr19:1383507-1384007 1.0000 100 chrUn_KI270467v1:2001-25 1.0000 100 chr1:236097024-236097524 1.0000 100 chr10:93209008-93209508 1.0000 100 chr1:155244581-155245081 1.0000 100 chr17:78558312-78558812 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF324.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF324.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF324.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.213 C 0.287 G 0.287 T 0.213 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF324.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.209 C 0.290 G 0.290 T 0.209 ******************************************************************************** ******************************************************************************** MOTIF ACACACACACACACACACACACACACACACACACACACACRCAYASAS MEME-1 width = 48 sites = 31 llr = 1127 E-value = 9.8e-266 ******************************************************************************** -------------------------------------------------------------------------------- Motif ACACACACACACACACACACACACACACACACACACACACRCAYASAS MEME-1 Description -------------------------------------------------------------------------------- Simplified A 71718:8:919:91917:a:8:a:8:816:816:716:6:6:516:5: pos.-specific C :819:9:a18:9:919:a:91a:8:91929:81817:61817152515 probability G 2:1:111::2::1:::1::11::111:111:12111331232222423 matrix T 111::::::::1::::2:::1::11:1:1:1:1121112:1123:121 bits 2.3 2.0 * * 1.8 * * ** ** 1.6 * ** * **** ** ** * Relative 1.4 ****** ****** *** ** *** * Entropy 1.1 * ****** ************* **** ** (52.5 bits) 0.9 ** ************************* *** ** * 0.7 **************************** ****** ****** 0.5 ******************************************* *** 0.2 ************************************************ 0.0 ------------------------------------------------ Multilevel ACACACACACACACACACACACACACACACACACACACACACACACAC consensus GG G TT G G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACACACACACACACACACACACACRCAYASAS MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------------ chr19:35819854-35820354 + 4 6.77e-30 tgt acacacacacacacacacacacacacacacacacacacacacacacac acacatgctc chr2:241881341-241881841 - 52 2.04e-28 C ACACACACACACACACACACACACACACACACACACACACACACACGC TGGGCCACGC chr1:161097518-161098018 - 12 1.98e-26 CTCTCAGGTG ACACACACACACACACACACACACACACACACACACACACAGAGAGAG AGAGAGAGAG chr6:32583779-32584279 + 38 1.32e-25 tgtctctctc tcacacacacacacacacacacacacacacacacacacacacTCAGAT TCCCAGCTCA chr6:36680084-36680584 - 12 1.75e-24 TGACACAGAC ACACACACACACACACACACACACACACACACACACGCCCGCGCAGAC ACGCACGCGC chr19:33273980-33274480 - 18 5.63e-22 CACACCCCAC ACCCACACAGACACACGCACGCACACACACACACACACACACACAGAC TCAGCCACTG chr1:201435645-201436145 - 50 9.60e-22 CAC ACACACACACACACACACACACACACAGGCACGCGCACACACATGCAC ACACATGCAC chr1:156661291-156661791 - 53 1.09e-21 . ACACACACACACACACACACACACACACACACACACGGACTGGGCCAG GGGTTGGACT chr22:35840384-35840884 - 24 1.09e-21 TCCCCCCTAC ACACACACACACACACACACACACGCACACACGCACACACGCGTGCGC ACAGCGTACA chr12:106075043-10607554 + 44 1.25e-21 GTATTAATCA acacacacacacacacacacacacacacacacaGAGAGAGAGAGAGAG CGTTCTCAG chr10:101442037-10144253 - 35 1.07e-20 TATCTCATTT ACACACACACACACACACACACATACACACAGAGACAGAGAGAGAGAG AGAGAGAGAT chr3:69250019-69250519 - 52 3.54e-20 G ACACACACACACACACACACACACACACGCACACACAGTGGTTTCGCC TTAACCCTCA chr7:25856812-25857312 + 3 7.97e-20 ac acacacacacacacacacacacacgcacgcacgcacgcgcgcgcgcac AAACACCTCT chr10:101830476-10183097 + 3 3.41e-19 AC GCCcacacacacacacacacacacacacacacGCACGCAGGCCTGGGG CACGCCCCTC chr12:57111961-57112461 + 50 8.06e-19 AGCCCATTGC AATcacaacaccacacacacacacacacacacacacacacacacacac aca chr3:136802547-136803047 - 31 3.44e-18 TTTCTGTCTC TCTCTCTCACACACACACAGACACACACACACACTCACTCACTTACAC AGGCTTGATT chr1:44404937-44405437 - 28 4.65e-18 ACACACGCGC GCACACACACACGCACGCACACATTCTCTCACACTCACACACATACAG GCACTCTGAG chr9:135967563-135968063 - 5 2.21e-17 AGGCGCGCGC GCGCGCGCACACACACACACACACACACACACGCCTGCACACTCACCC CCAC chr3:194134798-194135298 + 33 4.69e-17 tgcccccggG GCGCGCGcacacacactcactcacacacgcacgcacacacacaTCCTC CCGGCCCGGC chr19:37594959-37595459 - 29 7.43e-17 ACACGCGCGC GCACAGACCCACACACACACGCACACACACACACATGGCCGCAAAGAA TGCGTCACAC chr15:40092244-40092744 + 1 6.67e-16 . acacagactcacacacacacacacacacacacCCTTGTGCGCCCGCCC GCTCTCCCTC chr11:120346989-12034748 - 53 2.70e-15 . ACACACACACACACACACAGACAGAGAGAGAGAGAGAGAGAGAAACAG AGAGAGACAG chr17:50169215-50169715 + 2 1.02e-14 c acacacacacacacacacacacacacacacCCCTGAAGTTCTACCTTT CCCCCACAAG chr2:136248216-136248716 - 48 1.49e-14 TGTGA TGTAACACACATGCACACACACACACACACACTTGAGCACACACATGG AAACCTGATC chr1:31386608-31387108 + 41 7.94e-14 CCCTAGGCAC AACCACACAGACGACCTCACCCACACCCCCAGACACATCCACACAGAT GACCACACCA chr19:36916421-36916921 - 10 4.62e-13 CCATCAGATT ATTCGTGCCGTCACACTCACACACACAACCACACACCCACACTAACTC CCATCACAG chr1:226711159-226711659 - 52 1.97e-12 C ACACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC TCTCTTTCAA chr1:31387528-31388028 + 17 2.67e-12 CCCCAGACAC ATCCACACAGATGACCTCACCCACACCCCGAGACACATCCACACGGAC GACCTCACCC chr19:36604761-36605261 + 9 5.44e-12 acagaacg gcacacacaaacacaatcacacaGTCTCCCTCCCCAGCAGGTGACTTG CACACAGGCC chr22:38179960-38180460 + 1 1.99e-11 . acacacacacacacacacacacaGAGTATTTAAATTTCTCCTTTCTGT ATCTCTTAGT chr1:226308703-226309203 + 2 1.36e-10 C ACAACCCCAGAAACCAACACACAGACACCATAACAAAGGCGGCGACGC GGCGGCAACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACACACACACACACACACACACACRCAYASAS MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:35819854-35820354 6.8e-30 3_[+1]_49 chr2:241881341-241881841 2e-28 51_[-1]_1 chr1:161097518-161098018 2e-26 11_[-1]_41 chr6:32583779-32584279 1.3e-25 37_[+1]_15 chr6:36680084-36680584 1.8e-24 11_[-1]_41 chr19:33273980-33274480 5.6e-22 17_[-1]_35 chr1:201435645-201436145 9.6e-22 49_[-1]_3 chr1:156661291-156661791 1.1e-21 52_[-1] chr22:35840384-35840884 1.1e-21 23_[-1]_29 chr12:106075043-10607554 1.2e-21 43_[+1]_9 chr10:101442037-10144253 1.1e-20 34_[-1]_18 chr3:69250019-69250519 3.5e-20 51_[-1]_1 chr7:25856812-25857312 8e-20 2_[+1]_50 chr10:101830476-10183097 3.4e-19 2_[+1]_50 chr12:57111961-57112461 8.1e-19 49_[+1]_3 chr3:136802547-136803047 3.4e-18 30_[-1]_22 chr1:44404937-44405437 4.6e-18 27_[-1]_25 chr9:135967563-135968063 2.2e-17 4_[-1]_48 chr3:194134798-194135298 4.7e-17 32_[+1]_20 chr19:37594959-37595459 7.4e-17 28_[-1]_24 chr15:40092244-40092744 6.7e-16 [+1]_52 chr11:120346989-12034748 2.7e-15 52_[-1] chr17:50169215-50169715 1e-14 1_[+1]_51 chr2:136248216-136248716 1.5e-14 47_[-1]_5 chr1:31386608-31387108 7.9e-14 40_[+1]_12 chr19:36916421-36916921 4.6e-13 9_[-1]_43 chr1:226711159-226711659 2e-12 51_[-1]_1 chr1:31387528-31388028 2.7e-12 16_[+1]_36 chr19:36604761-36605261 5.4e-12 8_[+1]_44 chr22:38179960-38180460 2e-11 [+1]_52 chr1:226308703-226309203 1.4e-10 1_[+1]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACACACACACACACACACACACACRCAYASAS MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ACACACACACACACACACACACACACACACACACACACACRCAYASAS width=48 seqs=31 chr19:35819854-35820354 ( 4) ACACACACACACACACACACACACACACACACACACACACACACACAC 1 chr2:241881341-241881841 ( 52) ACACACACACACACACACACACACACACACACACACACACACACACGC 1 chr1:161097518-161098018 ( 12) ACACACACACACACACACACACACACACACACACACACACAGAGAGAG 1 chr6:32583779-32584279 ( 38) TCACACACACACACACACACACACACACACACACACACACACTCAGAT 1 chr6:36680084-36680584 ( 12) ACACACACACACACACACACACACACACACACACACGCCCGCGCAGAC 1 chr19:33273980-33274480 ( 18) ACCCACACAGACACACGCACGCACACACACACACACACACACACAGAC 1 chr1:201435645-201436145 ( 50) ACACACACACACACACACACACACACAGGCACGCGCACACACATGCAC 1 chr1:156661291-156661791 ( 53) ACACACACACACACACACACACACACACACACACACGGACTGGGCCAG 1 chr22:35840384-35840884 ( 24) ACACACACACACACACACACACACGCACACACGCACACACGCGTGCGC 1 chr12:106075043-10607554 ( 44) ACACACACACACACACACACACACACACACACAGAGAGAGAGAGAGAG 1 chr10:101442037-10144253 ( 35) ACACACACACACACACACACACATACACACAGAGACAGAGAGAGAGAG 1 chr3:69250019-69250519 ( 52) ACACACACACACACACACACACACACACGCACACACAGTGGTTTCGCC 1 chr7:25856812-25857312 ( 3) ACACACACACACACACACACACACGCACGCACGCACGCGCGCGCGCAC 1 chr10:101830476-10183097 ( 3) GCCCACACACACACACACACACACACACACACGCACGCAGGCCTGGGG 1 chr12:57111961-57112461 ( 50) AATCACAACACCACACACACACACACACACACACACACACACACACAC 1 chr3:136802547-136803047 ( 31) TCTCTCTCACACACACACAGACACACACACACACTCACTCACTTACAC 1 chr1:44404937-44405437 ( 28) GCACACACACACGCACGCACACATTCTCTCACACTCACACACATACAG 1 chr9:135967563-135968063 ( 5) GCGCGCGCACACACACACACACACACACACACGCCTGCACACTCACCC 1 chr3:194134798-194135298 ( 33) GCGCGCGCACACACACTCACTCACACACGCACGCACACACACATCCTC 1 chr19:37594959-37595459 ( 29) GCACAGACCCACACACACACGCACACACACACACATGGCCGCAAAGAA 1 chr15:40092244-40092744 ( 1) ACACAGACTCACACACACACACACACACACACCCTTGTGCGCCCGCCC 1 chr11:120346989-12034748 ( 53) ACACACACACACACACACAGACAGAGAGAGAGAGAGAGAGAGAAACAG 1 chr17:50169215-50169715 ( 2) ACACACACACACACACACACACACACACACCCCTGAAGTTCTACCTTT 1 chr2:136248216-136248716 ( 48) TGTAACACACATGCACACACACACACACACACTTGAGCACACACATGG 1 chr1:31386608-31387108 ( 41) AACCACACAGACGACCTCACCCACACCCCCAGACACATCCACACAGAT 1 chr19:36916421-36916921 ( 10) ATTCGTGCCGTCACACTCACACACACAACCACACACCCACACTAACTC 1 chr1:226711159-226711659 ( 52) ACACACACACACACACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC 1 chr1:31387528-31388028 ( 17) ATCCACACAGATGACCTCACCCACACCCCGAGACACATCCACACGGAC 1 chr19:36604761-36605261 ( 9) GCACACACAAACACAATCACACAGTCTCCCTCCCCAGCAGGTGACTTG 1 chr22:38179960-38180460 ( 1) ACACACACACACACACACACACAGAGTATTTAAATTTCTCCTTTCTGT 1 chr1:226308703-226309203 ( 2) ACAACCCCAGAAACCAACACACAGACACCATAACAAAGGCGGCGACGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACACACACACACACACACACACACRCAYASAS MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 48 n= 31800 bayes= 11.9929 E= 9.8e-266 176 -1160 -59 -111 -170 153 -317 -170 169 -117 -217 -70 -170 169 -1160 -1160 200 -317 -158 -270 -1160 164 -217 -270 200 -317 -158 -270 -270 174 -1160 -1160 206 -158 -1160 -270 -170 141 -85 -1160 216 -317 -1160 -270 -270 164 -1160 -170 206 -1160 -117 -1160 -170 169 -1160 -1160 211 -158 -1160 -1160 -170 169 -1160 -1160 182 -1160 -217 -11 -1160 178 -1160 -1160 221 -1160 -1160 -270 -1160 169 -217 -1160 194 -217 -217 -170 -1160 178 -1160 -1160 221 -1160 -1160 -270 -1160 147 -117 -170 200 -1160 -217 -111 -1160 169 -217 -1160 194 -217 -1160 -70 -170 158 -217 -1160 155 -85 -117 -111 -270 158 -217 -270 200 -317 -1160 -70 -170 147 -117 -1160 162 -158 -59 -170 -270 147 -158 -170 169 -217 -158 -38 -70 122 -217 -70 155 -317 0 -170 -1160 115 -17 -111 155 -117 -158 -38 -1160 141 -59 -270 147 -217 0 -170 -1160 122 -59 -70 130 -158 -85 11 -70 64 -85 30 147 -59 -59 -270 -1160 83 29 -70 139 -158 -59 -38 -270 92 0 -70 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACACACACACACACACACACACACRCAYASAS MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 48 nsites= 31 E= 9.8e-266 0.709677 0.000000 0.193548 0.096774 0.064516 0.838710 0.032258 0.064516 0.677419 0.129032 0.064516 0.129032 0.064516 0.935484 0.000000 0.000000 0.838710 0.032258 0.096774 0.032258 0.000000 0.903226 0.064516 0.032258 0.838710 0.032258 0.096774 0.032258 0.032258 0.967742 0.000000 0.000000 0.870968 0.096774 0.000000 0.032258 0.064516 0.774194 0.161290 0.000000 0.935484 0.032258 0.000000 0.032258 0.032258 0.903226 0.000000 0.064516 0.870968 0.000000 0.129032 0.000000 0.064516 0.935484 0.000000 0.000000 0.903226 0.096774 0.000000 0.000000 0.064516 0.935484 0.000000 0.000000 0.741935 0.000000 0.064516 0.193548 0.000000 1.000000 0.000000 0.000000 0.967742 0.000000 0.000000 0.032258 0.000000 0.935484 0.064516 0.000000 0.806452 0.064516 0.064516 0.064516 0.000000 1.000000 0.000000 0.000000 0.967742 0.000000 0.000000 0.032258 0.000000 0.806452 0.129032 0.064516 0.838710 0.000000 0.064516 0.096774 0.000000 0.935484 0.064516 0.000000 0.806452 0.064516 0.000000 0.129032 0.064516 0.870968 0.064516 0.000000 0.612903 0.161290 0.129032 0.096774 0.032258 0.870968 0.064516 0.032258 0.838710 0.032258 0.000000 0.129032 0.064516 0.806452 0.129032 0.000000 0.645161 0.096774 0.193548 0.064516 0.032258 0.806452 0.096774 0.064516 0.677419 0.064516 0.096774 0.161290 0.129032 0.677419 0.064516 0.129032 0.612903 0.032258 0.290323 0.064516 0.000000 0.645161 0.258065 0.096774 0.612903 0.129032 0.096774 0.161290 0.000000 0.774194 0.193548 0.032258 0.580645 0.064516 0.290323 0.064516 0.000000 0.677419 0.193548 0.129032 0.516129 0.096774 0.161290 0.225806 0.129032 0.451613 0.161290 0.258065 0.580645 0.193548 0.193548 0.032258 0.000000 0.516129 0.354839 0.129032 0.548387 0.096774 0.193548 0.161290 0.032258 0.548387 0.290323 0.129032 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ACACACACACACACACACACACACACACACACACACACACRCAYASAS MEME-1 regular expression -------------------------------------------------------------------------------- ACACACACACACACACACACACACACACACACACAC[AG][CG]AC[AG]C[AT][CT]A[CG]A[CG] -------------------------------------------------------------------------------- Time 357.64 secs. ******************************************************************************** ******************************************************************************** MOTIF TBTGTTTYTKTHTBTYTNTYTB MEME-2 width = 22 sites = 62 llr = 737 E-value = 2.1e-042 ******************************************************************************** -------------------------------------------------------------------------------- Motif TBTGTTTYTKTHTBTYTNTYTB MEME-2 Description -------------------------------------------------------------------------------- Simplified A ::221:1:1:131::2:31:3: pos.-specific C 14:2:225:214:22332:5:3 probability G 13:5:2:1:4:11311:23::3 matrix T 8372967495838474726573 bits 2.3 2.0 1.8 * 1.6 * * Relative 1.4 * * * * Entropy 1.1 * * * * * * * ** (17.2 bits) 0.9 * * * * * * * * * ** 0.7 * * *** * * * * * *** 0.5 *** ******* * * * *** 0.2 ***************** **** 0.0 ---------------------- Multilevel TCTGTTTCTTTCTTTTTATTTC consensus TA GCT G A G CCCGCAG sequence G T C T T G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TBTGTTTYTKTHTBTYTNTYTB MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr11:120346989-12034748 + 4 1.20e-10 ttc tttctttctttctctttctttt tctttctttc chr17:75368291-75368791 + 32 1.86e-10 gcgtcaggcG TTTGtttttttttttgttgttt ttttttttaa chrX:68462526-68463026 - 54 2.84e-10 GTGTTTTTGT TTTGTTTTTGTTTTGTTTTTTT GAGACATGAT chr1:28648532-28649032 + 77 7.65e-10 AAAGAGATTC TGTGTGTGTTTTTTTTTTTTTT TA chr6:44247008-44247508 + 44 1.91e-09 TCGTGTTGTT TTTGTTTTTTTCTGTCCTTTAG GGAGCCTTAG chr19:39073782-39074282 - 75 6.18e-09 TTCT TTTTTTCTTTCCTTTTTCTTTT CTATTTTTCC chr5:172958978-172959478 - 43 9.90e-09 GAGGCTTACT GGTGTTCTTTTTTTTTTTTTTG AGACGGAGTC chr17:48728679-48729179 + 25 1.56e-08 tctctctctc tctgtctctgtctctctctctc gctctctcgc chr16:12120436-12120936 + 26 3.20e-08 GTCATCTGGC TGTGTGTCTGTGTTTATGTTTG GGTCCCTGGG chr6:32583779-32584279 + 16 3.20e-08 tcttcctctc tctgtctctctctgtctctctc tcacacacac chr7:149718949-149719449 + 53 4.22e-08 gctttcttct tttgtgtctgtctctgtgtctc ttctgataag chr3:136802547-136803047 - 79 6.32e-08 . TCTCTCTCTCTCTTTCTGTCTC TCTCTCTCAC chr19:45092772-45093272 + 36 7.21e-08 CTTCCTGCCC TTTGTTTCTCTCTTCATGTCAC CCGCGGGACA chr19:44259431-44259931 + 31 9.34e-08 ccacgcccag ctaatttttgtatttttagtag agacggggtt chr22:37844463-37844963 + 70 9.34e-08 ccacgcccag ctaatttttgtatttttagtag agacggggt chr11:114160001-11416050 + 52 1.20e-07 TCATACACCA TTAATTTTTTTTTTCTAATCTG GTTGGGGTGG chr1:155244581-155245081 - 69 1.54e-07 CGCCGGCTCC TCTCTCTCTCTCTCTCTCTCTC GCTCGCTCTC chr22:40711461-40711961 - 1 1.54e-07 AAATACTTGG TTTTTTTGTTCTGTTTTGTTTG chr9:18976709-18977209 + 74 1.74e-07 ATCATCATCA TCTTATCCTTTTTCTTCATTAT TGCTA chrX:120309457-120309957 + 16 1.74e-07 TTCCCACctc tctgtctctctctctctcgctc tcgctgtcgc chr7:133492150-133492650 + 72 3.95e-07 CATTTCATTA TGTATGCTTTTATGGTTCTCTT TTGGTTG chr1:161764993-161765493 + 6 4.42e-07 TTATG TCAATTTTTGAATTTGTAATTG GGTGAGAATT chr20:35616591-35617091 + 2 4.42e-07 g ccaatttttgtgtttttagtag agacggggtt chr7:139339827-139340327 + 19 4.94e-07 accacgcccg gctaattctgtatttttagtag agacagggtt chr10:42782481-42782981 + 48 4.94e-07 ATGCCGGTCT CTTTTTTCTGCCTTCTTGTTTC CCTCCGGCGA chr8:16825889-16826389 - 1 6.16e-07 GGGTTTTTAA TGTGTGTGTGTGTGTATGTCTG chr12:54359114-54359614 - 43 6.16e-07 GTTCGCACGC TCTCTCTCTTTCGCTGTCTCTT ACAGGCAGAT chr1:234723925-234724425 - 43 8.49e-07 TGCCAGCAGG GTGGTTTTTTTCTCTCTCTCTC CACCTCCCTC chr1:28884745-28885245 - 5 9.42e-07 GGAATATGCT TGTGATCCTGTATCTCCTGTTT CTGT chr22:41468711-41469211 + 16 1.05e-06 GTGCTTGGTA TCTATTTCTGCAAGTGTCTTTG GGCAGTCCGA chr1:151494696-151495196 + 77 1.16e-06 GTGGGAAGTT TTTTTTTTTTTCTGCCCACTTC TG chr12:27710685-27711185 + 72 1.28e-06 CTAGCCTGCG TGAGTGTCTGTCTCGTCTTCTC TGGGCTT chrUn_KI270467v1:3049-35 + 57 1.28e-06 atttggggta ttttatattttatgtacagtat acaatatata chr5:17305906-17306406 - 70 1.28e-06 ACAGATTGT TGTCTTTCTGATTGTGTAACTT GGCATTAAAG chr16:29863153-29863653 - 14 1.42e-06 TATTCGGTCT TCTCTTTTACCCTTTCCTTTTC CGTTTCTAAC chr19:37467315-37467815 + 53 1.57e-06 GAAGCCCGGC TCAGTGTGTTTAGTTCCGTCTT TTTGGGTCTC chrUn_KI270467v1:2847-33 + 8 1.91e-06 ttgttaa tttcatattttatgtacagtat ataatgcata chr1:86774471-86774971 - 77 2.80e-06 CA TCTGTTCTATTGACTCTCTTTG ATGGAATATA chr9:109816402-109816902 - 31 3.37e-06 CGGGGTGACT TCAGTGTTTGTGTTCATGACTC ATTCAACCCT chr7:139340516-139341016 + 58 3.70e-06 tctggggtGG CCTGTGACTTTTGTCCTTTTTT CCCCTTTCTA chr12:48021661-48022161 - 24 4.43e-06 TGGTTGTTAA TGTGTTTGTTTAGGGTCCATTG TGATGTCTTT chr13:113493244-11349374 + 73 4.84e-06 CATGACTAAG TGATTGCCTCATTGTTTGTTTT TAAGGT chr5:134370969-134371469 + 69 5.29e-06 GACGGGATAG TGTTTCTGTTTCGTGGTCTTTG AATCCACAAC chr10:12720339-12720839 - 46 5.77e-06 CTTGGGACAA TGAGTCTCTGTTTGCTTAGCTA AGATTAGAGA chr1:224623821-224624321 + 66 5.77e-06 cattttgcta tttgtgtatcttatctcttttc caaagaCACT chr14:76486242-76486742 - 64 6.29e-06 GAGTTCATAA TCTGTTAATTTATGATCGTTTC TGTCGACCTG chr19:38336560-38337060 - 52 6.29e-06 CGCCTCCACG TCTCTTCCTTTAACTTTATCCT CACCTTGCTC chr10:665534-666034 - 65 7.47e-06 GCCTGGCTCT TGTTTTCCTTTCGATCTCGTAT ATTTCATCGG chr17:45148373-45148873 + 57 8.83e-06 AAAGGGGAGA TGAGTTTGTCTGTCCTCTGCTG AGGCTACGGC chr22:20496077-20496577 + 23 8.83e-06 cttcactctc tcattccttcccttcctatctt acccaccatt chr15:72230393-72230893 - 44 8.83e-06 GTCCCCTGAT TCTAATGCTTTCTGTGTAACTC ATTGAAACTG chr12:4538379-4538879 + 64 8.83e-06 AGGTGTATTT CTATTGTTATTCTGTATTTCAG AGACAGGGCA chr14:99821631-99822131 + 10 1.13e-05 GCTAATATG TCGGTTTTATAATGTACTTCTG TGGCTAACCA chrUn_KI270467v1:2001-25 + 63 1.22e-05 tttcatgtac cttcatattttatgtacagtat acaatatata chr17:59209710-59210210 - 34 1.22e-05 CTCCGCTTCT TCAGTTCCTGCTTTCCCGTCAC TTGAGTTCCG chr6:169396001-169396501 - 41 1.55e-05 GAGGTCATTT TTGGTCCCTGTCGCTTTGGTTG TCTGCAGAGT chr12:56079815-56080315 + 75 1.55e-05 ttcctccctc cctctctctctctctctcacac acac chr9:137328155-137328655 - 23 1.67e-05 ATCATATGAG TGTATATTAGTTGTTTTTACTC ATCATATGGG chr16:15590883-15591383 + 38 1.95e-05 aaacagtgag tcagatcctgttatcacttctc actttacaga chr17:71438667-71439167 + 7 2.62e-05 TGTGCT GTTGTTTGTGATTGTTAAGCTG CGTGTCTCGC chr17:4143092-4143592 - 68 3.26e-05 CCCACGTCCG GCTAATATTTTGTATTTAGTAG AGACAGGGTT chr17:78558312-78558812 + 42 5.99e-05 TCATTGCATG TGTATGACATCATTGTCATCAC CACGGGTGGG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TBTGTTTYTKTHTBTYTNTYTB MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr11:120346989-12034748 1.2e-10 3_[+2]_75 chr17:75368291-75368791 1.9e-10 31_[+2]_47 chrX:68462526-68463026 2.8e-10 53_[-2]_25 chr1:28648532-28649032 7.7e-10 76_[+2]_2 chr6:44247008-44247508 1.9e-09 43_[+2]_35 chr19:39073782-39074282 6.2e-09 74_[-2]_4 chr5:172958978-172959478 9.9e-09 42_[-2]_36 chr17:48728679-48729179 1.6e-08 24_[+2]_54 chr16:12120436-12120936 3.2e-08 25_[+2]_53 chr6:32583779-32584279 3.2e-08 15_[+2]_63 chr7:149718949-149719449 4.2e-08 52_[+2]_26 chr3:136802547-136803047 6.3e-08 78_[-2] chr19:45092772-45093272 7.2e-08 35_[+2]_43 chr19:44259431-44259931 9.3e-08 30_[+2]_48 chr22:37844463-37844963 9.3e-08 69_[+2]_9 chr11:114160001-11416050 1.2e-07 51_[+2]_27 chr1:155244581-155245081 1.5e-07 68_[-2]_10 chr22:40711461-40711961 1.5e-07 [-2]_78 chr9:18976709-18977209 1.7e-07 73_[+2]_5 chrX:120309457-120309957 1.7e-07 15_[+2]_63 chr7:133492150-133492650 4e-07 71_[+2]_7 chr1:161764993-161765493 4.4e-07 5_[+2]_73 chr20:35616591-35617091 4.4e-07 1_[+2]_77 chr7:139339827-139340327 4.9e-07 18_[+2]_60 chr10:42782481-42782981 4.9e-07 47_[+2]_31 chr8:16825889-16826389 6.2e-07 [-2]_78 chr12:54359114-54359614 6.2e-07 42_[-2]_36 chr1:234723925-234724425 8.5e-07 42_[-2]_36 chr1:28884745-28885245 9.4e-07 4_[-2]_74 chr22:41468711-41469211 1e-06 15_[+2]_63 chr1:151494696-151495196 1.2e-06 76_[+2]_2 chr12:27710685-27711185 1.3e-06 71_[+2]_7 chrUn_KI270467v1:3049-35 1.3e-06 56_[+2]_22 chr5:17305906-17306406 1.3e-06 69_[-2]_9 chr16:29863153-29863653 1.4e-06 13_[-2]_65 chr19:37467315-37467815 1.6e-06 52_[+2]_26 chrUn_KI270467v1:2847-33 1.9e-06 7_[+2]_71 chr1:86774471-86774971 2.8e-06 76_[-2]_2 chr9:109816402-109816902 3.4e-06 30_[-2]_48 chr7:139340516-139341016 3.7e-06 57_[+2]_21 chr12:48021661-48022161 4.4e-06 23_[-2]_55 chr13:113493244-11349374 4.8e-06 72_[+2]_6 chr5:134370969-134371469 5.3e-06 68_[+2]_10 chr10:12720339-12720839 5.8e-06 45_[-2]_33 chr1:224623821-224624321 5.8e-06 65_[+2]_13 chr14:76486242-76486742 6.3e-06 63_[-2]_15 chr19:38336560-38337060 6.3e-06 51_[-2]_27 chr10:665534-666034 7.5e-06 64_[-2]_14 chr17:45148373-45148873 8.8e-06 56_[+2]_22 chr22:20496077-20496577 8.8e-06 22_[+2]_56 chr15:72230393-72230893 8.8e-06 43_[-2]_35 chr12:4538379-4538879 8.8e-06 63_[+2]_15 chr14:99821631-99822131 1.1e-05 9_[+2]_69 chrUn_KI270467v1:2001-25 1.2e-05 62_[+2]_16 chr17:59209710-59210210 1.2e-05 33_[-2]_45 chr6:169396001-169396501 1.5e-05 40_[-2]_38 chr12:56079815-56080315 1.5e-05 74_[+2]_4 chr9:137328155-137328655 1.7e-05 22_[-2]_56 chr16:15590883-15591383 2e-05 37_[+2]_41 chr17:71438667-71439167 2.6e-05 6_[+2]_72 chr17:4143092-4143592 3.3e-05 67_[-2]_11 chr17:78558312-78558812 6e-05 41_[+2]_37 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TBTGTTTYTKTHTBTYTNTYTB MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TBTGTTTYTKTHTBTYTNTYTB width=22 seqs=62 chr11:120346989-12034748 ( 4) TTTCTTTCTTTCTCTTTCTTTT 1 chr17:75368291-75368791 ( 32) TTTGTTTTTTTTTTTGTTGTTT 1 chrX:68462526-68463026 ( 54) TTTGTTTTTGTTTTGTTTTTTT 1 chr1:28648532-28649032 ( 77) TGTGTGTGTTTTTTTTTTTTTT 1 chr6:44247008-44247508 ( 44) TTTGTTTTTTTCTGTCCTTTAG 1 chr19:39073782-39074282 ( 75) TTTTTTCTTTCCTTTTTCTTTT 1 chr5:172958978-172959478 ( 43) GGTGTTCTTTTTTTTTTTTTTG 1 chr17:48728679-48729179 ( 25) TCTGTCTCTGTCTCTCTCTCTC 1 chr16:12120436-12120936 ( 26) TGTGTGTCTGTGTTTATGTTTG 1 chr6:32583779-32584279 ( 16) TCTGTCTCTCTCTGTCTCTCTC 1 chr7:149718949-149719449 ( 53) TTTGTGTCTGTCTCTGTGTCTC 1 chr3:136802547-136803047 ( 79) TCTCTCTCTCTCTTTCTGTCTC 1 chr19:45092772-45093272 ( 36) TTTGTTTCTCTCTTCATGTCAC 1 chr19:44259431-44259931 ( 31) CTAATTTTTGTATTTTTAGTAG 1 chr22:37844463-37844963 ( 70) CTAATTTTTGTATTTTTAGTAG 1 chr11:114160001-11416050 ( 52) TTAATTTTTTTTTTCTAATCTG 1 chr1:155244581-155245081 ( 69) TCTCTCTCTCTCTCTCTCTCTC 1 chr22:40711461-40711961 ( 1) TTTTTTTGTTCTGTTTTGTTTG 1 chr9:18976709-18977209 ( 74) TCTTATCCTTTTTCTTCATTAT 1 chrX:120309457-120309957 ( 16) TCTGTCTCTCTCTCTCTCGCTC 1 chr7:133492150-133492650 ( 72) TGTATGCTTTTATGGTTCTCTT 1 chr1:161764993-161765493 ( 6) TCAATTTTTGAATTTGTAATTG 1 chr20:35616591-35617091 ( 2) CCAATTTTTGTGTTTTTAGTAG 1 chr7:139339827-139340327 ( 19) GCTAATTCTGTATTTTTAGTAG 1 chr10:42782481-42782981 ( 48) CTTTTTTCTGCCTTCTTGTTTC 1 chr8:16825889-16826389 ( 1) TGTGTGTGTGTGTGTATGTCTG 1 chr12:54359114-54359614 ( 43) TCTCTCTCTTTCGCTGTCTCTT 1 chr1:234723925-234724425 ( 43) GTGGTTTTTTTCTCTCTCTCTC 1 chr1:28884745-28885245 ( 5) TGTGATCCTGTATCTCCTGTTT 1 chr22:41468711-41469211 ( 16) TCTATTTCTGCAAGTGTCTTTG 1 chr1:151494696-151495196 ( 77) TTTTTTTTTTTCTGCCCACTTC 1 chr12:27710685-27711185 ( 72) TGAGTGTCTGTCTCGTCTTCTC 1 chrUn_KI270467v1:3049-35 ( 57) TTTTATATTTTATGTACAGTAT 1 chr5:17305906-17306406 ( 70) TGTCTTTCTGATTGTGTAACTT 1 chr16:29863153-29863653 ( 14) TCTCTTTTACCCTTTCCTTTTC 1 chr19:37467315-37467815 ( 53) TCAGTGTGTTTAGTTCCGTCTT 1 chrUn_KI270467v1:2847-33 ( 8) TTTCATATTTTATGTACAGTAT 1 chr1:86774471-86774971 ( 77) TCTGTTCTATTGACTCTCTTTG 1 chr9:109816402-109816902 ( 31) TCAGTGTTTGTGTTCATGACTC 1 chr7:139340516-139341016 ( 58) CCTGTGACTTTTGTCCTTTTTT 1 chr12:48021661-48022161 ( 24) TGTGTTTGTTTAGGGTCCATTG 1 chr13:113493244-11349374 ( 73) TGATTGCCTCATTGTTTGTTTT 1 chr5:134370969-134371469 ( 69) TGTTTCTGTTTCGTGGTCTTTG 1 chr10:12720339-12720839 ( 46) TGAGTCTCTGTTTGCTTAGCTA 1 chr1:224623821-224624321 ( 66) TTTGTGTATCTTATCTCTTTTC 1 chr14:76486242-76486742 ( 64) TCTGTTAATTTATGATCGTTTC 1 chr19:38336560-38337060 ( 52) TCTCTTCCTTTAACTTTATCCT 1 chr10:665534-666034 ( 65) TGTTTTCCTTTCGATCTCGTAT 1 chr17:45148373-45148873 ( 57) TGAGTTTGTCTGTCCTCTGCTG 1 chr22:20496077-20496577 ( 23) TCATTCCTTCCCTTCCTATCTT 1 chr15:72230393-72230893 ( 44) TCTAATGCTTTCTGTGTAACTC 1 chr12:4538379-4538879 ( 64) CTATTGTTATTCTGTATTTCAG 1 chr14:99821631-99822131 ( 10) TCGGTTTTATAATGTACTTCTG 1 chrUn_KI270467v1:2001-25 ( 63) CTTCATATTTTATGTACAGTAT 1 chr17:59209710-59210210 ( 34) TCAGTTCCTGCTTTCCCGTCAC 1 chr6:169396001-169396501 ( 41) TTGGTCCCTGTCGCTTTGGTTG 1 chr12:56079815-56080315 ( 75) CCTCTCTCTCTCTCTCTCACAC 1 chr9:137328155-137328655 ( 23) TGTATATTAGTTGTTTTTACTC 1 chr16:15590883-15591383 ( 38) TCAGATCCTGTTATCACTTCTC 1 chr17:71438667-71439167 ( 7) GTTGTTTGTGATTGTTAAGCTG 1 chr17:4143092-4143592 ( 68) GCTAATATTTTGTATTTAGTAG 1 chr17:78558312-78558812 ( 42) TGTATGACATCATTGTCATCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TBTGTTTYTKTHTBTYTNTYTB MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 10.8765 E= 2.1e-042 -1260 -117 -185 192 -1260 47 -17 69 21 -1260 -258 176 -11 -85 69 -24 -53 -1260 -1260 203 -370 -71 -47 151 -89 -47 -417 166 -270 64 -117 89 -111 -1260 -1260 211 -1260 -71 29 116 -138 -117 -1260 192 30 35 -136 30 -138 -1260 -100 189 -270 -26 0 106 -370 -59 -159 173 -38 -8 -117 106 -270 0 -1260 169 55 -26 -47 21 -89 -417 -17 155 -1260 69 -1260 135 30 -417 -1260 179 -370 22 22 55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TBTGTTTYTKTHTBTYTNTYTB MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 62 E= 2.1e-042 0.000000 0.129032 0.080645 0.790323 0.000000 0.403226 0.258065 0.338710 0.241935 0.000000 0.048387 0.709677 0.193548 0.161290 0.467742 0.177419 0.145161 0.000000 0.000000 0.854839 0.016129 0.177419 0.209677 0.596774 0.112903 0.209677 0.016129 0.661290 0.032258 0.451613 0.129032 0.387097 0.096774 0.000000 0.000000 0.903226 0.000000 0.177419 0.354839 0.467742 0.080645 0.129032 0.000000 0.790323 0.258065 0.370968 0.112903 0.258065 0.080645 0.000000 0.145161 0.774194 0.032258 0.241935 0.290323 0.435484 0.016129 0.193548 0.096774 0.693548 0.161290 0.274194 0.129032 0.435484 0.032258 0.290323 0.000000 0.677419 0.306452 0.241935 0.209677 0.241935 0.112903 0.016129 0.258065 0.612903 0.000000 0.467742 0.000000 0.532258 0.258065 0.016129 0.000000 0.725806 0.016129 0.338710 0.338710 0.306452 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TBTGTTTYTKTHTBTYTNTYTB MEME-2 regular expression -------------------------------------------------------------------------------- T[CTG][TA]GT[TG][TC][CT]T[TG]T[CAT]T[TGC]T[TC][TC][ACTG][TG][TC][TA][CGT] -------------------------------------------------------------------------------- Time 675.11 secs. ******************************************************************************** ******************************************************************************** MOTIF GRTGATGTCAY MEME-3 width = 11 sites = 56 llr = 620 E-value = 4.0e-036 ******************************************************************************** -------------------------------------------------------------------------------- Motif GRTGATGTCAY MEME-3 Description -------------------------------------------------------------------------------- Simplified A 36::a:::2a: pos.-specific C 11:::2::8:4 probability G 63:9:2a:::1 matrix T 1:a1:6:a::6 bits 2.3 * * * * 2.0 * * * * 1.8 * * ** * 1.6 * * ** * Relative 1.4 *** ** * Entropy 1.1 *** **** (16.0 bits) 0.9 *** ***** 0.7 ********** 0.5 *********** 0.2 *********** 0.0 ----------- Multilevel GATGATGTCAT consensus AG G C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGATGTCAY MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------- chr17:78558312-78558812 - 23 1.27e-07 CACATGCAAT GATGATGTCAT CCACCCATGA chr1:234723925-234724425 + 90 1.27e-07 ATGCAGCAGG GATGATGTCAT chr1:3992024-3992524 + 20 1.27e-07 TCAAAGGGGA GATGATGTCAT GGGAGAGGTG chr17:1293394-1293894 + 49 1.27e-07 GGTTGGGTTT GATGATGTCAT GGGCTGGGTT chr12:130764530-13076503 + 77 1.27e-07 ATGCAGTGTG GATGATGTCAT GGGGTTGATG chr18:79719597-79720097 + 22 1.27e-07 GTGTCCTGGT GATGATGTCAT CTCCTGCTGT chr5:158451535-158452035 + 64 1.27e-07 TGCCAAAGCC GATGATGTCAT CATCACTAGC chr12:130765131-13076563 + 81 2.20e-07 ATGTGGTGTT AATGATGTCAT GGTGTTGAT chr7:158097570-158098070 + 6 2.20e-07 TCTCT AATGATGTCAT AAGAAATAAT chr17:74513974-74514474 + 27 5.71e-07 tcatgtgatg ggtgatgtcat gtgatgggtg chr8:144456585-144457085 - 27 5.71e-07 GTCATCCCCC GGTGATGTCAT CCCCCCATGT chr17:74514179-74514679 + 9 5.71e-07 atgtgatg ggtgatgtcat gtgatgggtg chr10:94673530-94674030 - 6 5.71e-07 CCTGGGCCAA GGTGATGTCAT CTGGG chr17:74514457-74514957 + 52 5.71e-07 tcatgtgatg ggtgatgtcat gtgatgggtg chr12:130584380-13058488 - 34 6.64e-07 TGGCAGTGAT GATGATGTAAT GGTCATGATA chr13:110870206-11087070 - 81 8.40e-07 CAGCCTGGG GATGAGGTCAT TTTCCAAAAC chr22:38179960-38180460 + 56 1.27e-06 TGTATCTCTT AGTGATGTCAT TCTGCTGAGT chr17:51046595-51047095 + 22 1.27e-06 GCTCCCAAGC GATGACGTCAT TCCGTTCTCC chr22:37905016-37905516 - 51 1.51e-06 CTGCAGAGGT GGTGATGTCAC CCTGACCCAT chr17:46101138-46101638 + 71 1.67e-06 ATAGCCATAC AATGATGTAAT CCTAACTGCA chr7:157880938-157881438 + 43 1.93e-06 ATTACGGTAA AATGAGGTCAT GAGGGTATGT chr10:75358886-75359386 - 47 2.05e-06 GAGGTTTGGG GATGATGTAAC CACTCTGCAG chr1:156660081-156660581 + 59 2.55e-06 AGGTTGAGAG GATGAGGTCAC TCAGAGAACT chr1:31386608-31387108 - 15 2.97e-06 TAGGGGTGTG GGTGAGGTCAT CTGTGTGGAT chr9:85743258-85743758 - 42 3.39e-06 TCTGATGAAG AGTGATGTCAC ATTCCCAGGG chr19:14006677-14007177 + 28 3.39e-06 CTCGGGATTC GATGACGTCAC TGGGCGCGCG chr19:35612441-35612941 + 62 3.39e-06 CCCGGCAACC GATGACGTCAC TGTTGGCGCG chr15:67792450-67792950 + 12 3.85e-06 GTCATTCCAA GATTATGTCAT TGGATGTCAT chr20:62088359-62088859 - 66 4.07e-06 CTAGGACGGC TATGATGTCAC TTGGAGAAAG chr1:151281437-151281937 + 79 4.95e-06 ATGGTCAGCG GATGACGTAAT GTTTGGGGTG chr22:31055476-31055976 + 21 4.95e-06 CCTCGCTGGG CATGATGTCAC CACAATTGTG chr2:46540596-46541096 + 51 4.95e-06 GGGCCAAAAG AATGAGGTCAC TGTCACCAAT chr10:63707268-63707768 + 86 4.95e-06 CATTTCCCTA TGTGATGTCAT GTTT chr10:93209008-93209508 - 1 5.43e-06 GATCATAAGC AGTGAGGTCAT chr6:169396001-169396501 - 23 5.43e-06 TTGTCTGCAG AGTGAGGTCAT TTTCGGTCCC chr20:63339942-63340442 - 7 6.60e-06 TCTGTGTGGA TATGATGTAAT TCACTC chr1:233112861-233113361 - 59 6.60e-06 GTGATGACAA GCTGATGTCAC CCAACTGGCC chr20:63339296-63339796 - 43 6.60e-06 TCTTTGTGAA TATGATGTAAT TCATTCATCT chr13:50357546-50358046 - 16 6.60e-06 GAGATTAGAG GCTGATGTCAC CAGGAGAGTG chr10:5548776-5549276 + 70 7.49e-06 TCTATCTCAG GGTGACGTCAC CTCATACACA chr12:132144144-13214464 + 86 7.49e-06 TACGCGCAGT GGTGACGTCAC GGGA chr1:109984431-109984931 + 42 7.49e-06 AGCCCAGCGT GGTGACGTCAC GACAGAGTGC chr5:17305906-17306406 + 16 8.14e-06 TGCTTCAGGC AATGATGTCAG CAGTTGCGTG chr17:77233788-77234288 + 12 1.37e-05 caaatacaGG GATGAGGTCAG CAAAATGAGT chr1:61141576-61142076 + 11 1.37e-05 ATAGTGGCTA ACTGATGTAAT TAACTGACAT chr17:79993442-79993942 - 89 1.37e-05 G CATGAGGTCAC GGGCTCCCAG chr10:75379153-75379653 + 35 1.47e-05 TCGGATGGAT AATAATGTCAT TTGCTTGATG chr5:139517800-139518300 - 64 1.64e-05 CCCCGGGCCG GATGAAGTCAC CGGCCGGAGG chr16:4538620-4539120 + 45 1.64e-05 GATGCGCCGT GATGACGTCAG TGGGAGCGGA chr10:22552772-22553272 - 56 1.84e-05 TTCCCTGTCA CATGAGGTAAT TCTGCTGGGG chr6:41767106-41767606 - 36 1.84e-05 CAGGCCAAGA GGTGACGTAAC TTGCCTCAGG chr19:10416489-10416989 + 79 1.91e-05 GCGTCAGTCC GCTGACGTCAC GCCCCAGGAG chr12:109573054-10957355 - 5 2.45e-05 GTCACACCGC CGTGAGGTCAC CGCG chr10:50067632-50068132 - 51 2.45e-05 CCTCACGTGA CCTGATGTCAC GTGACAGAAC chrX:2417966-2418466 - 47 2.95e-05 TGACTGGTTG AGTTAGGTCAT TATGAGGTAT chr12:31749237-31749737 - 58 3.92e-05 ATTGCTCAGG AGTTATGTAAC AGGCAGTCAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGATGTCAY MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:78558312-78558812 1.3e-07 22_[-3]_67 chr1:234723925-234724425 1.3e-07 89_[+3] chr1:3992024-3992524 1.3e-07 19_[+3]_70 chr17:1293394-1293894 1.3e-07 48_[+3]_41 chr12:130764530-13076503 1.3e-07 76_[+3]_13 chr18:79719597-79720097 1.3e-07 21_[+3]_68 chr5:158451535-158452035 1.3e-07 63_[+3]_26 chr12:130765131-13076563 2.2e-07 80_[+3]_9 chr7:158097570-158098070 2.2e-07 5_[+3]_84 chr17:74513974-74514474 5.7e-07 26_[+3]_63 chr8:144456585-144457085 5.7e-07 26_[-3]_63 chr17:74514179-74514679 5.7e-07 8_[+3]_81 chr10:94673530-94674030 5.7e-07 5_[-3]_84 chr17:74514457-74514957 5.7e-07 51_[+3]_38 chr12:130584380-13058488 6.6e-07 33_[-3]_56 chr13:110870206-11087070 8.4e-07 80_[-3]_9 chr22:38179960-38180460 1.3e-06 55_[+3]_34 chr17:51046595-51047095 1.3e-06 21_[+3]_68 chr22:37905016-37905516 1.5e-06 50_[-3]_39 chr17:46101138-46101638 1.7e-06 70_[+3]_19 chr7:157880938-157881438 1.9e-06 42_[+3]_47 chr10:75358886-75359386 2.1e-06 46_[-3]_43 chr1:156660081-156660581 2.6e-06 58_[+3]_31 chr1:31386608-31387108 3e-06 14_[-3]_75 chr9:85743258-85743758 3.4e-06 41_[-3]_48 chr19:14006677-14007177 3.4e-06 27_[+3]_62 chr19:35612441-35612941 3.4e-06 61_[+3]_28 chr15:67792450-67792950 3.9e-06 11_[+3]_78 chr20:62088359-62088859 4.1e-06 65_[-3]_24 chr1:151281437-151281937 4.9e-06 78_[+3]_11 chr22:31055476-31055976 4.9e-06 20_[+3]_69 chr2:46540596-46541096 4.9e-06 50_[+3]_39 chr10:63707268-63707768 4.9e-06 85_[+3]_4 chr10:93209008-93209508 5.4e-06 [-3]_89 chr6:169396001-169396501 5.4e-06 22_[-3]_67 chr20:63339942-63340442 6.6e-06 6_[-3]_83 chr1:233112861-233113361 6.6e-06 58_[-3]_31 chr20:63339296-63339796 6.6e-06 42_[-3]_47 chr13:50357546-50358046 6.6e-06 15_[-3]_74 chr10:5548776-5549276 7.5e-06 69_[+3]_20 chr12:132144144-13214464 7.5e-06 85_[+3]_4 chr1:109984431-109984931 7.5e-06 41_[+3]_48 chr5:17305906-17306406 8.1e-06 15_[+3]_74 chr17:77233788-77234288 1.4e-05 11_[+3]_78 chr1:61141576-61142076 1.4e-05 10_[+3]_79 chr17:79993442-79993942 1.4e-05 88_[-3]_1 chr10:75379153-75379653 1.5e-05 34_[+3]_55 chr5:139517800-139518300 1.6e-05 63_[-3]_26 chr16:4538620-4539120 1.6e-05 44_[+3]_45 chr10:22552772-22553272 1.8e-05 55_[-3]_34 chr6:41767106-41767606 1.8e-05 35_[-3]_54 chr19:10416489-10416989 1.9e-05 78_[+3]_11 chr12:109573054-10957355 2.5e-05 4_[-3]_85 chr10:50067632-50068132 2.5e-05 50_[-3]_39 chrX:2417966-2418466 3e-05 46_[-3]_43 chr12:31749237-31749737 3.9e-05 57_[-3]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGATGTCAY MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GRTGATGTCAY width=11 seqs=56 chr17:78558312-78558812 ( 23) GATGATGTCAT 1 chr1:234723925-234724425 ( 90) GATGATGTCAT 1 chr1:3992024-3992524 ( 20) GATGATGTCAT 1 chr17:1293394-1293894 ( 49) GATGATGTCAT 1 chr12:130764530-13076503 ( 77) GATGATGTCAT 1 chr18:79719597-79720097 ( 22) GATGATGTCAT 1 chr5:158451535-158452035 ( 64) GATGATGTCAT 1 chr12:130765131-13076563 ( 81) AATGATGTCAT 1 chr7:158097570-158098070 ( 6) AATGATGTCAT 1 chr17:74513974-74514474 ( 27) GGTGATGTCAT 1 chr8:144456585-144457085 ( 27) GGTGATGTCAT 1 chr17:74514179-74514679 ( 9) GGTGATGTCAT 1 chr10:94673530-94674030 ( 6) GGTGATGTCAT 1 chr17:74514457-74514957 ( 52) GGTGATGTCAT 1 chr12:130584380-13058488 ( 34) GATGATGTAAT 1 chr13:110870206-11087070 ( 81) GATGAGGTCAT 1 chr22:38179960-38180460 ( 56) AGTGATGTCAT 1 chr17:51046595-51047095 ( 22) GATGACGTCAT 1 chr22:37905016-37905516 ( 51) GGTGATGTCAC 1 chr17:46101138-46101638 ( 71) AATGATGTAAT 1 chr7:157880938-157881438 ( 43) AATGAGGTCAT 1 chr10:75358886-75359386 ( 47) GATGATGTAAC 1 chr1:156660081-156660581 ( 59) GATGAGGTCAC 1 chr1:31386608-31387108 ( 15) GGTGAGGTCAT 1 chr9:85743258-85743758 ( 42) AGTGATGTCAC 1 chr19:14006677-14007177 ( 28) GATGACGTCAC 1 chr19:35612441-35612941 ( 62) GATGACGTCAC 1 chr15:67792450-67792950 ( 12) GATTATGTCAT 1 chr20:62088359-62088859 ( 66) TATGATGTCAC 1 chr1:151281437-151281937 ( 79) GATGACGTAAT 1 chr22:31055476-31055976 ( 21) CATGATGTCAC 1 chr2:46540596-46541096 ( 51) AATGAGGTCAC 1 chr10:63707268-63707768 ( 86) TGTGATGTCAT 1 chr10:93209008-93209508 ( 1) AGTGAGGTCAT 1 chr6:169396001-169396501 ( 23) AGTGAGGTCAT 1 chr20:63339942-63340442 ( 7) TATGATGTAAT 1 chr1:233112861-233113361 ( 59) GCTGATGTCAC 1 chr20:63339296-63339796 ( 43) TATGATGTAAT 1 chr13:50357546-50358046 ( 16) GCTGATGTCAC 1 chr10:5548776-5549276 ( 70) GGTGACGTCAC 1 chr12:132144144-13214464 ( 86) GGTGACGTCAC 1 chr1:109984431-109984931 ( 42) GGTGACGTCAC 1 chr5:17305906-17306406 ( 16) AATGATGTCAG 1 chr17:77233788-77234288 ( 12) GATGAGGTCAG 1 chr1:61141576-61142076 ( 11) ACTGATGTAAT 1 chr17:79993442-79993942 ( 89) CATGAGGTCAC 1 chr10:75379153-75379653 ( 35) AATAATGTCAT 1 chr5:139517800-139518300 ( 64) GATGAAGTCAC 1 chr16:4538620-4539120 ( 45) GATGACGTCAG 1 chr10:22552772-22553272 ( 56) CATGAGGTAAT 1 chr6:41767106-41767606 ( 36) GGTGACGTAAC 1 chr19:10416489-10416989 ( 79) GCTGACGTCAC 1 chr12:109573054-10957355 ( 5) CGTGAGGTCAC 1 chr10:50067632-50068132 ( 51) CCTGATGTCAC 1 chrX:2417966-2418466 ( 47) AGTTAGGTCAT 1 chr12:31749237-31749737 ( 58) AGTTATGTAAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGATGTCAY MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 11 n= 54000 bayes= 11.8723 E= 4.0e-036 25 -170 102 -155 145 -170 22 -1245 -1245 -1245 -1245 225 -355 -1245 168 -197 225 -1245 -1245 -1245 -355 -70 -44 149 -1245 -1245 178 -1245 -1245 -1245 -1245 225 -23 150 -1245 -1245 225 -1245 -1245 -1245 -1245 37 -244 145 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGATGTCAY MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 11 nsites= 56 E= 4.0e-036 0.250000 0.089286 0.589286 0.071429 0.571429 0.089286 0.339286 0.000000 0.000000 0.000000 0.000000 1.000000 0.017857 0.000000 0.928571 0.053571 1.000000 0.000000 0.000000 0.000000 0.017857 0.178571 0.214286 0.589286 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.178571 0.821429 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.375000 0.053571 0.571429 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GRTGATGTCAY MEME-3 regular expression -------------------------------------------------------------------------------- [GA][AG]TGA[TG]GTCA[TC] -------------------------------------------------------------------------------- Time 980.76 secs. ******************************************************************************** ******************************************************************************** MOTIF CCDCCBCCDCCYYCYCYYCCSC MEME-4 width = 22 sites = 146 llr = 1328 E-value = 4.2e-040 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCDCCBCCDCCYYCYCYYCCSC MEME-4 Description -------------------------------------------------------------------------------- Simplified A 1:2:::::2:1::111:::::: pos.-specific C 7727737817555747358558 probability G ::3:12113221:12:221231 matrix T 2233342141245132531321 bits 2.3 2.0 1.8 1.6 Relative 1.4 Entropy 1.1 * * (13.1 bits) 0.9 * * * * * * * 0.7 ** ** * * ** * * * 0.5 ** ***** * *** ***** * 0.2 ** ******************* 0.0 ---------------------- Multilevel CCTCCTCCTCCCTCCCTCCCCC consensus TTGTTC GGTTC T CT TG sequence G A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCDCCBCCDCCYYCYCYYCCSC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr14:103520904-10352140 + 45 1.76e-09 GCCcctccct cctcctcctcctcctcctcGCC GCGAGGGGCC chr6:63635860-63636360 + 8 9.39e-09 CACCGGG CCCCCTCCTCCTCCTCTTCGGC GGCGGCAGCG chr1:15526571-15527071 + 70 1.79e-08 CTCGGGCTTG TCCCCTCCTCTTTCCCCTCCCC AGGCCCAGG chr17:47649669-47650169 + 25 5.91e-08 TCCGAATAtc cctccgccttcctccctccctc gctccctccc chr1:234723925-234724425 - 10 8.57e-08 ACCTCCCTCC TCCCTTCCTCCCTCCCTCTCCC TCCATTTCT chr6:110958546-110959046 - 60 1.23e-07 GCGCTTACTA CCTCCTCTTCCTCGTCTTCTCC GTCCTCTGGA chr12:2812657-2813157 - 47 1.46e-07 GCTCGGGCGG CCTCTTCCACTTCCCTTGCCCC GTCCCTGCAC chr22:20496077-20496577 + 74 1.46e-07 cctcactcat tcactccctccctgtctccccc tctca chr17:48728679-48729179 + 60 1.74e-07 ctctcgctct ttctctcctctctctcttctcc ctctctctct chrX:120309457-120309957 + 66 2.06e-07 gctctcgcgc tctctctctctccctctccctc tgtatgtgtg chr3:194134798-194135298 + 7 3.97e-07 ccgtcg ccgccccccgcctccctgcccc cggGGCGCGC chr13:40770935-40771435 + 60 4.65e-07 GCTGCCAAAC ACGTCCCCGCCCTCTCTTCCGC TTCCGGCCTG chr13:113296750-11329725 + 11 4.65e-07 tcccgccact actcttcctcttccttttccGC GAACCCAGCC chr15:67254500-67255000 - 3 5.44e-07 TCCGAGAACG CCCTCTCCGGCCTGTCTCCCCC TC chr1:212665241-212665741 + 77 6.34e-07 actccccagc ttccctcttccctccctcctcc tt chr12:109998995-10999949 - 8 7.38e-07 TTCCGTCTAC CTGTCCCCAGCTTCTTTCCCCC TGCTCCA chr17:7836707-7837207 + 2 8.56e-07 G CTTCCTCCCCCTTCTATTCCCT CCCACCTCTG chr17:59209710-59210210 - 5 8.56e-07 CACTTGAGTT CCGCCTCCTCTTCTCCTCTCCT AGTT chr15:68277461-68277961 + 73 8.56e-07 AGCGTCCCTC CCGCTCCCGCCCTCTCCTCCCG GCCCTG chr1:155244581-155245081 - 1 9.92e-07 TCTCTCGCTC TCGCTCTCTCTCTCTCTCCGGC chr6:39114708-39115208 + 70 9.92e-07 AGAGTCGCTG CTGCTTCCGCCTTCTCTCCTGG GGTTTGTGC chr13:111153247-11115374 - 5 1.32e-06 CCGCGCGCGG CCACCGCCGCCTCCTCCTGTCC AGTC chr20:63658006-63658506 - 21 1.32e-06 CGGAGGGGGT CCGCCTGCTCTTCGGCTCCTCC AGGCCTACAC chr5:37371127-37371627 - 38 1.32e-06 CACCTACCGT ATCCCTCCTCCCTCCTTCCTCC TCACCCTATC chr21:25607267-25607767 + 38 1.52e-06 GCGCGCAAGT CCTTCTCCGCCCTCCTCCCCCG GAAACCGAAC chr17:7717032-7717532 - 27 1.52e-06 GCACCCTTGC CCTCCTGCTCCTTCCCCCTTCT TAGTTCGGAT chr12:2004296-2004796 + 65 1.52e-06 CCGGCTCCAG TCACCCCCACCCTCCTGCCCGC CGACAGACGC chr6:157323265-157323765 - 79 2.01e-06 . CCTCCGCCTGGTTCTCGCTTCC ACCCGGGCCC chr19:12669332-12669832 - 64 2.01e-06 CTATTGAAGC CCGCTTTCAGGTTCTTTTCCCC ATTTTCCCTT chr10:72320656-72321156 - 79 2.30e-06 . CTGCTTTCTGCCTCTCTGCGCC TTCCCCACCG chr1:154558608-154559108 + 29 2.30e-06 CTCCACGTGA TCTCTCCGTCTTTCCCGCCCCC CTGTTCTCGC chr19:38336560-38337060 - 14 2.63e-06 GCTCCTTATT CCGCCCCCTCCCTGTATTCCAC TCTTGCTCTT chr5:176388752-176389252 - 68 3.01e-06 GCGCTCTGGT CCTTCTCTACTTCCTTCCCTCC GACATCACTG chr11:47578718-47579218 + 51 3.01e-06 CCCGGAACCT CCGCTTCCGGCTCCACGTCCGC CCGGAAGAAG chr1:40691553-40692053 + 16 3.01e-06 TCCGTGACGC ACACTTCCCCCTCCCCTCCGCC GCGCCTGGGC chr6:85642959-85643459 + 74 3.01e-06 Tctggctcgc acgctccctcactccctccctc gctcg chr7:105012476-105012976 + 37 3.01e-06 CGCCCAAGCC CTGTCCCCTCCCCCGCCCCGGC CTGGGTCGGA chr16:21599214-21599714 - 28 3.43e-06 GTCGCTTTCT CCCCCGGCGCCCTCCCTCCGTC CAATGAGCGG chr17:59565174-59565674 - 21 3.90e-06 GGCCCGAAGA CCCCCTCTTGTTTCGCCTCTCC GGCGCCGAAG chrX:41084724-41085224 + 30 3.90e-06 GTGTGCCAGA TCTTTTCGGGCCTCCCTTCCCC AACTTCGGTC chr11:57741124-57741624 + 45 3.90e-06 CCGTCAGGCG CTTCCCGCACCTTCCCGCTCCC TGCTTGCAAA chr1:109984431-109984931 + 69 3.90e-06 GTGCCCTTTC TCCCCGCCTCTTCCCCCTCCCG GGAGCTGCCA chr21:28992655-28993155 + 51 4.43e-06 CCTGTAATAA CTTCCCCCGGGCCCTTTTCCGC CACCCACCCT chr4:102827326-102827826 + 41 4.43e-06 CAGCTGCCAC GCTCCGCCCCTCCCCCTCCTCC TGCCTCTTCA chr19:33080907-33081407 - 13 5.02e-06 CAGGCCAAAC GCCTTTCCTCTTTCTCCTCCGC GAACCCCGGT chr17:68511829-68512329 - 57 5.02e-06 CGCCTTTGTT CCTCCGCCTGCTCTTCGCTCTC TCTCCGCGCA chr20:58650922-58651422 - 75 5.68e-06 TGGC CCTCTTCCTGTCCGTCCCTCGC GAGTGCCCCC chrX:115892914-115893414 + 21 5.68e-06 CCTACCTGCC CTTCCCCCAGGTCCACTCCCTC CACCCTTTGC chr1:155000716-155001216 + 53 5.68e-06 CCTGCCGCTA CCTCCTCCTTCCTATAGCCCCC CTAATTCTCC chr12:53501174-53501674 - 17 6.42e-06 TCCTCTTCAC TCATTCCCTCCTCCGTCCCCGC GGGCGCCACC chr1:223846023-223846523 + 45 6.42e-06 CCCAGGGCTG CCGCCGTCACCTCCTCGGCGGC TCCGAGTCGT chr6:87155221-87155721 + 4 7.25e-06 TCA CCTCCCTCGGGCTCTCTCGCGC CACTCTCCCC chr19:17075084-17075584 + 39 7.25e-06 TCCTAACTCC CCACCTCCGCTGCCCATCCTCT CCAGCCCTAT chrX:72276895-72277395 - 41 7.25e-06 TAGGACGTAT CCGCCTCCATCCTCCCCCGGCC GGGGCTGCCC chr1:21345573-21346073 + 58 9.19e-06 TCGGCGACCT TTGTCTCCTGCCTGGCTCCTGC ACTGGAGTGT chr22:35840384-35840884 - 74 9.19e-06 CTTGC CCCTCCCTACCTCCTCCCCCCT ACACACACAC chr1:40257865-40258365 - 63 9.19e-06 ACGCCGATAC CCGCCCCCATCCCTCCCTCTGC GCGCTGCTGG chr19:35154707-35155207 + 51 1.03e-05 ACAGTGGGCC GCTCTGCCTCGCTCCCGCCCGC CTGCCTCAGT chr17:82273352-82273852 + 57 1.16e-05 CCTACCGGTC CCGCTTGCCCTCTCCCCGCCGC GGATGGACTC chr12:56079815-56080315 - 23 1.16e-05 AGGGGGTGAG TCACGGCCGCGCCCCCTCCCGC GCGAGGCTGG chr1:109484020-109484520 + 14 1.30e-05 GTGCCCGCCC GCTCCGTCACCTTCGCGCCTCC GGGTCCTAGC chr3:185498718-185499218 - 5 1.30e-05 CGCTTCTCGG CCTCCTTCTGGTCTTCGCCGGC TGCA chr1:53220270-53220770 + 51 1.30e-05 GCCTCCCAGA CCCTCGCCACCTCCCCTCCGTG TCCCCGCGGC chr11:114160001-11416050 - 79 1.30e-05 . TTGCCTCCTCCTTCACCCCACC CCAACCAGAT chr22:41446725-41447225 + 71 1.45e-05 GCCGGTCGTG CGTCCGGCTCCCCGTCTTCCCC TCCCTGTC chr17:21457040-21457540 - 13 1.45e-05 GCATAGGAGG GCACTGTCACCCTCCCTCCTGC TGTGCTGATT chr19:41310252-41310752 + 79 1.62e-05 CGCGGGCTGA CCTTCTTTTCCTCCATTCCTTC chr10:665534-666034 + 6 1.62e-05 ACGTG ACTCCTCCTCAGCCGCTTTCCC AAAACAAAAC chr17:5486461-5486961 - 54 1.62e-05 CTTATGCCAG TCTCGCCCGTCCCCGCTCCTCC TCAGAGAAAA chr1:226186676-226187176 + 25 1.62e-05 CCCGAACTCC CCTCCCCCGCACCCCATCCTTT CGGATCCCAG chr6:159726837-159727337 + 7 1.62e-05 CGGCGA GTACTTCCACCTTCCCTTCCCG TGATGCCCTG chr1:63523090-63523590 - 16 1.81e-05 CTAGAACTCC CCGCTCGCTCCTTTGCTCGCGC ACACCCGGAT chr19:36837964-36838464 + 51 1.81e-05 TCGCGATCGC TCGCCCCCACGCTCCCTCGCCG GCAAAGCCAC chr19:3721297-3721797 + 73 1.81e-05 CTGGCCGCGG CCGCCGGCCCCCTCTCGGCTGC GTGGAT chr15:72230393-72230893 - 3 1.81e-05 GCGTTCTGGT TCCCCTCCCGCGTCCATTCTCC AT chr6:35259367-35259867 - 35 1.81e-05 ACGGTCCACC CCGCCCCCCGCTTCGCCGCGGC AGCCATCCAA chr21:39313523-39314023 - 69 2.49e-05 GCCCAGGTCT TTGCCTCCGCGTCACTTTCTCC TCATCGAGTC chr1:46132563-46133063 + 66 2.49e-05 AAGCTGCTCT CCATCTCGACTTTCACGTCTCC CCACCGCTCT chr21:43728512-43729012 - 65 2.49e-05 AGCTCTCCGA CTCCCTTCCCCCTGCCGCCCGC GACACAAGCT chr17:50397313-50397813 + 7 2.49e-05 CCACTT CCGTGTCCACGTCACCTTCCGC GACCACTGAG chr17:59619503-59620003 + 21 2.77e-05 AAAAGTAGTC CCTCCGGTTCCTCTGTTTCCCC CCATGTGGCG chr15:70097493-70097993 + 31 2.77e-05 CCTTCCTTCC CCTCGGCCCGGCTCTCCTCTCC GCGCCCCGGC chr19:10653774-10654274 - 45 2.77e-05 CATCTGACAA CTTTTGGCGCCTTCCCTTTGCC GTACTGGGAG chr15:65792172-65792672 - 41 3.07e-05 GGCGACTTAG TCCCGCCCACCTTCACCGCCCC ATTATCAGTT chr17:75261500-75262000 - 11 3.40e-05 AAAAGGAAAC CCTTGCCCTCCCTGTATCCGTC GCAGTCTGGC chr10:97334607-97335107 - 16 3.40e-05 GCTTCGGTCA CCGCCCGCGCCGCCCTTTGCCC CCGTGCCTGC chr17:44014716-44015216 - 75 3.40e-05 TGTC CCATCCCCGCGCCTGCTTCTCT GACTGGGGTG chr13:30617562-30618062 + 65 3.40e-05 GGAAGTGCTC ACGTCTTCACCTTCCCCGCCAC GCCACCGTCC chr17:42388535-42389035 - 43 3.76e-05 GACATTCCGG TCATCTTCCCTCCCTCCCCCCG GGCTTCTGTG chr5:173144229-173144729 - 39 3.76e-05 CGTTTTCGCA CCACCTTCTTTCCCTCCCCACC CAGTCTCGGG chr10:102420915-10242141 - 77 3.76e-05 CT CTTCCCTCTCGGCCCCTCCGGT GCTCGGTACC chr12:49130979-49131479 + 59 3.76e-05 CCCCAGCGCC CCGCCGGCTCGCTTTTCCCTGC TTCCCTGAAA chr19:1021377-1021877 + 73 4.15e-05 CAGCTCGTCA CCTCGTTTGGCTTCTCTTGCCC GGATCC chr10:120851040-12085154 - 13 4.15e-05 CCGGGTTCCA CCGCTCCCGGATTCCATCGCCC CCAGGTTCCG chr19:14006677-14007177 + 53 4.15e-05 CGCGCGTCCC CCTTCCCCACTGCCCATGGCCC CGTCGGGGTT chr2:218568535-218569035 - 40 4.15e-05 ACCCCTGACC CCACCCACACATCCTCTTCCCG CCTCCAGGGC chr1:204516440-204516940 - 13 4.15e-05 ACTCTTCCCC TCCCCCCGAGCCCTTCTTCCGC CTGGCGCGGC chr1:183471813-183472313 - 23 4.58e-05 TGCCGATTTC CCTCTTCCTTTTTGCACGCCTC CACTCTTCCC chr17:45148373-45148873 - 3 4.58e-05 TGCTCTGCTC AGTTCTCCTCCGCCTCCTCCTC TT chr12:123601769-12360226 + 6 4.58e-05 CCGTC CCGCGGACGCCTTTCCTCCCTC CCGCGGCGTG chr16:30698034-30698534 - 4 5.04e-05 CAGCGAACCG CCGCTGCCGCTCCCGAGGCCTC ACC chrX:104156608-104157108 + 69 5.04e-05 GTGCTACAAA CCTCCGCCTCGCTCGCTGTCAT GGCGGCGACC chr5:134370969-134371469 - 47 5.04e-05 AACAGAAACA CTATCCCGTCTCCCTCCCCGTC ACTAGTTTAG chr11:120346989-12034748 + 28 5.04e-05 tttctttttc tttctttctttctctctgtctc tctctgtttc chr6:149963585-149964085 - 44 5.55e-05 GCTGACGCAA CTCTCCCCTCCGACCCGCCCCC GCGGCTTGGT chr19:1652597-1653097 - 3 6.10e-05 CCCGACCGCC TCCTCTGCGCGTCCCCGCTCCC AG chr15:64387518-64388018 - 2 6.70e-05 CAAGGTCGCA CCGCCTCCAGTGCAGATCCCGC C chr7:129054686-129055186 + 2 6.70e-05 A TCTCCTCCTCTTTGGCCGTTAC CAGGGCAGAA chr21:46324063-46324563 - 2 6.70e-05 CCCCTAATGT TTACCTTCGTCCTCCCGGCCTC C chr13:52194231-52194731 + 12 6.70e-05 AACACATCCC CCGCGCTCTCCTCCGTTTCCGG TCTGGCTTGT chr10:93702443-93702943 - 56 7.35e-05 AAGCTGGAAG CCTCTTCGTCCCTTTCCGGGCC GTTTCTCCCG chr21:42923979-42924479 - 20 7.35e-05 TACCCATTCT CCTCCCCCACCGCTCTCTCCTG AGGCCTGTAA chr4:77075915-77076415 - 44 8.05e-05 AGTGCCAACG ACTTCCCCAGCCCGTCTCCTTT CGGCCGCACT chr15:75368303-75368803 + 77 8.05e-05 GGCGCAGCCG CCATCGCCGGGCTCTCGCTCCT CT chr1:1375033-1375533 + 31 8.81e-05 CGCACAGCGC CCGCTGGCGTCCTCGCGGCCCC CGATTCTGCA chr12:109477298-10947779 - 31 8.81e-05 GAAGGAAAAC TTCCCCACACCTTGCCTCCCCT CTGGCAGCTG chr19:40750166-40750666 - 75 8.81e-05 CACT TTACTTCCTGACTCCTTTCCTT TTTCCAGTGG chr2:96638171-96638671 - 30 8.81e-05 CCGGGCTTTG CCGCTCACCGCCTCTCCCTTCC CAGGCCGTAA chr11:125625780-12562628 - 43 8.81e-05 TCTTTAGAAA CCTTCCCTACTCTACCGGCCGC CCTTCCTCAC chr2:27663605-27664105 - 29 9.63e-05 GTCTTTACGT TCCTGTCCACGTCCCACTCTCC CAAGCTCCCA chr19:11344437-11344937 - 27 9.63e-05 TCCCTGCTAG CTGCTGTTCCCTCTCCTCCCGC TGGCTGGGCC chr14:22982615-22983115 - 8 1.05e-04 TCCCCGTCCC CTACCCCCACACTCTTTCCTAT TCCAATT chr2:231786151-231786651 - 63 1.05e-04 CGGCGCTTTT CTGTCTCCGCCGACCCGTCGCC CGTGCAGCTC chr10:17201399-17201899 + 32 1.05e-04 CGCAGGGGCT CCATCCCCGCGCCTCAGCCGCC GCAGCCCCGG chr12:53451671-53452171 + 1 1.05e-04 . CTTTCTGCCCCCACGCTCCCTC TCTATCGCAA chr12:123232762-12323326 + 60 1.05e-04 CTCCTAAGTC TCGTCTCCTGTCCCCAGCGGCC TACAGCTCCC chr18:11688946-11689446 - 60 1.05e-04 ACCGTAAATG CCGCCGCCGGTCCAGCCCTCGC TACCGTAAAT chr1:36464172-36464672 - 25 1.15e-04 CCTAATCCAT TCTCTCGGTCTTCGTCTGCTCC GGTATTGCAA chr17:35587108-35587608 + 76 1.15e-04 CTGTGCTCTc cggctcccgccgccacccccgc cct chr1:167714438-167714938 - 39 1.25e-04 CTCCCAGAGC TTCCCTTCAGCCTTGTTCCGCC TCTCACCTCG chr7:100837182-100837682 - 22 1.36e-04 CAGAGCGTCC ACACCGCCGCTTTTTCTGCGGT TGCGTCCTGG chr6:151452128-151452628 + 2 1.48e-04 C CCTCCGCTGGCCCCGCCTTCGT CCCCGGAAGA chr16:30957527-30958027 + 8 1.61e-04 GTCGCAG CTTTCGTCGCCGCCGATTCGTC AAGGTCCCGG chr21:44339209-44339709 - 44 1.61e-04 CCACCTGCAC CCACCCTCTGCTCGCTGCGCGC TTCCGGGGTC chr15:65517374-65517874 - 66 1.61e-04 GAGGCCAAGG CCGCTGCTACTGCCGCCGCTGC TTCTTAGTGC chr1:26695328-26695828 + 61 1.61e-04 GGCTGAGGGC CTGCCGCCGCCGCGGCTTGTTC TCTCCCCTCC chr15:66883326-66883826 + 40 1.74e-04 TAATGACAAA TTCTTCCCTCCTCGCCCGCCAC TGGCAAAACC chr5:139341763-139342263 - 42 1.89e-04 TGCTGTCCCT CGACCTCCGCACCCCTGTCGCC ACTCTGCCCG chr18:35497703-35498203 + 30 2.05e-04 CCTTGGAACT TCCTTTCCGCTGTTACTTCCGT CTTGATGCTT chr18:70205532-70206032 + 75 2.22e-04 TTACGTGAGC CCTTCGCGGCCCCAGCGTCGCC AGGA chr14:90383176-90383676 + 76 2.59e-04 TGTGACGACA CCGCCGTGTGCTCCTCCGCTGG GAG chr19:55259062-55259562 + 51 2.59e-04 GTTTGGAAAT CCGTTCGCTGTTCTGTCTCCTC TAATCATAGT chr22:49970671-49971171 + 37 2.59e-04 GTGGCCGCTG CCACCGCGTGACTCACCCTCCC TTCACTCAAA chr15:67521232-67521732 + 47 2.79e-04 GCGCCAACTA CCACGTCCTGCGCACCGGCTGC TTCCCCTTCA chr12:27710685-27711185 + 32 3.24e-04 TTCTCCACTG CCGTCTACTCGGCCACTCCGGT CCCGACACCT chr19:37655821-37656321 + 77 6.92e-04 TGCTGAGTGA CGGCCGCCGCGCCCCCGCGTAC CT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCDCCBCCDCCYYCYCYYCCSC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:103520904-10352140 1.8e-09 44_[+4]_34 chr6:63635860-63636360 9.4e-09 7_[+4]_71 chr1:15526571-15527071 1.8e-08 69_[+4]_9 chr17:47649669-47650169 5.9e-08 24_[+4]_54 chr1:234723925-234724425 8.6e-08 9_[-4]_69 chr6:110958546-110959046 1.2e-07 59_[-4]_19 chr12:2812657-2813157 1.5e-07 46_[-4]_32 chr22:20496077-20496577 1.5e-07 73_[+4]_5 chr17:48728679-48729179 1.7e-07 59_[+4]_19 chrX:120309457-120309957 2.1e-07 65_[+4]_13 chr3:194134798-194135298 4e-07 6_[+4]_72 chr13:40770935-40771435 4.7e-07 59_[+4]_19 chr13:113296750-11329725 4.7e-07 10_[+4]_68 chr15:67254500-67255000 5.4e-07 2_[-4]_76 chr1:212665241-212665741 6.3e-07 76_[+4]_2 chr12:109998995-10999949 7.4e-07 7_[-4]_71 chr17:7836707-7837207 8.6e-07 1_[+4]_77 chr17:59209710-59210210 8.6e-07 4_[-4]_74 chr15:68277461-68277961 8.6e-07 72_[+4]_6 chr1:155244581-155245081 9.9e-07 [-4]_78 chr6:39114708-39115208 9.9e-07 69_[+4]_9 chr13:111153247-11115374 1.3e-06 4_[-4]_74 chr20:63658006-63658506 1.3e-06 20_[-4]_58 chr5:37371127-37371627 1.3e-06 37_[-4]_41 chr21:25607267-25607767 1.5e-06 37_[+4]_41 chr17:7717032-7717532 1.5e-06 26_[-4]_52 chr12:2004296-2004796 1.5e-06 64_[+4]_14 chr6:157323265-157323765 2e-06 78_[-4] chr19:12669332-12669832 2e-06 63_[-4]_15 chr10:72320656-72321156 2.3e-06 78_[-4] chr1:154558608-154559108 2.3e-06 28_[+4]_50 chr19:38336560-38337060 2.6e-06 13_[-4]_65 chr5:176388752-176389252 3e-06 67_[-4]_11 chr11:47578718-47579218 3e-06 50_[+4]_28 chr1:40691553-40692053 3e-06 15_[+4]_63 chr6:85642959-85643459 3e-06 73_[+4]_5 chr7:105012476-105012976 3e-06 36_[+4]_42 chr16:21599214-21599714 3.4e-06 27_[-4]_51 chr17:59565174-59565674 3.9e-06 20_[-4]_58 chrX:41084724-41085224 3.9e-06 29_[+4]_49 chr11:57741124-57741624 3.9e-06 44_[+4]_34 chr1:109984431-109984931 3.9e-06 68_[+4]_10 chr21:28992655-28993155 4.4e-06 50_[+4]_28 chr4:102827326-102827826 4.4e-06 40_[+4]_38 chr19:33080907-33081407 5e-06 12_[-4]_66 chr17:68511829-68512329 5e-06 56_[-4]_22 chr20:58650922-58651422 5.7e-06 74_[-4]_4 chrX:115892914-115893414 5.7e-06 20_[+4]_58 chr1:155000716-155001216 5.7e-06 52_[+4]_26 chr12:53501174-53501674 6.4e-06 16_[-4]_62 chr1:223846023-223846523 6.4e-06 44_[+4]_34 chr6:87155221-87155721 7.2e-06 3_[+4]_75 chr19:17075084-17075584 7.2e-06 38_[+4]_40 chrX:72276895-72277395 7.2e-06 40_[-4]_38 chr1:21345573-21346073 9.2e-06 57_[+4]_21 chr22:35840384-35840884 9.2e-06 73_[-4]_5 chr1:40257865-40258365 9.2e-06 62_[-4]_16 chr19:35154707-35155207 1e-05 50_[+4]_28 chr17:82273352-82273852 1.2e-05 56_[+4]_22 chr12:56079815-56080315 1.2e-05 22_[-4]_56 chr1:109484020-109484520 1.3e-05 13_[+4]_65 chr3:185498718-185499218 1.3e-05 4_[-4]_74 chr1:53220270-53220770 1.3e-05 50_[+4]_28 chr11:114160001-11416050 1.3e-05 78_[-4] chr22:41446725-41447225 1.5e-05 70_[+4]_8 chr17:21457040-21457540 1.5e-05 12_[-4]_66 chr19:41310252-41310752 1.6e-05 78_[+4] chr10:665534-666034 1.6e-05 5_[+4]_73 chr17:5486461-5486961 1.6e-05 53_[-4]_25 chr1:226186676-226187176 1.6e-05 24_[+4]_54 chr6:159726837-159727337 1.6e-05 6_[+4]_72 chr1:63523090-63523590 1.8e-05 15_[-4]_63 chr19:36837964-36838464 1.8e-05 50_[+4]_28 chr19:3721297-3721797 1.8e-05 72_[+4]_6 chr15:72230393-72230893 1.8e-05 2_[-4]_76 chr6:35259367-35259867 1.8e-05 34_[-4]_44 chr21:39313523-39314023 2.5e-05 68_[-4]_10 chr1:46132563-46133063 2.5e-05 65_[+4]_13 chr21:43728512-43729012 2.5e-05 64_[-4]_14 chr17:50397313-50397813 2.5e-05 6_[+4]_72 chr17:59619503-59620003 2.8e-05 20_[+4]_58 chr15:70097493-70097993 2.8e-05 30_[+4]_48 chr19:10653774-10654274 2.8e-05 44_[-4]_34 chr15:65792172-65792672 3.1e-05 40_[-4]_38 chr17:75261500-75262000 3.4e-05 10_[-4]_68 chr10:97334607-97335107 3.4e-05 15_[-4]_63 chr17:44014716-44015216 3.4e-05 74_[-4]_4 chr13:30617562-30618062 3.4e-05 64_[+4]_14 chr17:42388535-42389035 3.8e-05 42_[-4]_36 chr5:173144229-173144729 3.8e-05 38_[-4]_40 chr10:102420915-10242141 3.8e-05 76_[-4]_2 chr12:49130979-49131479 3.8e-05 58_[+4]_20 chr19:1021377-1021877 4.1e-05 72_[+4]_6 chr10:120851040-12085154 4.1e-05 12_[-4]_66 chr19:14006677-14007177 4.1e-05 52_[+4]_26 chr2:218568535-218569035 4.1e-05 39_[-4]_39 chr1:204516440-204516940 4.1e-05 12_[-4]_66 chr1:183471813-183472313 4.6e-05 22_[-4]_56 chr17:45148373-45148873 4.6e-05 2_[-4]_76 chr12:123601769-12360226 4.6e-05 5_[+4]_73 chr16:30698034-30698534 5e-05 3_[-4]_75 chrX:104156608-104157108 5e-05 68_[+4]_10 chr5:134370969-134371469 5e-05 46_[-4]_32 chr11:120346989-12034748 5e-05 27_[+4]_51 chr6:149963585-149964085 5.6e-05 43_[-4]_35 chr19:1652597-1653097 6.1e-05 2_[-4]_76 chr15:64387518-64388018 6.7e-05 1_[-4]_77 chr7:129054686-129055186 6.7e-05 1_[+4]_77 chr21:46324063-46324563 6.7e-05 1_[-4]_77 chr13:52194231-52194731 6.7e-05 11_[+4]_67 chr10:93702443-93702943 7.3e-05 55_[-4]_23 chr21:42923979-42924479 7.3e-05 19_[-4]_59 chr4:77075915-77076415 8e-05 43_[-4]_35 chr15:75368303-75368803 8e-05 76_[+4]_2 chr1:1375033-1375533 8.8e-05 30_[+4]_48 chr12:109477298-10947779 8.8e-05 30_[-4]_48 chr19:40750166-40750666 8.8e-05 74_[-4]_4 chr2:96638171-96638671 8.8e-05 29_[-4]_49 chr11:125625780-12562628 8.8e-05 42_[-4]_36 chr2:27663605-27664105 9.6e-05 28_[-4]_50 chr19:11344437-11344937 9.6e-05 26_[-4]_52 chr14:22982615-22983115 0.00011 7_[-4]_71 chr2:231786151-231786651 0.00011 62_[-4]_16 chr10:17201399-17201899 0.00011 31_[+4]_47 chr12:53451671-53452171 0.00011 [+4]_78 chr12:123232762-12323326 0.00011 59_[+4]_19 chr18:11688946-11689446 0.00011 59_[-4]_19 chr1:36464172-36464672 0.00011 24_[-4]_54 chr17:35587108-35587608 0.00011 75_[+4]_3 chr1:167714438-167714938 0.00013 38_[-4]_40 chr7:100837182-100837682 0.00014 21_[-4]_57 chr6:151452128-151452628 0.00015 1_[+4]_77 chr16:30957527-30958027 0.00016 7_[+4]_71 chr21:44339209-44339709 0.00016 43_[-4]_35 chr15:65517374-65517874 0.00016 65_[-4]_13 chr1:26695328-26695828 0.00016 60_[+4]_18 chr15:66883326-66883826 0.00017 39_[+4]_39 chr5:139341763-139342263 0.00019 41_[-4]_37 chr18:35497703-35498203 0.0002 29_[+4]_49 chr18:70205532-70206032 0.00022 74_[+4]_4 chr14:90383176-90383676 0.00026 75_[+4]_3 chr19:55259062-55259562 0.00026 50_[+4]_28 chr22:49970671-49971171 0.00026 36_[+4]_42 chr15:67521232-67521732 0.00028 46_[+4]_32 chr12:27710685-27711185 0.00032 31_[+4]_47 chr19:37655821-37656321 0.00069 76_[+4]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCDCCBCCDCCYYCYCYYCCSC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCDCCBCCDCCYYCYCYYCCSC width=22 seqs=146 chr14:103520904-10352140 ( 45) CCTCCTCCTCCTCCTCCTCGCC 1 chr6:63635860-63636360 ( 8) CCCCCTCCTCCTCCTCTTCGGC 1 chr1:15526571-15527071 ( 70) TCCCCTCCTCTTTCCCCTCCCC 1 chr17:47649669-47650169 ( 25) CCTCCGCCTTCCTCCCTCCCTC 1 chr1:234723925-234724425 ( 10) TCCCTTCCTCCCTCCCTCTCCC 1 chr6:110958546-110959046 ( 60) CCTCCTCTTCCTCGTCTTCTCC 1 chr12:2812657-2813157 ( 47) CCTCTTCCACTTCCCTTGCCCC 1 chr22:20496077-20496577 ( 74) TCACTCCCTCCCTGTCTCCCCC 1 chr17:48728679-48729179 ( 60) TTCTCTCCTCTCTCTCTTCTCC 1 chrX:120309457-120309957 ( 66) TCTCTCTCTCTCCCTCTCCCTC 1 chr3:194134798-194135298 ( 7) CCGCCCCCCGCCTCCCTGCCCC 1 chr13:40770935-40771435 ( 60) ACGTCCCCGCCCTCTCTTCCGC 1 chr13:113296750-11329725 ( 11) ACTCTTCCTCTTCCTTTTCCGC 1 chr15:67254500-67255000 ( 3) CCCTCTCCGGCCTGTCTCCCCC 1 chr1:212665241-212665741 ( 77) TTCCCTCTTCCCTCCCTCCTCC 1 chr12:109998995-10999949 ( 8) CTGTCCCCAGCTTCTTTCCCCC 1 chr17:7836707-7837207 ( 2) CTTCCTCCCCCTTCTATTCCCT 1 chr17:59209710-59210210 ( 5) CCGCCTCCTCTTCTCCTCTCCT 1 chr15:68277461-68277961 ( 73) CCGCTCCCGCCCTCTCCTCCCG 1 chr1:155244581-155245081 ( 1) TCGCTCTCTCTCTCTCTCCGGC 1 chr6:39114708-39115208 ( 70) CTGCTTCCGCCTTCTCTCCTGG 1 chr13:111153247-11115374 ( 5) CCACCGCCGCCTCCTCCTGTCC 1 chr20:63658006-63658506 ( 21) CCGCCTGCTCTTCGGCTCCTCC 1 chr5:37371127-37371627 ( 38) ATCCCTCCTCCCTCCTTCCTCC 1 chr21:25607267-25607767 ( 38) CCTTCTCCGCCCTCCTCCCCCG 1 chr17:7717032-7717532 ( 27) CCTCCTGCTCCTTCCCCCTTCT 1 chr12:2004296-2004796 ( 65) TCACCCCCACCCTCCTGCCCGC 1 chr6:157323265-157323765 ( 79) CCTCCGCCTGGTTCTCGCTTCC 1 chr19:12669332-12669832 ( 64) CCGCTTTCAGGTTCTTTTCCCC 1 chr10:72320656-72321156 ( 79) CTGCTTTCTGCCTCTCTGCGCC 1 chr1:154558608-154559108 ( 29) TCTCTCCGTCTTTCCCGCCCCC 1 chr19:38336560-38337060 ( 14) CCGCCCCCTCCCTGTATTCCAC 1 chr5:176388752-176389252 ( 68) CCTTCTCTACTTCCTTCCCTCC 1 chr11:47578718-47579218 ( 51) CCGCTTCCGGCTCCACGTCCGC 1 chr1:40691553-40692053 ( 16) ACACTTCCCCCTCCCCTCCGCC 1 chr6:85642959-85643459 ( 74) ACGCTCCCTCACTCCCTCCCTC 1 chr7:105012476-105012976 ( 37) CTGTCCCCTCCCCCGCCCCGGC 1 chr16:21599214-21599714 ( 28) CCCCCGGCGCCCTCCCTCCGTC 1 chr17:59565174-59565674 ( 21) CCCCCTCTTGTTTCGCCTCTCC 1 chrX:41084724-41085224 ( 30) TCTTTTCGGGCCTCCCTTCCCC 1 chr11:57741124-57741624 ( 45) CTTCCCGCACCTTCCCGCTCCC 1 chr1:109984431-109984931 ( 69) TCCCCGCCTCTTCCCCCTCCCG 1 chr21:28992655-28993155 ( 51) CTTCCCCCGGGCCCTTTTCCGC 1 chr4:102827326-102827826 ( 41) GCTCCGCCCCTCCCCCTCCTCC 1 chr19:33080907-33081407 ( 13) GCCTTTCCTCTTTCTCCTCCGC 1 chr17:68511829-68512329 ( 57) CCTCCGCCTGCTCTTCGCTCTC 1 chr20:58650922-58651422 ( 75) CCTCTTCCTGTCCGTCCCTCGC 1 chrX:115892914-115893414 ( 21) CTTCCCCCAGGTCCACTCCCTC 1 chr1:155000716-155001216 ( 53) CCTCCTCCTTCCTATAGCCCCC 1 chr12:53501174-53501674 ( 17) TCATTCCCTCCTCCGTCCCCGC 1 chr1:223846023-223846523 ( 45) CCGCCGTCACCTCCTCGGCGGC 1 chr6:87155221-87155721 ( 4) CCTCCCTCGGGCTCTCTCGCGC 1 chr19:17075084-17075584 ( 39) CCACCTCCGCTGCCCATCCTCT 1 chrX:72276895-72277395 ( 41) CCGCCTCCATCCTCCCCCGGCC 1 chr1:21345573-21346073 ( 58) TTGTCTCCTGCCTGGCTCCTGC 1 chr22:35840384-35840884 ( 74) CCCTCCCTACCTCCTCCCCCCT 1 chr1:40257865-40258365 ( 63) CCGCCCCCATCCCTCCCTCTGC 1 chr19:35154707-35155207 ( 51) GCTCTGCCTCGCTCCCGCCCGC 1 chr17:82273352-82273852 ( 57) CCGCTTGCCCTCTCCCCGCCGC 1 chr12:56079815-56080315 ( 23) TCACGGCCGCGCCCCCTCCCGC 1 chr1:109484020-109484520 ( 14) GCTCCGTCACCTTCGCGCCTCC 1 chr3:185498718-185499218 ( 5) CCTCCTTCTGGTCTTCGCCGGC 1 chr1:53220270-53220770 ( 51) CCCTCGCCACCTCCCCTCCGTG 1 chr11:114160001-11416050 ( 79) TTGCCTCCTCCTTCACCCCACC 1 chr22:41446725-41447225 ( 71) CGTCCGGCTCCCCGTCTTCCCC 1 chr17:21457040-21457540 ( 13) GCACTGTCACCCTCCCTCCTGC 1 chr19:41310252-41310752 ( 79) CCTTCTTTTCCTCCATTCCTTC 1 chr10:665534-666034 ( 6) ACTCCTCCTCAGCCGCTTTCCC 1 chr17:5486461-5486961 ( 54) TCTCGCCCGTCCCCGCTCCTCC 1 chr1:226186676-226187176 ( 25) CCTCCCCCGCACCCCATCCTTT 1 chr6:159726837-159727337 ( 7) GTACTTCCACCTTCCCTTCCCG 1 chr1:63523090-63523590 ( 16) CCGCTCGCTCCTTTGCTCGCGC 1 chr19:36837964-36838464 ( 51) TCGCCCCCACGCTCCCTCGCCG 1 chr19:3721297-3721797 ( 73) CCGCCGGCCCCCTCTCGGCTGC 1 chr15:72230393-72230893 ( 3) TCCCCTCCCGCGTCCATTCTCC 1 chr6:35259367-35259867 ( 35) CCGCCCCCCGCTTCGCCGCGGC 1 chr21:39313523-39314023 ( 69) TTGCCTCCGCGTCACTTTCTCC 1 chr1:46132563-46133063 ( 66) CCATCTCGACTTTCACGTCTCC 1 chr21:43728512-43729012 ( 65) CTCCCTTCCCCCTGCCGCCCGC 1 chr17:50397313-50397813 ( 7) CCGTGTCCACGTCACCTTCCGC 1 chr17:59619503-59620003 ( 21) CCTCCGGTTCCTCTGTTTCCCC 1 chr15:70097493-70097993 ( 31) CCTCGGCCCGGCTCTCCTCTCC 1 chr19:10653774-10654274 ( 45) CTTTTGGCGCCTTCCCTTTGCC 1 chr15:65792172-65792672 ( 41) TCCCGCCCACCTTCACCGCCCC 1 chr17:75261500-75262000 ( 11) CCTTGCCCTCCCTGTATCCGTC 1 chr10:97334607-97335107 ( 16) CCGCCCGCGCCGCCCTTTGCCC 1 chr17:44014716-44015216 ( 75) CCATCCCCGCGCCTGCTTCTCT 1 chr13:30617562-30618062 ( 65) ACGTCTTCACCTTCCCCGCCAC 1 chr17:42388535-42389035 ( 43) TCATCTTCCCTCCCTCCCCCCG 1 chr5:173144229-173144729 ( 39) CCACCTTCTTTCCCTCCCCACC 1 chr10:102420915-10242141 ( 77) CTTCCCTCTCGGCCCCTCCGGT 1 chr12:49130979-49131479 ( 59) CCGCCGGCTCGCTTTTCCCTGC 1 chr19:1021377-1021877 ( 73) CCTCGTTTGGCTTCTCTTGCCC 1 chr10:120851040-12085154 ( 13) CCGCTCCCGGATTCCATCGCCC 1 chr19:14006677-14007177 ( 53) CCTTCCCCACTGCCCATGGCCC 1 chr2:218568535-218569035 ( 40) CCACCCACACATCCTCTTCCCG 1 chr1:204516440-204516940 ( 13) TCCCCCCGAGCCCTTCTTCCGC 1 chr1:183471813-183472313 ( 23) CCTCTTCCTTTTTGCACGCCTC 1 chr17:45148373-45148873 ( 3) AGTTCTCCTCCGCCTCCTCCTC 1 chr12:123601769-12360226 ( 6) CCGCGGACGCCTTTCCTCCCTC 1 chr16:30698034-30698534 ( 4) CCGCTGCCGCTCCCGAGGCCTC 1 chrX:104156608-104157108 ( 69) CCTCCGCCTCGCTCGCTGTCAT 1 chr5:134370969-134371469 ( 47) CTATCCCGTCTCCCTCCCCGTC 1 chr11:120346989-12034748 ( 28) TTTCTTTCTTTCTCTCTGTCTC 1 chr6:149963585-149964085 ( 44) CTCTCCCCTCCGACCCGCCCCC 1 chr19:1652597-1653097 ( 3) TCCTCTGCGCGTCCCCGCTCCC 1 chr15:64387518-64388018 ( 2) CCGCCTCCAGTGCAGATCCCGC 1 chr7:129054686-129055186 ( 2) TCTCCTCCTCTTTGGCCGTTAC 1 chr21:46324063-46324563 ( 2) TTACCTTCGTCCTCCCGGCCTC 1 chr13:52194231-52194731 ( 12) CCGCGCTCTCCTCCGTTTCCGG 1 chr10:93702443-93702943 ( 56) CCTCTTCGTCCCTTTCCGGGCC 1 chr21:42923979-42924479 ( 20) CCTCCCCCACCGCTCTCTCCTG 1 chr4:77075915-77076415 ( 44) ACTTCCCCAGCCCGTCTCCTTT 1 chr15:75368303-75368803 ( 77) CCATCGCCGGGCTCTCGCTCCT 1 chr1:1375033-1375533 ( 31) CCGCTGGCGTCCTCGCGGCCCC 1 chr12:109477298-10947779 ( 31) TTCCCCACACCTTGCCTCCCCT 1 chr19:40750166-40750666 ( 75) TTACTTCCTGACTCCTTTCCTT 1 chr2:96638171-96638671 ( 30) CCGCTCACCGCCTCTCCCTTCC 1 chr11:125625780-12562628 ( 43) CCTTCCCTACTCTACCGGCCGC 1 chr2:27663605-27664105 ( 29) TCCTGTCCACGTCCCACTCTCC 1 chr19:11344437-11344937 ( 27) CTGCTGTTCCCTCTCCTCCCGC 1 chr14:22982615-22983115 ( 8) CTACCCCCACACTCTTTCCTAT 1 chr2:231786151-231786651 ( 63) CTGTCTCCGCCGACCCGTCGCC 1 chr10:17201399-17201899 ( 32) CCATCCCCGCGCCTCAGCCGCC 1 chr12:53451671-53452171 ( 1) CTTTCTGCCCCCACGCTCCCTC 1 chr12:123232762-12323326 ( 60) TCGTCTCCTGTCCCCAGCGGCC 1 chr18:11688946-11689446 ( 60) CCGCCGCCGGTCCAGCCCTCGC 1 chr1:36464172-36464672 ( 25) TCTCTCGGTCTTCGTCTGCTCC 1 chr17:35587108-35587608 ( 76) CGGCTCCCGCCGCCACCCCCGC 1 chr1:167714438-167714938 ( 39) TTCCCTTCAGCCTTGTTCCGCC 1 chr7:100837182-100837682 ( 22) ACACCGCCGCTTTTTCTGCGGT 1 chr6:151452128-151452628 ( 2) CCTCCGCTGGCCCCGCCTTCGT 1 chr16:30957527-30958027 ( 8) CTTTCGTCGCCGCCGATTCGTC 1 chr21:44339209-44339709 ( 44) CCACCCTCTGCTCGCTGCGCGC 1 chr15:65517374-65517874 ( 66) CCGCTGCTACTGCCGCCGCTGC 1 chr1:26695328-26695828 ( 61) CTGCCGCCGCCGCGGCTTGTTC 1 chr15:66883326-66883826 ( 40) TTCTTCCCTCCTCGCCCGCCAC 1 chr5:139341763-139342263 ( 42) CGACCTCCGCACCCCTGTCGCC 1 chr18:35497703-35498203 ( 30) TCCTTTCCGCTGTTACTTCCGT 1 chr18:70205532-70206032 ( 75) CCTTCGCGGCCCCAGCGTCGCC 1 chr14:90383176-90383676 ( 76) CCGCCGTGTGCTCCTCCGCTGG 1 chr19:55259062-55259562 ( 51) CCGTTCGCTGTTCTGTCTCCTC 1 chr22:49970671-49971171 ( 37) CCACCGCGTGACTCACCCTCCC 1 chr15:67521232-67521732 ( 47) CCACGTCCTGCGCACCGGCTGC 1 chr12:27710685-27711185 ( 32) CCGTCTACTCGGCCACTCCGGT 1 chr19:37655821-37656321 ( 77) CGGCCGCCGCGCCCCCGCGTAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCDCCBCCDCCYYCYCYYCCSC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 9.20103 E= 4.2e-040 -161 118 -282 15 -1383 136 -308 7 -29 -82 15 71 -1383 132 -1383 39 -1383 118 -195 35 -1383 18 -28 104 -261 124 -132 -35 -1383 155 -208 -135 7 -160 -12 100 -1383 124 -24 -161 -176 92 -95 19 -1383 68 -124 97 -335 74 -1383 124 -193 127 -124 -76 -161 48 -65 71 -93 133 -1383 -41 -1383 -5 -55 131 -1383 80 -76 62 -1383 143 -160 -76 -393 92 -71 31 -213 76 2 -35 -1383 145 -182 -76 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCDCCBCCDCCYYCYCYYCCSC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 146 E= 4.2e-040 0.068493 0.657534 0.041096 0.232877 0.000000 0.746575 0.034247 0.219178 0.171233 0.164384 0.321918 0.342466 0.000000 0.726027 0.000000 0.273973 0.000000 0.657534 0.075342 0.267123 0.000000 0.328767 0.239726 0.431507 0.034247 0.684932 0.116438 0.164384 0.000000 0.849315 0.068493 0.082192 0.219178 0.095890 0.267123 0.417808 0.000000 0.684932 0.246575 0.068493 0.061644 0.547945 0.150685 0.239726 0.000000 0.465753 0.123288 0.410959 0.020548 0.486301 0.000000 0.493151 0.054795 0.698630 0.123288 0.123288 0.068493 0.404110 0.184932 0.342466 0.109589 0.732877 0.000000 0.157534 0.000000 0.280822 0.198630 0.520548 0.000000 0.506849 0.171233 0.321918 0.000000 0.780822 0.095890 0.123288 0.013699 0.547945 0.178082 0.260274 0.047945 0.493151 0.294521 0.164384 0.000000 0.794521 0.082192 0.123288 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCDCCBCCDCCYYCYCYYCCSC MEME-4 regular expression -------------------------------------------------------------------------------- [CT][CT][TG][CT][CT][TCG]CC[TGA][CG][CT][CT][TC]C[CT]C[TC][CT]C[CT][CG]C -------------------------------------------------------------------------------- Time 1285.60 secs. ******************************************************************************** ******************************************************************************** MOTIF GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT MEME-5 width = 43 sites = 4 llr = 205 E-value = 6.7e-012 ******************************************************************************** -------------------------------------------------------------------------------- Motif GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT MEME-5 Description -------------------------------------------------------------------------------- Simplified A :::::::5::5::::33::a::::::::::5aa::::::a::: pos.-specific C ::::::a:a8:3:::::3a:::a:::38:a:::a38a5::aa: probability G aaa:::::::5:a::88:::aa::aa::::5::::3::a:::: matrix T :::aaa:5:3:8:aa::8:::::a::83a:::::8::5::::a bits 2.3 *** ** * * * ** * * 2.0 *** ** * * * ** * * 1.8 ******* * *** ******** ** *** * ***** 1.6 ******* * *** ******** ** *** * ***** Relative 1.4 ********* **** ********** ** **** * ***** Entropy 1.1 *********************************** ******* (74.1 bits) 0.9 ******************************************* 0.7 ******************************************* 0.5 ******************************************* 0.2 ******************************************* 0.0 ------------------------------------------- Multilevel GGGTTTCACCATGTTGGTCAGGCTGGTCTCAAACTCCCGACCT consensus T TGC AAC CT G CG T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------- chr17:4143092-4143592 - 20 2.28e-24 AGTAGAGACA GGGTTTCACCACGTTGGTCAGGCTGGTCTCGAACTCCTGACCT CAGGTGATCC chr19:44259431-44259931 + 58 7.45e-24 agtagagacg gggtttcaccatgttggccaggctggtctcaaactgctgacct chr7:139339827-139340327 + 46 2.18e-23 agtagagaca gggtttctctgtgttggtcaggctggtttcaaacccccgacct aagatgatcc chr20:35616591-35617091 + 29 2.64e-23 agtagagacg gggtttctccgtgttaatcaggctggcctcgaactcccgacct caggtgatcc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:4143092-4143592 2.3e-24 19_[-5]_38 chr19:44259431-44259931 7.5e-24 57_[+5] chr7:139339827-139340327 2.2e-23 45_[+5]_12 chr20:35616591-35617091 2.6e-23 28_[+5]_29 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT width=43 seqs=4 chr17:4143092-4143592 ( 20) GGGTTTCACCACGTTGGTCAGGCTGGTCTCGAACTCCTGACCT 1 chr19:44259431-44259931 ( 58) GGGTTTCACCATGTTGGCCAGGCTGGTCTCAAACTGCTGACCT 1 chr7:139339827-139340327 ( 46) GGGTTTCTCTGTGTTGGTCAGGCTGGTTTCAAACCCCCGACCT 1 chr20:35616591-35617091 ( 29) GGGTTTCTCCGTGTTAATCAGGCTGGCCTCGAACTCCCGACCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 43 n= 34800 bayes= 13.0866 E= 6.7e-012 -865 -865 178 -865 -865 -865 178 -865 -865 -865 178 -865 -865 -865 -865 225 -865 -865 -865 225 -865 -865 -865 225 -865 178 -865 -865 125 -865 -865 125 -865 178 -865 -865 -865 137 -865 25 125 -865 78 -865 -865 -22 -865 184 -865 -865 178 -865 -865 -865 -865 225 -865 -865 -865 225 25 -865 137 -865 25 -865 137 -865 -865 -22 -865 184 -865 178 -865 -865 225 -865 -865 -865 -865 -865 178 -865 -865 -865 178 -865 -865 178 -865 -865 -865 -865 -865 225 -865 -865 178 -865 -865 -865 178 -865 -865 -22 -865 184 -865 137 -865 25 -865 -865 -865 225 -865 178 -865 -865 125 -865 78 -865 225 -865 -865 -865 225 -865 -865 -865 -865 178 -865 -865 -865 -22 -865 184 -865 137 -22 -865 -865 178 -865 -865 -865 78 -865 125 -865 -865 178 -865 225 -865 -865 -865 -865 178 -865 -865 -865 178 -865 -865 -865 -865 -865 225 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 43 nsites= 4 E= 6.7e-012 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.000000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 0.750000 0.000000 0.250000 0.500000 0.000000 0.500000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.250000 0.000000 0.750000 0.000000 0.250000 0.000000 0.750000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.750000 0.000000 0.250000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.250000 0.000000 0.750000 0.000000 0.750000 0.250000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GGGTTTCWCCRTGTTGGTCAGGCTGGTCTCRAACTCCYGACCT MEME-5 regular expression -------------------------------------------------------------------------------- GGGTTTC[AT]C[CT][AG][TC]GTT[GA][GA][TC]CAGGCTGG[TC][CT]TC[AG]AAC[TC][CG]C[CT]GACCT -------------------------------------------------------------------------------- Time 1565.44 secs. ******************************************************************************** ******************************************************************************** MOTIF WYTKWYAWTTTATSHWVAGWDTATAATADWT MEME-6 width = 31 sites = 17 llr = 303 E-value = 1.0e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif WYTKWYAWTTTATSHWVAGWDTATAATADWT MEME-6 Description -------------------------------------------------------------------------------- Simplified A 52115183:23612252923226266:726: pos.-specific C :21::5212::2142:511:121:1:2:1:1 probability G 21:4:1:121:124123:52411112:23:: matrix T 4595541657716143::1546272281449 bits 2.3 2.0 1.8 * * 1.6 * * * * Relative 1.4 * * * * * ** Entropy 1.1 * * * ** * * * ** (25.7 bits) 0.9 * * * ** * ** *** ** 0.7 * *** ****** * * * ******* ** 0.5 * *********** *** * ******* ** 0.2 ******************************* 0.0 ------------------------------- Multilevel ATTTACATTTTATGTACAGTGTATAATATAT consensus TC GTT ACAA GCATG AAT TA GT sequence G C A A A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYTKWYAWTTTATSHWVAGWDTATAATADWT MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chrUn_KI270467v1:3049-35 + 16 6.20e-18 ttatgggtac tttgatattttatgtacagtatataatatat atttggggta chrUn_KI270467v1:2001-25 + 21 7.92e-15 tttggtgtac tttgagattttatgtacagaatataatatat ctttcatgta chrUn_KI270467v1:2847-33 + 50 5.77e-13 ttttgggtac tctgataatttacgtacagtatataatacat aatttgggta chr1:161764993-161765493 - 39 2.44e-10 AAACTAATAA ATTTTCACTTAAGGTGAAATTTATAACACTT TAATTCTCAC chr20:63339296-63339796 + 70 2.48e-09 AAGATGAGTG AATTACATCATATCCACAAAGACAAGTAAAT chr3:17730384-17730884 - 58 3.23e-09 AACAACAGTA ATATTTATTTACTCATGATTTTATGATTTTT GTAGGACTCA chr19:33293254-33293754 - 48 3.85e-09 TCCTGGAGCG ATTTACAATTTGCAAACACGTTTTATTTGAT TCCTGAGTTT chr1:68384286-68384786 - 67 6.43e-09 ATC ACTTTCCAGTTCTCATCAGTGAATCATGGTT GAGATCACCA chr20:63339942-63340442 + 34 6.99e-09 CAGATGAATG AATTACATCATATCCACACAGATGAATGAAT TACATCATAT chr9:137328155-137328655 - 65 2.31e-08 AGTTG TTTTTACTCATCATATGAGTGTATATTAGTT GTTTTTACTC chr3:57555938-57556438 + 33 2.69e-08 CTATCGTGTA GGTAAAAATTAATCTTCAGAGTATTACAGAC ATGCGTGCCC chr10:44752815-44753315 + 29 2.69e-08 AATAGGTGAA TATTTCATGGAGGAGAGAGGTTTTAATAGTT GTTTATACAA chr3:42819854-42820354 + 16 2.90e-08 ATTATGAGAC ACCATCTGTTTATCTTGATTGCATAATAAAT TGAGGACTCA chr17:46101138-46101638 - 10 2.90e-08 TGAAGCAGAT GTTGTTCTTATTTGCAGAGGTCAATTTATAT GTTTAGGAT chr20:62088359-62088859 - 10 3.12e-08 TCTCAGCTCC ACTGTTATCTTATGGGACAACCATTATATAT GCAGTCCGT chr1:11178277-11178777 - 35 3.62e-08 GTCAAGAAGT GTTGACAAGTAAGATAAAGTTGGAAGTAATT AACTGGCTGA chr1:28648532-28649032 + 9 1.45e-07 TTCTTTAC TGTTATATGTTAGGCGAAATATTACGCGTTT GGAGTAAGTG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYTKWYAWTTTATSHWVAGWDTATAATADWT MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrUn_KI270467v1:3049-35 6.2e-18 15_[+6]_54 chrUn_KI270467v1:2001-25 7.9e-15 20_[+6]_49 chrUn_KI270467v1:2847-33 5.8e-13 49_[+6]_20 chr1:161764993-161765493 2.4e-10 38_[-6]_31 chr20:63339296-63339796 2.5e-09 69_[+6] chr3:17730384-17730884 3.2e-09 57_[-6]_12 chr19:33293254-33293754 3.9e-09 47_[-6]_22 chr1:68384286-68384786 6.4e-09 66_[-6]_3 chr20:63339942-63340442 7e-09 33_[+6]_36 chr9:137328155-137328655 2.3e-08 64_[-6]_5 chr3:57555938-57556438 2.7e-08 32_[+6]_37 chr10:44752815-44753315 2.7e-08 28_[+6]_41 chr3:42819854-42820354 2.9e-08 15_[+6]_54 chr17:46101138-46101638 2.9e-08 9_[-6]_60 chr20:62088359-62088859 3.1e-08 9_[-6]_60 chr1:11178277-11178777 3.6e-08 34_[-6]_35 chr1:28648532-28649032 1.4e-07 8_[+6]_61 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYTKWYAWTTTATSHWVAGWDTATAATADWT MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WYTKWYAWTTTATSHWVAGWDTATAATADWT width=31 seqs=17 chrUn_KI270467v1:3049-35 ( 16) TTTGATATTTTATGTACAGTATATAATATAT 1 chrUn_KI270467v1:2001-25 ( 21) TTTGAGATTTTATGTACAGAATATAATATAT 1 chrUn_KI270467v1:2847-33 ( 50) TCTGATAATTTACGTACAGTATATAATACAT 1 chr1:161764993-161765493 ( 39) ATTTTCACTTAAGGTGAAATTTATAACACTT 1 chr20:63339296-63339796 ( 70) AATTACATCATATCCACAAAGACAAGTAAAT 1 chr3:17730384-17730884 ( 58) ATATTTATTTACTCATGATTTTATGATTTTT 1 chr19:33293254-33293754 ( 48) ATTTACAATTTGCAAACACGTTTTATTTGAT 1 chr1:68384286-68384786 ( 67) ACTTTCCAGTTCTCATCAGTGAATCATGGTT 1 chr20:63339942-63340442 ( 34) AATTACATCATATCCACACAGATGAATGAAT 1 chr9:137328155-137328655 ( 65) TTTTTACTCATCATATGAGTGTATATTAGTT 1 chr3:57555938-57556438 ( 33) GGTAAAAATTAATCTTCAGAGTATTACAGAC 1 chr10:44752815-44753315 ( 29) TATTTCATGGAGGAGAGAGGTTTTAATAGTT 1 chr3:42819854-42820354 ( 16) ACCATCTGTTTATCTTGATTGCATAATAAAT 1 chr17:46101138-46101638 ( 10) GTTGTTCTTATTTGCAGAGGTCAATTTATAT 1 chr20:62088359-62088859 ( 10) ACTGTTATCTTATGGGACAACCATTATATAT 1 chr1:11178277-11178777 ( 35) GTTGACAAGTAAGATAAAGTTGGAAGTAATT 1 chr1:28648532-28649032 ( 9) TGTTATATGTTAGGCGAAATATTACGCGTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYTKWYAWTTTATSHWVAGWDTATAATADWT MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 13.036 E= 1.0e-005 117 -1073 -72 75 -25 -30 -130 117 -183 -230 -1073 207 -83 -1073 28 134 134 -1073 -1073 117 -83 70 -230 75 187 -72 -1073 -183 49 -230 -230 149 -1073 -30 -30 134 17 -1073 -230 175 49 -1073 -1073 175 163 -72 -130 -183 -183 -130 -30 149 -25 28 50 -183 17 -30 -130 97 134 -1073 -72 49 17 70 2 -1073 217 -230 -1073 -1073 17 -130 87 -83 49 -1073 -72 134 17 -230 28 75 -25 -72 -230 149 163 -230 -230 17 17 -1073 -230 175 163 -130 -230 -25 163 -1073 -72 -25 -1073 -72 -1073 197 175 -1073 -72 -83 17 -130 2 75 149 -1073 -1073 97 -1073 -230 -1073 217 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYTKWYAWTTTATSHWVAGWDTATAATADWT MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 17 E= 1.0e-005 0.470588 0.000000 0.176471 0.352941 0.176471 0.235294 0.117647 0.470588 0.058824 0.058824 0.000000 0.882353 0.117647 0.000000 0.352941 0.529412 0.529412 0.000000 0.000000 0.470588 0.117647 0.470588 0.058824 0.352941 0.764706 0.176471 0.000000 0.058824 0.294118 0.058824 0.058824 0.588235 0.000000 0.235294 0.235294 0.529412 0.235294 0.000000 0.058824 0.705882 0.294118 0.000000 0.000000 0.705882 0.647059 0.176471 0.117647 0.058824 0.058824 0.117647 0.235294 0.588235 0.176471 0.352941 0.411765 0.058824 0.235294 0.235294 0.117647 0.411765 0.529412 0.000000 0.176471 0.294118 0.235294 0.470588 0.294118 0.000000 0.941176 0.058824 0.000000 0.000000 0.235294 0.117647 0.529412 0.117647 0.294118 0.000000 0.176471 0.529412 0.235294 0.058824 0.352941 0.352941 0.176471 0.176471 0.058824 0.588235 0.647059 0.058824 0.058824 0.235294 0.235294 0.000000 0.058824 0.705882 0.647059 0.117647 0.058824 0.176471 0.647059 0.000000 0.176471 0.176471 0.000000 0.176471 0.000000 0.823529 0.705882 0.000000 0.176471 0.117647 0.235294 0.117647 0.294118 0.352941 0.588235 0.000000 0.000000 0.411765 0.000000 0.058824 0.000000 0.941176 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WYTKWYAWTTTATSHWVAGWDTATAATADWT MEME-6 regular expression -------------------------------------------------------------------------------- [AT][TC]T[TG][AT][CT]A[TA][TCG][TA][TA]A[TG][GC][TAC][AT][CGA]A[GA][TA][GTA]T[AT][TA]AATA[TGA][AT]T -------------------------------------------------------------------------------- Time 1843.60 secs. ******************************************************************************** ******************************************************************************** MOTIF AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC MEME-7 width = 43 sites = 8 llr = 255 E-value = 2.6e-010 ******************************************************************************** -------------------------------------------------------------------------------- Motif AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC MEME-7 Description -------------------------------------------------------------------------------- Simplified A a651:3::3:1::43:6a113336:5:::313:1:::a31::1 pos.-specific C :11:6:451:491451::3663:::::431::::1a:::3a88 probability G :349:8:3483111334:33:484a5::8:88a1::a:5:::: matrix T ::::4:63333:81:6::4:11::::a6:61::89:::36:31 bits 2.3 * * * * 2.0 * * * * 1.8 * * * * * *** * 1.6 * * * * * **** * Relative 1.4 * * * * * * **** * Entropy 1.1 * * ** * ** ** ****** ******* ** (45.9 bits) 0.9 * **** * ** ** **************** **** 0.7 ******* * ** *** * **************** **** 0.5 ******** * ** **** ** ********************* 0.2 ********** ********** ********************* 0.0 ------------------------------------------- Multilevel AAAGCGTCGGCCTACTAATCCGGAGATTGTGGGTTCGAGTCCC consensus GG TACGATG CAGG CGAAAG G CCA A AC T sequence TT T G G C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------- chr7:139340516-139341016 + 4 4.35e-20 gat aaggcattggcctcctaagccagggattgtgggttcgagtccc atctggggtG chr19:33176853-33177353 + 25 1.95e-18 ttagttggtt aaagcgcctgtctagtaaacaggagatcctgggttcgaatccc agcggtgcct chr17:68019698-68020198 - 9 1.03e-17 CCTAATGGAT AAGGCATCAGCCTCCGGAGCTGGGGATTGTGGGTTCGAGTCCC ATCTGGGT chr17:75034885-75035385 + 48 1.33e-17 cctaatggat aaggcgtctgacttcggatcagaagattgagggttcgagtccc ttcgtggtcg chr14:102316875-10231737 + 38 2.99e-15 tcagttggtt agagcgtggtgctaataacgccaaggtcgcgggttcgatcccc gtacgggcca chr19:39411965-39412465 - 13 9.06e-14 TACTTATATG ACAGTGCGAGCGGAGCAATGCCGAGGTTGTGAGTTCGATCCTC ACCTGGAGCA chr17:82494482-82494982 - 49 3.03e-13 CGCAGCGGA AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAAACCA TCCTCTGCTA chr12:124914567-12491506 + 40 8.40e-13 GTCCCGTCCT AAAATGTCCTTCTGCTGATACTGGGGTTCTAAGGCCGAGTCTT ATGAGCAGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr7:139340516-139341016 4.3e-20 3_[+7]_54 chr19:33176853-33177353 1.9e-18 24_[+7]_33 chr17:68019698-68020198 1e-17 8_[-7]_49 chr17:75034885-75035385 1.3e-17 47_[+7]_10 chr14:102316875-10231737 3e-15 37_[+7]_20 chr19:39411965-39412465 9.1e-14 12_[-7]_45 chr17:82494482-82494982 3e-13 48_[-7]_9 chr12:124914567-12491506 8.4e-13 39_[+7]_18 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC width=43 seqs=8 chr7:139340516-139341016 ( 4) AAGGCATTGGCCTCCTAAGCCAGGGATTGTGGGTTCGAGTCCC 1 chr19:33176853-33177353 ( 25) AAAGCGCCTGTCTAGTAAACAGGAGATCCTGGGTTCGAATCCC 1 chr17:68019698-68020198 ( 9) AAGGCATCAGCCTCCGGAGCTGGGGATTGTGGGTTCGAGTCCC 1 chr17:75034885-75035385 ( 48) AAGGCGTCTGACTTCGGATCAGAAGATTGAGGGTTCGAGTCCC 1 chr14:102316875-10231737 ( 38) AGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCC 1 chr19:39411965-39412465 ( 13) ACAGTGCGAGCGGAGCAATGCCGAGGTTGTGAGTTCGATCCTC 1 chr17:82494482-82494982 ( 49) AGCGTGCTGGGCCCATAACCCAGAGGTCGATGGATCGAAACCA 1 chr12:124914567-12491506 ( 40) AAAATGTCCTTCTGCTGATACTGGGGTTCTAAGGCCGAGTCTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 43 n= 34800 bayes= 12.0865 E= 2.6e-010 225 -965 -965 -965 158 -121 -22 -965 125 -121 37 -965 -74 -965 159 -965 -965 110 -965 84 25 -965 137 -965 -965 37 -965 158 -965 78 -22 25 25 -121 37 25 -965 -965 137 25 -74 37 -22 25 -965 159 -121 -965 -965 -121 -121 184 84 37 -121 -74 25 78 -22 -965 -965 -121 -22 158 158 -965 37 -965 225 -965 -965 -965 -74 -22 -22 84 -74 110 -22 -965 25 110 -965 -74 25 -22 37 -74 25 -965 137 -965 158 -965 37 -965 -965 -965 178 -965 125 -965 78 -965 -965 -965 -965 225 -965 37 -965 158 -965 -22 137 -965 25 -121 -965 158 -74 -965 137 -74 25 -965 137 -965 -965 -965 178 -965 -74 -965 -121 184 -965 -121 -965 206 -965 178 -965 -965 -965 -965 178 -965 225 -965 -965 -965 25 -965 78 25 -74 -22 -965 158 -965 178 -965 -965 -965 137 -965 25 -74 137 -965 -74 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 43 nsites= 8 E= 2.6e-010 1.000000 0.000000 0.000000 0.000000 0.625000 0.125000 0.250000 0.000000 0.500000 0.125000 0.375000 0.000000 0.125000 0.000000 0.875000 0.000000 0.000000 0.625000 0.000000 0.375000 0.250000 0.000000 0.750000 0.000000 0.000000 0.375000 0.000000 0.625000 0.000000 0.500000 0.250000 0.250000 0.250000 0.125000 0.375000 0.250000 0.000000 0.000000 0.750000 0.250000 0.125000 0.375000 0.250000 0.250000 0.000000 0.875000 0.125000 0.000000 0.000000 0.125000 0.125000 0.750000 0.375000 0.375000 0.125000 0.125000 0.250000 0.500000 0.250000 0.000000 0.000000 0.125000 0.250000 0.625000 0.625000 0.000000 0.375000 0.000000 1.000000 0.000000 0.000000 0.000000 0.125000 0.250000 0.250000 0.375000 0.125000 0.625000 0.250000 0.000000 0.250000 0.625000 0.000000 0.125000 0.250000 0.250000 0.375000 0.125000 0.250000 0.000000 0.750000 0.000000 0.625000 0.000000 0.375000 0.000000 0.000000 0.000000 1.000000 0.000000 0.500000 0.000000 0.500000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.375000 0.000000 0.625000 0.000000 0.250000 0.750000 0.000000 0.250000 0.125000 0.000000 0.625000 0.125000 0.000000 0.750000 0.125000 0.250000 0.000000 0.750000 0.000000 0.000000 0.000000 1.000000 0.000000 0.125000 0.000000 0.125000 0.750000 0.000000 0.125000 0.000000 0.875000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.250000 0.000000 0.500000 0.250000 0.125000 0.250000 0.000000 0.625000 0.000000 1.000000 0.000000 0.000000 0.000000 0.750000 0.000000 0.250000 0.125000 0.750000 0.000000 0.125000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AARGYGYBDGBCTMVTRABCCVGRGRTYGTGGGTTCGADTCCC MEME-7 regular expression -------------------------------------------------------------------------------- A[AG][AG]G[CT][GA][TC][CGT][GAT][GT][CGT]CT[AC][CAG][TG][AG]A[TCG][CG][CA][GAC][GA][AG]G[AG]T[TC][GC][TA]G[GA]GTTCGA[GAT][TC]C[CT]C -------------------------------------------------------------------------------- Time 2115.08 secs. ******************************************************************************** ******************************************************************************** MOTIF GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC MEME-8 width = 42 sites = 5 llr = 214 E-value = 2.5e-010 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC MEME-8 Description -------------------------------------------------------------------------------- Simplified A ::24:::2:2:::::a4::::a::64::::::8:22::82:2 pos.-specific C ::::a28:a:6a2:2:::aa8::a:66:6::::::86::::8 probability G a286:4:8:82::a::6:::::a::::::aaa2a8::a:8a: matrix T :8:::42:::2:8:8::a::2:::4:4a4:::::::4:2::: bits 2.3 * * * * 2.0 * * * * 1.8 * * * * * * *** *** * *** * * * 1.6 * * * * * * *** *** * *** * ** * Relative 1.4 ** * * ***** *** **** * ***** ** * Entropy 1.1 *** * **** ***** ******** * ******* ***** (61.7 bits) 0.9 ***** **** ******************************* 0.7 ***** **** ******************************* 0.5 ****************************************** 0.2 ****************************************** 0.0 ------------------------------------------ Multilevel GTGGCGCGCGCCTGTAGTCCCAGCACCTCGGGAGGCCGAGGC consensus GAA TTA AG C C A T TAT T G AAT TA A sequence C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------ chr22:37844463-37844963 - 19 8.39e-23 GCTGGGCGTG GTGGCGCGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC AGGAGAATTG chr1:150876772-150877272 + 20 1.06e-22 gctgggcgcg gtggctcgcgtctgtaatcccagcactttgggaggccgaggc ggccggatca chr12:55829108-55829608 + 1 9.94e-22 . gtggcgcgcacctgtagtcccagctactcgggaggctgaggc agaagaatcg chr6:30907548-30908048 - 19 2.50e-21 GCCGGGCGCG GTGACTCACGCCTGTAATCCTAGCACTTTGGGAGGCCGAGGC GGCGAATCAC chr12:109052312-10905281 - 37 1.15e-16 CCGAGACAGC GGAACCTGCGGCCGCAGTCCCAGCACCTCGGGGGAACGTAGA CCGCAGGACA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr22:37844463-37844963 8.4e-23 18_[-8]_40 chr1:150876772-150877272 1.1e-22 19_[+8]_39 chr12:55829108-55829608 9.9e-22 [+8]_58 chr6:30907548-30908048 2.5e-21 18_[-8]_40 chr12:109052312-10905281 1.2e-16 36_[-8]_22 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC width=42 seqs=5 chr22:37844463-37844963 ( 19) GTGGCGCGCGCCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC 1 chr1:150876772-150877272 ( 20) GTGGCTCGCGTCTGTAATCCCAGCACTTTGGGAGGCCGAGGC 1 chr12:55829108-55829608 ( 1) GTGGCGCGCACCTGTAGTCCCAGCTACTCGGGAGGCTGAGGC 1 chr6:30907548-30908048 ( 19) GTGACTCACGCCTGTAATCCTAGCACTTTGGGAGGCCGAGGC 1 chr12:109052312-10905281 ( 37) GGAACCTGCGGCCGCAGTCCCAGCACCTCGGGGGAACGTAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 42 n= 35400 bayes= 12.2236 E= 2.5e-010 -897 -897 178 -897 -897 -897 -54 193 -7 -897 146 -897 93 -897 104 -897 -897 178 -897 -897 -897 -54 46 93 -897 146 -897 -7 -7 -897 146 -897 -897 178 -897 -897 -7 -897 146 -897 -897 104 -54 -7 -897 178 -897 -897 -897 -54 -897 193 -897 -897 178 -897 -897 -54 -897 193 225 -897 -897 -897 93 -897 104 -897 -897 -897 -897 225 -897 178 -897 -897 -897 178 -897 -897 -897 146 -897 -7 225 -897 -897 -897 -897 -897 178 -897 -897 178 -897 -897 152 -897 -897 93 93 104 -897 -897 -897 104 -897 93 -897 -897 -897 225 -897 104 -897 93 -897 -897 178 -897 -897 -897 178 -897 -897 -897 178 -897 193 -897 -54 -897 -897 -897 178 -897 -7 -897 146 -897 -7 146 -897 -897 -897 104 -897 93 -897 -897 178 -897 193 -897 -897 -7 -7 -897 146 -897 -897 -897 178 -897 -7 146 -897 -897 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 42 nsites= 5 E= 2.5e-010 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.200000 0.800000 0.200000 0.000000 0.800000 0.000000 0.400000 0.000000 0.600000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.200000 0.400000 0.400000 0.000000 0.800000 0.000000 0.200000 0.200000 0.000000 0.800000 0.000000 0.000000 1.000000 0.000000 0.000000 0.200000 0.000000 0.800000 0.000000 0.000000 0.600000 0.200000 0.200000 0.000000 1.000000 0.000000 0.000000 0.000000 0.200000 0.000000 0.800000 0.000000 0.000000 1.000000 0.000000 0.000000 0.200000 0.000000 0.800000 1.000000 0.000000 0.000000 0.000000 0.400000 0.000000 0.600000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.800000 0.000000 0.200000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.600000 0.000000 0.000000 0.400000 0.400000 0.600000 0.000000 0.000000 0.000000 0.600000 0.000000 0.400000 0.000000 0.000000 0.000000 1.000000 0.000000 0.600000 0.000000 0.400000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.800000 0.000000 0.200000 0.000000 0.000000 0.000000 1.000000 0.000000 0.200000 0.000000 0.800000 0.000000 0.200000 0.800000 0.000000 0.000000 0.000000 0.600000 0.000000 0.400000 0.000000 0.000000 1.000000 0.000000 0.800000 0.000000 0.000000 0.200000 0.200000 0.000000 0.800000 0.000000 0.000000 0.000000 1.000000 0.000000 0.200000 0.800000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGRCBCGCGCCTGTARTCCCAGCWMYTYGGGAGGCYGAGGC MEME-8 regular expression -------------------------------------------------------------------------------- G[TG][GA][GA]C[GTC][CT][GA]C[GA][CGT]C[TC]G[TC]A[GA]TCC[CT]AGC[AT][CA][CT]T[CT]GGG[AG]G[GA][CA][CT]G[AT][GA]G[CA] -------------------------------------------------------------------------------- Time 2386.94 secs. ******************************************************************************** ******************************************************************************** MOTIF TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG MEME-9 width = 42 sites = 7 llr = 221 E-value = 9.1e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG MEME-9 Description -------------------------------------------------------------------------------- Simplified A ::61:7::1161::1::4:1::9:4:19:::1:16:33:3:1 pos.-specific C ::::3::::1:::::3:1:::6:1::3::::1:3::3:3::: probability G 194:61:a344:7a6:9139:3:36141:7944614413439 matrix T 91:911a:63:93:37137:a116:91:a3136:36:6437: bits 2.3 * * * 2.0 * * * 1.8 ** * * * 1.6 * * ** * * * * * ** Relative 1.4 ** * ** * * ** *** * * ** * ** Entropy 1.1 **** *** **** ** *** * * **** * * ** (45.6 bits) 0.9 **** *** **** ** *** * ** **** * ** * ** 0.7 **** **** ******* *** **** **** * ** * ** 0.5 ********* ******* ******** **** ********** 0.2 ************************** *************** 0.0 ------------------------------------------ Multilevel TGATGATGTGATGGGTGATGTCATGTGATGGGTGATGTTGTG consensus G C GTG T TC TG G GA C T TGCTGAACAG sequence C GT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------ chr17:74514179-74514679 + 43 2.49e-22 atgtgacaag tgatcatgtgatgggtgatgtcatatcatgggtgatgtcatg tgacaggtga chr17:74514457-74514957 + 7 2.48e-18 gatggg tgatcatgtgatgggtgctgtcatgtaatgggtggtcatgtg atgggtgatg chr17:74513974-74514474 + 43 3.80e-18 gtcatgtgat gggtgatgggatgggcgatgtcatgtgatgggtgatcatgtg acaggtgatg chr17:1293394-1293894 + 4 4.70e-14 GTT TGATGATGTCGTGGGTTGTGTTTGATGATGTCGCAGGTTGGG TTTGATGATG chr12:130584380-13058488 - 55 5.00e-14 ATAG TGATGATGTAATGGTTGTGATGAGGTGATGGTGATGAGGTGA TGGCAGTGAT chr12:130765131-13076563 + 7 8.60e-14 GTGATG TGGTGTTGATGATGTCGTGGTGATGTCATTGTGCTGATGTTG TGTTGATGTC chr12:130764530-13076503 + 2 1.10e-12 A TTGATGTGGTGTTGATGATGTCACAGTGTTGATGATGTCATG GTGCTGATGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:74514179-74514679 2.5e-22 42_[+9]_16 chr17:74514457-74514957 2.5e-18 6_[+9]_52 chr17:74513974-74514474 3.8e-18 42_[+9]_16 chr17:1293394-1293894 4.7e-14 3_[+9]_55 chr12:130584380-13058488 5e-14 54_[-9]_4 chr12:130765131-13076563 8.6e-14 6_[+9]_52 chr12:130764530-13076503 1.1e-12 1_[+9]_57 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG width=42 seqs=7 chr17:74514179-74514679 ( 43) TGATCATGTGATGGGTGATGTCATATCATGGGTGATGTCATG 1 chr17:74514457-74514957 ( 7) TGATCATGTGATGGGTGCTGTCATGTAATGGGTGGTCATGTG 1 chr17:74513974-74514474 ( 43) GGGTGATGGGATGGGCGATGTCATGTGATGGGTGATCATGTG 1 chr17:1293394-1293894 ( 4) TGATGATGTCGTGGGTTGTGTTTGATGATGTCGCAGGTTGGG 1 chr12:130584380-13058488 ( 55) TGATGATGTAATGGTTGTGATGAGGTGATGGTGATGAGGTGA 1 chr12:130765131-13076563 ( 7) TGGTGTTGATGATGTCGTGGTGATGTCATTGTGCTGATGTTG 1 chr12:130764530-13076503 ( 2) TTGATGTGGTGTTGATGATGTCACAGTGTTGATGATGTCATG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 42 n= 35400 bayes= 13.5264 E= 9.1e-004 -945 -945 -102 203 -945 -945 156 -55 145 -945 56 -945 -55 -945 -945 203 -945 -2 98 -55 177 -945 -102 -55 -945 -945 -945 225 -945 -945 178 -945 -55 -945 -2 145 -55 -102 56 45 145 -945 56 -945 -55 -945 -945 203 -945 -945 130 45 -945 -945 178 -945 -55 -945 98 45 -945 -2 -945 177 -945 -945 156 -55 103 -102 -102 45 -945 -945 -2 177 -55 -945 156 -945 -945 -945 -945 225 -945 98 -2 -55 203 -945 -945 -55 -945 -102 -2 145 103 -945 98 -945 -945 -945 -102 203 -55 -2 56 -55 203 -945 -102 -945 -945 -945 -945 225 -945 -945 130 45 -945 -945 156 -55 -55 -102 56 45 -945 -945 56 145 -55 -2 98 -945 145 -945 -102 45 -945 -945 56 145 45 -2 56 -945 45 -945 -102 145 -945 -2 -2 103 45 -945 56 45 -945 -945 -2 177 -55 -945 156 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 42 nsites= 7 E= 9.1e-004 0.000000 0.000000 0.142857 0.857143 0.000000 0.000000 0.857143 0.142857 0.571429 0.000000 0.428571 0.000000 0.142857 0.000000 0.000000 0.857143 0.000000 0.285714 0.571429 0.142857 0.714286 0.000000 0.142857 0.142857 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.142857 0.000000 0.285714 0.571429 0.142857 0.142857 0.428571 0.285714 0.571429 0.000000 0.428571 0.000000 0.142857 0.000000 0.000000 0.857143 0.000000 0.000000 0.714286 0.285714 0.000000 0.000000 1.000000 0.000000 0.142857 0.000000 0.571429 0.285714 0.000000 0.285714 0.000000 0.714286 0.000000 0.000000 0.857143 0.142857 0.428571 0.142857 0.142857 0.285714 0.000000 0.000000 0.285714 0.714286 0.142857 0.000000 0.857143 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.571429 0.285714 0.142857 0.857143 0.000000 0.000000 0.142857 0.000000 0.142857 0.285714 0.571429 0.428571 0.000000 0.571429 0.000000 0.000000 0.000000 0.142857 0.857143 0.142857 0.285714 0.428571 0.142857 0.857143 0.000000 0.142857 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.714286 0.285714 0.000000 0.000000 0.857143 0.142857 0.142857 0.142857 0.428571 0.285714 0.000000 0.000000 0.428571 0.571429 0.142857 0.285714 0.571429 0.000000 0.571429 0.000000 0.142857 0.285714 0.000000 0.000000 0.428571 0.571429 0.285714 0.285714 0.428571 0.000000 0.285714 0.000000 0.142857 0.571429 0.000000 0.285714 0.285714 0.428571 0.285714 0.000000 0.428571 0.285714 0.000000 0.000000 0.285714 0.714286 0.142857 0.000000 0.857143 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGRTSATGKKRTGGKTGWTGTSAKRTSATGGKKSWKVWBDTG MEME-9 regular expression -------------------------------------------------------------------------------- TG[AG]T[GC]ATG[TG][GT][AG]T[GT]G[GT][TC]G[AT][TG]GT[CG]A[TG][GA]T[GC]AT[GT]G[GT][TG][GC][AT][TG][GAC][TA][TCG][GAT][TG]G -------------------------------------------------------------------------------- Time 2659.08 secs. ******************************************************************************** ******************************************************************************** MOTIF TGCACTYCAGCCTGGGCRACAGAGCRAGAC MEME-10 width = 30 sites = 7 llr = 190 E-value = 3.7e-004 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGCACTYCAGCCTGGGCRACAGAGCRAGAC MEME-10 Description -------------------------------------------------------------------------------- Simplified A 1:173::39:::::1::37:73a::37:a: pos.-specific C ::917:67:397::::711a::::71:::7 probability G :a:1:3::17:::a9a:61:17:9:4:9:: matrix T 9::::74:::13a:::3:::1::13131:3 bits 2.3 * * * 2.0 * * * 1.8 * ** * * * * 1.6 ** * ** * * * * Relative 1.4 *** * * * **** * ** *** Entropy 1.1 *** ** ** ******* ****** **** (39.1 bits) 0.9 ***************** ******* **** 0.7 ***************** ******* **** 0.5 ************************* **** 0.2 ****************************** 0.0 ------------------------------ Multilevel TGCACTCCAGCCTGGGCGACAGAGCGAGAC consensus AGTA C T TA A TAT T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCACTYCAGCCTGGGCRACAGAGCRAGAC MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr19:39073782-39074282 + 33 5.96e-17 attgcaccat tgcactccagcctgggcgacagagtaagac tcggaaaaat chr5:172958978-172959478 + 6 4.20e-16 gccac tgcactccagtctgggcgacagagcgagac tccgtctcaa chr17:75368291-75368791 - 71 6.95e-15 . TGCACTCCAGCCTGAGTAACAGAGCAAGAT CCTATCTTTA chrX:68462526-68463026 + 16 2.15e-14 atcacgtcac agcacttcagcctgggcaacaaagtgagat catgtctcaa chr15:58332060-58332560 + 56 4.55e-12 TGGGGCCTGC TGCCAGTAACCCTGGGTGACGAAGCGTGAC TCACCACTCC chr2:55843190-55843690 - 69 1.31e-11 TG TGAAAGCAAGCTTGGGCCCCAGATCTTGAC AGTTTTATAG chr17:59565174-59565674 - 58 1.90e-11 AACTGCCACG TGCGCTTCGCCTTGGGCGGCTGAGCCATAC CTGAGGGCCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCACTYCAGCCTGGGCRACAGAGCRAGAC MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:39073782-39074282 6e-17 32_[+10]_38 chr5:172958978-172959478 4.2e-16 5_[+10]_65 chr17:75368291-75368791 7e-15 70_[-10] chrX:68462526-68463026 2.2e-14 15_[+10]_55 chr15:58332060-58332560 4.5e-12 55_[+10]_15 chr2:55843190-55843690 1.3e-11 68_[-10]_2 chr17:59565174-59565674 1.9e-11 57_[-10]_13 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCACTYCAGCCTGGGCRACAGAGCRAGAC MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGCACTYCAGCCTGGGCRACAGAGCRAGAC width=30 seqs=7 chr19:39073782-39074282 ( 33) TGCACTCCAGCCTGGGCGACAGAGTAAGAC 1 chr5:172958978-172959478 ( 6) TGCACTCCAGTCTGGGCGACAGAGCGAGAC 1 chr17:75368291-75368791 ( 71) TGCACTCCAGCCTGAGTAACAGAGCAAGAT 1 chrX:68462526-68463026 ( 16) AGCACTTCAGCCTGGGCAACAAAGTGAGAT 1 chr15:58332060-58332560 ( 56) TGCCAGTAACCCTGGGTGACGAAGCGTGAC 1 chr2:55843190-55843690 ( 69) TGAAAGCAAGCTTGGGCCCCAGATCTTGAC 1 chr17:59565174-59565674 ( 58) TGCGCTTCGCCTTGGGCGGCTGAGCCATAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCACTYCAGCCTGGGCRACAGAGCRAGAC MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 12.4148 E= 3.7e-004 -55 -945 -945 203 -945 -945 178 -945 -55 156 -945 -945 177 -102 -102 -945 45 130 -945 -945 -945 -945 -2 177 -945 98 -945 103 45 130 -945 -945 203 -945 -102 -945 -945 -2 130 -945 -945 156 -945 -55 -945 130 -945 45 -945 -945 -945 225 -945 -945 178 -945 -55 -945 156 -945 -945 -945 178 -945 -945 130 -945 45 45 -102 98 -945 177 -102 -102 -945 -945 178 -945 -945 177 -945 -102 -55 45 -945 130 -945 225 -945 -945 -945 -945 -945 156 -55 -945 130 -945 45 45 -102 56 -55 177 -945 -945 45 -945 -945 156 -55 225 -945 -945 -945 -945 130 -945 45 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCACTYCAGCCTGGGCRACAGAGCRAGAC MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 7 E= 3.7e-004 0.142857 0.000000 0.000000 0.857143 0.000000 0.000000 1.000000 0.000000 0.142857 0.857143 0.000000 0.000000 0.714286 0.142857 0.142857 0.000000 0.285714 0.714286 0.000000 0.000000 0.000000 0.000000 0.285714 0.714286 0.000000 0.571429 0.000000 0.428571 0.285714 0.714286 0.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 0.285714 0.714286 0.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.714286 0.000000 0.285714 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.142857 0.000000 0.857143 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.714286 0.000000 0.285714 0.285714 0.142857 0.571429 0.000000 0.714286 0.142857 0.142857 0.000000 0.000000 1.000000 0.000000 0.000000 0.714286 0.000000 0.142857 0.142857 0.285714 0.000000 0.714286 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.857143 0.142857 0.000000 0.714286 0.000000 0.285714 0.285714 0.142857 0.428571 0.142857 0.714286 0.000000 0.000000 0.285714 0.000000 0.000000 0.857143 0.142857 1.000000 0.000000 0.000000 0.000000 0.000000 0.714286 0.000000 0.285714 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGCACTYCAGCCTGGGCRACAGAGCRAGAC MEME-10 regular expression -------------------------------------------------------------------------------- TGCA[CA][TG][CT][CA]A[GC]C[CT]TGGG[CT][GA]ACA[GA]AG[CT][GA][AT]GA[CT] -------------------------------------------------------------------------------- Time 2929.50 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:37479265-37479765 7.87e-01 100 chr19:40090540-40091040 7.75e-01 100 chr5:158451535-158452035 4.61e-04 22_[-3(1.37e-05)]_30_[+3(1.27e-07)]_\ 26 chr3:194134798-194135298 1.03e-13 6_[+4(3.97e-07)]_4_[+1(4.69e-17)]_\ 20 chr6:110958546-110959046 8.13e-02 59_[-4(1.23e-07)]_19 chr7:105012476-105012976 5.75e-02 36_[+4(3.01e-06)]_42 chr19:35612441-35612941 8.89e-03 61_[+3(3.39e-06)]_13_[-3(4.58e-05)]_\ 4 chr6:35259367-35259867 2.58e-01 34_[-4(1.81e-05)]_44 chr15:67254500-67255000 2.28e-03 2_[-4(5.44e-07)]_30_[+4(1.30e-05)]_\ 24 chr3:194672229-194672729 5.18e-01 100 chr22:37905016-37905516 8.40e-02 50_[-3(1.51e-06)]_39 chr7:25856812-25857312 1.38e-11 2_[+1(7.97e-20)]_50 chr1:9943161-9943661 5.60e-01 100 chr18:11688946-11689446 1.68e-01 100 chr12:49130979-49131479 2.66e-01 58_[+4(3.76e-05)]_20 chr19:33373053-33373553 4.97e-01 100 chr12:4538379-4538879 5.81e-02 32_[+6(1.01e-05)]_[+2(8.83e-06)]_15 chr1:193121711-193122211 9.38e-01 100 chr2:55843190-55843690 1.74e-07 68_[-10(1.31e-11)]_2 chr1:204516440-204516940 1.66e-02 12_[-4(4.15e-05)]_54_[+3(8.02e-05)]_\ 1 chr16:31073024-31073524 1.65e-01 100 chrX:53422195-53422695 8.89e-01 100 chr5:40835051-40835551 7.12e-01 100 chr5:73216081-73216581 8.66e-01 100 chr6:90368960-90369460 4.15e-01 100 chr17:35587108-35587608 1.03e-02 17_[-9(7.83e-05)]_41 chr6:159726837-159727337 2.30e-01 6_[+4(1.62e-05)]_38_[+4(1.30e-05)]_\ 12 chr1:234978634-234979134 2.34e-01 100 chr1:224623821-224624321 9.64e-03 65_[+2(5.77e-06)]_13 chr10:21525497-21525997 3.02e-02 43_[+9(1.31e-06)]_15 chr1:28648532-28649032 2.35e-07 8_[+6(1.45e-07)]_37_[+2(7.65e-10)]_\ 2 chr1:36386434-36386934 6.31e-01 100 chr13:30617562-30618062 5.53e-01 64_[+4(3.40e-05)]_14 chr17:16380787-16381287 6.19e-01 100 chr13:44917751-44918251 7.57e-01 100 chr1:150876772-150877272 1.18e-12 19_[+8(1.06e-22)]_39 chr6:32583779-32584279 5.90e-24 15_[+2(3.20e-08)]_[+1(1.32e-25)]_15 chr5:74766966-74767466 6.50e-01 100 chr16:20741554-20742054 6.92e-01 100 chr19:7522192-7522692 3.58e-01 100 chr3:155854348-155854848 8.73e-01 100 chr6:151452128-151452628 1.95e-01 100 chr19:58326947-58327447 4.62e-01 100 chr1:15526571-15527071 7.86e-03 69_[+4(1.79e-08)]_9 chr21:29075694-29076194 2.67e-01 100 chr5:6419305-6419805 2.81e-01 100 chr1:11178277-11178777 1.01e-03 34_[-6(3.62e-08)]_35 chr2:218568535-218569035 5.85e-04 29_[-1(3.53e-05)]_23 chr6:30907548-30908048 2.10e-12 18_[-8(2.50e-21)]_40 chr12:109052312-10905281 8.42e-08 36_[-8(1.15e-16)]_22 chr4:102827326-102827826 1.07e-01 40_[+4(4.43e-06)]_38 chr12:45415262-45415762 7.54e-01 100 chr1:109984431-109984931 1.12e-03 41_[+3(7.49e-06)]_10_[+4(2.63e-06)]_\ 16 chr17:39980594-39981094 4.15e-01 100 chr21:42923979-42924479 4.50e-01 19_[-4(7.35e-05)]_59 chr4:77156770-77157270 3.71e-02 21_[+7(4.70e-05)]_36 chr12:2004296-2004796 5.53e-02 64_[+4(1.52e-06)]_14 chr19:33293254-33293754 4.76e-04 47_[-6(3.85e-09)]_22 chr1:27490248-27490748 6.47e-01 100 chr1:235328467-235328967 5.87e-01 100 chr12:124939628-12494012 8.44e-01 100 chr1:223846023-223846523 2.23e-01 44_[+4(6.42e-06)]_34 chrX:72276895-72277395 5.21e-02 40_[-4(7.25e-06)]_38 chr12:120446233-12044673 5.90e-02 100 chr1:120176323-120176823 5.06e-01 100 chr13:52194231-52194731 3.25e-01 11_[+4(6.70e-05)]_67 chr12:123232762-12323326 1.75e-01 100 chr5:149345498-149345998 3.11e-01 100 chr16:12120436-12120936 5.96e-06 25_[+2(3.20e-08)]_53 chr1:86774471-86774971 8.54e-02 76_[-2(2.80e-06)]_2 chr3:23917017-23917517 5.86e-01 100 chr17:47649669-47650169 8.12e-04 24_[+4(5.91e-08)]_23_[+4(7.35e-05)]_\ 9 chr19:34134448-34134948 1.19e-01 100 chr8:125429968-125430468 8.28e-01 100 chr5:140718675-140719175 7.48e-01 100 chr16:89994815-89995315 8.90e-01 100 chr12:25333707-25334207 5.74e-01 100 chr16:1826968-1827468 7.22e-01 100 chr1:218285006-218285506 9.92e-02 18_[-8(4.98e-05)]_40 chr21:32278643-32279143 4.69e-01 14_[-8(9.14e-05)]_44 chr19:35154707-35155207 9.47e-03 18_[+4(8.05e-05)]_10_[+4(1.03e-05)]_\ 28 chr19:17075084-17075584 3.60e-02 38_[+4(7.25e-06)]_40 chr19:17334630-17335130 6.30e-01 100 chr10:112446811-11244731 7.26e-01 100 chr5:59303238-59303738 4.63e-01 100 chr15:74099982-74100482 1.05e-01 100 chr1:226186676-226187176 1.91e-01 24_[+4(1.62e-05)]_54 chr6:116100773-116101273 9.18e-01 100 chr6:44247008-44247508 1.57e-05 43_[+2(1.91e-09)]_35 chr1:16545750-16546250 3.75e-01 100 chr17:50169215-50169715 1.36e-08 1_[+1(1.02e-14)]_51 chr19:38544168-38544668 1.58e-01 100 chr11:57741124-57741624 1.01e-01 44_[+4(3.90e-06)]_34 chr10:97292271-97292771 1.03e-01 100 chr19:46600767-46601267 6.88e-01 100 chr6:27388762-27389262 3.63e-01 100 chr17:7012230-7012730 9.39e-01 100 chr3:14651386-14651886 3.05e-01 10_[-3(5.91e-05)]_79 chr15:65792172-65792672 2.65e-01 40_[-4(3.07e-05)]_38 chr6:43809464-43809964 9.91e-01 100 chr19:34734129-34734629 8.82e-01 100 chr15:72230393-72230893 5.51e-04 2_[-4(1.81e-05)]_19_[-2(8.83e-06)]_\ 35 chr1:54715583-54716083 8.15e-01 100 chr19:3626702-3627202 8.00e-01 100 chr11:114160001-11416050 1.03e-04 51_[+2(1.20e-07)]_5_[-4(1.30e-05)] chr6:85679039-85679539 9.40e-01 100 chr5:37371127-37371627 4.70e-02 [-4(3.40e-05)]_15_[-4(1.32e-06)]_41 chr1:36464172-36464672 6.90e-02 100 chr19:36528346-36528846 9.67e-02 100 chr1:235504599-235505099 5.75e-01 100 chr5:139439145-139439645 3.92e-01 100 chr20:35616591-35617091 5.73e-19 1_[+2(4.42e-07)]_5_[+5(2.64e-23)]_\ 29 chr11:125625780-12562628 5.50e-01 42_[-4(8.81e-05)]_36 chr17:75368291-75368791 4.98e-16 31_[+2(1.86e-10)]_17_\ [-10(6.95e-15)] chr1:44404937-44405437 2.99e-11 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46_[-4(5.04e-05)]_[+2(5.29e-06)]_10 chr10:665534-666034 6.16e-04 5_[+4(1.62e-05)]_37_[-2(7.47e-06)]_\ 14 chr16:21599214-21599714 4.79e-01 27_[-4(3.43e-06)]_51 chr6:63635860-63636360 2.06e-02 7_[+4(9.39e-09)]_71 chr19:41310252-41310752 1.97e-01 78_[+4(1.62e-05)] chr12:56190112-56190612 2.40e-01 100 chrX:104156608-104157108 5.21e-01 68_[+4(5.04e-05)]_10 chr19:43901897-43902397 1.09e-01 100 chr17:7717032-7717532 1.19e-01 26_[-4(1.52e-06)]_52 chr11:78188237-78188737 6.27e-01 100 chr12:122266182-12226668 5.05e-01 100 chr12:120994736-12099523 5.98e-01 100 chr19:39125806-39126306 8.92e-01 100 chr13:111153247-11115374 1.21e-01 4_[-4(1.32e-06)]_74 chr19:33176853-33177353 1.00e-10 24_[+7(1.95e-18)]_33 chr12:109998995-10999949 1.55e-01 7_[-4(7.38e-07)]_71 chr15:65868978-65869478 5.74e-01 100 chrX:120245022-120245522 6.91e-03 69_[+6(6.92e-05)] chr21:46635653-46636153 5.53e-01 100 chr19:2462939-2463439 9.06e-02 33_[+7(9.78e-05)]_24 chr12:14257687-14258187 3.13e-02 100 chr1:227734986-227735486 2.02e-01 36_[-8(3.12e-05)]_22 chr12:82358285-82358785 2.59e-01 100 chr10:120851040-12085154 6.00e-02 12_[-4(4.15e-05)]_66 chr7:91264155-91264655 9.93e-01 100 chr6:99568462-99568962 7.26e-01 100 chr19:36837964-36838464 2.57e-02 16_[+4(8.05e-05)]_12_[+4(1.81e-05)]_\ 28 chr22:41468711-41469211 1.97e-02 15_[+2(1.05e-06)]_63 chr1:12478148-12478648 4.21e-01 100 chr7:149718949-149719449 3.11e-04 52_[+2(4.22e-08)]_26 chr19:43596264-43596764 8.42e-01 100 chr7:100837182-100837682 5.37e-01 100 chr12:52069493-52069993 3.59e-01 21_[+5(3.97e-05)]_36 chr22:37844463-37844963 1.15e-17 18_[-8(8.39e-23)]_9_[+2(9.34e-08)]_\ 9 chr5:116574616-116575116 3.48e-01 100 chr7:102572210-102572710 3.30e-01 100 chr7:158097570-158098070 5.34e-05 5_[+3(2.20e-07)]_84 chr16:31033049-31033549 3.79e-01 100 chr2:231786151-231786651 3.56e-01 100 chr1:161764993-161765493 5.85e-08 5_[+2(4.42e-07)]_11_[-6(2.44e-10)]_\ 31 chr15:89893865-89894365 4.28e-01 27_[-8(4.13e-05)]_31 chr1:154558608-154559108 2.22e-02 28_[+4(2.30e-06)]_50 chr19:5790828-5791328 9.62e-01 100 chr19:40831827-40832327 3.57e-01 100 chr5:10601249-10601749 9.90e-01 100 chr15:70097493-70097993 1.33e-01 30_[+4(2.77e-05)]_48 chr14:22982615-22983115 2.47e-02 100 chr5:139517800-139518300 3.47e-01 63_[-3(1.64e-05)]_26 chr15:68277461-68277961 1.04e-02 14_[-5(8.75e-05)]_15_[+4(8.56e-07)]_\ 6 chr22:20496077-20496577 4.54e-05 2_[+4(3.90e-06)]_49_[+4(1.46e-07)]_\ 5 chr3:16482963-16483463 3.43e-02 4_[+6(2.12e-05)]_65 chr1:232704729-232705229 3.83e-01 10_[+9(6.04e-05)]_48 chr17:19507932-19508432 7.05e-01 100 chr22:41446725-41447225 3.42e-01 70_[+4(1.45e-05)]_8 chr1:40691553-40692053 2.02e-01 15_[+4(3.01e-06)]_63 chr1:179882493-179882993 9.58e-01 100 chr9:85743258-85743758 5.11e-02 41_[-3(3.39e-06)]_48 chr1:161097518-161098018 4.29e-22 11_[-1(1.98e-26)]_41 chr12:2812657-2813157 1.01e-02 46_[-4(1.46e-07)]_32 chr14:90383176-90383676 2.24e-01 100 chr1:80054123-80054623 2.08e-01 100 chr7:157880938-157881438 8.88e-04 42_[+3(1.93e-06)]_4_[+9(7.57e-05)]_\ 1 chr19:4575315-4575815 7.78e-02 57_[+9(1.39e-05)]_1 chr11:46700552-46701052 2.52e-01 100 chr13:112346324-11234682 4.84e-01 100 chr5:139341763-139342263 9.50e-02 100 chr2:241881341-241881841 4.47e-19 51_[-1(2.04e-28)]_1 chr10:101442037-10144253 1.50e-21 34_[-1(1.07e-20)]_18 chrX:130165934-130166434 1.13e-01 100 chr1:163321582-163322082 1.74e-01 100 chr3:185498718-185499218 6.70e-02 4_[-4(1.30e-05)]_74 chr17:1293394-1293894 3.87e-11 3_[+9(4.70e-14)]_3_[+3(1.27e-07)]_\ 11_[+3(1.27e-07)]_19 chr19:17337101-17337601 3.72e-01 100 chr1:212791597-212792097 1.43e-01 24_[+8(1.92e-05)]_34 chr19:10416489-10416989 4.35e-01 78_[+3(1.91e-05)]_11 chr5:175378419-175378919 8.64e-01 100 chr1:109484020-109484520 1.34e-01 13_[+4(1.30e-05)]_65 chr1:21345573-21346073 5.75e-01 57_[+4(9.19e-06)]_21 chr16:25258046-25258546 2.03e-01 100 chr10:68153535-68154035 2.05e-02 100 chr12:123601769-12360226 8.72e-01 5_[+4(4.58e-05)]_73 chr4:105708465-105708965 7.71e-01 100 chr8:123396380-123396880 6.62e-01 100 chr7:99408604-99409104 3.22e-01 100 chr4:4541824-4542324 6.45e-01 100 chr19:34676858-34677358 4.44e-01 100 chrX:24054493-24054993 5.30e-01 100 chr1:43946554-43947054 8.65e-01 100 chr15:67792450-67792950 2.32e-02 11_[+3(3.85e-06)]_78 chr1:175470952-175471452 8.78e-03 16_[+10(3.90e-05)]_54 chr7:139339827-139340327 4.87e-21 18_[+2(4.94e-07)]_5_[+5(2.18e-23)]_\ 12 chr13:113296750-11329725 9.78e-02 10_[+4(4.65e-07)]_68 chr17:18087645-18088145 4.47e-01 100 chr21:32612473-32612973 3.32e-01 100 chr12:130584380-13058488 1.74e-09 10_[-3(2.55e-06)]_19_[-9(1.98e-09)]_\ 2_[-3(6.64e-07)]_5 chr12:31749237-31749737 3.97e-02 57_[-3(3.92e-05)]_6_[-2(9.31e-05)]_\ 4 chr17:76353775-76354275 3.60e-02 100 chr1:205211463-205211963 3.28e-01 100 chr11:1418124-1418624 3.80e-02 25_[+2(8.75e-05)]_53 chr17:59209710-59210210 8.43e-04 4_[-4(8.56e-07)]_7_[-2(1.22e-05)]_\ 45 chr10:94673530-94674030 9.40e-03 5_[-3(5.71e-07)]_25_[-3(2.55e-06)]_\ 4_[-3(1.27e-06)]_33 chr20:63339296-63339796 5.92e-06 14_[-3(1.91e-05)]_17_[-3(6.60e-06)]_\ 16_[+6(2.48e-09)] chr19:39390715-39391215 9.98e-01 100 chr17:40140229-40140729 7.97e-01 100 chrX:41084724-41085224 6.44e-02 29_[+4(3.90e-06)]_16_[+4(5.04e-05)]_\ 11 chr19:40715525-40716025 1.20e-02 47_[-9(5.73e-05)]_11 chr8:37302587-37303087 2.33e-01 100 chr12:110048406-11004890 9.38e-01 100 chr2:27663605-27664105 3.85e-01 28_[-4(9.63e-05)]_50 chr1:233112861-233113361 5.67e-02 58_[-3(6.60e-06)]_31 chr7:100673373-100673873 6.60e-01 100 chr20:63339942-63340442 6.55e-05 6_[-3(6.60e-06)]_17_[-3(6.60e-06)]_\ 17_[-3(6.60e-06)]_16_[+3(2.01e-05)] chr19:44259431-44259931 2.66e-20 30_[+2(9.34e-08)]_5_[+5(7.45e-24)] chr1:226711159-226711659 1.42e-11 51_[-1(1.97e-12)]_1 chr1:201435645-201436145 1.32e-13 49_[-1(9.60e-22)]_3 chr1:16644479-16644979 7.51e-01 100 chr12:130765131-13076563 5.53e-10 6_[+9(8.60e-14)]_32_[+3(2.20e-07)]_\ 9 chr19:58519607-58520107 8.64e-01 100 chr17:68019698-68020198 1.81e-11 8_[-7(1.03e-17)]_49 chr19:55216326-55216826 8.09e-01 100 chr9:132944480-132944980 8.01e-01 100 chr15:71279054-71279554 1.14e-01 2_[+3(5.67e-05)]_87 chr19:1652597-1653097 6.51e-02 2_[-4(6.10e-05)]_76 chr4:77075915-77076415 2.20e-02 56_[+9(2.85e-05)]_2 chr13:40770935-40771435 2.59e-02 59_[+4(4.65e-07)]_19 chr19:4723788-4724288 1.61e-01 100 chr13:113208520-11320902 1.78e-01 100 chr1:81126904-81127404 4.58e-02 100 chr1:156661291-156661791 1.30e-13 52_[-1(1.09e-21)] chr12:132828726-13282922 7.66e-01 100 chr17:45147626-45148126 7.39e-01 100 chr16:30957527-30958027 8.62e-01 100 chr12:55829108-55829608 1.18e-12 [+8(9.94e-22)]_58 chr20:38435096-38435596 7.14e-01 100 chr10:75379153-75379653 6.57e-02 34_[+3(1.47e-05)]_55 chr19:36572927-36573427 7.88e-01 100 chr8:144456792-144457292 4.54e-03 30_[-3(2.01e-05)]_3_[+9(3.80e-05)]_\ 14 chr12:109477298-10947779 4.81e-02 30_[-4(8.81e-05)]_48 chr17:50397313-50397813 1.63e-01 6_[+4(2.49e-05)]_72 chr16:15590883-15591383 2.04e-02 14_[-2(5.26e-05)]_1_[+2(1.95e-05)]_\ 41 chr18:70205532-70206032 3.82e-01 100 chr9:133417915-133418415 5.32e-01 100 chr9:97922041-97922541 4.45e-01 100 chr17:45148373-45148873 5.42e-03 2_[-4(4.58e-05)]_32_[+2(8.83e-06)]_\ 22 chr1:231528230-231528730 7.05e-01 100 chr17:996817-997317 5.64e-01 100 chr17:18625536-18626036 2.58e-01 100 chr10:72354591-72355091 7.09e-01 100 chr21:25607267-25607767 1.12e-01 37_[+4(1.52e-06)]_41 chr6:82260154-82260654 1.94e-01 100 chr3:9731361-9731861 8.11e-02 7_[-3(5.91e-05)]_82 chr1:44213170-44213670 8.55e-01 100 chr8:22604328-22604828 9.69e-01 100 chr10:72320656-72321156 1.05e-04 78_[-4(2.30e-06)] chr1:205122013-205122513 4.62e-01 100 chr12:54359114-54359614 1.77e-05 42_[-2(6.16e-07)]_36 chr19:39411965-39412465 1.82e-06 12_[-7(9.06e-14)]_45 chr10:101830476-10183097 1.90e-11 2_[+1(3.41e-19)]_50 chr19:36604761-36605261 9.83e-07 8_[+1(5.44e-12)]_44 chr5:5340245-5340745 9.12e-02 78_[+2(9.31e-05)] chr13:110870206-11087070 2.39e-02 80_[-3(8.40e-07)]_9 chr9:133030706-133031206 9.81e-01 100 chr1:37989827-37990327 9.73e-01 100 chr6:157323265-157323765 7.61e-02 78_[-4(2.01e-06)] chr17:59619503-59620003 1.83e-01 20_[+4(2.77e-05)]_58 chr16:30698034-30698534 7.50e-01 3_[-4(5.04e-05)]_75 chr19:1021377-1021877 2.78e-02 72_[+4(4.15e-05)]_6 chr21:43728512-43729012 2.24e-01 71_[-4(1.16e-05)]_7 chr19:40920978-40921478 2.14e-01 18_[+2(9.31e-05)]_60 chrX:41333338-41333838 8.14e-01 100 chr17:59565174-59565674 2.32e-05 20_[-4(3.90e-06)]_15_\ [-10(1.90e-11)]_13 chr22:39529090-39529590 7.04e-01 100 chr10:93702443-93702943 1.60e-01 55_[-4(7.35e-05)]_23 chr19:37655821-37656321 4.85e-01 100 chr1:16122847-16123347 5.88e-01 100 chr17:3890068-3890568 6.78e-01 100 chr1:26620515-26621015 3.87e-01 100 chr14:99821631-99822131 1.46e-02 9_[+2(1.13e-05)]_69 chr1:1375033-1375533 5.89e-01 30_[+4(8.81e-05)]_48 chr11:47578718-47579218 5.99e-02 50_[+4(3.01e-06)]_28 chr17:7836707-7837207 1.13e-02 1_[+4(8.56e-07)]_35_[+4(1.62e-05)]_\ 20 chr6:131628023-131628523 6.49e-01 100 chrX:53225106-53225606 8.82e-01 100 chr20:45972080-45972580 5.48e-01 100 chr15:64387518-64388018 3.41e-02 1_[-4(6.70e-05)]_77 chr1:206612177-206612677 6.37e-01 100 chr15:72375777-72376277 9.50e-01 100 chr1:32817124-32817624 4.48e-01 100 chr1:27321870-27322370 4.53e-01 100 chr1:25998125-25998625 9.82e-01 100 chr17:57849937-57850437 9.59e-01 100 chr6:169396001-169396501 5.74e-04 22_[-3(5.43e-06)]_7_[-2(1.55e-05)]_\ 2_[-3(5.43e-06)]_25 chr17:42388535-42389035 5.85e-02 42_[-4(3.76e-05)]_36 chr17:42998055-42998555 5.35e-01 100 chr8:16825889-16826389 3.83e-05 [-2(6.16e-07)]_31_[-3(6.05e-05)]_36 chr12:49060566-49061066 7.10e-01 100 chr19:36916421-36916921 1.02e-09 9_[-1(4.62e-13)]_1_[+9(9.12e-05)] chr17:74514179-74514679 2.85e-16 8_[+3(5.71e-07)]_23_[+9(2.49e-22)]_\ 16 chr15:74546104-74546604 7.72e-01 100 chr21:29217746-29218246 4.30e-01 100 chr17:63842557-63843057 2.01e-01 100 chr20:37095880-37096380 2.80e-01 100 chr1:46132563-46133063 9.88e-02 65_[+4(2.49e-05)]_13 chr3:53347398-53347898 7.45e-01 100 chr5:176388752-176389252 6.93e-04 67_[-4(3.01e-06)]_11 chr6:143450499-143450999 9.80e-01 100 chr1:229221379-229221879 1.09e-01 100 chr12:56041758-56042258 6.43e-01 100 chr17:51153324-51153824 9.75e-01 100 chr1:93078910-93079410 4.73e-01 100 chr12:57111961-57112461 1.13e-13 49_[+1(8.06e-19)]_3 chr1:31387528-31388028 1.71e-09 16_[+1(2.67e-12)]_36 chrUn_KI270467v1:2847-33 1.87e-08 7_[+6(9.83e-10)]_11_[+6(5.77e-13)]_\ 20 chr5:57042473-57042973 1.44e-02 100 chr20:58650922-58651422 1.83e-01 74_[-4(5.68e-06)]_4 chr19:35947307-35947807 8.92e-01 100 chr12:12266942-12267442 3.06e-03 2_[+1(1.43e-05)]_50 chr12:124914567-12491506 9.75e-06 39_[+7(8.40e-13)]_18 chr8:630768-631268 4.93e-01 3_[-9(8.53e-05)]_55 chr1:183471813-183472313 3.35e-02 22_[-4(4.58e-05)]_56 chrX:73943971-73944471 9.89e-01 100 chr19:37594301-37594801 4.37e-01 100 chr1:63523090-63523590 1.97e-02 15_[-4(1.81e-05)]_63 chr1:3992024-3992524 9.29e-07 19_[+3(1.27e-07)]_6_[+3(5.71e-07)]_\ 5_[+3(5.71e-07)]_5_[+3(5.71e-07)]_5_[+3(5.71e-07)]_5 chr15:65610918-65611418 9.10e-01 100 chr21:32771793-32772293 6.92e-02 100 chr8:144456585-144457085 8.42e-02 26_[-3(5.71e-07)]_5_[-3(4.95e-06)]_\ 36_[-3(1.08e-05)] chr16:1271739-1272239 2.40e-02 15_[-1(1.01e-05)]_37 chr1:234723925-234724425 7.57e-11 9_[-4(8.57e-08)]_11_[-2(8.49e-07)]_\ 25_[+3(1.27e-07)] chr5:1950694-1951194 4.53e-03 12_[-1(1.17e-05)]_40 chr17:74513974-74514474 4.50e-13 13_[+9(4.96e-20)]_32_[+3(5.71e-07)]_\ 2 chr21:39313523-39314023 1.87e-01 68_[-4(2.49e-05)]_10 chr13:110965226-11096572 1.04e-01 100 chr17:77233788-77234288 5.42e-04 11_[+3(1.37e-05)]_29_[+3(1.37e-05)]_\ 38 chr19:1383507-1384007 8.70e-01 100 chrUn_KI270467v1:2001-25 3.50e-08 20_[+6(7.92e-15)]_11_[+2(1.22e-05)]_\ 16 chr1:236097024-236097524 8.96e-01 100 chr10:93209008-93209508 7.26e-02 [-3(5.43e-06)]_89 chr1:155244581-155245081 2.71e-07 [-4(9.92e-07)]_14_[-4(3.90e-06)]_10_\ [-2(1.54e-07)]_10 chr17:78558312-78558812 1.84e-05 [-3(5.71e-07)]_11_[-3(1.27e-07)]_11_\ [-3(2.20e-07)]_17_[-3(1.77e-05)]_17 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: surya ********************************************************************************