******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF24.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr17:45383887-45384387 1.0000 100 chr1:80054110-80054610 1.0000 100 chr20:53609814-53610314 1.0000 100 chr14:68140177-68140677 1.0000 100 chr1:234534114-234534614 1.0000 100 chr6:125050658-125051158 1.0000 100 chr10:12720368-12720868 1.0000 100 chr1:65254894-65255394 1.0000 100 chr10:132942674-13294317 1.0000 100 chr10:1498786-1499286 1.0000 100 chr6:26285328-26285828 1.0000 100 chr19:39033068-39033568 1.0000 100 chr19:8367520-8368020 1.0000 100 chr10:17059123-17059623 1.0000 100 chr21:43718655-43719155 1.0000 100 chr6:157323215-157323715 1.0000 100 chr5:5340229-5340729 1.0000 100 chr19:36916278-36916778 1.0000 100 chr5:56123678-56124178 1.0000 100 chr12:114914223-11491472 1.0000 100 chr7:98686547-98687047 1.0000 100 chr3:100002796-100003296 1.0000 100 chr7:80833766-80834266 1.0000 100 chr1:148522518-148523018 1.0000 100 chr6:30769478-30769978 1.0000 100 chr6:27633136-27633636 1.0000 100 chr12:52926707-52927207 1.0000 100 chr8:30722793-30723293 1.0000 100 chr16:50806532-50807032 1.0000 100 chr1:228647620-228648120 1.0000 100 chr17:7242766-7243266 1.0000 100 chr5:140327468-140327968 1.0000 100 chr1:232793902-232794402 1.0000 100 chr1:224873198-224873698 1.0000 100 chr17:17742212-17742712 1.0000 100 chr17:51121713-51122213 1.0000 100 chr15:69143727-69144227 1.0000 100 chr6:27495560-27496060 1.0000 100 chr9:87140774-87141274 1.0000 100 chr16:25257932-25258432 1.0000 100 chr4:40333909-40334409 1.0000 100 chr9:124862029-124862529 1.0000 100 chr16:49084602-49085102 1.0000 100 chr19:1445424-1445924 1.0000 100 chr6:20542981-20543481 1.0000 100 chr19:2032438-2032938 1.0000 100 chr2:47176350-47176850 1.0000 100 chr6:143755246-143755746 1.0000 100 chr10:121310107-12131060 1.0000 100 chr19:35947298-35947798 1.0000 100 chr6:16947452-16947952 1.0000 100 chr17:7836747-7837247 1.0000 100 chr20:3795657-3796157 1.0000 100 chr9:37415230-37415730 1.0000 100 chr12:806436-806936 1.0000 100 chr4:80307274-80307774 1.0000 100 chr6:30646476-30646976 1.0000 100 chr13:87123939-87124439 1.0000 100 chr5:111091983-111092483 1.0000 100 chr12:25333770-25334270 1.0000 100 chr1:42179917-42180417 1.0000 100 chr5:124661270-124661770 1.0000 100 chr17:1114993-1115493 1.0000 100 chr10:72320664-72321164 1.0000 100 chr19:38683668-38684168 1.0000 100 chr17:45783296-45783796 1.0000 100 chr19:33521520-33522020 1.0000 100 chr19:34218181-34218681 1.0000 100 chr20:50165933-50166433 1.0000 100 chr18:59455119-59455619 1.0000 100 chr1:164611723-164612223 1.0000 100 chr18:49655959-49656459 1.0000 100 chr1:107767194-107767694 1.0000 100 chr1:156661283-156661783 1.0000 100 chr19:48954495-48954995 1.0000 100 chr12:57752224-57752724 1.0000 100 chr6:100592859-100593359 1.0000 100 chr6:125511886-125512386 1.0000 100 chr15:66883335-66883835 1.0000 100 chrX:120603664-120604164 1.0000 100 chr5:92552268-92552768 1.0000 100 chr1:47690347-47690847 1.0000 100 chr9:130780866-130781366 1.0000 100 chr17:30906033-30906533 1.0000 100 chr5:99900359-99900859 1.0000 100 chrX:73944015-73944515 1.0000 100 chr12:113966041-11396654 1.0000 100 chr1:201721095-201721595 1.0000 100 chr1:201554899-201555399 1.0000 100 chr11:9759718-9760218 1.0000 100 chr5:136729903-136730403 1.0000 100 chr1:200890670-200891170 1.0000 100 chr10:60951230-60951730 1.0000 100 chr1:234745749-234746249 1.0000 100 chr10:104329249-10432974 1.0000 100 chr19:45424003-45424503 1.0000 100 chr19:36837962-36838462 1.0000 100 chr19:13758313-13758813 1.0000 100 chr6:168147185-168147685 1.0000 100 chr19:40715622-40716122 1.0000 100 chr6:167839254-167839754 1.0000 100 chr17:43483580-43484080 1.0000 100 chrX:153333629-153334129 1.0000 100 chr1:31170698-31171198 1.0000 100 chr7:102572209-102572709 1.0000 100 chr13:37046903-37047403 1.0000 100 chr1:235917364-235917864 1.0000 100 chr14:74140273-74140773 1.0000 100 chr20:37095835-37096335 1.0000 100 chr19:39073634-39074134 1.0000 100 chr5:76790523-76791023 1.0000 100 chr6:108295594-108296094 1.0000 100 chr1:227897683-227898183 1.0000 100 chr5:17305907-17306407 1.0000 100 chr6:2028631-2029131 1.0000 100 chr19:37594307-37594807 1.0000 100 chr3:14439468-14439968 1.0000 100 chr16:3152659-3153159 1.0000 100 chr1:208046403-208046903 1.0000 100 chr16:31700186-31700686 1.0000 100 chr3:42819883-42820383 1.0000 100 chrX:136496486-136496986 1.0000 100 chr1:151494691-151495191 1.0000 100 chr16:30065144-30065644 1.0000 100 chr5:90547951-90548451 1.0000 100 chr19:40090495-40090995 1.0000 100 chr6:28212787-28213287 1.0000 100 chr15:89334867-89335367 1.0000 100 chr6:116680675-116681175 1.0000 100 chr19:50896546-50897046 1.0000 100 chr17:75368267-75368767 1.0000 100 chr17:44014753-44015253 1.0000 100 chr19:33293218-33293718 1.0000 100 chr22:41446656-41447156 1.0000 100 chr13:110870156-11087065 1.0000 100 chr17:68019649-68020149 1.0000 100 chr1:44213194-44213694 1.0000 100 chr19:29845566-29846066 1.0000 100 chr17:58391411-58391911 1.0000 100 chr1:25998125-25998625 1.0000 100 chr19:33304587-33305087 1.0000 100 chr6:56529579-56530079 1.0000 100 chr1:3403744-3404244 1.0000 100 chr1:116472468-116472968 1.0000 100 chr15:74099994-74100494 1.0000 100 chr3:14651379-14651879 1.0000 100 chr17:79914967-79915467 1.0000 100 chr1:81032850-81033350 1.0000 100 chr9:135329950-135330450 1.0000 100 chr19:47515201-47515701 1.0000 100 chr3:9731327-9731827 1.0000 100 chr19:43596200-43596700 1.0000 100 chr12:121888256-12188875 1.0000 100 chr22:27115760-27116260 1.0000 100 chr12:57111957-57112457 1.0000 100 chr5:181222118-181222618 1.0000 100 chr3:4986820-4987320 1.0000 100 chr12:125064920-12506542 1.0000 100 chr6:151452039-151452539 1.0000 100 chr1:1375059-1375559 1.0000 100 chr12:89769154-89769654 1.0000 100 chr5:168794226-168794726 1.0000 100 chr15:40857664-40858164 1.0000 100 chr9:136980634-136981134 1.0000 100 chr19:38929972-38930472 1.0000 100 chr1:206612179-206612679 1.0000 100 chr1:232704677-232705177 1.0000 100 chr1:67686531-67687031 1.0000 100 chr9:1458404-1458904 1.0000 100 chr1:151070350-151070850 1.0000 100 chr7:656950-657450 1.0000 100 chr6:16681338-16681838 1.0000 100 chr1:155241046-155241546 1.0000 100 chr5:123814005-123814505 1.0000 100 chr12:114662474-11466297 1.0000 100 chr6:131628024-131628524 1.0000 100 chr7:80883577-80884077 1.0000 100 chr6:26103667-26104167 1.0000 100 chr7:36128896-36129396 1.0000 100 chr19:1313587-1314087 1.0000 100 chr22:27212627-27213127 1.0000 100 chr19:10087593-10088093 1.0000 100 chr12:12398170-12398670 1.0000 100 chr1:236524367-236524867 1.0000 100 chr9:82923377-82923877 1.0000 100 chr12:65631475-65631975 1.0000 100 chr5:136123152-136123652 1.0000 100 chr1:17011059-17011559 1.0000 100 chr1:234544510-234545010 1.0000 100 chr8:16825914-16826414 1.0000 100 chr3:194350280-194350780 1.0000 100 chr12:124940110-12494061 1.0000 100 chr21:34844330-34844830 1.0000 100 chr19:38224022-38224522 1.0000 100 chr5:116574677-116575177 1.0000 100 chr1:234975046-234975546 1.0000 100 chrX:123803387-123803887 1.0000 100 chr6:47134647-47135147 1.0000 100 chr5:174520376-174520876 1.0000 100 chr5:38783037-38783537 1.0000 100 chr6:134109442-134109942 1.0000 100 chr17:68381032-68381532 1.0000 100 chr6:27592549-27593049 1.0000 100 chr7:5781581-5782081 1.0000 100 chr8:123396327-123396827 1.0000 100 chr6:84227531-84228031 1.0000 100 chr11:1201699-1202199 1.0000 100 chr10:665551-666051 1.0000 100 chr5:124908854-124909354 1.0000 100 chr20:50284442-50284942 1.0000 100 chr5:174514924-174515424 1.0000 100 chr10:77287732-77288232 1.0000 100 chr3:181328972-181329472 1.0000 100 chr19:39411962-39412462 1.0000 100 chr3:45509072-45509572 1.0000 100 chr12:52871233-52871733 1.0000 100 chr7:70092349-70092849 1.0000 100 chr22:38701195-38701695 1.0000 100 chr7:2314881-2315381 1.0000 100 chr7:132255831-132256331 1.0000 100 chr10:72228250-72228750 1.0000 100 chr12:120584228-12058472 1.0000 100 chr12:107092157-10709265 1.0000 100 chr19:34184884-34185384 1.0000 100 chr10:35195680-35196180 1.0000 100 chr17:45148371-45148871 1.0000 100 chr1:37989837-37990337 1.0000 100 chr14:81221085-81221585 1.0000 100 chr5:174371424-174371924 1.0000 100 chr17:29149022-29149522 1.0000 100 chr12:89526225-89526725 1.0000 100 chr7:98476708-98477208 1.0000 100 chr17:76264885-76265385 1.0000 100 chr13:94549508-94550008 1.0000 100 chr1:86774466-86774966 1.0000 100 chr7:13920084-13920584 1.0000 100 chr16:3019908-3020408 1.0000 100 chr15:36951752-36952252 1.0000 100 chr1:228861082-228861582 1.0000 100 chr7:102991587-102992087 1.0000 100 chr16:30698037-30698537 1.0000 100 chr19:46530077-46530577 1.0000 100 chr5:95644278-95644778 1.0000 100 chr7:116810321-116810821 1.0000 100 chr6:134111066-134111566 1.0000 100 chr1:228902931-228903431 1.0000 100 chr1:198763225-198763725 1.0000 100 chr16:88247420-88247920 1.0000 100 chr5:69521063-69521563 1.0000 100 chr10:44752824-44753324 1.0000 100 chr2:136248217-136248717 1.0000 100 chr15:65832566-65833066 1.0000 100 chr12:50247047-50247547 1.0000 100 chr16:29273505-29274005 1.0000 100 chr20:63339255-63339755 1.0000 100 chr11:47578707-47579207 1.0000 100 chr1:3992055-3992555 1.0000 100 chr3:138833408-138833908 1.0000 100 chr15:58038612-58039112 1.0000 100 chr20:20603272-20603772 1.0000 100 chr19:4723787-4724287 1.0000 100 chr8:125091570-125092070 1.0000 100 chr1:205122024-205122524 1.0000 100 chr1:18182481-18182981 1.0000 100 chr19:30069387-30069887 1.0000 100 chr16:57486550-57487050 1.0000 100 chr13:40770926-40771426 1.0000 100 chr10:129440201-12944070 1.0000 100 chr19:32373693-32374193 1.0000 100 chr1:68384332-68384832 1.0000 100 chr6:143450498-143450998 1.0000 100 chr13:112213448-11221394 1.0000 100 chr15:64387542-64388042 1.0000 100 chr9:98280620-98281120 1.0000 100 chr1:28648535-28649035 1.0000 100 chr12:50505433-50505933 1.0000 100 chr7:80876836-80877336 1.0000 100 chr9:136581066-136581566 1.0000 100 chr20:45891051-45891551 1.0000 100 chr12:109996295-10999679 1.0000 100 chr12:49060574-49061074 1.0000 100 chr16:12120423-12120923 1.0000 100 chr19:18700771-18701271 1.0000 100 chr5:94469815-94470315 1.0000 100 chr1:26470552-26471052 1.0000 100 chr10:129605990-12960649 1.0000 100 chr19:29810997-29811497 1.0000 100 chr1:12478104-12478604 1.0000 100 chr8:25998481-25998981 1.0000 100 chr19:42032392-42032892 1.0000 100 chr3:14603191-14603691 1.0000 100 chr20:46021234-46021734 1.0000 100 chr7:133492150-133492650 1.0000 100 chr12:6937858-6938358 1.0000 100 chr19:35774200-35774700 1.0000 100 chr1:159916162-159916662 1.0000 100 chr7:66075178-66075678 1.0000 100 chr20:25237777-25238277 1.0000 100 chr10:93702421-93702921 1.0000 100 chr8:118109177-118109677 1.0000 100 chr15:70100891-70101391 1.0000 100 chr8:60714600-60715100 1.0000 100 chr2:55843216-55843716 1.0000 100 chr12:55715781-55716281 1.0000 100 chr10:63707201-63707701 1.0000 100 chr19:35643440-35643940 1.0000 100 chr6:35044916-35045416 1.0000 100 chr16:31032993-31033493 1.0000 100 chr15:74196073-74196573 1.0000 100 chr12:54359113-54359613 1.0000 100 chr21:33968194-33968694 1.0000 100 chr11:117907617-11790811 1.0000 100 chr1:26620520-26621020 1.0000 100 chr13:42720345-42720845 1.0000 100 chr6:6004559-6005059 1.0000 100 chr13:112346322-11234682 1.0000 100 chr9:136150600-136151100 1.0000 100 chr16:4944716-4945216 1.0000 100 chr20:58650924-58651424 1.0000 100 chr16:25049562-25050062 1.0000 100 chr19:34364609-34365109 1.0000 100 chr20:53899449-53899949 1.0000 100 chr12:56041716-56042216 1.0000 100 chr1:163321645-163322145 1.0000 100 chr17:34981757-34982257 1.0000 100 chr17:71438643-71439143 1.0000 100 chr19:40750241-40750741 1.0000 100 chr22:40711436-40711936 1.0000 100 chrUn_KI270466v1:178-678 1.0000 100 chr15:58332058-58332558 1.0000 100 chr12:116278171-11627867 1.0000 100 chr1:61141529-61142029 1.0000 100 chr1:220118992-220119492 1.0000 100 chr1:175470939-175471439 1.0000 100 chr5:6419311-6419811 1.0000 100 chr17:61335994-61336494 1.0000 100 chr1:234612520-234613020 1.0000 100 chr10:15879600-15880100 1.0000 100 chr17:42998043-42998543 1.0000 100 chr8:25458862-25459362 1.0000 100 chr15:66886240-66886740 1.0000 100 chr3:182212315-182212815 1.0000 100 chr15:71279071-71279571 1.0000 100 chr22:20496077-20496577 1.0000 100 chr1:22271812-22272312 1.0000 100 chr17:42388538-42389038 1.0000 100 chr10:61974503-61975003 1.0000 100 chr6:49550540-49551040 1.0000 100 chr11:128522470-12852297 1.0000 100 chr1:14742236-14742736 1.0000 100 chr19:18682942-18683442 1.0000 100 chr1:145281018-145281518 1.0000 100 chr21:39313494-39313994 1.0000 100 chr1:109901822-109902322 1.0000 100 chr6:20091888-20092388 1.0000 100 chr8:630809-631309 1.0000 100 chr8:47292665-47293165 1.0000 100 chr4:48016744-48017244 1.0000 100 chr3:45618045-45618545 1.0000 100 chr12:124914526-12491502 1.0000 100 chr19:1021420-1021920 1.0000 100 chr8:37479283-37479783 1.0000 100 chr5:124735012-124735512 1.0000 100 chr1:15799220-15799720 1.0000 100 chr19:10701170-10701670 1.0000 100 chr1:229221378-229221878 1.0000 100 chr13:42110329-42110829 1.0000 100 chr8:144456598-144457098 1.0000 100 chr8:37360446-37360946 1.0000 100 chr19:55118233-55118733 1.0000 100 chr4:5037945-5038445 1.0000 100 chr1:6157679-6158179 1.0000 100 chr5:125485136-125485636 1.0000 100 chr21:25608033-25608533 1.0000 100 chr11:65711802-65712302 1.0000 100 chr13:50357574-50358074 1.0000 100 chr17:74514299-74514799 1.0000 100 chr5:14156522-14157022 1.0000 100 chr3:16482908-16483408 1.0000 100 chr1:93078908-93079408 1.0000 100 chr1:232678510-232679010 1.0000 100 chr10:45726933-45727433 1.0000 100 chr15:65610906-65611406 1.0000 100 chr7:93232049-93232549 1.0000 100 chr6:27672106-27672606 1.0000 100 chr17:36825034-36825534 1.0000 100 chr2:231037039-231037539 1.0000 100 chr1:224623788-224624288 1.0000 100 chr3:10191723-10192223 1.0000 100 chr1:228781078-228781578 1.0000 100 chr15:98896850-98897350 1.0000 100 chr20:57266565-57267065 1.0000 100 chr12:13099906-13100406 1.0000 100 chr9:110048192-110048692 1.0000 100 chr20:35284748-35285248 1.0000 100 chr10:68153530-68154030 1.0000 100 chr3:185283243-185283743 1.0000 100 chr14:76486225-76486725 1.0000 100 chr12:54033465-54033965 1.0000 100 chr20:20212561-20213061 1.0000 100 chr10:23408563-23409063 1.0000 100 chr12:2812686-2813186 1.0000 100 chr12:41288069-41288569 1.0000 100 chr1:63523060-63523560 1.0000 100 chr10:50067626-50068126 1.0000 100 chr7:116218162-116218662 1.0000 100 chr2:191321782-191322282 1.0000 100 chr10:101818682-10181918 1.0000 100 chr1:154558640-154559140 1.0000 100 chr19:47417718-47418218 1.0000 100 chr9:85743211-85743711 1.0000 100 chr1:156444383-156444883 1.0000 100 chr6:2998453-2998953 1.0000 100 chr19:10416562-10417062 1.0000 100 chr12:122266234-12226673 1.0000 100 chr15:78317419-78317919 1.0000 100 chr10:22552789-22553289 1.0000 100 chr1:89719660-89720160 1.0000 100 chr5:10601349-10601849 1.0000 100 chr2:70293300-70293800 1.0000 100 chr1:183471828-183472328 1.0000 100 chr6:3230857-3231357 1.0000 100 chr1:85062554-85063054 1.0000 100 chr15:70526415-70526915 1.0000 100 chr1:155226948-155227448 1.0000 100 chr10:94673553-94674053 1.0000 100 chr10:15704476-15704976 1.0000 100 chr15:75335784-75336284 1.0000 100 chr6:169395973-169396473 1.0000 100 chr19:10569098-10569598 1.0000 100 chr2:230864448-230864948 1.0000 100 chr14:99192665-99193165 1.0000 100 chr20:362562-363062 1.0000 100 chr17:51153285-51153785 1.0000 100 chr12:31749180-31749680 1.0000 100 chr16:28974519-28975019 1.0000 100 chr1:233635929-233636429 1.0000 100 chr12:2057094-2057594 1.0000 100 chr8:37392989-37393489 1.0000 100 chr17:7234345-7234845 1.0000 100 chr2:46481539-46482039 1.0000 100 chr12:26274580-26275080 1.0000 100 chr6:10414233-10414733 1.0000 100 chr17:77002219-77002719 1.0000 100 chr14:23352889-23353389 1.0000 100 chr5:57042472-57042972 1.0000 100 chr1:85274908-85275408 1.0000 100 chr5:1950664-1951164 1.0000 100 chr16:31072987-31073487 1.0000 100 chr5:175378418-175378918 1.0000 100 chr14:99821654-99822154 1.0000 100 chr6:2985946-2986446 1.0000 100 chr19:1383512-1384012 1.0000 100 chr15:74546098-74546598 1.0000 100 chr9:131635217-131635717 1.0000 100 chr14:68104415-68104915 1.0000 100 chr22:49942453-49942953 1.0000 100 chr13:35499042-35499542 1.0000 100 chr5:124747142-124747642 1.0000 100 chr9:124054660-124055160 1.0000 100 chr12:12266909-12267409 1.0000 100 chr1:236096993-236097493 1.0000 100 chr6:15956263-15956763 1.0000 100 chr15:78437537-78438037 1.0000 100 chr16:4615746-4616246 1.0000 100 chr1:30807363-30807863 1.0000 100 chr19:10653791-10654291 1.0000 100 chr17:50867402-50867902 1.0000 100 chr14:36835061-36835561 1.0000 100 chr9:18976686-18977186 1.0000 100 chr17:45320808-45321308 1.0000 100 chr5:59303249-59303749 1.0000 100 chr19:1039428-1039928 1.0000 100 chr1:81126917-81127417 1.0000 100 chr2:238240121-238240621 1.0000 100 chr9:97922047-97922547 1.0000 100 chr6:150418300-150418800 1.0000 100 chr7:131107860-131108360 1.0000 100 chr6:138593184-138593684 1.0000 100 chr10:87845950-87846450 1.0000 100 chr10:99621005-99621505 1.0000 100 chr1:183060418-183060918 1.0000 100 chr16:84618782-84619282 1.0000 100 chrX:136251459-136251959 1.0000 100 chr2:74147394-74147894 1.0000 100 chr7:101547512-101548012 1.0000 100 chr10:72204253-72204753 1.0000 100 chr21:32771776-32772276 1.0000 100 chr6:36874233-36874733 1.0000 100 chr21:36420053-36420553 1.0000 100 chr11:113014266-11301476 1.0000 100 chr14:76640829-76641329 1.0000 100 chr8:109611146-109611646 1.0000 100 chr10:35635417-35635917 1.0000 100 chr1:223714047-223714547 1.0000 100 chr16:1271712-1272212 1.0000 100 chr20:41003175-41003675 1.0000 100 chr5:124740945-124741445 1.0000 100 chr12:56115376-56115876 1.0000 100 chr19:40831741-40832241 1.0000 100 chr16:1826963-1827463 1.0000 100 chr16:15590846-15591346 1.0000 100 chr21:29217765-29218265 1.0000 100 chr20:50113559-50114059 1.0000 100 chr6:33391357-33391857 1.0000 100 chr19:4232522-4233022 1.0000 100 chr1:236604502-236605002 1.0000 100 chr19:17482813-17483313 1.0000 100 chr8:37302628-37303128 1.0000 100 chrUn_KI270467v1:3053-35 1.0000 100 chr15:67792451-67792951 1.0000 100 chr7:148982884-148983384 1.0000 100 chr12:124994092-12499459 1.0000 100 chr10:75379170-75379670 1.0000 100 chr10:116826808-11682730 1.0000 100 chr16:23148219-23148719 1.0000 100 chr5:1034969-1035469 1.0000 100 chr1:36384487-36384987 1.0000 100 chr17:3890065-3890565 1.0000 100 chr13:113296760-11329726 1.0000 100 chr1:16122849-16123349 1.0000 100 chrX:101407978-101408478 1.0000 100 chr6:82260144-82260644 1.0000 100 chr2:231677640-231678140 1.0000 100 chr10:124355060-12435556 1.0000 100 chr13:110965217-11096571 1.0000 100 chr7:139778225-139778725 1.0000 100 chr19:40549391-40549891 1.0000 100 chr17:60173312-60173812 1.0000 100 chr12:65630573-65631073 1.0000 100 chr16:22948800-22949300 1.0000 100 chr10:75358958-75359458 1.0000 100 chr9:132990075-132990575 1.0000 100 chr19:40348279-40348779 1.0000 100 chr2:173414948-173415448 1.0000 100 chr1:36397784-36398284 1.0000 100 chr3:194089421-194089921 1.0000 100 chr5:113513310-113513810 1.0000 100 chr15:74781508-74782008 1.0000 100 chr1:234700131-234700631 1.0000 100 chr1:41870060-41870560 1.0000 100 chr20:63543699-63544199 1.0000 100 chr10:132329852-13233035 1.0000 100 chr17:74514097-74514597 1.0000 100 chr20:63056827-63057327 1.0000 100 chr19:1267230-1267730 1.0000 100 chr12:96061775-96062275 1.0000 100 chr19:841255-841755 1.0000 100 chr6:24359556-24360056 1.0000 100 chr1:18602351-18602851 1.0000 100 chr22:37677206-37677706 1.0000 100 chr9:133734153-133734653 1.0000 100 chr17:80980639-80981139 1.0000 100 chr8:99323749-99324249 1.0000 100 chr19:40219784-40220284 1.0000 100 chr13:46052774-46053274 1.0000 100 chr19:49158344-49158844 1.0000 100 chr17:8631441-8631941 1.0000 100 chr19:3500826-3501326 1.0000 100 chr1:234723925-234724425 1.0000 100 chr10:93209023-93209523 1.0000 100 chr20:49713990-49714490 1.0000 100 chrUn_KI270467v1:2010-25 1.0000 100 chr19:3185110-3185610 1.0000 100 chr17:75105477-75105977 1.0000 100 chr6:52243254-52243754 1.0000 100 chr2:27719851-27720351 1.0000 100 chr7:2314679-2315179 1.0000 100 chr10:125973158-12597365 1.0000 100 chr1:10833914-10834414 1.0000 100 chr15:70494070-70494570 1.0000 100 chr12:93442112-93442612 1.0000 100 chr3:197298666-197299166 1.0000 100 chr6:87155289-87155789 1.0000 100 chr15:67139175-67139675 1.0000 100 chr4:152536433-152536933 1.0000 100 chr5:73394047-73394547 1.0000 100 chr19:40920927-40921427 1.0000 100 chr6:28942009-28942509 1.0000 100 chr16:778815-779315 1.0000 100 chr17:77233776-77234276 1.0000 100 chr6:44265549-44266049 1.0000 100 chr15:72375773-72376273 1.0000 100 chr1:1308062-1308562 1.0000 100 chr1:155244577-155245077 1.0000 100 chr9:136579540-136580040 1.0000 100 chr17:7013093-7013593 1.0000 100 chr1:40476819-40477319 1.0000 100 chrUn_KI270467v1:2854-33 1.0000 100 chr17:78558312-78558812 1.0000 100 chr3:72887617-72888117 1.0000 100 chr19:4197621-4198121 1.0000 100 chr19:4815149-4815649 1.0000 100 chr19:10194953-10195453 1.0000 100 chr17:76264673-76265173 1.0000 100 chr15:74790435-74790935 1.0000 100 chr16:1308283-1308783 1.0000 100 chr8:140464070-140464570 1.0000 100 chr7:101165591-101166091 1.0000 100 chr7:128862397-128862897 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF24.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF24.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF24.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.261 C 0.239 G 0.239 T 0.261 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF24.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.247 C 0.253 G 0.253 T 0.247 ******************************************************************************** ******************************************************************************** MOTIF GAATGAATGAATGAATGAATGA MEME-1 width = 22 sites = 182 llr = 3448 E-value = 1.1e-861 ******************************************************************************** -------------------------------------------------------------------------------- Motif GAATGAATGAATGAATGAATGA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 198::99::a8::a9::97117 pos.-specific C 1::1:::::::1:::1::1111 probability G 812191119:2:a:119:3181 matrix T 1::8:::9:::9:::81::711 bits 2.0 1.8 * * 1.6 * * ** 1.4 * *** ** **** ** Relative 1.2 * ************** Entropy 1.0 ***************** (27.3 bits) 0.8 ******************* * 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel GAATGAATGAATGAATGAATGA consensus G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGAATGAATGAATGAATGA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr1:40476819-40477319 + 9 5.03e-14 agataACt gaatgaatgaatgaatgaatga gtgaatgaat chr6:44265549-44266049 - 19 5.03e-14 GGGAAAGAGT GAATGAATGAATGAATGAATGA GTGAATGAAT chr6:28942009-28942509 + 42 5.03e-14 aaggatgagt gaatgaatgaatgaatgaatga atgaatACTC chr20:49713990-49714490 - 60 5.03e-14 ATGGTGAATT GAATGAATGAATGAATGAATGA ATGAGGGTGT chr19:49158344-49158844 - 42 5.03e-14 ATGAATGAAT GAATGAATGAATGAATGAATGA AACAGAAATA chr19:1267230-1267730 + 42 5.03e-14 ggcactggct gaatgaatgaatGAATGAATGA ACACGGCGCT chr16:22948800-22949300 - 46 5.03e-14 CACGTCAAAT GAATGAATGAATGAATGAATGA ACGAACGAAC chr12:65630573-65631073 + 58 5.03e-14 ATACGtgagt gaatgaatgaatgaatgaatga GTTCTCCATA chr20:50113559-50114059 - 10 5.03e-14 ATGAACGAAT GAATGAATGAATGAATGAATGA ATTGGGTAG chr1:223714047-223714547 - 58 5.03e-14 GTGAGTAAAT GAATGAATGAATGAATGAATGA ATACTGTGAA chr6:36874233-36874733 + 19 5.03e-14 cacgtttgtt gaatgaatgaatGAATGAATGA GCGGACTGGG chr14:23352889-23353389 - 51 5.03e-14 GTGAATGGGT GAATGAATGAATGAATGAATGA TGGCAAATGA chr6:10414233-10414733 + 32 5.03e-14 GGGGAAGAAA gaatgaatgaatgaatgaatga atgaatAGAA chr14:99192665-99193165 + 6 5.03e-14 tgagt gaatgaatgaatgaatgaatga atgagtgaat chr1:85062554-85063054 + 54 5.03e-14 GTCAGTTaat gaatgaatgaatgaatgaatga atgaatgaat chr15:78317419-78317919 + 3 5.03e-14 at gaatgaatgaatgaatgaatga aatgaatgaa chr3:185283243-185283743 + 32 5.03e-14 GTTGTCGAAG gaatgaatgaatgaatgaatga atgaaCCAAC chr12:13099906-13100406 + 29 5.03e-14 TAACATCTat gaatgaatgaatgaatgaatga atgaatgaat chr13:42110329-42110829 - 59 5.03e-14 GTAAAACAAC GAATGAATGAATGAATGAATGA TTATCCTTCA chr12:116278171-11627867 - 60 5.03e-14 TTTATGTAAT GAATGAATGAATGAATGAATGA GTGCACACAG chr19:35774200-35774700 + 14 5.03e-14 gagtttgagt gaatgaatgaatgaatgaatga atgaacagac chr20:46021234-46021734 + 6 5.03e-14 GTGCC gaatgaatgaatgaatgaatga atgaGCCCCA chr20:50284442-50284942 + 14 5.03e-14 CAgaataaat gaatgaatgaatgaatgaatga atgaatgGAA chr19:10087593-10088093 + 28 5.03e-14 CCCTTGTGTt gaatgaatgaatgaatgaatga atgaatgaat chr9:136980634-136981134 - 36 5.03e-14 ATGAATGAAT GAATGAATGAATGAATGAATGA ATGGAGTGGC chr1:227897683-227898183 + 52 5.03e-14 ttgaacaaag gaatgaatgaatgaatgaatga atgaactagt chr17:17742212-17742712 + 5 5.03e-14 GTTt gaatgaatgaatgaatgaatga atgaacgagt chr12:52926707-52927207 + 31 5.03e-14 TTGATTCACt gaatgaatgaatgaatgaatga atgaatgaat chr19:8367520-8368020 - 78 5.03e-14 T GAATGAATGAATGAATGAATGA GGCAGCAGGT chr10:132942674-13294317 - 36 5.03e-14 ATGAATGAAT GAATGAATGAATGAATGAATGA ATGAGCCGAC chr17:45383887-45384387 - 45 5.03e-14 ATGAATGAAC GAATGAATGAATGAATGAATGA ATCTCCCTCT chr9:133734153-133734653 - 52 1.02e-13 ATGAATGAGT GAATGAATGAATGAATGAGTGA ATGAATGAGT chr17:36825034-36825534 + 40 1.02e-13 atgaatgagt gaatgaatgaatgaatgagtga atgagtgaat chr7:66075178-66075678 + 37 1.02e-13 cgtgtttgtt gaatgaatgaatGAATGAGTGA ATGAGCGAAC chr1:18602351-18602851 + 51 2.05e-13 atgcatgagt gaatgaatgagtgaatgaatga atgaatgcat chr1:22271812-22272312 - 57 2.05e-13 GTGAATGCAT GAATGAATGAGTGAATGAATGA ATGGTAGTGA chr11:117907617-11790811 + 78 2.05e-13 gatgaatgat gagtgaatgaatgaatgaatga a chr12:89526225-89526725 + 67 2.05e-13 TGTGCGTGat gaatgaatgagtgaatgaatga ataaatgTTG chr17:79914967-79915467 - 26 2.05e-13 GTGAATGGAT GAATGAATGAGTGAATGAATGA ATGAAGTGGG chr4:152536433-152536933 + 73 3.07e-13 aatgtttgat gaatgaatgaatgaatgaatgc ctctct chr1:36384487-36384987 + 9 4.59e-13 CATGTGAG Aaatgaatgaatgaatgaatga GGACTGTCTA chr19:4815149-4815649 - 76 6.14e-13 AGT GAATGAATGAATGAGTGAATGA GTGAGTGAAT chr2:173414948-173415448 - 34 8.68e-13 AGAAAGACAT GAATGAATGAATGAATGAATGT TCGTACTCTG chr7:101547512-101548012 - 59 8.68e-13 ATGGACAAAT GAATGAATGAATGAACGAATGA ATGAATAAAT chr19:1039428-1039928 + 37 8.68e-13 AGCGTTCGTG gaatgaatgaatgaacgaatga TCTAGTGGAA chr6:30646476-30646976 - 53 8.68e-13 TAAGCCTGCT GAATGAATGAATGAATGAATGT ATCCATCTAT chr16:778815-779315 - 22 1.23e-12 ATGAGTGTGT GAATGAATGAGTGAATGAGTGA GTGAATGAGT chr1:10833914-10834414 - 12 1.23e-12 GTAAATGAGT GAATGAATGAGTGAATGAGTGA ACAAATGATT chr19:841255-841755 + 27 1.23e-12 ATGAGTGAGT GAATGAATGAGTGAATGAGTGA ATGAGTGAAC chr21:34844330-34844830 + 66 1.23e-12 atgagtgagt gagtgaatgaatgaatgagtga GCCCCTTTCC chr20:63543699-63544199 + 62 2.00e-12 tgaatgagat gaatggatgaatgaatgaatga gtgaattagt chr16:23148219-23148719 + 42 2.15e-12 gtgagtgagt gaataaatgaatgaatgaatga atCTCCTTAA chr19:4232522-4233022 + 46 2.15e-12 atgaatgaag gaatgaattaatgaatgaatga aggaatgaat chr3:197298666-197299166 - 78 2.45e-12 T GAATGAATGAATGAATGAGCGA ATGAATGAAC chr19:2032438-2032938 - 65 2.45e-12 GCACATAACA GATTGAATGAATGAATGAATGA AGGCACACAG chr12:96061775-96062275 + 24 3.03e-12 gatgtctctg gaatgaaggaatGAATGAGTGA ATGACTGGGT chr2:74147394-74147894 + 55 3.03e-12 CGTTGtcgct gagtgaatgaatgaatgaaaga atgaATGAGA chr6:24359556-24360056 + 15 3.44e-12 AATAACATTT AAGTGAATGAATGAATGAATGA GAAACAGAGC chr20:63056827-63057327 - 69 3.44e-12 GAGTATGTGT GAATGAATGAGTGAATGAAGGA ATGAATAAGT chr9:136581066-136581566 - 41 4.32e-12 ATGAATGAGG GAATGAGTGAATGAATGAGTGA GTGAGCAAAT chr3:45618045-45618545 - 18 5.20e-12 TCTACCAAGT GAGTGAAGGAATGAATGAATGA CGCACGCAAT chr8:118109177-118109677 + 48 5.20e-12 atgaattaat aaatgaatgaatgaatgaatgc atgcatgcat chr4:48016744-48017244 - 58 1.03e-11 CCGACTGACT GAATGAATGAATGAGTGAACGA CTACGTTTAG chr8:47292665-47293165 + 22 1.03e-11 atgaatgaag gagtgaatgaatgaatgagtgC TGCACAGATG chr9:124862029-124862529 - 26 1.29e-11 AAGGTTTCCC GAAGGAATGAATGAACGAATGA CTGAATGGAC chr21:43718655-43719155 + 29 1.29e-11 CACaatggtt gaatgaatgaatgaacgaacga atgaaCGGCG chr7:148982884-148983384 - 49 1.50e-11 AAAAATGAAT GAATGAATGTATGAATGAATGA AGTCCCAGAT chr10:101818682-10181918 - 67 1.50e-11 GATGTCTACT GAATGAAGGAATGAACGAATGA TTACATTTTA chr19:10194953-10195453 - 38 1.95e-11 CATCACACCT GAAAGAATGAATGAATGAATGC CTCGGGCACC chr19:4197621-4198121 + 78 1.95e-11 acgagtgagt gaatgaatgaacgagtgaatga a chr8:140464070-140464570 + 39 2.24e-11 tcagttcatt caatgaatgaaCGAATGAATGA AACGCCAGAG chr15:70100891-70101391 - 56 2.49e-11 AAAGGGCTGG GCATGAATGAATGAATGAATGC CTTTTCTTCA chr9:136579540-136580040 - 1 2.86e-11 GCGAAGGAGT GAATGAGTGAGTGAATGAGTGA chr22:49942453-49942953 + 69 2.86e-11 gtgagtgaaa gaatgagtgagtgaatgagtga ttgagtgaat chr9:136150600-136151100 + 2 2.86e-11 t gagtgaatgagtgagtgaatga gtgagtgagt chr19:18682942-18683442 + 62 3.29e-11 aatattcctt gaatgaatgaatGCATGAGTGA CCAACGCCCT chr19:1313587-1314087 + 39 3.29e-11 TCTTCAGGAG GAAGAAATGAATGAATGAATGA AGTGGAAGGT chr6:134111066-134111566 - 53 4.16e-11 AGACTGTCTT GAATGAATGAATGAATGCAGGA TTGGTGCTCA chr3:72887617-72888117 + 77 4.81e-11 GTAaacgaac gaacgaacgaatgaatgaatga aG chr7:139778225-139778725 + 56 4.81e-11 GGTAGGAGTG GAATGAATGAATGAAGGAGTGG GCGCGCGCCG chr2:231037039-231037539 + 38 4.81e-11 tgggatggac gaaCAAATGAATGAATGAATGA CTCTCTGTTT chr7:128862397-128862897 + 42 6.84e-11 accaaggaac gagtgaatgaacgaatgaatgC CCGCGAAGGA chr17:80980639-80981139 + 38 6.84e-11 atgagtgaga gaatgaatgagtaaatgagtga gccagtgagg chr19:17482813-17483313 + 1 7.72e-11 . gaatgaatgagggaatgagtga aggagggaat chr1:15799220-15799720 - 53 7.72e-11 AAGAGTGAGT GAATGAATGAACAAATGAATGA ATGAAGCGGG chr6:20091888-20092388 + 43 7.72e-11 TTCAGAGTGt gaatgaacaaatgaatgaatga acaaatgaat chr7:101165591-101166091 + 3 8.51e-11 at gaatgaatgaatgaatgaaATG CTGAAGCGGG chrX:136496486-136496986 - 34 9.68e-11 AATGCGGAAT GAGCGAATGAATGAACGAATGA GGGGTAGAAG chr16:29273505-29274005 + 20 1.40e-10 atgagtggat gagtgagtgagtgaatgagtga atcgtgaatg chr16:88247420-88247920 + 28 1.40e-10 atgagtggat gagtgagtgagtgaatgagtga atcgtgaatg chr1:14742236-14742736 + 49 1.61e-10 GTGCTtgaat gaatgaaggaatgagcgaatga aAAAAAAACC chr2:230864448-230864948 + 42 2.03e-10 CGTGACGGCT GAATGAAtgagtgagcgagtga gtgagtgagt chr11:1201699-1202199 + 77 2.03e-10 gcgaatgagt gagagaatgagtgaatgagtga at chr15:74790435-74790935 - 76 2.30e-10 AAT GAATGAATGAACGAATGAAAAA AAGGGGACGC chr3:14603191-14603691 + 18 2.58e-10 ATGAATATGT GAATAAGTGAGTGAATGAATGA ATCAGCGCAT chr5:1034969-1035469 + 39 2.87e-10 acgagtgagt taatgaatgagtgaacgagtga gttaatgaat chr9:132990075-132990575 - 52 3.66e-10 ATGAGCAAAT GAGTGAACAAATGAATGAATGA CTGAACAAAT chrX:136251459-136251959 - 47 3.66e-10 AATGTTCTTT AAATGAATGAATGAATGAGGAA GGAATGTTAC chr1:17011059-17011559 - 33 4.58e-10 AACCCCTCTG GGCTGAATGAATGAATGAATGG CGTTGGGGGA chr17:8631441-8631941 - 79 5.13e-10 . GACTGAACGAGTGAATGAATGA GGTGAATAAA chr19:55118233-55118733 + 50 7.11e-10 aatatttttg gaatgaatgaatGAATGGGTTC ACCAGGGCAC chr1:109901822-109902322 - 18 7.11e-10 AAGCTTTGTT GAATGGATGAATGCATGAGTGA ATGAATGGAT chr19:30069387-30069887 + 24 7.89e-10 GACACTCAGg gaaggaatgaaggaaggaatga TGCCTGCCCA chr1:1308062-1308562 + 66 8.73e-10 GGGCGGCGGC GAATGAATGAGCGAGTGAACGA ATGCACGCCC chr3:45509072-45509572 + 47 8.73e-10 ACCATCTGTT GAGTGAATGAATGAGTGAACAA AAGGGAAACA chr1:41870060-41870560 - 11 9.77e-10 ATGGATGACT CAGTGAATGAGTGAATGAGTCA CCCAATCTAG chr19:45424003-45424503 - 4 1.09e-09 AATAGGTGTG GAATAAATGAATGAATGAGGAA ACT chr19:40549391-40549891 - 19 1.34e-09 AACTATGGAT GAGTGAATAAATAAATGAGTGA CTTCATGAAT chr19:29810997-29811497 + 67 1.66e-09 CAGATTCCTt gaatgaatgaatgaacgaccca atgcactgac chr21:36420053-36420553 - 77 1.84e-09 AT GAATGAATGAATGAACAAAGGC ATGGCCATGC chr16:4615746-4616246 + 3 1.84e-09 tt cagtgaatgaatGAATGAGCCA CTTAAAAGCT chr6:2998453-2998953 + 51 2.27e-09 AGTTACAGCA Aaatgaacgaatgaatgaacca ataaatgTCT chr7:2314679-2315179 - 25 2.79e-09 GTGAGTGTGT GAGTGGATGAATGAATGTAGGA TGCAGTGAGT chr6:6004559-6005059 - 67 2.79e-09 ATGAGAGGTC GAACGAATGAATGAACGGATGG AAACCGCACA chr7:2314881-2315381 - 3 2.79e-09 GTGAGTGTGT GAGTGGATGAATGAATGTAGGA TG chr10:124355060-12435556 + 43 3.08e-09 aatacaggct gaatgaatgaatGAACTGATGC AACCAAAACT chr2:238240121-238240621 - 63 3.08e-09 GGAGGGAAAT GAATGAATTAATGGGTGAATGA ATGAGTGGAC chr20:41003175-41003675 + 49 3.41e-09 CATCTTTTAC AAACGAATGAATGAATGAGAAA TGTGCCTTTC chr7:98686547-98687047 + 77 3.41e-09 atggacaaac aaatgaatgaacgagtaaatga at chr16:1308283-1308783 + 6 3.78e-09 agtgg gaatgaatgagtaagtgaggga gggaatgagt chr6:49550540-49551040 + 39 4.18e-09 TTGAACCGGT CAAAGAAGGAACGAATGAATGA CCCTTTTGCC chr15:74781508-74782008 + 46 4.60e-09 caggaaatgt tggtgaatgaatgaatGAAGGC TTTCTGCTGC chr22:37677206-37677706 - 33 5.08e-09 GGACCGGACT GAGCCAGTGAATGAATGAATGA CCAGACGCAG chr16:84618782-84619282 - 79 7.50e-09 . GAATGAGTCAGTGAAGGAATGA GGAAGACAGA chr19:13758313-13758813 + 67 7.50e-09 atgaatgaac aaatgaattaacgaataaatga accaaaaaaa chr12:93442112-93442612 - 10 1.10e-08 TGAGCTGAAA GAACGAACGCGTGAATGAATGA ATGGGATAC chr22:20496077-20496577 - 62 1.20e-08 GGGAGACAGG GAGGGAGTGAATGAGTGAGGGA GGAAGGGAAT chr2:27719851-27720351 + 1 1.45e-08 . gaatgaatgagtgagtGTGAGC ATAAAGAAAG chr19:3500826-3501326 - 27 1.45e-08 TTTATTACAT ACATGAATGAATGAACGACTGC ATTTCTTCCT chr7:656950-657450 + 13 1.45e-08 gtgaacaaat gaatggatgcatgagtgaatgt gtggatgggt chrX:153333629-153334129 - 50 1.45e-08 ACCAGCAGAC GAAGGAAGGAACGAAGGAATGG AAGGGACCTC chr15:74196073-74196573 - 1 1.59e-08 CACAAATATC TATGGAATGAATGAATGAAGGG chr10:116826808-11682730 + 51 1.74e-08 GATGTTGGCt gaatgaatcactgaattaatga atgTGTGCTC chr1:200890670-200891170 + 60 2.09e-08 gaaAACCGGG AAGTGAATGAATGGATGAACGG GGACACAGCA chr5:73394047-73394547 - 30 2.51e-08 AGATACTTTT GAGTGAATGAATGCATGGAAGC ATGAATGCAT chr21:25608033-25608533 + 1 3.59e-08 . gaatgaatGAATGAATGCCCTT GCAGGCAAAC chr6:116680675-116681175 + 38 3.92e-08 cacgcacgcg tgaagaatgaatgaatgaGGGG TCGTCCCTTT chr1:224873198-224873698 - 44 4.28e-08 AGAGAAAGGA AAGAGAATAAATGAATGAGTAA TGAATGAGTG chr4:5037945-5038445 - 49 4.67e-08 ATGTTCAGCA AAATGAAAGAATGAATGAACAG CTGAATGGTT chr12:124994092-12499459 - 10 5.55e-08 CATTCAAACG CGGTGAATGAATGAATGAGACG CGCGGCAGG chr19:47417718-47418218 + 54 5.55e-08 CCAGGCACAA GAATGAATGCATGATTGAGACA TTTGGCACAt chr5:95644278-95644778 + 67 6.59e-08 AAGGCTAAAA GAACAAATGAAGGAAGGAAAGA AAAGGTAGTA chr16:50806532-50807032 + 28 7.17e-08 CGGAATCTGC AAAGGAATGAATGAATTACAAA TCTGTGGCTT chr14:76640829-76641329 + 36 1.00e-07 aatatttggt gaatcaatgaatGAACAGATGG ACTTGCTCCA chr6:2985946-2986446 - 64 1.00e-07 AAAGTTTGTA GAATGAATGAAACAATTAGTTA CACCACAGTT chr17:76264673-76265173 + 39 1.28e-07 TGTTCTGTTT CAATGAAGTAATGAATGAACTT GGCCGCACCA chr13:46052774-46053274 - 77 1.39e-07 TT GAACGAATGAATGAGTGGCTCT AGGTACTGTC chr12:6937858-6938358 - 40 1.64e-07 AGCGCAGAGG GAAGGAAGGAAAGAGGGAAAGA AGGCGGTGGC chr17:77002219-77002719 - 13 1.93e-07 AATATTTGCC GAATGAATGAATGAACCCAAGT CAGGCGTCCC chr12:2057094-2057594 + 33 2.09e-07 ataaatgtct gcgtgaatgaatgaatGCGACC TGGCCAGACC chr17:50867402-50867902 + 29 2.45e-07 GGGACGGGGA GAAAGAAGCAATGAATGAAACG CCCATCGCCT chr1:235917364-235917864 - 68 3.10e-07 TCAGAGCATC AAATGAATGAGTCAATGTGGGC TTGCTTTTAT chr5:113513310-113513810 + 1 3.90e-07 . gcaggaattaatGAAGGACTAA ACGAAGTAGC chr1:156444383-156444883 - 76 4.21e-07 AAA GAATCAGTGAATAAATGAAACT GAATGAATGA chr8:99323749-99324249 + 47 5.70e-07 AATGTTAATG GGGTGAAGTAATGAATGCAGGC TGAGTTACAA chr6:35044916-35045416 + 19 5.70e-07 aggatgatgt cactcagggaatgaatgaatta caccAAAACT chr6:167839254-167839754 + 53 5.70e-07 actttgtcag agatgaaggaatgaagtaatct gtgatctcaa chr19:34364609-34365109 + 50 6.15e-07 tatagagttt tgtcgaatgaatgaatGAAGCC GACTAGTGCA chr12:114662474-11466297 + 10 6.62e-07 AGTGATGAT TAATTGCTGAATAAATGAATGA TAACGTAAAT chr1:65254894-65255394 - 60 7.68e-07 GGCTCGATAA AAATTGTGGAATGAATGAATGG AGTGAGTCAG chr16:31072987-31073487 + 24 1.03e-06 AAGGATGAGG AGATGAACAAATGAATGGACGG AAGGCCGAAT chr9:37415230-37415730 - 40 1.11e-06 AGTCAATATT CGTTAAATAAACGAATGAGTGA TGCAGGCGGT chr16:31700186-31700686 - 33 1.37e-06 GCTGAATGAG GCCTGAATGAATGATTGTCTGC AGCCCTTTTC chr19:33304587-33305087 - 22 1.47e-06 GCCTCGTGTG CATTTGATGAATGAATGAAGTC CCATCCCCTA chr19:40219784-40220284 + 77 1.58e-06 catccatata tagttgttgaatgaatgagtGT GT chr2:231677640-231678140 - 23 1.94e-06 ACATGTTTCA GAATGAATGAATGAGGAGGGTT TTGGAAGGAG chr20:20212561-20213061 - 43 2.08e-06 TACACAACAA TACTGACTGAATGAATGACATC AATTAACTCT chr20:362562-363062 + 78 2.56e-06 ATCCTGGAGG CCAGgaatgagggagtaagtga g chr12:806436-806936 + 67 2.74e-06 TGGGAAGACA AAGGGAAATAGGGAATGAGTGA TTTGTGGAGA chr1:208046403-208046903 + 30 3.14e-06 gaagttttcc catggaagaaatgaatgaaatt taatctgaag chr12:12398170-12398670 + 4 3.35e-06 GGA GAAGGAATGTGAGAATGAGCTG CTTGCTACAA chr1:155226948-155227448 + 26 3.59e-06 GTCACATGTC CGAAGAATGAATGAATTATATA CCTTTCTTCC chr1:36397784-36398284 - 39 3.83e-06 AATGAATGCG TGCGGAATGAATGAACGACTCT AGTGAAAGAG chr3:182212315-182212815 + 30 4.99e-06 CTGAGTAATC CCATGAATTAATGAGGTAAACA TTTGCCCCCA chr10:1498786-1499286 - 62 6.05e-06 TGATTAATGA AGAGTAATGAGTGAATGACGAG TAATGAGTGA chr7:36128896-36129396 - 37 6.45e-06 CACAGTGCTA TGATGAAGAAATGAATTTCTGG AACCAGCTGA chr1:30807363-30807863 - 16 7.81e-06 CGCAGCGAGG GGAGGAAGAAATGAAGAGATGT CCCCGGGGAG chr10:132329852-13233035 - 24 8.85e-06 GTGAGCCTCC CAACGTAGGAACGAATGAAGTG TTCGTGTTGA chr10:75358958-75359458 - 29 9.42e-06 CAAAGGGGCA GAGGGAGTGAGTCAATTAACAC CTGCCTTTTT chr20:63339255-63339755 + 70 1.13e-05 CGTCATATCC AAACAGATGAATGAATTACATC ATATTCACA chr1:155244577-155245077 + 53 2.32e-05 gagagagagc gagagagcgagagagcgagcga gagagagaga chr12:125064920-12506542 + 4 4.34e-05 aaA TAGCGAATGAATGATGTACACG TGTAGGAAAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGAATGAATGAATGAATGA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:40476819-40477319 5e-14 8_[+1]_70 chr6:44265549-44266049 5e-14 18_[-1]_60 chr6:28942009-28942509 5e-14 41_[+1]_37 chr20:49713990-49714490 5e-14 59_[-1]_19 chr19:49158344-49158844 5e-14 41_[-1]_37 chr19:1267230-1267730 5e-14 41_[+1]_37 chr16:22948800-22949300 5e-14 45_[-1]_33 chr12:65630573-65631073 5e-14 57_[+1]_21 chr20:50113559-50114059 5e-14 9_[-1]_69 chr1:223714047-223714547 5e-14 57_[-1]_21 chr6:36874233-36874733 5e-14 18_[+1]_60 chr14:23352889-23353389 5e-14 50_[-1]_28 chr6:10414233-10414733 5e-14 31_[+1]_47 chr14:99192665-99193165 5e-14 5_[+1]_73 chr1:85062554-85063054 5e-14 53_[+1]_25 chr15:78317419-78317919 5e-14 2_[+1]_76 chr3:185283243-185283743 5e-14 31_[+1]_47 chr12:13099906-13100406 5e-14 28_[+1]_50 chr13:42110329-42110829 5e-14 58_[-1]_20 chr12:116278171-11627867 5e-14 59_[-1]_19 chr19:35774200-35774700 5e-14 13_[+1]_65 chr20:46021234-46021734 5e-14 5_[+1]_73 chr20:50284442-50284942 5e-14 13_[+1]_65 chr19:10087593-10088093 5e-14 27_[+1]_51 chr9:136980634-136981134 5e-14 35_[-1]_43 chr1:227897683-227898183 5e-14 51_[+1]_27 chr17:17742212-17742712 5e-14 4_[+1]_74 chr12:52926707-52927207 5e-14 30_[+1]_48 chr19:8367520-8368020 5e-14 77_[-1]_1 chr10:132942674-13294317 5e-14 35_[-1]_43 chr17:45383887-45384387 5e-14 44_[-1]_34 chr9:133734153-133734653 1e-13 51_[-1]_27 chr17:36825034-36825534 1e-13 39_[+1]_39 chr7:66075178-66075678 1e-13 36_[+1]_42 chr1:18602351-18602851 2.1e-13 50_[+1]_28 chr1:22271812-22272312 2.1e-13 56_[-1]_22 chr11:117907617-11790811 2.1e-13 77_[+1]_1 chr12:89526225-89526725 2.1e-13 66_[+1]_12 chr17:79914967-79915467 2.1e-13 25_[-1]_53 chr4:152536433-152536933 3.1e-13 72_[+1]_6 chr1:36384487-36384987 4.6e-13 8_[+1]_70 chr19:4815149-4815649 6.1e-13 75_[-1]_3 chr2:173414948-173415448 8.7e-13 33_[-1]_45 chr7:101547512-101548012 8.7e-13 58_[-1]_20 chr19:1039428-1039928 8.7e-13 36_[+1]_42 chr6:30646476-30646976 8.7e-13 52_[-1]_26 chr16:778815-779315 1.2e-12 21_[-1]_57 chr1:10833914-10834414 1.2e-12 11_[-1]_67 chr19:841255-841755 1.2e-12 26_[+1]_52 chr21:34844330-34844830 1.2e-12 65_[+1]_13 chr20:63543699-63544199 2e-12 61_[+1]_17 chr16:23148219-23148719 2.1e-12 41_[+1]_37 chr19:4232522-4233022 2.1e-12 45_[+1]_33 chr3:197298666-197299166 2.5e-12 77_[-1]_1 chr19:2032438-2032938 2.5e-12 64_[-1]_14 chr12:96061775-96062275 3e-12 23_[+1]_55 chr2:74147394-74147894 3e-12 54_[+1]_24 chr6:24359556-24360056 3.4e-12 14_[+1]_64 chr20:63056827-63057327 3.4e-12 68_[-1]_10 chr9:136581066-136581566 4.3e-12 40_[-1]_38 chr3:45618045-45618545 5.2e-12 17_[-1]_61 chr8:118109177-118109677 5.2e-12 47_[+1]_31 chr4:48016744-48017244 1e-11 57_[-1]_21 chr8:47292665-47293165 1e-11 21_[+1]_57 chr9:124862029-124862529 1.3e-11 25_[-1]_53 chr21:43718655-43719155 1.3e-11 28_[+1]_50 chr7:148982884-148983384 1.5e-11 48_[-1]_30 chr10:101818682-10181918 1.5e-11 66_[-1]_12 chr19:10194953-10195453 2e-11 37_[-1]_41 chr19:4197621-4198121 2e-11 77_[+1]_1 chr8:140464070-140464570 2.2e-11 38_[+1]_40 chr15:70100891-70101391 2.5e-11 55_[-1]_23 chr9:136579540-136580040 2.9e-11 [-1]_78 chr22:49942453-49942953 2.9e-11 68_[+1]_10 chr9:136150600-136151100 2.9e-11 1_[+1]_77 chr19:18682942-18683442 3.3e-11 61_[+1]_17 chr19:1313587-1314087 3.3e-11 38_[+1]_40 chr6:134111066-134111566 4.2e-11 52_[-1]_26 chr3:72887617-72888117 4.8e-11 76_[+1]_2 chr7:139778225-139778725 4.8e-11 55_[+1]_23 chr2:231037039-231037539 4.8e-11 37_[+1]_41 chr7:128862397-128862897 6.8e-11 41_[+1]_37 chr17:80980639-80981139 6.8e-11 37_[+1]_41 chr19:17482813-17483313 7.7e-11 [+1]_78 chr1:15799220-15799720 7.7e-11 52_[-1]_26 chr6:20091888-20092388 7.7e-11 42_[+1]_36 chr7:101165591-101166091 8.5e-11 2_[+1]_76 chrX:136496486-136496986 9.7e-11 33_[-1]_45 chr16:29273505-29274005 1.4e-10 19_[+1]_59 chr16:88247420-88247920 1.4e-10 27_[+1]_51 chr1:14742236-14742736 1.6e-10 48_[+1]_30 chr2:230864448-230864948 2e-10 41_[+1]_37 chr11:1201699-1202199 2e-10 76_[+1]_2 chr15:74790435-74790935 2.3e-10 75_[-1]_3 chr3:14603191-14603691 2.6e-10 17_[+1]_61 chr5:1034969-1035469 2.9e-10 38_[+1]_40 chr9:132990075-132990575 3.7e-10 51_[-1]_27 chrX:136251459-136251959 3.7e-10 46_[-1]_32 chr1:17011059-17011559 4.6e-10 32_[-1]_46 chr17:8631441-8631941 5.1e-10 78_[-1] chr19:55118233-55118733 7.1e-10 49_[+1]_29 chr1:109901822-109902322 7.1e-10 17_[-1]_61 chr19:30069387-30069887 7.9e-10 23_[+1]_55 chr1:1308062-1308562 8.7e-10 65_[+1]_13 chr3:45509072-45509572 8.7e-10 46_[+1]_32 chr1:41870060-41870560 9.8e-10 10_[-1]_68 chr19:45424003-45424503 1.1e-09 3_[-1]_75 chr19:40549391-40549891 1.3e-09 18_[-1]_60 chr19:29810997-29811497 1.7e-09 66_[+1]_12 chr21:36420053-36420553 1.8e-09 76_[-1]_2 chr16:4615746-4616246 1.8e-09 2_[+1]_76 chr6:2998453-2998953 2.3e-09 50_[+1]_28 chr7:2314679-2315179 2.8e-09 24_[-1]_54 chr6:6004559-6005059 2.8e-09 66_[-1]_12 chr7:2314881-2315381 2.8e-09 2_[-1]_76 chr10:124355060-12435556 3.1e-09 42_[+1]_36 chr2:238240121-238240621 3.1e-09 62_[-1]_16 chr20:41003175-41003675 3.4e-09 48_[+1]_30 chr7:98686547-98687047 3.4e-09 76_[+1]_2 chr16:1308283-1308783 3.8e-09 5_[+1]_73 chr6:49550540-49551040 4.2e-09 38_[+1]_40 chr15:74781508-74782008 4.6e-09 45_[+1]_33 chr22:37677206-37677706 5.1e-09 32_[-1]_46 chr16:84618782-84619282 7.5e-09 78_[-1] chr19:13758313-13758813 7.5e-09 66_[+1]_12 chr12:93442112-93442612 1.1e-08 9_[-1]_69 chr22:20496077-20496577 1.2e-08 61_[-1]_17 chr2:27719851-27720351 1.5e-08 [+1]_78 chr19:3500826-3501326 1.5e-08 26_[-1]_52 chr7:656950-657450 1.5e-08 12_[+1]_66 chrX:153333629-153334129 1.5e-08 49_[-1]_29 chr15:74196073-74196573 1.6e-08 [-1]_78 chr10:116826808-11682730 1.7e-08 50_[+1]_28 chr1:200890670-200891170 2.1e-08 59_[+1]_19 chr5:73394047-73394547 2.5e-08 29_[-1]_49 chr21:25608033-25608533 3.6e-08 [+1]_78 chr6:116680675-116681175 3.9e-08 37_[+1]_41 chr1:224873198-224873698 4.3e-08 43_[-1]_35 chr4:5037945-5038445 4.7e-08 48_[-1]_30 chr12:124994092-12499459 5.5e-08 9_[-1]_69 chr19:47417718-47418218 5.5e-08 53_[+1]_25 chr5:95644278-95644778 6.6e-08 66_[+1]_12 chr16:50806532-50807032 7.2e-08 27_[+1]_51 chr14:76640829-76641329 1e-07 35_[+1]_43 chr6:2985946-2986446 1e-07 63_[-1]_15 chr17:76264673-76265173 1.3e-07 38_[+1]_40 chr13:46052774-46053274 1.4e-07 76_[-1]_2 chr12:6937858-6938358 1.6e-07 39_[-1]_39 chr17:77002219-77002719 1.9e-07 12_[-1]_66 chr12:2057094-2057594 2.1e-07 32_[+1]_46 chr17:50867402-50867902 2.4e-07 28_[+1]_50 chr1:235917364-235917864 3.1e-07 67_[-1]_11 chr5:113513310-113513810 3.9e-07 [+1]_78 chr1:156444383-156444883 4.2e-07 75_[-1]_3 chr8:99323749-99324249 5.7e-07 46_[+1]_32 chr6:35044916-35045416 5.7e-07 18_[+1]_60 chr6:167839254-167839754 5.7e-07 52_[+1]_26 chr19:34364609-34365109 6.1e-07 49_[+1]_29 chr12:114662474-11466297 6.6e-07 9_[+1]_69 chr1:65254894-65255394 7.7e-07 59_[-1]_19 chr16:31072987-31073487 1e-06 23_[+1]_55 chr9:37415230-37415730 1.1e-06 39_[-1]_39 chr16:31700186-31700686 1.4e-06 32_[-1]_46 chr19:33304587-33305087 1.5e-06 21_[-1]_57 chr19:40219784-40220284 1.6e-06 76_[+1]_2 chr2:231677640-231678140 1.9e-06 22_[-1]_56 chr20:20212561-20213061 2.1e-06 42_[-1]_36 chr20:362562-363062 2.6e-06 77_[+1]_1 chr12:806436-806936 2.7e-06 66_[+1]_12 chr1:208046403-208046903 3.1e-06 29_[+1]_49 chr12:12398170-12398670 3.4e-06 3_[+1]_75 chr1:155226948-155227448 3.6e-06 25_[+1]_53 chr1:36397784-36398284 3.8e-06 38_[-1]_40 chr3:182212315-182212815 5e-06 29_[+1]_49 chr10:1498786-1499286 6.1e-06 61_[-1]_17 chr7:36128896-36129396 6.5e-06 36_[-1]_42 chr1:30807363-30807863 7.8e-06 15_[-1]_63 chr10:132329852-13233035 8.9e-06 23_[-1]_55 chr10:75358958-75359458 9.4e-06 28_[-1]_50 chr20:63339255-63339755 1.1e-05 69_[+1]_9 chr1:155244577-155245077 2.3e-05 52_[+1]_26 chr12:125064920-12506542 4.3e-05 3_[+1]_75 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGAATGAATGAATGAATGA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GAATGAATGAATGAATGAATGA width=22 seqs=182 chr1:40476819-40477319 ( 9) GAATGAATGAATGAATGAATGA 1 chr6:44265549-44266049 ( 19) GAATGAATGAATGAATGAATGA 1 chr6:28942009-28942509 ( 42) GAATGAATGAATGAATGAATGA 1 chr20:49713990-49714490 ( 60) GAATGAATGAATGAATGAATGA 1 chr19:49158344-49158844 ( 42) GAATGAATGAATGAATGAATGA 1 chr19:1267230-1267730 ( 42) GAATGAATGAATGAATGAATGA 1 chr16:22948800-22949300 ( 46) GAATGAATGAATGAATGAATGA 1 chr12:65630573-65631073 ( 58) GAATGAATGAATGAATGAATGA 1 chr20:50113559-50114059 ( 10) GAATGAATGAATGAATGAATGA 1 chr1:223714047-223714547 ( 58) GAATGAATGAATGAATGAATGA 1 chr6:36874233-36874733 ( 19) GAATGAATGAATGAATGAATGA 1 chr14:23352889-23353389 ( 51) GAATGAATGAATGAATGAATGA 1 chr6:10414233-10414733 ( 32) GAATGAATGAATGAATGAATGA 1 chr14:99192665-99193165 ( 6) GAATGAATGAATGAATGAATGA 1 chr1:85062554-85063054 ( 54) GAATGAATGAATGAATGAATGA 1 chr15:78317419-78317919 ( 3) GAATGAATGAATGAATGAATGA 1 chr3:185283243-185283743 ( 32) GAATGAATGAATGAATGAATGA 1 chr12:13099906-13100406 ( 29) GAATGAATGAATGAATGAATGA 1 chr13:42110329-42110829 ( 59) GAATGAATGAATGAATGAATGA 1 chr12:116278171-11627867 ( 60) GAATGAATGAATGAATGAATGA 1 chr19:35774200-35774700 ( 14) GAATGAATGAATGAATGAATGA 1 chr20:46021234-46021734 ( 6) GAATGAATGAATGAATGAATGA 1 chr20:50284442-50284942 ( 14) GAATGAATGAATGAATGAATGA 1 chr19:10087593-10088093 ( 28) GAATGAATGAATGAATGAATGA 1 chr9:136980634-136981134 ( 36) GAATGAATGAATGAATGAATGA 1 chr1:227897683-227898183 ( 52) GAATGAATGAATGAATGAATGA 1 chr17:17742212-17742712 ( 5) GAATGAATGAATGAATGAATGA 1 chr12:52926707-52927207 ( 31) GAATGAATGAATGAATGAATGA 1 chr19:8367520-8368020 ( 78) GAATGAATGAATGAATGAATGA 1 chr10:132942674-13294317 ( 36) GAATGAATGAATGAATGAATGA 1 chr17:45383887-45384387 ( 45) GAATGAATGAATGAATGAATGA 1 chr9:133734153-133734653 ( 52) GAATGAATGAATGAATGAGTGA 1 chr17:36825034-36825534 ( 40) GAATGAATGAATGAATGAGTGA 1 chr7:66075178-66075678 ( 37) GAATGAATGAATGAATGAGTGA 1 chr1:18602351-18602851 ( 51) GAATGAATGAGTGAATGAATGA 1 chr1:22271812-22272312 ( 57) GAATGAATGAGTGAATGAATGA 1 chr11:117907617-11790811 ( 78) GAGTGAATGAATGAATGAATGA 1 chr12:89526225-89526725 ( 67) GAATGAATGAGTGAATGAATGA 1 chr17:79914967-79915467 ( 26) GAATGAATGAGTGAATGAATGA 1 chr4:152536433-152536933 ( 73) GAATGAATGAATGAATGAATGC 1 chr1:36384487-36384987 ( 9) AAATGAATGAATGAATGAATGA 1 chr19:4815149-4815649 ( 76) GAATGAATGAATGAGTGAATGA 1 chr2:173414948-173415448 ( 34) GAATGAATGAATGAATGAATGT 1 chr7:101547512-101548012 ( 59) GAATGAATGAATGAACGAATGA 1 chr19:1039428-1039928 ( 37) GAATGAATGAATGAACGAATGA 1 chr6:30646476-30646976 ( 53) GAATGAATGAATGAATGAATGT 1 chr16:778815-779315 ( 22) GAATGAATGAGTGAATGAGTGA 1 chr1:10833914-10834414 ( 12) GAATGAATGAGTGAATGAGTGA 1 chr19:841255-841755 ( 27) GAATGAATGAGTGAATGAGTGA 1 chr21:34844330-34844830 ( 66) GAGTGAATGAATGAATGAGTGA 1 chr20:63543699-63544199 ( 62) GAATGGATGAATGAATGAATGA 1 chr16:23148219-23148719 ( 42) GAATAAATGAATGAATGAATGA 1 chr19:4232522-4233022 ( 46) GAATGAATTAATGAATGAATGA 1 chr3:197298666-197299166 ( 78) GAATGAATGAATGAATGAGCGA 1 chr19:2032438-2032938 ( 65) GATTGAATGAATGAATGAATGA 1 chr12:96061775-96062275 ( 24) GAATGAAGGAATGAATGAGTGA 1 chr2:74147394-74147894 ( 55) GAGTGAATGAATGAATGAAAGA 1 chr6:24359556-24360056 ( 15) AAGTGAATGAATGAATGAATGA 1 chr20:63056827-63057327 ( 69) GAATGAATGAGTGAATGAAGGA 1 chr9:136581066-136581566 ( 41) GAATGAGTGAATGAATGAGTGA 1 chr3:45618045-45618545 ( 18) GAGTGAAGGAATGAATGAATGA 1 chr8:118109177-118109677 ( 48) AAATGAATGAATGAATGAATGC 1 chr4:48016744-48017244 ( 58) GAATGAATGAATGAGTGAACGA 1 chr8:47292665-47293165 ( 22) GAGTGAATGAATGAATGAGTGC 1 chr9:124862029-124862529 ( 26) GAAGGAATGAATGAACGAATGA 1 chr21:43718655-43719155 ( 29) GAATGAATGAATGAACGAACGA 1 chr7:148982884-148983384 ( 49) GAATGAATGTATGAATGAATGA 1 chr10:101818682-10181918 ( 67) GAATGAAGGAATGAACGAATGA 1 chr19:10194953-10195453 ( 38) GAAAGAATGAATGAATGAATGC 1 chr19:4197621-4198121 ( 78) GAATGAATGAACGAGTGAATGA 1 chr8:140464070-140464570 ( 39) CAATGAATGAACGAATGAATGA 1 chr15:70100891-70101391 ( 56) GCATGAATGAATGAATGAATGC 1 chr9:136579540-136580040 ( 1) GAATGAGTGAGTGAATGAGTGA 1 chr22:49942453-49942953 ( 69) GAATGAGTGAGTGAATGAGTGA 1 chr9:136150600-136151100 ( 2) GAGTGAATGAGTGAGTGAATGA 1 chr19:18682942-18683442 ( 62) GAATGAATGAATGCATGAGTGA 1 chr19:1313587-1314087 ( 39) GAAGAAATGAATGAATGAATGA 1 chr6:134111066-134111566 ( 53) GAATGAATGAATGAATGCAGGA 1 chr3:72887617-72888117 ( 77) GAACGAACGAATGAATGAATGA 1 chr7:139778225-139778725 ( 56) GAATGAATGAATGAAGGAGTGG 1 chr2:231037039-231037539 ( 38) GAACAAATGAATGAATGAATGA 1 chr7:128862397-128862897 ( 42) GAGTGAATGAACGAATGAATGC 1 chr17:80980639-80981139 ( 38) GAATGAATGAGTAAATGAGTGA 1 chr19:17482813-17483313 ( 1) GAATGAATGAGGGAATGAGTGA 1 chr1:15799220-15799720 ( 53) GAATGAATGAACAAATGAATGA 1 chr6:20091888-20092388 ( 43) GAATGAACAAATGAATGAATGA 1 chr7:101165591-101166091 ( 3) GAATGAATGAATGAATGAAATG 1 chrX:136496486-136496986 ( 34) GAGCGAATGAATGAACGAATGA 1 chr16:29273505-29274005 ( 20) GAGTGAGTGAGTGAATGAGTGA 1 chr16:88247420-88247920 ( 28) GAGTGAGTGAGTGAATGAGTGA 1 chr1:14742236-14742736 ( 49) GAATGAAGGAATGAGCGAATGA 1 chr2:230864448-230864948 ( 42) GAATGAATGAGTGAGCGAGTGA 1 chr11:1201699-1202199 ( 77) GAGAGAATGAGTGAATGAGTGA 1 chr15:74790435-74790935 ( 76) GAATGAATGAACGAATGAAAAA 1 chr3:14603191-14603691 ( 18) GAATAAGTGAGTGAATGAATGA 1 chr5:1034969-1035469 ( 39) TAATGAATGAGTGAACGAGTGA 1 chr9:132990075-132990575 ( 52) GAGTGAACAAATGAATGAATGA 1 chrX:136251459-136251959 ( 47) AAATGAATGAATGAATGAGGAA 1 chr1:17011059-17011559 ( 33) GGCTGAATGAATGAATGAATGG 1 chr17:8631441-8631941 ( 79) GACTGAACGAGTGAATGAATGA 1 chr19:55118233-55118733 ( 50) GAATGAATGAATGAATGGGTTC 1 chr1:109901822-109902322 ( 18) GAATGGATGAATGCATGAGTGA 1 chr19:30069387-30069887 ( 24) GAAGGAATGAAGGAAGGAATGA 1 chr1:1308062-1308562 ( 66) GAATGAATGAGCGAGTGAACGA 1 chr3:45509072-45509572 ( 47) GAGTGAATGAATGAGTGAACAA 1 chr1:41870060-41870560 ( 11) CAGTGAATGAGTGAATGAGTCA 1 chr19:45424003-45424503 ( 4) GAATAAATGAATGAATGAGGAA 1 chr19:40549391-40549891 ( 19) GAGTGAATAAATAAATGAGTGA 1 chr19:29810997-29811497 ( 67) GAATGAATGAATGAACGACCCA 1 chr21:36420053-36420553 ( 77) GAATGAATGAATGAACAAAGGC 1 chr16:4615746-4616246 ( 3) CAGTGAATGAATGAATGAGCCA 1 chr6:2998453-2998953 ( 51) AAATGAACGAATGAATGAACCA 1 chr7:2314679-2315179 ( 25) GAGTGGATGAATGAATGTAGGA 1 chr6:6004559-6005059 ( 67) GAACGAATGAATGAACGGATGG 1 chr7:2314881-2315381 ( 3) GAGTGGATGAATGAATGTAGGA 1 chr10:124355060-12435556 ( 43) GAATGAATGAATGAACTGATGC 1 chr2:238240121-238240621 ( 63) GAATGAATTAATGGGTGAATGA 1 chr20:41003175-41003675 ( 49) AAACGAATGAATGAATGAGAAA 1 chr7:98686547-98687047 ( 77) AAATGAATGAACGAGTAAATGA 1 chr16:1308283-1308783 ( 6) GAATGAATGAGTAAGTGAGGGA 1 chr6:49550540-49551040 ( 39) CAAAGAAGGAACGAATGAATGA 1 chr15:74781508-74782008 ( 46) TGGTGAATGAATGAATGAAGGC 1 chr22:37677206-37677706 ( 33) GAGCCAGTGAATGAATGAATGA 1 chr16:84618782-84619282 ( 79) GAATGAGTCAGTGAAGGAATGA 1 chr19:13758313-13758813 ( 67) AAATGAATTAACGAATAAATGA 1 chr12:93442112-93442612 ( 10) GAACGAACGCGTGAATGAATGA 1 chr22:20496077-20496577 ( 62) GAGGGAGTGAATGAGTGAGGGA 1 chr2:27719851-27720351 ( 1) GAATGAATGAGTGAGTGTGAGC 1 chr19:3500826-3501326 ( 27) ACATGAATGAATGAACGACTGC 1 chr7:656950-657450 ( 13) GAATGGATGCATGAGTGAATGT 1 chrX:153333629-153334129 ( 50) GAAGGAAGGAACGAAGGAATGG 1 chr15:74196073-74196573 ( 1) TATGGAATGAATGAATGAAGGG 1 chr10:116826808-11682730 ( 51) GAATGAATCACTGAATTAATGA 1 chr1:200890670-200891170 ( 60) AAGTGAATGAATGGATGAACGG 1 chr5:73394047-73394547 ( 30) GAGTGAATGAATGCATGGAAGC 1 chr21:25608033-25608533 ( 1) GAATGAATGAATGAATGCCCTT 1 chr6:116680675-116681175 ( 38) TGAAGAATGAATGAATGAGGGG 1 chr1:224873198-224873698 ( 44) AAGAGAATAAATGAATGAGTAA 1 chr4:5037945-5038445 ( 49) AAATGAAAGAATGAATGAACAG 1 chr12:124994092-12499459 ( 10) CGGTGAATGAATGAATGAGACG 1 chr19:47417718-47418218 ( 54) GAATGAATGCATGATTGAGACA 1 chr5:95644278-95644778 ( 67) GAACAAATGAAGGAAGGAAAGA 1 chr16:50806532-50807032 ( 28) AAAGGAATGAATGAATTACAAA 1 chr14:76640829-76641329 ( 36) GAATCAATGAATGAACAGATGG 1 chr6:2985946-2986446 ( 64) GAATGAATGAAACAATTAGTTA 1 chr17:76264673-76265173 ( 39) CAATGAAGTAATGAATGAACTT 1 chr13:46052774-46053274 ( 77) GAACGAATGAATGAGTGGCTCT 1 chr12:6937858-6938358 ( 40) GAAGGAAGGAAAGAGGGAAAGA 1 chr17:77002219-77002719 ( 13) GAATGAATGAATGAACCCAAGT 1 chr12:2057094-2057594 ( 33) GCGTGAATGAATGAATGCGACC 1 chr17:50867402-50867902 ( 29) GAAAGAAGCAATGAATGAAACG 1 chr1:235917364-235917864 ( 68) AAATGAATGAGTCAATGTGGGC 1 chr5:113513310-113513810 ( 1) GCAGGAATTAATGAAGGACTAA 1 chr1:156444383-156444883 ( 76) GAATCAGTGAATAAATGAAACT 1 chr8:99323749-99324249 ( 47) GGGTGAAGTAATGAATGCAGGC 1 chr6:35044916-35045416 ( 19) CACTCAGGGAATGAATGAATTA 1 chr6:167839254-167839754 ( 53) AGATGAAGGAATGAAGTAATCT 1 chr19:34364609-34365109 ( 50) TGTCGAATGAATGAATGAAGCC 1 chr12:114662474-11466297 ( 10) TAATTGCTGAATAAATGAATGA 1 chr1:65254894-65255394 ( 60) AAATTGTGGAATGAATGAATGG 1 chr16:31072987-31073487 ( 24) AGATGAACAAATGAATGGACGG 1 chr9:37415230-37415730 ( 40) CGTTAAATAAACGAATGAGTGA 1 chr16:31700186-31700686 ( 33) GCCTGAATGAATGATTGTCTGC 1 chr19:33304587-33305087 ( 22) CATTTGATGAATGAATGAAGTC 1 chr19:40219784-40220284 ( 77) TAGTTGTTGAATGAATGAGTGT 1 chr2:231677640-231678140 ( 23) GAATGAATGAATGAGGAGGGTT 1 chr20:20212561-20213061 ( 43) TACTGACTGAATGAATGACATC 1 chr20:362562-363062 ( 78) CCAGGAATGAGGGAGTAAGTGA 1 chr12:806436-806936 ( 67) AAGGGAAATAGGGAATGAGTGA 1 chr1:208046403-208046903 ( 30) CATGGAAGAAATGAATGAAATT 1 chr12:12398170-12398670 ( 4) GAAGGAATGTGAGAATGAGCTG 1 chr1:155226948-155227448 ( 26) CGAAGAATGAATGAATTATATA 1 chr1:36397784-36398284 ( 39) TGCGGAATGAATGAACGACTCT 1 chr3:182212315-182212815 ( 30) CCATGAATTAATGAGGTAAACA 1 chr10:1498786-1499286 ( 62) AGAGTAATGAGTGAATGACGAG 1 chr7:36128896-36129396 ( 37) TGATGAAGAAATGAATTTCTGG 1 chr1:30807363-30807863 ( 16) GGAGGAAGAAATGAAGAGATGT 1 chr10:132329852-13233035 ( 24) CAACGTAGGAACGAATGAAGTG 1 chr10:75358958-75359458 ( 29) GAGGGAGTGAGTCAATTAACAC 1 chr20:63339255-63339755 ( 70) AAACAGATGAATGAATTACATC 1 chr1:155244577-155245077 ( 53) GAGAGAGCGAGAGAGCGAGCGA 1 chr12:125064920-12506542 ( 4) TAGCGAATGAATGATGTACACG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGAATGAATGAATGAATGA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 7.61115 E= 1.1e-861 -117 -172 157 -203 184 -272 -172 -1415 161 -294 -48 -291 -249 -182 -144 168 -249 -352 184 -317 193 -1415 -220 -549 188 -452 -182 -449 -449 -252 -144 179 -232 -394 182 -249 198 -394 -1415 -449 172 -552 -48 -1415 -349 -194 -320 184 -291 -394 191 -1415 198 -394 -452 -1415 182 -1415 -120 -390 -1415 -135 -194 176 -268 -552 182 -203 185 -320 -235 -291 143 -182 3 -549 -110 -152 -128 149 -203 -162 163 -168 150 -106 -128 -168 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGAATGAATGAATGAATGA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 182 E= 1.1e-861 0.109890 0.076923 0.752747 0.060440 0.884615 0.038462 0.076923 0.000000 0.752747 0.032967 0.181319 0.032967 0.043956 0.071429 0.093407 0.791209 0.043956 0.021978 0.906593 0.027473 0.939560 0.000000 0.054945 0.005495 0.906593 0.010989 0.071429 0.010989 0.010989 0.043956 0.093407 0.851648 0.049451 0.016484 0.890110 0.043956 0.972527 0.016484 0.000000 0.010989 0.813187 0.005495 0.181319 0.000000 0.021978 0.065934 0.027473 0.884615 0.032967 0.016484 0.950549 0.000000 0.972527 0.016484 0.010989 0.000000 0.873626 0.000000 0.109890 0.016484 0.000000 0.098901 0.065934 0.835165 0.038462 0.005495 0.895604 0.060440 0.890110 0.027473 0.049451 0.032967 0.664835 0.071429 0.258242 0.005495 0.115385 0.087912 0.104396 0.692308 0.060440 0.082418 0.780220 0.076923 0.697802 0.120879 0.104396 0.076923 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GAATGAATGAATGAATGAATGA MEME-1 regular expression -------------------------------------------------------------------------------- GAATGAATGAATGAATGA[AG]TGA -------------------------------------------------------------------------------- Time 358.38 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAATGAATGARTGAA MEME-2 width = 16 sites = 76 llr = 1126 E-value = 6.9e-180 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAATGAATGARTGAA MEME-2 Description -------------------------------------------------------------------------------- Simplified A :187::a7::a6::97 pos.-specific C 1::1::::11:::::: probability G 1711:a:3:9:4:913 matrix T 7111a:::9:::a1:1 bits 2.0 1.8 *** * * 1.6 *** * * * 1.4 *** *** *** Relative 1.2 ******* *** Entropy 1.0 * * *********** (21.4 bits) 0.8 **************** 0.6 **************** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel TGAATGAATGAATGAA consensus G G G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAATGARTGAA MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr1:10833914-10834414 - 47 2.11e-10 AATGAGTGAG TGAATGAATGAATGAA TAAGTAAATG chr1:18602351-18602851 + 26 2.11e-10 catgcatgag tgaatgaatgaatgaa tgcatgagtg chr19:4232522-4233022 + 5 2.11e-10 tgaa tgaatgaatgaatgaa gggatgaatt chr20:50113559-50114059 - 37 2.11e-10 TTTGTTTGGT TGAATGAATGAATGAA CGAATGAATG chr15:78317419-78317919 + 27 2.11e-10 atgaatgaaa tgaatgaatgaatgaa atgaaATAAC chr19:10087593-10088093 + 51 2.11e-10 aatgaatgaa tgaatgaatgaatgaa tgGCTTTGAA chr17:79914967-79915467 - 61 2.11e-10 AATGAATGAG TGAATGAATGAATGAA TTAGTGAATG chr17:17742212-17742712 + 36 2.11e-10 aatgaacgag tgaatgaatgaatgaa taaaggaatg chr10:132942674-13294317 - 59 2.11e-10 ACTGAATGGA TGAATGAATGAATGAA TGAATGAATG chr17:45383887-45384387 - 68 2.11e-10 TCGGTAAATA TGAATGAATGAATGAA CGAATGAATG chr19:4815149-4815649 - 7 4.28e-10 AATGAACGAG TGAATGAATGAGTGAA TGAATG chr16:778815-779315 - 85 4.28e-10 . TGAATGAATGAGTGAA TGAGTGAGTG chr9:133734153-133734653 - 7 4.28e-10 AATGAGTGAA TGAATGAATGAGTGAA TGAATG chr20:63056827-63057327 - 28 4.28e-10 AATAAGTATG TGAATGAATGAGTGAA CAAATGAGTG chr20:63543699-63544199 + 13 4.28e-10 gatgaatgga tgaatgaatgagtgaa ttagtgagtg chr17:36825034-36825534 + 71 4.28e-10 aatgagtgaa tgaatgaatgagtgaa tgagtgaatg chr19:841255-841755 + 62 8.60e-10 AGTGAACGAA TGAATGAGTGAATGAA TCAATGAGTG chr14:99192665-99193165 + 53 8.60e-10 gataaaagag tgaatgaatgaatgag taaattagtg chr9:136579540-136580040 - 56 1.30e-09 AGTGGGTGAG TGAATGAATGAGTGAG TAAATGAGTG chr9:136150600-136151100 + 37 1.30e-09 agtgagtgag tgaatgagtgagtgaa tgagtgagtg chr9:136581066-136581566 - 72 1.30e-09 AATGAGTGAG TGAATGAGTGAGTGAA TGAATGAGGG chr19:49158344-49158844 - 65 2.37e-09 CTTGCATGGA TGGATGAATGAATGAA TGAATGAATG chr19:47417718-47418218 + 85 2.37e-09 ATTTGGCACA tggatgaatgaatgaa chr22:49942453-49942953 + 40 3.67e-09 agtgaacgag tgagtgaatgagtgaa caagtgagtg chr5:1034969-1035469 + 62 4.10e-09 aacgagtgag ttaatgaatgagtgaa caagtgagtg chr16:29273505-29274005 + 58 4.76e-09 aatgactgag tgaatgagtgagtgag tcaatgagtg chr11:1201699-1202199 + 32 4.76e-09 aatgaacaag tgaatgagtgagtgag cgaatgggta chr12:52926707-52927207 + 54 4.76e-09 aatgaatgaa tgaatgaatgaatgaT TCAATTCTAT chr19:17482813-17483313 + 56 7.13e-09 agtgaaggag ggaatgaatgaatgag ggaaggaggg chr7:98686547-98687047 + 20 7.13e-09 ccaacaagag tgaatgaatgaatgga caaaccaaca chr7:101547512-101548012 - 18 9.96e-09 AATAAAAGAA TGAATGAATCAGTGAA TAAACAAATG chr21:34844330-34844830 + 49 9.96e-09 GCTGGACAAA TAAAtgaatgagtgag tgagtgaatg chr16:88247420-88247920 + 70 1.17e-08 actgaatgag tgagtgagtgagtgaa tgagtgagtc chr1:40476819-40477319 + 32 1.44e-08 aatgaatgag tgaatgaatgaatgaC AGGGAAGGCG chr19:40549391-40549891 - 85 1.50e-08 . GGAGTGAATGAATGAA TAGTTAAGTA chr7:101165591-101166091 + 83 2.02e-08 gagaaaagga tgaatgaatgaatggg ag chr9:132990075-132990575 - 19 2.76e-08 AATGAATGAG CAAATGAATGAGTGAA CAAATGAATG chr16:1308283-1308783 + 29 3.10e-08 agtgagggag ggaatgagtgagtgag GGTGGCAATG chr16:23148219-23148719 + 25 3.10e-08 aatacatgtt tgagtgagtgagtgag tgaataaatg chr2:230864448-230864948 + 65 3.10e-08 agcgagtgag tgagtgagtgagtgag cgagcgagtg chr17:80980639-80981139 + 17 4.73e-08 aaagagtggg tgaatgagtcaatgag tgagagaatg chr10:35635417-35635917 + 9 1.03e-07 GCTATTTT tgaatgaatgaattga atgaaggaaC chr11:117907617-11790811 + 58 1.15e-07 AGTGAACAaa tgagtgaatggatgaa tgatgagtga chr7:2314881-2315381 - 74 1.15e-07 AGTGAGTGGC TGGATGAATGAATGCA GGATGCAGTG chr1:22271812-22272312 - 6 1.25e-07 AACGAGTGAG TAAATGAGCGAATGAA GGAGT chr8:118109177-118109677 + 31 1.79e-07 GACATGTACA GAaatgaatgaattaa taaatgaatg chr19:4197621-4198121 + 61 2.33e-07 agtgggtgaa cgaatgaacgagtgag tgaatgaatg chr6:44265549-44266049 - 2 2.33e-07 AATGAATGAG TGAATGAATCAACGAA G chr5:140327468-140327968 + 19 2.55e-07 CCACAAACAT TTGCTGAATGAATGAA GCTGAAATGA chr19:3185110-3185610 - 2 2.77e-07 GCCTATACCA TTTTTGAATGAATGAA T chr19:13758313-13758813 + 22 2.77e-07 attactttaa caaatgaatcagtgaa ccaacaaaca chr1:85062554-85063054 + 37 2.99e-07 caataaaCCA TGAATGAGTCAGTTaa tgaatgaatg chr1:227897683-227898183 + 19 2.99e-07 aatgaacaaa ggaatcaatgagtgaa caaatgattg chr22:20496077-20496577 - 14 3.26e-07 AGGAAGGGAA GGAATGAGAGAGTGAA GGAGGGAGGG chr7:2314679-2315179 - 4 3.57e-07 TAGGATGCAG TGAGTGAGTGGGTGAA TGA chr6:28942009-28942509 + 17 3.83e-07 gcttgttgCa tgaatgcataaatgaa aggatgagtg chr6:138593184-138593684 - 55 4.49e-07 ACTCTCTCTC TGTATGAGTGAATTAG CATGATTGTG chr7:656950-657450 + 36 4.93e-07 agtgaatgtg tggatgggtgaatgaa ggaattgatg chr9:136980634-136981134 - 59 5.76e-07 GGGTGGATGT GTGTTGAATGAATGAA TGAATGAATG chr3:14603191-14603691 + 85 7.77e-07 GATGAGTGCA TAAGTGAGTGAATGGG chr10:99621005-99621505 + 75 1.14e-06 AACCCAACAA GTGTTGAATGAATGAG GTTCCCCGGG chr1:223714047-223714547 - 81 1.22e-06 TTGT CAAATGAGTGAGTAAA TGAATGAATG chr12:107092157-10709265 + 18 1.31e-06 GGAGCCTGCT GTACTGAATGAATGAT TTTTCTCCAT chr7:128862397-128862897 + 17 1.40e-06 TCCAAAGCGC TTGTtgaacgaatgaa ccaaggaacg chr3:72887617-72888117 + 48 1.50e-06 ATGGCATGGG TGTGTGAGTGAATGGG GAAGTAaacg chr1:236604502-236605002 - 62 1.50e-06 GGCTGGATCA CTACTGAATGAATGAT TCTGGCTACG chr17:29149022-29149522 + 84 1.74e-06 aaatgcttat tgatggaataaatGAA T chr22:37677206-37677706 - 79 1.87e-06 GGCAGC CGTCTGAGTGAATGAG AAGTGAAGGA chr16:22948800-22949300 - 17 1.87e-06 AACGAACGAA GGAAGGAATGAACGAA CTCCATGTGG chr10:1498786-1499286 - 4 2.13e-06 TGAGTAATGA GTATTGAGTGAGTGAT TAG chr19:36837962-36838462 - 18 4.35e-06 ATGGGAGCAG TGGATGCGAGAGTGAA ATTGATGCAG chr5:113513310-113513810 + 32 4.91e-06 AACGAAGTAG CAAGTGAGTGAATAAG AAGATGAGGA chr12:52871233-52871733 + 50 5.24e-06 GAAGGGTGTG TGTGTGAACAAGTGAA GTCATTCTCT chr9:124054660-124055160 - 27 6.66e-06 GTTTTTCCCC CAGATGAATGAATGCT ACTGTAGACT chr20:63339255-63339755 + 17 6.66e-06 catatccaca cagatgaaTGAATTAC ATCATATCCA chr5:124740945-124741445 - 81 8.40e-06 AACC TAATTAAATCAATGAG TGTTCTACTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAATGARTGAA MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:10833914-10834414 2.1e-10 46_[-2]_38 chr1:18602351-18602851 2.1e-10 25_[+2]_59 chr19:4232522-4233022 2.1e-10 4_[+2]_80 chr20:50113559-50114059 2.1e-10 36_[-2]_48 chr15:78317419-78317919 2.1e-10 26_[+2]_58 chr19:10087593-10088093 2.1e-10 50_[+2]_34 chr17:79914967-79915467 2.1e-10 60_[-2]_24 chr17:17742212-17742712 2.1e-10 35_[+2]_49 chr10:132942674-13294317 2.1e-10 58_[-2]_26 chr17:45383887-45384387 2.1e-10 67_[-2]_17 chr19:4815149-4815649 4.3e-10 6_[-2]_78 chr16:778815-779315 4.3e-10 84_[-2] chr9:133734153-133734653 4.3e-10 6_[-2]_78 chr20:63056827-63057327 4.3e-10 27_[-2]_57 chr20:63543699-63544199 4.3e-10 12_[+2]_72 chr17:36825034-36825534 4.3e-10 70_[+2]_14 chr19:841255-841755 8.6e-10 61_[+2]_23 chr14:99192665-99193165 8.6e-10 52_[+2]_32 chr9:136579540-136580040 1.3e-09 55_[-2]_29 chr9:136150600-136151100 1.3e-09 36_[+2]_48 chr9:136581066-136581566 1.3e-09 71_[-2]_13 chr19:49158344-49158844 2.4e-09 64_[-2]_20 chr19:47417718-47418218 2.4e-09 84_[+2] chr22:49942453-49942953 3.7e-09 39_[+2]_45 chr5:1034969-1035469 4.1e-09 61_[+2]_23 chr16:29273505-29274005 4.8e-09 57_[+2]_27 chr11:1201699-1202199 4.8e-09 31_[+2]_53 chr12:52926707-52927207 4.8e-09 53_[+2]_31 chr19:17482813-17483313 7.1e-09 55_[+2]_29 chr7:98686547-98687047 7.1e-09 19_[+2]_65 chr7:101547512-101548012 1e-08 17_[-2]_67 chr21:34844330-34844830 1e-08 48_[+2]_36 chr16:88247420-88247920 1.2e-08 69_[+2]_15 chr1:40476819-40477319 1.4e-08 31_[+2]_53 chr19:40549391-40549891 1.5e-08 84_[-2] chr7:101165591-101166091 2e-08 82_[+2]_2 chr9:132990075-132990575 2.8e-08 18_[-2]_66 chr16:1308283-1308783 3.1e-08 28_[+2]_56 chr16:23148219-23148719 3.1e-08 24_[+2]_60 chr2:230864448-230864948 3.1e-08 64_[+2]_20 chr17:80980639-80981139 4.7e-08 16_[+2]_68 chr10:35635417-35635917 1e-07 8_[+2]_76 chr11:117907617-11790811 1.2e-07 57_[+2]_27 chr7:2314881-2315381 1.2e-07 73_[-2]_11 chr1:22271812-22272312 1.3e-07 5_[-2]_79 chr8:118109177-118109677 1.8e-07 30_[+2]_54 chr19:4197621-4198121 2.3e-07 60_[+2]_24 chr6:44265549-44266049 2.3e-07 1_[-2]_83 chr5:140327468-140327968 2.6e-07 18_[+2]_66 chr19:3185110-3185610 2.8e-07 1_[-2]_83 chr19:13758313-13758813 2.8e-07 21_[+2]_63 chr1:85062554-85063054 3e-07 36_[+2]_48 chr1:227897683-227898183 3e-07 18_[+2]_66 chr22:20496077-20496577 3.3e-07 13_[-2]_71 chr7:2314679-2315179 3.6e-07 3_[-2]_81 chr6:28942009-28942509 3.8e-07 16_[+2]_68 chr6:138593184-138593684 4.5e-07 54_[-2]_30 chr7:656950-657450 4.9e-07 35_[+2]_49 chr9:136980634-136981134 5.8e-07 58_[-2]_26 chr3:14603191-14603691 7.8e-07 84_[+2] chr10:99621005-99621505 1.1e-06 74_[+2]_10 chr1:223714047-223714547 1.2e-06 80_[-2]_4 chr12:107092157-10709265 1.3e-06 17_[+2]_67 chr7:128862397-128862897 1.4e-06 16_[+2]_68 chr3:72887617-72888117 1.5e-06 47_[+2]_37 chr1:236604502-236605002 1.5e-06 61_[-2]_23 chr17:29149022-29149522 1.7e-06 83_[+2]_1 chr22:37677206-37677706 1.9e-06 78_[-2]_6 chr16:22948800-22949300 1.9e-06 16_[-2]_68 chr10:1498786-1499286 2.1e-06 3_[-2]_81 chr19:36837962-36838462 4.3e-06 17_[-2]_67 chr5:113513310-113513810 4.9e-06 31_[+2]_53 chr12:52871233-52871733 5.2e-06 49_[+2]_35 chr9:124054660-124055160 6.7e-06 26_[-2]_58 chr20:63339255-63339755 6.7e-06 16_[+2]_68 chr5:124740945-124741445 8.4e-06 80_[-2]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAATGARTGAA MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAATGAATGARTGAA width=16 seqs=76 chr1:10833914-10834414 ( 47) TGAATGAATGAATGAA 1 chr1:18602351-18602851 ( 26) TGAATGAATGAATGAA 1 chr19:4232522-4233022 ( 5) TGAATGAATGAATGAA 1 chr20:50113559-50114059 ( 37) TGAATGAATGAATGAA 1 chr15:78317419-78317919 ( 27) TGAATGAATGAATGAA 1 chr19:10087593-10088093 ( 51) TGAATGAATGAATGAA 1 chr17:79914967-79915467 ( 61) TGAATGAATGAATGAA 1 chr17:17742212-17742712 ( 36) TGAATGAATGAATGAA 1 chr10:132942674-13294317 ( 59) TGAATGAATGAATGAA 1 chr17:45383887-45384387 ( 68) TGAATGAATGAATGAA 1 chr19:4815149-4815649 ( 7) TGAATGAATGAGTGAA 1 chr16:778815-779315 ( 85) TGAATGAATGAGTGAA 1 chr9:133734153-133734653 ( 7) TGAATGAATGAGTGAA 1 chr20:63056827-63057327 ( 28) TGAATGAATGAGTGAA 1 chr20:63543699-63544199 ( 13) TGAATGAATGAGTGAA 1 chr17:36825034-36825534 ( 71) TGAATGAATGAGTGAA 1 chr19:841255-841755 ( 62) TGAATGAGTGAATGAA 1 chr14:99192665-99193165 ( 53) TGAATGAATGAATGAG 1 chr9:136579540-136580040 ( 56) TGAATGAATGAGTGAG 1 chr9:136150600-136151100 ( 37) TGAATGAGTGAGTGAA 1 chr9:136581066-136581566 ( 72) TGAATGAGTGAGTGAA 1 chr19:49158344-49158844 ( 65) TGGATGAATGAATGAA 1 chr19:47417718-47418218 ( 85) TGGATGAATGAATGAA 1 chr22:49942453-49942953 ( 40) TGAGTGAATGAGTGAA 1 chr5:1034969-1035469 ( 62) TTAATGAATGAGTGAA 1 chr16:29273505-29274005 ( 58) TGAATGAGTGAGTGAG 1 chr11:1201699-1202199 ( 32) TGAATGAGTGAGTGAG 1 chr12:52926707-52927207 ( 54) TGAATGAATGAATGAT 1 chr19:17482813-17483313 ( 56) GGAATGAATGAATGAG 1 chr7:98686547-98687047 ( 20) TGAATGAATGAATGGA 1 chr7:101547512-101548012 ( 18) TGAATGAATCAGTGAA 1 chr21:34844330-34844830 ( 49) TAAATGAATGAGTGAG 1 chr16:88247420-88247920 ( 70) TGAGTGAGTGAGTGAA 1 chr1:40476819-40477319 ( 32) TGAATGAATGAATGAC 1 chr19:40549391-40549891 ( 85) GGAGTGAATGAATGAA 1 chr7:101165591-101166091 ( 83) TGAATGAATGAATGGG 1 chr9:132990075-132990575 ( 19) CAAATGAATGAGTGAA 1 chr16:1308283-1308783 ( 29) GGAATGAGTGAGTGAG 1 chr16:23148219-23148719 ( 25) TGAGTGAGTGAGTGAG 1 chr2:230864448-230864948 ( 65) TGAGTGAGTGAGTGAG 1 chr17:80980639-80981139 ( 17) TGAATGAGTCAATGAG 1 chr10:35635417-35635917 ( 9) TGAATGAATGAATTGA 1 chr11:117907617-11790811 ( 58) TGAGTGAATGGATGAA 1 chr7:2314881-2315381 ( 74) TGGATGAATGAATGCA 1 chr1:22271812-22272312 ( 6) TAAATGAGCGAATGAA 1 chr8:118109177-118109677 ( 31) GAAATGAATGAATTAA 1 chr19:4197621-4198121 ( 61) CGAATGAACGAGTGAG 1 chr6:44265549-44266049 ( 2) TGAATGAATCAACGAA 1 chr5:140327468-140327968 ( 19) TTGCTGAATGAATGAA 1 chr19:3185110-3185610 ( 2) TTTTTGAATGAATGAA 1 chr19:13758313-13758813 ( 22) CAAATGAATCAGTGAA 1 chr1:85062554-85063054 ( 37) TGAATGAGTCAGTTAA 1 chr1:227897683-227898183 ( 19) GGAATCAATGAGTGAA 1 chr22:20496077-20496577 ( 14) GGAATGAGAGAGTGAA 1 chr7:2314679-2315179 ( 4) TGAGTGAGTGGGTGAA 1 chr6:28942009-28942509 ( 17) TGAATGCATAAATGAA 1 chr6:138593184-138593684 ( 55) TGTATGAGTGAATTAG 1 chr7:656950-657450 ( 36) TGGATGGGTGAATGAA 1 chr9:136980634-136981134 ( 59) GTGTTGAATGAATGAA 1 chr3:14603191-14603691 ( 85) TAAGTGAGTGAATGGG 1 chr10:99621005-99621505 ( 75) GTGTTGAATGAATGAG 1 chr1:223714047-223714547 ( 81) CAAATGAGTGAGTAAA 1 chr12:107092157-10709265 ( 18) GTACTGAATGAATGAT 1 chr7:128862397-128862897 ( 17) TTGTTGAACGAATGAA 1 chr3:72887617-72888117 ( 48) TGTGTGAGTGAATGGG 1 chr1:236604502-236605002 ( 62) CTACTGAATGAATGAT 1 chr17:29149022-29149522 ( 84) TGATGGAATAAATGAA 1 chr22:37677206-37677706 ( 79) CGTCTGAGTGAATGAG 1 chr16:22948800-22949300 ( 17) GGAAGGAATGAACGAA 1 chr10:1498786-1499286 ( 4) GTATTGAGTGAGTGAT 1 chr19:36837962-36838462 ( 18) TGGATGCGAGAGTGAA 1 chr5:113513310-113513810 ( 32) CAAGTGAGTGAATAAG 1 chr12:52871233-52871733 ( 50) TGTGTGAACAAGTGAA 1 chr9:124054660-124055160 ( 27) CAGATGAATGAATGCT 1 chr20:63339255-63339755 ( 17) CAGATGAATGAATTAC 1 chr5:124740945-124741445 ( 81) TAATTAAATCAATGAG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAATGARTGAA MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 11.2046 E= 6.9e-180 -1289 -109 -80 158 -77 -1289 154 -106 168 -1289 -80 -191 152 -226 -80 -142 -1289 -1289 -326 198 -423 -426 194 -1289 196 -326 -426 -1289 150 -1289 26 -1289 -323 -226 -1289 190 -265 -168 180 -1289 198 -1289 -326 -1289 129 -1289 64 -1289 -1289 -326 -1289 198 -323 -1289 184 -191 188 -326 -194 -1289 141 -326 -2 -191 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAATGARTGAA MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 76 E= 6.9e-180 0.000000 0.118421 0.144737 0.736842 0.144737 0.000000 0.736842 0.118421 0.789474 0.000000 0.144737 0.065789 0.710526 0.052632 0.144737 0.092105 0.000000 0.000000 0.026316 0.973684 0.013158 0.013158 0.973684 0.000000 0.960526 0.026316 0.013158 0.000000 0.697368 0.000000 0.302632 0.000000 0.026316 0.052632 0.000000 0.921053 0.039474 0.078947 0.881579 0.000000 0.973684 0.000000 0.026316 0.000000 0.605263 0.000000 0.394737 0.000000 0.000000 0.026316 0.000000 0.973684 0.026316 0.000000 0.907895 0.065789 0.907895 0.026316 0.065789 0.000000 0.657895 0.026316 0.250000 0.065789 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAATGAATGARTGAA MEME-2 regular expression -------------------------------------------------------------------------------- TGAATGA[AG]TGA[AG]TGA[AG] -------------------------------------------------------------------------------- Time 672.74 secs. ******************************************************************************** ******************************************************************************** MOTIF CAYTCATTCAYT MEME-3 width = 12 sites = 51 llr = 619 E-value = 5.3e-051 ******************************************************************************** -------------------------------------------------------------------------------- Motif CAYTCATTCAYT MEME-3 Description -------------------------------------------------------------------------------- Simplified A :a::19::19:1 pos.-specific C 9:3:9:2:8:61 probability G :::::1:::::: matrix T 1:7a::8a1:49 bits 2.0 * * 1.8 * * * 1.6 ** * * * 1.4 ** * * * * * Relative 1.2 ** ******* * Entropy 1.0 ************ (17.5 bits) 0.8 ************ 0.6 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel CATTCATTCACT consensus C C T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYTCATTCAYT MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr19:4815149-4815649 + 41 5.68e-08 ttctttcact cattcattcact gactcgttca chr9:136579540-136580040 + 34 5.68e-08 ctccttcgct cattcattcact cactcattta chr9:133734153-133734653 + 33 5.68e-08 ttcactcatt cattcattcact cattcattca chr1:18602351-18602851 - 4 5.68e-08 CTCATGCATG CATTCATTCACT ATG chr19:841255-841755 - 88 5.68e-08 T CATTCATTCACT CACTCATTGA chr13:35499042-35499542 - 9 5.68e-08 TCAACACTAG CATTCATTCACT ATGGGAGT chr14:99192665-99193165 - 31 5.68e-08 CTCTTTTATC CATTCATTCACT CATTCATTCA chr17:36825034-36825534 - 89 5.68e-08 . CATTCATTCACT CATTCACTCA chr19:17482813-17483313 - 82 1.12e-07 ATTCCCT CATTCATTCATT CCCTCCTTCC chr19:4232522-4233022 - 31 1.12e-07 TTCATTCCTT CATTCATTCATT AATTCATCCC chr7:101547512-101548012 + 88 1.12e-07 ttcatttgtc cattcattcatt c chr9:136150600-136151100 - 59 1.70e-07 CTCATTCACT CACTCATTCACT CACTCATTCA chr16:88247420-88247920 - 13 1.70e-07 CTCACTCATC CACTCATTCACT CTCACTCATT chr5:1034969-1035469 - 4 2.27e-07 CTCATTAACT CACTCATTCATT AAC chr10:1498786-1499286 + 31 2.27e-07 cattactcaa cactcattcatt actcatcatt chr1:10833914-10834414 + 77 2.85e-07 ctcattcacc cattcactcact cattcaccta chr22:49942453-49942953 - 10 2.85e-07 CTCAATTACT CATTCACTCACT CACTCGTTC chr9:136581066-136581566 + 14 2.85e-07 ctcatttgct cattcactcact cactcatttg chr16:778815-779315 + 61 3.42e-07 catttttact cattcactcatt ttcactcact chr7:2314679-2315179 + 86 4.02e-07 tccagccact cactcactcact gca chr7:2314881-2315381 + 56 4.02e-07 ttcatccagc cactcactcact gcatcctgca chr16:29273505-29274005 - 76 5.18e-07 CTCACTGACT CACTCACTCATT GACTCACTCA chr12:124940110-12494061 + 20 6.85e-07 TGCAACTGAC CATTCATTAACT CCTGAGGGCC chr7:98686547-98687047 - 46 6.85e-07 TTTGTTCACT CATTCGTTCATT TGTTGGTTTG chr6:138593184-138593684 + 37 1.08e-06 GCACAGAGTT CATTCATTCACA ATCATGCTAA chr11:128522470-12852297 + 89 1.08e-06 GCGTGTACAT CATTCATTCACA chr1:22271812-22272312 + 24 1.08e-06 ctcatttact cactcgttcact aatttcttca chr7:101165591-101166091 - 48 1.58e-06 GTCCCTCCTT CATTCATTCATA GCCCCCCGCC chr19:4197621-4198121 - 43 1.58e-06 TTCGTTCACC CACTCGTTCATT CCTTCACTCA chr20:63543699-63544199 - 42 1.58e-06 TCATCTCATT CACTCGTTCATT CCTCACTCAC chr11:113014266-11301476 - 44 1.58e-06 TTTACGGCAG CATTCATTCATC TTAAAGAAAT chr3:14603191-14603691 - 3 1.58e-06 CTTATTCACA TATTCATTCATT CA chr11:1201699-1202199 - 6 1.58e-06 TTCATTCACC CACTCATTTACT CATTC chr17:79914967-79915467 + 79 1.58e-06 ttcattcact cattcattcatC CACCATACGT chr20:57266565-57267065 + 2 1.70e-06 T CATTCATTCCCT CTAGAGCGCt chr19:40549391-40549891 + 63 2.09e-06 ttctttcctc cactcatttatt tacttaacta chr17:17742212-17742712 - 54 2.38e-06 CTCTGGAGAA CATTCATTCCTT TATTCATTCA chr16:1308283-1308783 - 51 3.01e-06 CTCCCTCACT TACTCATTCATT GCCACCCTCA chr17:80980639-80981139 - 79 3.41e-06 TTCACCTGCT CATTAACTCACT CCCTCCGTCC chr7:656950-657450 - 66 3.41e-06 TCCATCCATG CACACATTCACT CATGCATCAA chr20:63056827-63057327 + 2 5.13e-06 t cactcaatcatt tacacactca chr6:27672106-27672606 - 81 5.59e-06 TTAGCTTT CATTAGTTCACT AGGATAGAAA chr7:80883577-80884077 + 58 6.34e-06 GCAGTCATAC CATTAATTAACT CATAATTCAC chr1:65254894-65255394 + 48 6.34e-06 CACAGCCAAT CACTGACTCACT CCattcattc chr9:132990075-132990575 + 85 7.19e-06 tttgctcatt catttgttcact catt chr2:230864448-230864948 - 83 7.19e-06 CACAGT CACTCACTCGCT CGCTCACTCA chr15:70494070-70494570 + 1 8.76e-06 . cattgatttact gcttgaggtc chr20:49713990-49714490 + 89 1.03e-05 ttcaattcaC CATTtatttatt chr6:44265549-44266049 + 67 1.18e-05 TCCTTCACTC CATTCATTAGTT CCACGCATGT chr6:108295594-108296094 - 2 1.64e-05 TTACTCAGAA TATACATTCATT C chr14:23352889-23353389 + 76 2.16e-05 TTCattcacc cattcactaatc agtaaaattt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYTCATTCAYT MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:4815149-4815649 5.7e-08 40_[+3]_48 chr9:136579540-136580040 5.7e-08 33_[+3]_55 chr9:133734153-133734653 5.7e-08 32_[+3]_56 chr1:18602351-18602851 5.7e-08 3_[-3]_85 chr19:841255-841755 5.7e-08 87_[-3]_1 chr13:35499042-35499542 5.7e-08 8_[-3]_80 chr14:99192665-99193165 5.7e-08 30_[-3]_58 chr17:36825034-36825534 5.7e-08 88_[-3] chr19:17482813-17483313 1.1e-07 81_[-3]_7 chr19:4232522-4233022 1.1e-07 30_[-3]_58 chr7:101547512-101548012 1.1e-07 87_[+3]_1 chr9:136150600-136151100 1.7e-07 58_[-3]_30 chr16:88247420-88247920 1.7e-07 12_[-3]_76 chr5:1034969-1035469 2.3e-07 3_[-3]_85 chr10:1498786-1499286 2.3e-07 30_[+3]_58 chr1:10833914-10834414 2.9e-07 76_[+3]_12 chr22:49942453-49942953 2.9e-07 9_[-3]_79 chr9:136581066-136581566 2.9e-07 13_[+3]_75 chr16:778815-779315 3.4e-07 60_[+3]_28 chr7:2314679-2315179 4e-07 85_[+3]_3 chr7:2314881-2315381 4e-07 55_[+3]_33 chr16:29273505-29274005 5.2e-07 75_[-3]_13 chr12:124940110-12494061 6.9e-07 19_[+3]_69 chr7:98686547-98687047 6.9e-07 45_[-3]_43 chr6:138593184-138593684 1.1e-06 36_[+3]_52 chr11:128522470-12852297 1.1e-06 88_[+3] chr1:22271812-22272312 1.1e-06 23_[+3]_65 chr7:101165591-101166091 1.6e-06 47_[-3]_41 chr19:4197621-4198121 1.6e-06 42_[-3]_46 chr20:63543699-63544199 1.6e-06 41_[-3]_47 chr11:113014266-11301476 1.6e-06 43_[-3]_45 chr3:14603191-14603691 1.6e-06 2_[-3]_86 chr11:1201699-1202199 1.6e-06 5_[-3]_83 chr17:79914967-79915467 1.6e-06 78_[+3]_10 chr20:57266565-57267065 1.7e-06 1_[+3]_87 chr19:40549391-40549891 2.1e-06 62_[+3]_26 chr17:17742212-17742712 2.4e-06 53_[-3]_35 chr16:1308283-1308783 3e-06 50_[-3]_38 chr17:80980639-80981139 3.4e-06 78_[-3]_10 chr7:656950-657450 3.4e-06 65_[-3]_23 chr20:63056827-63057327 5.1e-06 1_[+3]_87 chr6:27672106-27672606 5.6e-06 80_[-3]_8 chr7:80883577-80884077 6.3e-06 57_[+3]_31 chr1:65254894-65255394 6.3e-06 47_[+3]_41 chr9:132990075-132990575 7.2e-06 84_[+3]_4 chr2:230864448-230864948 7.2e-06 82_[-3]_6 chr15:70494070-70494570 8.8e-06 [+3]_88 chr20:49713990-49714490 1e-05 88_[+3] chr6:44265549-44266049 1.2e-05 66_[+3]_22 chr6:108295594-108296094 1.6e-05 1_[-3]_87 chr14:23352889-23353389 2.2e-05 75_[+3]_13 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYTCATTCAYT MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CAYTCATTCAYT width=12 seqs=51 chr19:4815149-4815649 ( 41) CATTCATTCACT 1 chr9:136579540-136580040 ( 34) CATTCATTCACT 1 chr9:133734153-133734653 ( 33) CATTCATTCACT 1 chr1:18602351-18602851 ( 4) CATTCATTCACT 1 chr19:841255-841755 ( 88) CATTCATTCACT 1 chr13:35499042-35499542 ( 9) CATTCATTCACT 1 chr14:99192665-99193165 ( 31) CATTCATTCACT 1 chr17:36825034-36825534 ( 89) CATTCATTCACT 1 chr19:17482813-17483313 ( 82) CATTCATTCATT 1 chr19:4232522-4233022 ( 31) CATTCATTCATT 1 chr7:101547512-101548012 ( 88) CATTCATTCATT 1 chr9:136150600-136151100 ( 59) CACTCATTCACT 1 chr16:88247420-88247920 ( 13) CACTCATTCACT 1 chr5:1034969-1035469 ( 4) CACTCATTCATT 1 chr10:1498786-1499286 ( 31) CACTCATTCATT 1 chr1:10833914-10834414 ( 77) CATTCACTCACT 1 chr22:49942453-49942953 ( 10) CATTCACTCACT 1 chr9:136581066-136581566 ( 14) CATTCACTCACT 1 chr16:778815-779315 ( 61) CATTCACTCATT 1 chr7:2314679-2315179 ( 86) CACTCACTCACT 1 chr7:2314881-2315381 ( 56) CACTCACTCACT 1 chr16:29273505-29274005 ( 76) CACTCACTCATT 1 chr12:124940110-12494061 ( 20) CATTCATTAACT 1 chr7:98686547-98687047 ( 46) CATTCGTTCATT 1 chr6:138593184-138593684 ( 37) CATTCATTCACA 1 chr11:128522470-12852297 ( 89) CATTCATTCACA 1 chr1:22271812-22272312 ( 24) CACTCGTTCACT 1 chr7:101165591-101166091 ( 48) CATTCATTCATA 1 chr19:4197621-4198121 ( 43) CACTCGTTCATT 1 chr20:63543699-63544199 ( 42) CACTCGTTCATT 1 chr11:113014266-11301476 ( 44) CATTCATTCATC 1 chr3:14603191-14603691 ( 3) TATTCATTCATT 1 chr11:1201699-1202199 ( 6) CACTCATTTACT 1 chr17:79914967-79915467 ( 79) CATTCATTCATC 1 chr20:57266565-57267065 ( 2) CATTCATTCCCT 1 chr19:40549391-40549891 ( 63) CACTCATTTATT 1 chr17:17742212-17742712 ( 54) CATTCATTCCTT 1 chr16:1308283-1308783 ( 51) TACTCATTCATT 1 chr17:80980639-80981139 ( 79) CATTAACTCACT 1 chr7:656950-657450 ( 66) CACACATTCACT 1 chr20:63056827-63057327 ( 2) CACTCAATCATT 1 chr6:27672106-27672606 ( 81) CATTAGTTCACT 1 chr7:80883577-80884077 ( 58) CATTAATTAACT 1 chr1:65254894-65255394 ( 48) CACTGACTCACT 1 chr9:132990075-132990575 ( 85) CATTTGTTCACT 1 chr2:230864448-230864948 ( 83) CACTCACTCGCT 1 chr15:70494070-70494570 ( 1) CATTGATTTACT 1 chr20:49713990-49714490 ( 89) CATTTATTTATT 1 chr6:44265549-44266049 ( 67) CATTCATTAGTT 1 chr6:108295594-108296094 ( 2) TATACATTCATT 1 chr14:23352889-23353389 ( 76) CATTCACTAATC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYTCATTCAYT MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 11.651 E= 5.3e-051 -1232 190 -1232 -207 202 -1232 -1232 -1232 -1232 40 -1232 143 -265 -1232 -1232 196 -207 177 -269 -265 184 -1232 -110 -1232 -365 -23 -1232 163 -1232 -1232 -1232 202 -165 174 -1232 -165 190 -269 -269 -1232 -1232 117 -1232 80 -207 -210 -1232 184 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYTCATTCAYT MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 51 E= 5.3e-051 0.000000 0.941176 0.000000 0.058824 1.000000 0.000000 0.000000 0.000000 0.000000 0.333333 0.000000 0.666667 0.039216 0.000000 0.000000 0.960784 0.058824 0.862745 0.039216 0.039216 0.882353 0.000000 0.117647 0.000000 0.019608 0.215686 0.000000 0.764706 0.000000 0.000000 0.000000 1.000000 0.078431 0.843137 0.000000 0.078431 0.921569 0.039216 0.039216 0.000000 0.000000 0.568627 0.000000 0.431373 0.058824 0.058824 0.000000 0.882353 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CAYTCATTCAYT MEME-3 regular expression -------------------------------------------------------------------------------- CA[TC]TCA[TC]TCA[CT]T -------------------------------------------------------------------------------- Time 955.70 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAABRARTGAW MEME-4 width = 12 sites = 105 llr = 962 E-value = 1.8e-027 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAABRARTGAW MEME-4 Description -------------------------------------------------------------------------------- Simplified A :1a8:596:195 pos.-specific C ::::3::21::: probability G 39:234:3:9:1 matrix T 7:::41::9::3 bits 2.0 1.8 * 1.6 * * * 1.4 ** * *** Relative 1.2 *** * *** Entropy 1.0 *** * *** (13.2 bits) 0.8 **** * *** 0.6 **** ****** 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel TGAATAAATGAA consensus G GG G T sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAABRARTGAW MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr19:4815149-4815649 - 59 5.41e-08 AATGAGTGAG TGAATAAATGAA CGAGTCAGTG chr7:101547512-101548012 - 46 5.41e-08 AACGAATGAA TGAATAAATGAA TGAATAAAAG chr19:4232522-4233022 + 81 1.10e-07 aatgaattaa tgaatgaatgaa cggatgaa chr9:132990075-132990575 - 39 2.74e-07 AATGAATGAC TGAACAAATGAA TGAGCAAATG chr20:63056827-63057327 - 56 3.87e-07 AATGAAGGAA TGAATAAGTGAA CAAATAAGTA chr14:99192665-99193165 + 77 3.87e-07 agtaaattag tgaataagtgaa taagtgaatg chr17:36825034-36825534 + 19 3.87e-07 aaaatgTTGC tgaaggaatgaa tgaatgagtg chr9:133734153-133734653 - 83 6.11e-07 AATGAA TGAATGAGTGAA TGAATGAGTG chr10:125973158-12597365 - 30 9.45e-07 ACATCAGTGT TGAACAAATGAT TTTTTTCACA chr12:56115376-56115876 + 21 9.45e-07 acgtattttc tgaacaaatgAT GCATTGTAGC chr16:57486550-57487050 - 6 9.45e-07 ATGTGATTCC TGAAGAAGTGAA GGGGT chr12:120584228-12058472 + 28 9.45e-07 AACGCTGTTC TGAACAAATGAT TTACTTTTCC chr1:6157679-6158179 - 82 1.17e-06 ATGAATG TGAATAACTGAA GTTGGGAGGT chr1:22271812-22272312 - 84 1.17e-06 ATAAA TGAACAAGTGAA TGCATGAATG chr6:52243254-52243754 - 36 1.40e-06 TGCCCTGGAT GGAAGAAATGAA ATCACCCAGT chr12:13099906-13100406 + 52 1.40e-06 aatgaatgaa tgaatgaatgaG ATTTGTAATG chr16:88247420-88247920 + 54 1.68e-06 gagtgaatcg tgaatgactgaa tgagtgagtg chr1:224873198-224873698 - 32 1.68e-06 GAATGAGTAA TGAATGAGTGAT GCAGGGAGGT chr17:75105477-75105977 + 39 2.53e-06 ATAAACTCTG TGAACTAATGAA GCTGACAAAC chr19:841255-841755 + 2 2.53e-06 A TGAGTGAATGAA TCAATGAGTG chr12:121888256-12188875 + 8 2.53e-06 GTGGATG TGAAGAACTGAA TTGGAGCGCC chr9:131635217-131635717 + 26 2.87e-06 AAGACTCCCT TGAACAACTGAA TGGGTTACGT chr1:200890670-200891170 + 41 2.87e-06 aaatgtttat tgaacaactgaa AACCGGGAAG chr15:67139175-67139675 - 53 3.15e-06 TAAAGGCTAG GGAAGAAATGAT TTCATTGAGG chr16:778815-779315 - 9 3.67e-06 AATGAGTGAG TGAATGAGTGAG TGAGTGAA chr1:10833914-10834414 - 63 3.67e-06 AGTGAATGGG TGAATGAGTGAG TGAATGAATG chr9:136150600-136151100 + 73 3.67e-06 aatgagtgag tgaatgagtgag cgagtgaatg chr9:136581066-136581566 - 88 3.67e-06 G TGAATGAGTGAG TGAATGAGTG chr16:1308283-1308783 + 89 4.01e-06 CGTGAGAGAG GGAAGGAATGAT chr19:17482813-17483313 + 40 5.25e-06 aatgaatgag ggaacgagtgaa ggagggaatg chr12:2057094-2057594 + 16 5.25e-06 gatgcaaggc tgaacaaataaa tgtctgcgtg chr10:1498786-1499286 - 47 5.25e-06 TGACGAGTAA TGAGTGAATGAT GAGTAATGAA chr5:1034969-1035469 + 26 7.23e-06 agttaatgag tgaacgagtgag ttaatgaatg chr16:29273505-29274005 + 46 7.23e-06 gagtgaatcg tgaatgactgag tgaatgagtg chrX:120603664-120604164 - 83 7.23e-06 TGAGAG GGAAGAAGTGAT AGAGCAATTG chr11:113014266-11301476 - 31 7.97e-06 TCATTCATCT TAAAGAAATGAA GGAGGCCCGT chr2:70293300-70293800 + 7 8.93e-06 ACCGGA AGAAGAAATGAA GTGAAGCGGC chr9:136579540-136580040 - 80 1.03e-05 ATGAGCAAG TGAGTGAATGAG TGGGTGAGTG chr1:234544510-234545010 + 41 1.03e-05 TTGCTTTAGG TGAACAAATAAT GCCGCTGGAC chr5:73394047-73394547 - 17 1.16e-05 CATGGAAGCA TGAATGCATGAA AATGAGGCAA chr20:63543699-63544199 + 85 1.16e-05 aatgaatgag tgaattagtgag gaat chr5:124735012-124735512 + 55 1.16e-05 ACTAGAAGCT GGAGCAAATGAA GAAAGAGGTG chr1:227897683-227898183 + 75 1.16e-05 aatgaatgaa tgaactagtgat taatcaaaca chr7:13920084-13920584 - 64 1.26e-05 CCAGTTGACT GGAAGTAATGAT TAATGCTCAT chr6:20542981-20543481 - 89 1.26e-05 . GGAGGGAATGAA AAATGGTATA chrX:136251459-136251959 - 7 1.40e-05 TAGGTAAAGG TGAAGAAAGGAA TGTTGG chr8:37392989-37393489 - 1 1.40e-05 GGGCAAAATA TGAAGAAAGGAA chr10:61974503-61975003 - 32 1.40e-05 TAGTCATGAG GGAACTAATGAT ATGAACAGAT chr11:1201699-1202199 + 60 1.40e-05 aatgggtaag tgaatgagcgaa tgagtgagag chr19:29845566-29846066 - 79 1.40e-05 GTGGGGTGGA GGAAGAACTGAT GGGATTCTGG chr15:98896850-98897350 - 65 1.54e-05 CCTCTTTACA GGAATAAATGAC GTGCCAATGG chr1:228902931-228903431 - 76 1.54e-05 ATGAGGATTG GGAATAAATGAC CAAATATAAA chr17:7013093-7013593 + 48 1.72e-05 CGCCACTTCA AGAAGAAATGAT ATGAAGAAGT chr12:50505433-50505933 - 68 1.72e-05 TAAAGGAAAG AGAAGAAATGAT GCTGCGGATT chr7:98686547-98687047 + 60 1.72e-05 aacgaatgag tgaacaaatgga caaacaaatg chr1:201554899-201555399 - 37 1.93e-05 ATAGGGTCAT TGAAGAAGTAAT TAGTGAAGAT chr3:194089421-194089921 - 2 2.16e-05 GCTTCCTTCC TGAATTAATGAC T chr7:656950-657450 + 84 2.16e-05 tgtgcatgga tggataaatgaa tggat chr6:167839254-167839754 + 86 2.16e-05 tgatctcaag gGAGGAAGTGAA CAA chr5:174514924-174515424 + 76 2.34e-05 TGAACTTTGA TGAAATAATGAA ACAGCCCTGG chr13:42110329-42110829 + 28 2.58e-05 CATTTGATAA GGAAGAAGTAAA TTCAGAATTT chrX:153333629-153334129 - 89 2.58e-05 . TGAACGAGCGAA CAAATCGACC chr19:13758313-13758813 + 1 2.58e-05 . tgaatgtatgaa ttactttaac chr2:191321782-191322282 - 11 2.85e-05 ATTTAATCCC TTAATAACTGAA ATGGAAGAGT chr19:38224022-38224522 - 1 2.85e-05 CCGCCCCCCG GGAATGAATGGA chr10:15704476-15704976 + 39 3.15e-05 atttgcttca agaagtaatgaa aacctctcag chr1:93078908-93079408 + 4 3.15e-05 GGC GGAAGGACTGAG CCTCACTGCA chr19:4197621-4198121 + 17 3.50e-05 catgaaaggg tgagcgaataaa caaatgagtg chr2:173414948-173415448 - 72 3.50e-05 AAGGGAGGAA GGAAGAAAGGAA AAAGAAAGAA chr16:31072987-31073487 + 8 3.50e-05 GGAGGAC TGAACGAAGGAT GAGGAGATGA chr19:40549391-40549891 - 2 3.86e-05 AGTGACTTCA TGAATAAATCAA C chr3:181328972-181329472 - 88 3.86e-05 C TAAAGGACTGAA AAAATTATCT chr3:197298666-197299166 - 65 4.20e-05 AATGAGCGAA TGAATGAACAAA CCTTCTCTGC chr5:90547951-90548451 + 51 4.59e-05 CTCGAAGTTA GGAATGAAGGAT TTGTTTGCCT chr14:74140273-74140773 + 80 4.59e-05 CTCCAGTGCA GGAAGTACTGAT TAAACCTGA chr1:18602351-18602851 + 85 5.01e-05 gaatgcatag tgaatgaatgca tgca chr5:17305907-17306407 + 37 5.46e-05 AGTTGCGTGT TAAACAAATAAA TTAGAGATTC chr18:59455119-59455619 - 69 5.46e-05 GTGCTCCCTT TGAAGAACTGGA TTAGCAGAGG chr3:14603191-14603691 + 49 5.99e-05 AATCAGCGCA TAAGTGAGTGAA TACACAGGTA chr19:4723787-4724287 - 18 7.08e-05 ATCATGGGTT TGACTGAGTGAT ACCAAGTCAC chr10:132942674-13294317 - 79 7.08e-05 ACTGACTGAC TGACTGACTGAA TGGATGAATG chr7:102991587-102992087 + 56 7.69e-05 GCATGAGTCA GGAATAAGTGGT GCGCAGTGTG chr12:93442112-93442612 - 46 8.36e-05 CAGGCTGAGC TGAAAGAACGAA CGCGTGAGCT chr1:233635929-233636429 + 60 8.36e-05 ggttttgttg taagcaagtgaa gttgaggagt chr3:182212315-182212815 + 13 8.36e-05 TAAGTTGGCT GGAACTACTGAG TAATCCCATG chr3:138833408-138833908 - 12 8.36e-05 GACTGTCTGG TGAAGTCATGAT AATTAAATGA chr6:3230857-3231357 - 2 9.08e-05 GTGTGTGTAA GGAAATAATGAT G chr6:26103667-26104167 - 54 9.08e-05 CTATCGCAGT GGAAGGTATGAA CTGAAACAGT chr1:151494691-151495191 + 46 9.08e-05 TTTAGGTTAA TGAGCTACTGAT CACCTGCCAA chr22:49942453-49942953 + 28 9.86e-05 aatgagtaat tgagtgaacgag tgagtgaatg chr10:129440201-12944070 - 52 9.86e-05 GCTGGGTGGT TGAACAAGTGGG TGAGGTAGAG chr5:76790523-76791023 - 75 9.86e-05 GTTTGCTATT GGAATGACTAAG AGCTGCATCA chr9:85743211-85743711 + 24 1.07e-04 GTTTGCCACA AGAGTGAGTGAT TTATGTTTTG chr12:56041716-56042216 + 51 1.07e-04 CTTTGTTCCA TGGATAAATAAA CACTAGGAAC chr7:80833766-80834266 - 37 1.07e-04 ATTGTGAGGT TAAAGGAATGAC AATGCCATTC chr13:110965217-11096571 - 41 1.15e-04 GAGTCAGGGT GGAGTAAGTAAT CAGAATGAGT chr17:58391411-58391911 + 23 1.34e-04 GTTTACAGGC TGAGTTAACGAT TACAGGCAAT chr1:234700131-234700631 - 81 1.57e-04 AAATAACA GTAATAAATAAT GCCTCTGAGT chr1:228781078-228781578 - 14 1.57e-04 GTTGACATAT TTAACGAGTAAA GCAGCTCATT chr6:108295594-108296094 - 50 1.81e-04 CAGTTTAGTG CGAATACATGAA TAGAGCAGTA chr5:124740945-124741445 - 15 1.94e-04 CGCCACTCCC TTAATACGTGAA CAAAATCAAA chr10:63707201-63707701 + 33 2.09e-04 GCTAATAAAG GTAGTAAATGAG TCATTTTCCA chr16:22948800-22949300 - 33 2.25e-04 AATGAATGAA CGAACGAACGAA GGAAGGAATG chr12:89769154-89769654 - 10 2.25e-04 ATGTCAATGG TAAATACGTGAT TGGGCCAAA chrX:101407978-101408478 - 41 5.31e-04 TCTGCTCACG TAAGCGAGTAAT CACGTGAGCG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAABRARTGAW MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:4815149-4815649 5.4e-08 58_[-4]_30 chr7:101547512-101548012 5.4e-08 45_[-4]_43 chr19:4232522-4233022 1.1e-07 80_[+4]_8 chr9:132990075-132990575 2.7e-07 38_[-4]_50 chr20:63056827-63057327 3.9e-07 55_[-4]_33 chr14:99192665-99193165 3.9e-07 76_[+4]_12 chr17:36825034-36825534 3.9e-07 18_[+4]_70 chr9:133734153-133734653 6.1e-07 82_[-4]_6 chr10:125973158-12597365 9.4e-07 29_[-4]_59 chr12:56115376-56115876 9.4e-07 20_[+4]_68 chr16:57486550-57487050 9.4e-07 5_[-4]_83 chr12:120584228-12058472 9.4e-07 27_[+4]_61 chr1:6157679-6158179 1.2e-06 81_[-4]_7 chr1:22271812-22272312 1.2e-06 83_[-4]_5 chr6:52243254-52243754 1.4e-06 35_[-4]_53 chr12:13099906-13100406 1.4e-06 51_[+4]_37 chr16:88247420-88247920 1.7e-06 53_[+4]_35 chr1:224873198-224873698 1.7e-06 31_[-4]_57 chr17:75105477-75105977 2.5e-06 38_[+4]_50 chr19:841255-841755 2.5e-06 1_[+4]_87 chr12:121888256-12188875 2.5e-06 7_[+4]_81 chr9:131635217-131635717 2.9e-06 25_[+4]_63 chr1:200890670-200891170 2.9e-06 40_[+4]_48 chr15:67139175-67139675 3.2e-06 52_[-4]_36 chr16:778815-779315 3.7e-06 8_[-4]_80 chr1:10833914-10834414 3.7e-06 62_[-4]_26 chr9:136150600-136151100 3.7e-06 72_[+4]_16 chr9:136581066-136581566 3.7e-06 87_[-4]_1 chr16:1308283-1308783 4e-06 88_[+4] chr19:17482813-17483313 5.3e-06 39_[+4]_49 chr12:2057094-2057594 5.3e-06 15_[+4]_73 chr10:1498786-1499286 5.3e-06 46_[-4]_42 chr5:1034969-1035469 7.2e-06 25_[+4]_63 chr16:29273505-29274005 7.2e-06 45_[+4]_43 chrX:120603664-120604164 7.2e-06 82_[-4]_6 chr11:113014266-11301476 8e-06 30_[-4]_58 chr2:70293300-70293800 8.9e-06 6_[+4]_82 chr9:136579540-136580040 1e-05 79_[-4]_9 chr1:234544510-234545010 1e-05 40_[+4]_48 chr5:73394047-73394547 1.2e-05 16_[-4]_72 chr20:63543699-63544199 1.2e-05 84_[+4]_4 chr5:124735012-124735512 1.2e-05 54_[+4]_34 chr1:227897683-227898183 1.2e-05 74_[+4]_14 chr7:13920084-13920584 1.3e-05 63_[-4]_25 chr6:20542981-20543481 1.3e-05 88_[-4] chrX:136251459-136251959 1.4e-05 6_[-4]_82 chr8:37392989-37393489 1.4e-05 [-4]_88 chr10:61974503-61975003 1.4e-05 31_[-4]_57 chr11:1201699-1202199 1.4e-05 59_[+4]_29 chr19:29845566-29846066 1.4e-05 78_[-4]_10 chr15:98896850-98897350 1.5e-05 64_[-4]_24 chr1:228902931-228903431 1.5e-05 75_[-4]_13 chr17:7013093-7013593 1.7e-05 47_[+4]_41 chr12:50505433-50505933 1.7e-05 67_[-4]_21 chr7:98686547-98687047 1.7e-05 59_[+4]_29 chr1:201554899-201555399 1.9e-05 36_[-4]_52 chr3:194089421-194089921 2.2e-05 1_[-4]_87 chr7:656950-657450 2.2e-05 83_[+4]_5 chr6:167839254-167839754 2.2e-05 85_[+4]_3 chr5:174514924-174515424 2.3e-05 75_[+4]_13 chr13:42110329-42110829 2.6e-05 27_[+4]_61 chrX:153333629-153334129 2.6e-05 88_[-4] chr19:13758313-13758813 2.6e-05 [+4]_88 chr2:191321782-191322282 2.8e-05 10_[-4]_78 chr19:38224022-38224522 2.8e-05 [-4]_88 chr10:15704476-15704976 3.1e-05 38_[+4]_50 chr1:93078908-93079408 3.1e-05 3_[+4]_85 chr19:4197621-4198121 3.5e-05 16_[+4]_72 chr2:173414948-173415448 3.5e-05 71_[-4]_17 chr16:31072987-31073487 3.5e-05 7_[+4]_81 chr19:40549391-40549891 3.9e-05 1_[-4]_87 chr3:181328972-181329472 3.9e-05 87_[-4]_1 chr3:197298666-197299166 4.2e-05 64_[-4]_24 chr5:90547951-90548451 4.6e-05 50_[+4]_38 chr14:74140273-74140773 4.6e-05 79_[+4]_9 chr1:18602351-18602851 5e-05 84_[+4]_4 chr5:17305907-17306407 5.5e-05 36_[+4]_52 chr18:59455119-59455619 5.5e-05 68_[-4]_20 chr3:14603191-14603691 6e-05 48_[+4]_40 chr19:4723787-4724287 7.1e-05 17_[-4]_71 chr10:132942674-13294317 7.1e-05 78_[-4]_10 chr7:102991587-102992087 7.7e-05 55_[+4]_33 chr12:93442112-93442612 8.4e-05 45_[-4]_43 chr1:233635929-233636429 8.4e-05 59_[+4]_29 chr3:182212315-182212815 8.4e-05 12_[+4]_76 chr3:138833408-138833908 8.4e-05 11_[-4]_77 chr6:3230857-3231357 9.1e-05 1_[-4]_87 chr6:26103667-26104167 9.1e-05 53_[-4]_35 chr1:151494691-151495191 9.1e-05 45_[+4]_43 chr22:49942453-49942953 9.9e-05 27_[+4]_61 chr10:129440201-12944070 9.9e-05 51_[-4]_37 chr5:76790523-76791023 9.9e-05 74_[-4]_14 chr9:85743211-85743711 0.00011 23_[+4]_65 chr12:56041716-56042216 0.00011 50_[+4]_38 chr7:80833766-80834266 0.00011 36_[-4]_52 chr13:110965217-11096571 0.00011 40_[-4]_48 chr17:58391411-58391911 0.00013 22_[+4]_66 chr1:234700131-234700631 0.00016 80_[-4]_8 chr1:228781078-228781578 0.00016 13_[-4]_75 chr6:108295594-108296094 0.00018 49_[-4]_39 chr5:124740945-124741445 0.00019 14_[-4]_74 chr10:63707201-63707701 0.00021 32_[+4]_56 chr16:22948800-22949300 0.00022 32_[-4]_56 chr12:89769154-89769654 0.00022 9_[-4]_79 chrX:101407978-101408478 0.00053 40_[-4]_48 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAABRARTGAW MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAABRARTGAW width=12 seqs=105 chr19:4815149-4815649 ( 59) TGAATAAATGAA 1 chr7:101547512-101548012 ( 46) TGAATAAATGAA 1 chr19:4232522-4233022 ( 81) TGAATGAATGAA 1 chr9:132990075-132990575 ( 39) TGAACAAATGAA 1 chr20:63056827-63057327 ( 56) TGAATAAGTGAA 1 chr14:99192665-99193165 ( 77) TGAATAAGTGAA 1 chr17:36825034-36825534 ( 19) TGAAGGAATGAA 1 chr9:133734153-133734653 ( 83) TGAATGAGTGAA 1 chr10:125973158-12597365 ( 30) TGAACAAATGAT 1 chr12:56115376-56115876 ( 21) TGAACAAATGAT 1 chr16:57486550-57487050 ( 6) TGAAGAAGTGAA 1 chr12:120584228-12058472 ( 28) TGAACAAATGAT 1 chr1:6157679-6158179 ( 82) TGAATAACTGAA 1 chr1:22271812-22272312 ( 84) TGAACAAGTGAA 1 chr6:52243254-52243754 ( 36) GGAAGAAATGAA 1 chr12:13099906-13100406 ( 52) TGAATGAATGAG 1 chr16:88247420-88247920 ( 54) TGAATGACTGAA 1 chr1:224873198-224873698 ( 32) TGAATGAGTGAT 1 chr17:75105477-75105977 ( 39) TGAACTAATGAA 1 chr19:841255-841755 ( 2) TGAGTGAATGAA 1 chr12:121888256-12188875 ( 8) TGAAGAACTGAA 1 chr9:131635217-131635717 ( 26) TGAACAACTGAA 1 chr1:200890670-200891170 ( 41) TGAACAACTGAA 1 chr15:67139175-67139675 ( 53) GGAAGAAATGAT 1 chr16:778815-779315 ( 9) TGAATGAGTGAG 1 chr1:10833914-10834414 ( 63) TGAATGAGTGAG 1 chr9:136150600-136151100 ( 73) TGAATGAGTGAG 1 chr9:136581066-136581566 ( 88) TGAATGAGTGAG 1 chr16:1308283-1308783 ( 89) GGAAGGAATGAT 1 chr19:17482813-17483313 ( 40) GGAACGAGTGAA 1 chr12:2057094-2057594 ( 16) TGAACAAATAAA 1 chr10:1498786-1499286 ( 47) TGAGTGAATGAT 1 chr5:1034969-1035469 ( 26) TGAACGAGTGAG 1 chr16:29273505-29274005 ( 46) TGAATGACTGAG 1 chrX:120603664-120604164 ( 83) GGAAGAAGTGAT 1 chr11:113014266-11301476 ( 31) TAAAGAAATGAA 1 chr2:70293300-70293800 ( 7) AGAAGAAATGAA 1 chr9:136579540-136580040 ( 80) TGAGTGAATGAG 1 chr1:234544510-234545010 ( 41) TGAACAAATAAT 1 chr5:73394047-73394547 ( 17) TGAATGCATGAA 1 chr20:63543699-63544199 ( 85) TGAATTAGTGAG 1 chr5:124735012-124735512 ( 55) GGAGCAAATGAA 1 chr1:227897683-227898183 ( 75) TGAACTAGTGAT 1 chr7:13920084-13920584 ( 64) GGAAGTAATGAT 1 chr6:20542981-20543481 ( 89) GGAGGGAATGAA 1 chrX:136251459-136251959 ( 7) TGAAGAAAGGAA 1 chr8:37392989-37393489 ( 1) TGAAGAAAGGAA 1 chr10:61974503-61975003 ( 32) GGAACTAATGAT 1 chr11:1201699-1202199 ( 60) TGAATGAGCGAA 1 chr19:29845566-29846066 ( 79) GGAAGAACTGAT 1 chr15:98896850-98897350 ( 65) GGAATAAATGAC 1 chr1:228902931-228903431 ( 76) GGAATAAATGAC 1 chr17:7013093-7013593 ( 48) AGAAGAAATGAT 1 chr12:50505433-50505933 ( 68) AGAAGAAATGAT 1 chr7:98686547-98687047 ( 60) TGAACAAATGGA 1 chr1:201554899-201555399 ( 37) TGAAGAAGTAAT 1 chr3:194089421-194089921 ( 2) TGAATTAATGAC 1 chr7:656950-657450 ( 84) TGGATAAATGAA 1 chr6:167839254-167839754 ( 86) GGAGGAAGTGAA 1 chr5:174514924-174515424 ( 76) TGAAATAATGAA 1 chr13:42110329-42110829 ( 28) GGAAGAAGTAAA 1 chrX:153333629-153334129 ( 89) TGAACGAGCGAA 1 chr19:13758313-13758813 ( 1) TGAATGTATGAA 1 chr2:191321782-191322282 ( 11) TTAATAACTGAA 1 chr19:38224022-38224522 ( 1) GGAATGAATGGA 1 chr10:15704476-15704976 ( 39) AGAAGTAATGAA 1 chr1:93078908-93079408 ( 4) GGAAGGACTGAG 1 chr19:4197621-4198121 ( 17) TGAGCGAATAAA 1 chr2:173414948-173415448 ( 72) GGAAGAAAGGAA 1 chr16:31072987-31073487 ( 8) TGAACGAAGGAT 1 chr19:40549391-40549891 ( 2) TGAATAAATCAA 1 chr3:181328972-181329472 ( 88) TAAAGGACTGAA 1 chr3:197298666-197299166 ( 65) TGAATGAACAAA 1 chr5:90547951-90548451 ( 51) GGAATGAAGGAT 1 chr14:74140273-74140773 ( 80) GGAAGTACTGAT 1 chr1:18602351-18602851 ( 85) TGAATGAATGCA 1 chr5:17305907-17306407 ( 37) TAAACAAATAAA 1 chr18:59455119-59455619 ( 69) TGAAGAACTGGA 1 chr3:14603191-14603691 ( 49) TAAGTGAGTGAA 1 chr19:4723787-4724287 ( 18) TGACTGAGTGAT 1 chr10:132942674-13294317 ( 79) TGACTGACTGAA 1 chr7:102991587-102992087 ( 56) GGAATAAGTGGT 1 chr12:93442112-93442612 ( 46) TGAAAGAACGAA 1 chr1:233635929-233636429 ( 60) TAAGCAAGTGAA 1 chr3:182212315-182212815 ( 13) GGAACTACTGAG 1 chr3:138833408-138833908 ( 12) TGAAGTCATGAT 1 chr6:3230857-3231357 ( 2) GGAAATAATGAT 1 chr6:26103667-26104167 ( 54) GGAAGGTATGAA 1 chr1:151494691-151495191 ( 46) TGAGCTACTGAT 1 chr22:49942453-49942953 ( 28) TGAGTGAACGAG 1 chr10:129440201-12944070 ( 52) TGAACAAGTGGG 1 chr5:76790523-76791023 ( 75) GGAATGACTAAG 1 chr9:85743211-85743711 ( 24) AGAGTGAGTGAT 1 chr12:56041716-56042216 ( 51) TGGATAAATAAA 1 chr7:80833766-80834266 ( 37) TAAAGGAATGAC 1 chr13:110965217-11096571 ( 41) GGAGTAAGTAAT 1 chr17:58391411-58391911 ( 23) TGAGTTAACGAT 1 chr1:234700131-234700631 ( 81) GTAATAAATAAT 1 chr1:228781078-228781578 ( 14) TTAACGAGTAAA 1 chr6:108295594-108296094 ( 50) CGAATACATGAA 1 chr5:124740945-124741445 ( 15) TTAATACGTGAA 1 chr10:63707201-63707701 ( 33) GTAGTAAATGAG 1 chr16:22948800-22949300 ( 33) CGAACGAACGAA 1 chr12:89769154-89769654 ( 10) TAAATACGTGAT 1 chrX:101407978-101408478 ( 41) TAAGCGAGTAAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAABRARTGAW MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 9.52867 E= 1.8e-027 -237 -373 2 145 -170 -1336 179 -237 199 -1336 -373 -1336 175 -373 -73 -1336 -311 2 8 86 92 -1336 66 -89 192 -241 -1336 -370 116 -73 22 -1336 -1336 -192 -241 184 -100 -473 178 -1336 193 -473 -241 -1336 111 -273 -82 21 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAABRARTGAW MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 105 E= 1.8e-027 0.047619 0.019048 0.257143 0.676190 0.076190 0.000000 0.876190 0.047619 0.980952 0.000000 0.019048 0.000000 0.828571 0.019048 0.152381 0.000000 0.028571 0.257143 0.266667 0.447619 0.466667 0.000000 0.400000 0.133333 0.933333 0.047619 0.000000 0.019048 0.552381 0.152381 0.295238 0.000000 0.000000 0.066667 0.047619 0.885714 0.123810 0.009524 0.866667 0.000000 0.942857 0.009524 0.047619 0.000000 0.533333 0.038095 0.142857 0.285714 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAABRARTGAW MEME-4 regular expression -------------------------------------------------------------------------------- [TG]GAA[TGC][AG]A[AG]TGA[AT] -------------------------------------------------------------------------------- Time 1236.48 secs. ******************************************************************************** ******************************************************************************** MOTIF CHGGCACAYAGTAGGYGCTCARTAAATR MEME-5 width = 28 sites = 17 llr = 359 E-value = 3.2e-031 ******************************************************************************** -------------------------------------------------------------------------------- Motif CHGGCACAYAGTAGGYGCTCARTAAATR MEME-5 Description -------------------------------------------------------------------------------- Simplified A :223:716181:91:12:::961898:5 pos.-specific C 831171834112:::4:818:::11121 probability G 1:661::1::8:19a171::14:1::14 matrix T 151:222:61:8:::512921:91117: bits 2.0 * 1.8 * 1.6 * * * * 1.4 **** * * * * Relative 1.2 * ****** *** * ** Entropy 1.0 * ** ****** ****** *** (30.5 bits) 0.8 * ************ *********** 0.6 * ************ ************ 0.4 **************************** 0.2 **************************** 0.0 ---------------------------- Multilevel CTGGCACATAGTAGGTGCTCAATAAATA consensus C ATT CC CA T G CG sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CHGGCACAYAGTAGGYGCTCARTAAATR MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------------- chr19:18682942-18683442 + 28 9.24e-17 tccagtttgc ctggcacatagtaggtgctcagtaaata ttccttgaat chr3:45618045-45618545 - 50 2.98e-12 GAGCAGGTGC CAAGCTCACAGCAGGCGCTCAATAAACA TCTACCAAGT chr19:1445424-1445924 + 5 2.98e-12 ggac ccagcacacagtaggtgctttataaatg cttgttgcat chr12:124940110-12494061 - 59 3.71e-12 TACACTTTAC CCGGCACACAGTAGGTGCTCAGTGCATG CACGGAACCT chr12:121888256-12188875 + 58 7.06e-12 GTacagtatc catccatacagtaggcgctcaataaatg tctgctgcac chr17:29149022-29149522 + 51 1.76e-11 taaaacagtt cctacatatagtaggcattcagtaaatg cttattgatg chr1:85062554-85063054 + 8 1.95e-11 atattgc ctagtacatagtaggaactcaataaaCC ATGAATGAGT chr1:200890670-200891170 + 8 3.81e-11 catcgtg ctgggcactagtaggtgctcaataaatg tttattgaac chr20:50113559-50114059 - 63 6.04e-11 AGCACAGTGT CTGGTACATAGTAGGTGCTTAATGTTTG TTTGTTTGGT chr6:167839254-167839754 - 15 1.12e-10 CTGACAAAGT CTGACTCCTAACAGGCTCTCAATAAATA CCAGTCTGAA chr9:37415230-37415730 - 64 2.84e-10 CCCCACAGT CTGGCACCATGCAGGTGCTCAGTCAATA TTCGTTAAAT chr10:104329249-10432974 + 38 4.96e-10 CGAGGCTGTG ctggcacccagtaggtgtccaaataatg cctgctgaat chr1:109901822-109902322 - 46 5.36e-10 TCCCATGGAA CCCATATATACTAGGTGCTCAATAAAGC TTTGTTGAAT chr19:1267230-1267730 + 4 7.28e-10 gaa cccgctcgtagtaagcgcttaataacta ggcactggct chr20:57266565-57267065 - 31 1.42e-09 CGCCAGGCTC TAGGCACCCCGTGGGCACTCAGTAAACA TTTGTCGAGC chr1:41870060-41870560 - 51 5.18e-09 TAAGTCGAAT GTGACTCATACTAGGGGGTCAGTAATCA CTTGTTGAAT chr17:77002219-77002719 - 41 1.03e-08 CGAATAGGGC GAGATACATCGTAAGCATTTGATAAATA TTTGCCGAAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CHGGCACAYAGTAGGYGCTCARTAAATR MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:18682942-18683442 9.2e-17 27_[+5]_45 chr3:45618045-45618545 3e-12 49_[-5]_23 chr19:1445424-1445924 3e-12 4_[+5]_68 chr12:124940110-12494061 3.7e-12 58_[-5]_14 chr12:121888256-12188875 7.1e-12 57_[+5]_15 chr17:29149022-29149522 1.8e-11 50_[+5]_22 chr1:85062554-85063054 1.9e-11 7_[+5]_65 chr1:200890670-200891170 3.8e-11 7_[+5]_65 chr20:50113559-50114059 6e-11 62_[-5]_10 chr6:167839254-167839754 1.1e-10 14_[-5]_58 chr9:37415230-37415730 2.8e-10 63_[-5]_9 chr10:104329249-10432974 5e-10 37_[+5]_35 chr1:109901822-109902322 5.4e-10 45_[-5]_27 chr19:1267230-1267730 7.3e-10 3_[+5]_69 chr20:57266565-57267065 1.4e-09 30_[-5]_42 chr1:41870060-41870560 5.2e-09 50_[-5]_22 chr17:77002219-77002719 1e-08 40_[-5]_32 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CHGGCACAYAGTAGGYGCTCARTAAATR MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CHGGCACAYAGTAGGYGCTCARTAAATR width=28 seqs=17 chr19:18682942-18683442 ( 28) CTGGCACATAGTAGGTGCTCAGTAAATA 1 chr3:45618045-45618545 ( 50) CAAGCTCACAGCAGGCGCTCAATAAACA 1 chr19:1445424-1445924 ( 5) CCAGCACACAGTAGGTGCTTTATAAATG 1 chr12:124940110-12494061 ( 59) CCGGCACACAGTAGGTGCTCAGTGCATG 1 chr12:121888256-12188875 ( 58) CATCCATACAGTAGGCGCTCAATAAATG 1 chr17:29149022-29149522 ( 51) CCTACATATAGTAGGCATTCAGTAAATG 1 chr1:85062554-85063054 ( 8) CTAGTACATAGTAGGAACTCAATAAACC 1 chr1:200890670-200891170 ( 8) CTGGGCACTAGTAGGTGCTCAATAAATG 1 chr20:50113559-50114059 ( 63) CTGGTACATAGTAGGTGCTTAATGTTTG 1 chr6:167839254-167839754 ( 15) CTGACTCCTAACAGGCTCTCAATAAATA 1 chr9:37415230-37415730 ( 64) CTGGCACCATGCAGGTGCTCAGTCAATA 1 chr10:104329249-10432974 ( 38) CTGGCACCCAGTAGGTGTCCAAATAATG 1 chr1:109901822-109902322 ( 46) CCCATATATACTAGGTGCTCAATAAAGC 1 chr19:1267230-1267730 ( 4) CCCGCTCGTAGTAAGCGCTTAATAACTA 1 chr20:57266565-57267065 ( 31) TAGGCACCCCGTGGGCACTCAGTAAACA 1 chr1:41870060-41870560 ( 51) GTGACTCATACTAGGGGGTCAGTAATCA 1 chr17:77002219-77002719 ( 41) GAGATACATCGTAAGCATTTGATAAATA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CHGGCACAYAGTAGGYGCTCARTAAATR MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 28 n= 43800 bayes= 9.64601 E= 3.2e-031 -1073 170 -110 -207 -7 22 -1073 93 -49 -110 122 -107 25 -210 135 -1073 -1073 148 -210 -7 151 -210 -1073 -7 -207 160 -1073 -49 139 22 -210 -1073 -207 48 -1073 125 174 -110 -1073 -207 -207 -110 170 -1073 -1073 -52 -1073 174 193 -1073 -210 -1073 -107 -1073 180 -1073 -1073 -1073 198 -1073 -207 70 -210 93 -7 -1073 148 -207 -1073 160 -210 -49 -1073 -210 -1073 193 -1073 160 -1073 -7 184 -1073 -210 -207 139 -1073 48 -1073 -207 -1073 -1073 193 163 -210 -110 -207 184 -210 -1073 -207 174 -210 -1073 -107 -1073 -10 -210 151 93 -110 70 -1073 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CHGGCACAYAGTAGGYGCTCARTAAATR MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 28 nsites= 17 E= 3.2e-031 0.000000 0.823529 0.117647 0.058824 0.235294 0.294118 0.000000 0.470588 0.176471 0.117647 0.588235 0.117647 0.294118 0.058824 0.647059 0.000000 0.000000 0.705882 0.058824 0.235294 0.705882 0.058824 0.000000 0.235294 0.058824 0.764706 0.000000 0.176471 0.647059 0.294118 0.058824 0.000000 0.058824 0.352941 0.000000 0.588235 0.823529 0.117647 0.000000 0.058824 0.058824 0.117647 0.823529 0.000000 0.000000 0.176471 0.000000 0.823529 0.941176 0.000000 0.058824 0.000000 0.117647 0.000000 0.882353 0.000000 0.000000 0.000000 1.000000 0.000000 0.058824 0.411765 0.058824 0.470588 0.235294 0.000000 0.705882 0.058824 0.000000 0.764706 0.058824 0.176471 0.000000 0.058824 0.000000 0.941176 0.000000 0.764706 0.000000 0.235294 0.882353 0.000000 0.058824 0.058824 0.647059 0.000000 0.352941 0.000000 0.058824 0.000000 0.000000 0.941176 0.764706 0.058824 0.117647 0.058824 0.882353 0.058824 0.000000 0.058824 0.823529 0.058824 0.000000 0.117647 0.000000 0.235294 0.058824 0.705882 0.470588 0.117647 0.411765 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CHGGCACAYAGTAGGYGCTCARTAAATR MEME-5 regular expression -------------------------------------------------------------------------------- C[TCA]G[GA][CT][AT]C[AC][TC]AGTAGG[TC][GA]CT[CT]A[AG]TAAA[TC][AG] -------------------------------------------------------------------------------- Time 1504.89 secs. ******************************************************************************** ******************************************************************************** MOTIF GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT MEME-6 width = 49 sites = 5 llr = 254 E-value = 6.7e-021 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT MEME-6 Description -------------------------------------------------------------------------------- Simplified A ::62:2::a:82:::a:::a2a228:a:8a:8:a:a2:::2:::8:2:: pos.-specific C ::2822:4::::::2:2:::8::::2:42:::4::::::::::::6::: probability G a:2::::6::2::2:::82:::8::2:::::2::2::2:288a:22::: matrix T :a::86a::a:8a88:828::::826:6::a:6:8:88a8:2:a:28aa bits 2.0 ** * ** * * * * * ** * * * ** ** 1.8 ** * ** * * * * * ** * * * ** ** 1.6 ** * ** * * * * * ** * * * ** ** 1.4 ** * ** * * * * * ** * * * ** ** Relative 1.2 ** ** * ***************** * **** ************ *** Entropy 1.0 ** ** ******************* ******************* *** (73.4 bits) 0.8 ** ** ******************* ******************* *** 0.6 ************************************************* 0.4 ************************************************* 0.2 ************************************************* 0.0 ------------------------------------------------- Multilevel GTACTTTGATATTTTATGTACAGTATATAATATATATTTTGGGTACTTT consensus CACA C GA GC CTG A AATC CC GC G AG GAT GGA sequence G C G T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------------------------- chrUn_KI270467v1:2010-25 + 50 5.69e-28 tatctttcat gtaccttcatattttatgtacagtatacaatatatattttgggtacttt ga chrUn_KI270467v1:3053-35 + 8 1.00e-27 attatgg gtactttgatattttatgtacagtatataatatatatttggggtatttt atattttatg chrUn_KI270466v1:178-678 + 21 1.87e-25 tatattttgg gtcctttgatattgtatgtacagtacataatacatattttgtgtacttt gatattttat chrUn_KI270467v1:2854-33 + 39 3.11e-25 catattttgg gtactctgataatttacgtacagtatataatacataatttgggtacttt gatattttat chr7:116218162-116218662 + 42 1.77e-18 TGATGATAAA GTGATATCATGTTTCATTGAAAAATGACCATGTAGATGTTAGGTGGATT TTTGTTTTTA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrUn_KI270467v1:2010-25 5.7e-28 49_[+6]_2 chrUn_KI270467v1:3053-35 1e-27 7_[+6]_44 chrUn_KI270466v1:178-678 1.9e-25 20_[+6]_31 chrUn_KI270467v1:2854-33 3.1e-25 38_[+6]_13 chr7:116218162-116218662 1.8e-18 41_[+6]_10 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT width=49 seqs=5 chrUn_KI270467v1:2010-25 ( 50) GTACCTTCATATTTTATGTACAGTATACAATATATATTTTGGGTACTTT 1 chrUn_KI270467v1:3053-35 ( 8) GTACTTTGATATTTTATGTACAGTATATAATATATATTTGGGGTATTTT 1 chrUn_KI270466v1:178-678 ( 21) GTCCTTTGATATTGTATGTACAGTACATAATACATATTTTGTGTACTTT 1 chrUn_KI270467v1:2854-33 ( 39) GTACTCTGATAATTTACGTACAGTATATAATACATAATTTGGGTACTTT 1 chr7:116218162-116218662 ( 42) GTGATATCATGTTTCATTGAAAAATGACCATGTAGATGTTAGGTGGATT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 49 n= 31200 bayes= 12.8587 E= 6.7e-021 -897 -897 198 -897 -897 -897 -897 201 128 -34 -34 -897 -30 166 -897 -897 -897 -34 -897 169 -30 -34 -897 128 -897 -897 -897 201 -897 66 124 -897 201 -897 -897 -897 -897 -897 -897 201 169 -897 -34 -897 -30 -897 -897 169 -897 -897 -897 201 -897 -897 -34 169 -897 -34 -897 169 201 -897 -897 -897 -897 -34 -897 169 -897 -897 166 -30 -897 -897 -34 169 201 -897 -897 -897 -30 166 -897 -897 201 -897 -897 -897 -30 -897 166 -897 -30 -897 -897 169 169 -897 -897 -30 -897 -34 -34 128 201 -897 -897 -897 -897 66 -897 128 169 -34 -897 -897 201 -897 -897 -897 -897 -897 -897 201 169 -897 -34 -897 -897 66 -897 128 201 -897 -897 -897 -897 -897 -34 169 201 -897 -897 -897 -30 -897 -897 169 -897 -897 -34 169 -897 -897 -897 201 -897 -897 -34 169 -30 -897 166 -897 -897 -897 166 -30 -897 -897 198 -897 -897 -897 -897 201 169 -897 -34 -897 -897 124 -34 -30 -30 -897 -897 169 -897 -897 -897 201 -897 -897 -897 201 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 49 nsites= 5 E= 6.7e-021 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.600000 0.200000 0.200000 0.000000 0.200000 0.800000 0.000000 0.000000 0.000000 0.200000 0.000000 0.800000 0.200000 0.200000 0.000000 0.600000 0.000000 0.000000 0.000000 1.000000 0.000000 0.400000 0.600000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.800000 0.000000 0.200000 0.000000 0.200000 0.000000 0.000000 0.800000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.200000 0.800000 0.000000 0.200000 0.000000 0.800000 1.000000 0.000000 0.000000 0.000000 0.000000 0.200000 0.000000 0.800000 0.000000 0.000000 0.800000 0.200000 0.000000 0.000000 0.200000 0.800000 1.000000 0.000000 0.000000 0.000000 0.200000 0.800000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.200000 0.000000 0.800000 0.000000 0.200000 0.000000 0.000000 0.800000 0.800000 0.000000 0.000000 0.200000 0.000000 0.200000 0.200000 0.600000 1.000000 0.000000 0.000000 0.000000 0.000000 0.400000 0.000000 0.600000 0.800000 0.200000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.800000 0.000000 0.200000 0.000000 0.000000 0.400000 0.000000 0.600000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.200000 0.800000 1.000000 0.000000 0.000000 0.000000 0.200000 0.000000 0.000000 0.800000 0.000000 0.000000 0.200000 0.800000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.200000 0.800000 0.200000 0.000000 0.800000 0.000000 0.000000 0.000000 0.800000 0.200000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.800000 0.000000 0.200000 0.000000 0.000000 0.600000 0.200000 0.200000 0.200000 0.000000 0.000000 0.800000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTACTTTSATATTTTATGTACAGTATAYAATAYATATTTTGGGTACTTT MEME-6 regular expression -------------------------------------------------------------------------------- GT[ACG][CA][TC][TAC]T[GC]AT[AG][TA]T[TG][TC]A[TC][GT][TG]A[CA]A[GA][TA][AT][TCG]A[TC][AC]AT[AG][TC]A[TG]A[TA][TG]T[TG][GA][GT]GT[AG][CGT][TA]TT -------------------------------------------------------------------------------- Time 1774.65 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTKTKTGTKTGTKTKKKTKTK MEME-7 width = 22 sites = 22 llr = 358 E-value = 5.7e-022 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTKTKTGTKTGTKTKKKTKTK MEME-7 Description -------------------------------------------------------------------------------- Simplified A :::::1:11::11:12:::::: pos.-specific C ::1::::2::1:::1::2::1: probability G :9:62526:4:6152444:5:6 matrix T a19483819683856565a593 bits 2.0 * 1.8 * * 1.6 *** * * * 1.4 *** * * * * * Relative 1.2 *** * * * * * * Entropy 1.0 *** * * *** ** *** (23.5 bits) 0.8 ***** * *** ** * **** 0.6 ******* ********* **** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel TGTGTGTGTTTGTTTTTTTGTG consensus T T G T G GGG T T sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTKTKTGTKTGTKTKKKTKTK MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr6:3230857-3231357 - 31 7.22e-12 GATGTGTGTG TGTGTGTGTGTGTGTGTGTGTG TGCGTGTGTG chr12:57111957-57112457 - 67 7.22e-12 TGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTG TGGTGTTGTG chr19:40715622-40716122 + 26 7.22e-12 TCTTTCTCtg tgtgtgtgtgtgtgtgtgtgtg tgCGCGCGCG chr1:156661283-156661783 + 74 7.22e-12 GCCCAGTCCg tgtgtgtgtgtgtgtgtgtgtg tgtgt chr1:28648535-28649035 + 74 1.67e-11 AAAGAGATTC TGTGTGTGTTTTTTTTTTTTTT TAGAG chr16:12120423-12120923 + 39 2.06e-10 GTCATCTGGC TGTGTGTCTGTGTTTATGTTTG GGTCCCTGGG chr2:136248217-136248717 + 68 9.17e-10 ctcaagtgtg tgtgtgtgtgtgtgcatgtgtg tTACATCACA chr9:18976686-18977186 - 25 1.17e-09 GCTTCACATT TGTTTTGGTTTGTGGTTTTGTG GGGTCGTTCC chr17:75368267-75368767 + 58 2.36e-09 gtcaggcGTT TGtttttttttttgttgttttt ttttttaaag chr19:47417718-47418218 - 6 2.96e-09 GCTGTGTGCA TGTGTGTGTGCATGTGTGTGTG GGGGG chr5:124661270-124661770 - 14 9.24e-09 CTTGTAACTC TGTGGGGCTTTTTTTTTTTTTT CTTCCCTGAA chr6:56529579-56530079 - 9 4.50e-08 CCATTCTTTT TGTTTTTCTTCTTTATTTTTTT AAACTTTG chr1:234534114-234534614 + 61 5.27e-08 ACCAGATTAC TGTTTTTCTTTGTTTGCTTTTA CGCCCTATTA chr22:40711436-40711936 - 26 6.15e-08 AAATACTTGG TTTTTTTGTTCTGTTTTGTTTG AGATGGAGTC chr9:124054660-124055160 - 60 1.56e-07 AGAACCATTC TGTGGTTATTGGTTTAGTTTTT GGGGTTTGTT chr5:1950664-1951164 + 4 1.67e-07 TGC TGTGTATGTGTCATCTGTTGTG CATGCGTGTG chr17:68381032-68381532 + 69 1.91e-07 ATCATGGTTT TGTTGATATTTTGGTTGCTGTG GCTAAATATT chr17:71438643-71439143 + 33 2.03e-07 ACTGTGCTGT TGTTTGTGATTGTTAAGCTGCG TGTCTCGCCA chr19:34218181-34218681 + 50 2.79e-07 GATATGCTGC TGTGGGGTTTTGTGGTTTGTTT TCTCAAACCC chr10:125973158-12597365 + 2 2.96e-07 G TGTTTGGTTTTAGTGGGCTGTG AAAAAAATCA chr10:68153530-68154030 + 64 5.89e-07 ACAGATTATT TGCATATGTTTGTTTGGCTTCT TCCTGCCCTA chr10:665551-666051 - 15 7.28e-07 TTTCATCGGG TTCGTTTGATTGATGTGTTTTG TTTTGGGAAA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTKTKTGTKTGTKTKKKTKTK MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:3230857-3231357 7.2e-12 30_[-7]_48 chr12:57111957-57112457 7.2e-12 66_[-7]_12 chr19:40715622-40716122 7.2e-12 25_[+7]_53 chr1:156661283-156661783 7.2e-12 73_[+7]_5 chr1:28648535-28649035 1.7e-11 73_[+7]_5 chr16:12120423-12120923 2.1e-10 38_[+7]_40 chr2:136248217-136248717 9.2e-10 67_[+7]_11 chr9:18976686-18977186 1.2e-09 24_[-7]_54 chr17:75368267-75368767 2.4e-09 57_[+7]_21 chr19:47417718-47418218 3e-09 5_[-7]_73 chr5:124661270-124661770 9.2e-09 13_[-7]_65 chr6:56529579-56530079 4.5e-08 8_[-7]_70 chr1:234534114-234534614 5.3e-08 60_[+7]_18 chr22:40711436-40711936 6.2e-08 25_[-7]_53 chr9:124054660-124055160 1.6e-07 59_[-7]_19 chr5:1950664-1951164 1.7e-07 3_[+7]_75 chr17:68381032-68381532 1.9e-07 68_[+7]_10 chr17:71438643-71439143 2e-07 32_[+7]_46 chr19:34218181-34218681 2.8e-07 49_[+7]_29 chr10:125973158-12597365 3e-07 1_[+7]_77 chr10:68153530-68154030 5.9e-07 63_[+7]_15 chr10:665551-666051 7.3e-07 14_[-7]_64 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTKTKTGTKTGTKTKKKTKTK MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTKTKTGTKTGTKTKKKTKTK width=22 seqs=22 chr6:3230857-3231357 ( 31) TGTGTGTGTGTGTGTGTGTGTG 1 chr12:57111957-57112457 ( 67) TGTGTGTGTGTGTGTGTGTGTG 1 chr19:40715622-40716122 ( 26) TGTGTGTGTGTGTGTGTGTGTG 1 chr1:156661283-156661783 ( 74) TGTGTGTGTGTGTGTGTGTGTG 1 chr1:28648535-28649035 ( 74) TGTGTGTGTTTTTTTTTTTTTT 1 chr16:12120423-12120923 ( 39) TGTGTGTCTGTGTTTATGTTTG 1 chr2:136248217-136248717 ( 68) TGTGTGTGTGTGTGCATGTGTG 1 chr9:18976686-18977186 ( 25) TGTTTTGGTTTGTGGTTTTGTG 1 chr17:75368267-75368767 ( 58) TGTTTTTTTTTTTGTTGTTTTT 1 chr19:47417718-47418218 ( 6) TGTGTGTGTGCATGTGTGTGTG 1 chr5:124661270-124661770 ( 14) TGTGGGGCTTTTTTTTTTTTTT 1 chr6:56529579-56530079 ( 9) TGTTTTTCTTCTTTATTTTTTT 1 chr1:234534114-234534614 ( 61) TGTTTTTCTTTGTTTGCTTTTA 1 chr22:40711436-40711936 ( 26) TTTTTTTGTTCTGTTTTGTTTG 1 chr9:124054660-124055160 ( 60) TGTGGTTATTGGTTTAGTTTTT 1 chr5:1950664-1951164 ( 4) TGTGTATGTGTCATCTGTTGTG 1 chr17:68381032-68381532 ( 69) TGTTGATATTTTGGTTGCTGTG 1 chr17:71438643-71439143 ( 33) TGTTTGTGATTGTTAAGCTGCG 1 chr19:34218181-34218681 ( 50) TGTGGGGTTTTGTGGTTTGTTT 1 chr10:125973158-12597365 ( 2) TGTTTGGTTTTAGTGGGCTGTG 1 chr10:68153530-68154030 ( 64) TGCATATGTTTGTTTGGCTTCT 1 chr10:665551-666051 ( 15) TTCGTTTGATTGATGTGTTTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTKTKTGTKTGTKTKKKTKTK MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 11.4277 E= 5.7e-022 -1110 -1110 -1110 202 -1110 -1110 185 -144 -1110 -147 -1110 188 -244 -1110 122 56 -1110 -1110 -48 173 -86 -1110 111 36 -1110 -1110 -48 173 -144 -48 122 -86 -144 -1110 -1110 188 -1110 -1110 52 136 -1110 -89 -247 173 -144 -247 122 14 -144 -1110 -89 164 -1110 -1110 85 114 -144 -147 -48 136 -44 -1110 52 88 -1110 -247 52 126 -1110 -48 52 88 -1110 -1110 -247 195 -1110 -1110 98 102 -1110 -147 -1110 188 -244 -1110 133 36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTKTKTGTKTGTKTKKKTKTK MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 22 E= 5.7e-022 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.909091 0.090909 0.000000 0.090909 0.000000 0.909091 0.045455 0.000000 0.590909 0.363636 0.000000 0.000000 0.181818 0.818182 0.136364 0.000000 0.545455 0.318182 0.000000 0.000000 0.181818 0.818182 0.090909 0.181818 0.590909 0.136364 0.090909 0.000000 0.000000 0.909091 0.000000 0.000000 0.363636 0.636364 0.000000 0.136364 0.045455 0.818182 0.090909 0.045455 0.590909 0.272727 0.090909 0.000000 0.136364 0.772727 0.000000 0.000000 0.454545 0.545455 0.090909 0.090909 0.181818 0.636364 0.181818 0.000000 0.363636 0.454545 0.000000 0.045455 0.363636 0.590909 0.000000 0.181818 0.363636 0.454545 0.000000 0.000000 0.045455 0.954545 0.000000 0.000000 0.500000 0.500000 0.000000 0.090909 0.000000 0.909091 0.045455 0.000000 0.636364 0.318182 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTKTKTGTKTGTKTKKKTKTK MEME-7 regular expression -------------------------------------------------------------------------------- TGT[GT]T[GT]TGT[TG]T[GT]T[TG]T[TG][TG][TG]T[GT]T[GT] -------------------------------------------------------------------------------- Time 2042.85 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAGTCA MEME-8 width = 7 sites = 61 llr = 593 E-value = 8.8e-019 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAGTCA MEME-8 Description -------------------------------------------------------------------------------- Simplified A ::a:::a pos.-specific C :::::a: probability G :a:a::: matrix T a:::a:: bits 2.0 ******* 1.8 ******* 1.6 ******* 1.4 ******* Relative 1.2 ******* Entropy 1.0 ******* (14.0 bits) 0.8 ******* 0.6 ******* 0.4 ******* 0.2 ******* 0.0 ------- Multilevel TGAGTCA consensus sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------- chr19:40920927-40921427 + 70 6.03e-05 GGGTAAACAC TGAGTCA CTGTGTGTAA chr10:125973158-12597365 + 75 6.03e-05 CGTGAAGATG TGAGTCA TTGTGACATC chr19:40219784-40220284 + 30 6.03e-05 CATTAGACTC TGAGTCA TGTGATCATG chr1:234700131-234700631 - 69 6.03e-05 ATAATGCCTC TGAGTCA TCCATTAACC chr17:3890065-3890565 - 73 6.03e-05 GTAGCTGTGC TGAGTCA GGCAACAGCC chr16:15590846-15591346 + 71 6.03e-05 cttgaaacag tgagtca gatcctgtta chr20:41003175-41003675 + 8 6.03e-05 TGTTTAT TGAGTCA TCCCTCCACA chr16:84618782-84619282 - 61 6.03e-05 GAAGACAGAA TGAGTCA GCTCGTGCTT chr1:183060418-183060918 - 7 6.03e-05 ATGATAATTA TGAGTCA GACATG chr17:45320808-45321308 + 77 6.03e-05 AAGTGGCTGA TGAGTCA TCTGAATGTG chr9:131635217-131635717 + 57 6.03e-05 TAAACAACGG TGAGTCA GTGTAAGAAC chr6:2985946-2986446 - 45 6.03e-05 CCACAGTTAG TGAGTCA TCGATACTTC chr5:1950664-1951164 + 54 6.03e-05 TGTGGGCGCG TGAGTCA TCTGCTCTGT chr12:26274580-26275080 + 86 6.03e-05 TGCTGAATAA TGAGTCA TGGTCAGA chr2:46481539-46482039 + 54 6.03e-05 ttcccagctc tgagtca tcctcagttc chr10:15704476-15704976 - 80 6.03e-05 TTTATGTCAG TGAGTCA CCTTCCTGAG chr10:68153530-68154030 + 2 6.03e-05 C TGAGTCA GAGCCACCAG chr1:232678510-232679010 + 10 6.03e-05 CTGCAAATA TGAGTCA CCCTGGTACG chr1:6157679-6158179 - 11 6.03e-05 GGTGATTTCA TGAGTCA GTGGAGTGTT chr1:14742236-14742736 + 83 6.03e-05 AAAAAACCAA TGAGTCA GTTCATCCGC chr1:175470939-175471439 + 10 6.03e-05 ACTGTCTTA TGAGTCA CAAGACTGAA chr15:58332058-58332558 - 84 6.03e-05 CTCGGAGTGG TGAGTCA CGCTTCGTCA chr22:40711436-40711936 + 67 6.03e-05 tacagagaca tgagtca tcgagaggct chr16:4944716-4945216 + 51 6.03e-05 GGGTCTACGG TGAGTCA TGCTCTGCCT chr13:42720345-42720845 + 48 6.03e-05 CGGGAGCTGA TGAGTCA CTGAGTGTGC chr7:80876836-80877336 + 83 6.03e-05 AGTTTGCTTC TGAGTCA GCCTTGTAAA chr12:50247047-50247547 - 1 6.03e-05 TCATTAGAAG TGAGTCA chr15:65832566-65833066 + 83 6.03e-05 AATTATCATG TGAGTCA CTGGGACAAC chr2:136248217-136248717 + 7 6.03e-05 GAAGCA TGAGTCA TAAGTGGGAA chr16:88247420-88247920 + 90 6.03e-05 agtgaatgag tgagtca atga chr7:102991587-102992087 + 76 6.03e-05 GTGCGCAGTG TGAGTCA TGCCTGTAAG chr1:228861082-228861582 - 93 6.03e-05 T TGAGTCA TCTATTTCTT chr5:124908854-124909354 + 29 6.03e-05 TGAAACAAAG TGAGTCA TCTGGTTTTG chr6:47134647-47135147 - 13 6.03e-05 TACCTTGGTG TGAGTCA TTTCCTGAGA chrX:123803387-123803887 + 78 6.03e-05 GTGTCACGTC TGAGTCA TTAGTCGGCC chr8:16825914-16826414 + 78 6.03e-05 TTCAAATAGA TGAGTCA GTACTCCCTG chr12:12398170-12398670 + 85 6.03e-05 AGGAAAAATC TGAGTCA GAACATGAG chr12:114662474-11466297 - 49 6.03e-05 TCTGGAAGGC TGAGTCA CATACTCATT chr9:1458404-1458904 + 70 6.03e-05 ACTTGGTGGC TGAGTCA TGAGGAAAAA chr1:67686531-67687031 + 93 6.03e-05 GAGATCCCTG TGAGTCA G chr1:232704677-232705177 + 91 6.03e-05 TGGCTGCTAA TGAGTCA GCT chr13:110870156-11087065 - 44 6.03e-05 TGACCAGCGC TGAGTCA GTCTAGGAGC chr19:50896546-50897046 - 73 6.03e-05 CCACATTGTA TGAGTCA CCCTGCAGCT chr1:208046403-208046903 - 11 6.03e-05 AAAACTTCCA TGAGTCA CTCCTACCCT chr5:76790523-76791023 - 15 6.03e-05 ATTCATTTTC TGAGTCA TCTAGCCGAT chr1:31170698-31171198 + 93 6.03e-05 GGGGAACTGC TGAGTCA C chr19:40715622-40716122 - 89 6.03e-05 GTGGG TGAGTCA GCCTGTTGTG chr10:104329249-10432974 - 87 6.03e-05 GCACATA TGAGTCA TGGGTCCATG chr11:9759718-9760218 + 38 6.03e-05 CACCTGAGTG TGAGTCA TCATCACCAC chr9:130780866-130781366 + 6 6.03e-05 CGCAG TGAGTCA ACGCAGTCCC chr1:156661283-156661783 - 31 6.03e-05 TGCAGGACGC TGAGTCA CCCGTGGACC chr20:50165933-50166433 - 67 6.03e-05 CAAGCACGCA TGAGTCA GAAGCAGTTA chr10:72320664-72321164 + 49 6.03e-05 tgtcagggga tgagtca gataacggtg chr17:1114993-1115493 - 75 6.03e-05 GTGAGATGGG TGAGTCA TCAGCTGGGG chr13:87123939-87124439 + 10 6.03e-05 gtaaccaca tgagtca ccatttataa chr4:40333909-40334409 - 79 6.03e-05 AGCCGCCTGA TGAGTCA CCCCATCCCT chr17:51121713-51122213 + 62 6.03e-05 TAGAGCGGGC TGAGTCA AGGATCCCGG chr6:27633136-27633636 - 40 6.03e-05 AGCTGCTTGA TGAGTCA CAGGTTCACA chr6:30769478-30769978 + 58 6.03e-05 GTGTCTTTTG TGAGTCA TCCTTGCTGC chr3:100002796-100003296 - 74 6.03e-05 CCTCAGTATG TGAGTCA CACAGACATC chr12:114914223-11491472 + 31 6.03e-05 TATGATCCAG TGAGTCA TATCGCTCCA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:40920927-40921427 6e-05 69_[+8]_24 chr10:125973158-12597365 6e-05 74_[+8]_19 chr19:40219784-40220284 6e-05 29_[+8]_64 chr1:234700131-234700631 6e-05 68_[-8]_25 chr17:3890065-3890565 6e-05 72_[-8]_21 chr16:15590846-15591346 6e-05 70_[+8]_23 chr20:41003175-41003675 6e-05 7_[+8]_86 chr16:84618782-84619282 6e-05 60_[-8]_33 chr1:183060418-183060918 6e-05 6_[-8]_87 chr17:45320808-45321308 6e-05 76_[+8]_17 chr9:131635217-131635717 6e-05 56_[+8]_37 chr6:2985946-2986446 6e-05 44_[-8]_49 chr5:1950664-1951164 6e-05 53_[+8]_40 chr12:26274580-26275080 6e-05 85_[+8]_8 chr2:46481539-46482039 6e-05 53_[+8]_40 chr10:15704476-15704976 6e-05 79_[-8]_14 chr10:68153530-68154030 6e-05 1_[+8]_92 chr1:232678510-232679010 6e-05 9_[+8]_84 chr1:6157679-6158179 6e-05 10_[-8]_83 chr1:14742236-14742736 6e-05 82_[+8]_11 chr1:175470939-175471439 6e-05 9_[+8]_84 chr15:58332058-58332558 6e-05 83_[-8]_10 chr22:40711436-40711936 6e-05 66_[+8]_27 chr16:4944716-4945216 6e-05 50_[+8]_43 chr13:42720345-42720845 6e-05 47_[+8]_46 chr7:80876836-80877336 6e-05 82_[+8]_11 chr12:50247047-50247547 6e-05 [-8]_93 chr15:65832566-65833066 6e-05 82_[+8]_11 chr2:136248217-136248717 6e-05 6_[+8]_87 chr16:88247420-88247920 6e-05 89_[+8]_4 chr7:102991587-102992087 6e-05 75_[+8]_18 chr1:228861082-228861582 6e-05 92_[-8]_1 chr5:124908854-124909354 6e-05 28_[+8]_65 chr6:47134647-47135147 6e-05 12_[-8]_81 chrX:123803387-123803887 6e-05 77_[+8]_16 chr8:16825914-16826414 6e-05 77_[+8]_16 chr12:12398170-12398670 6e-05 84_[+8]_9 chr12:114662474-11466297 6e-05 48_[-8]_45 chr9:1458404-1458904 6e-05 69_[+8]_24 chr1:67686531-67687031 6e-05 92_[+8]_1 chr1:232704677-232705177 6e-05 90_[+8]_3 chr13:110870156-11087065 6e-05 43_[-8]_50 chr19:50896546-50897046 6e-05 72_[-8]_21 chr1:208046403-208046903 6e-05 10_[-8]_83 chr5:76790523-76791023 6e-05 14_[-8]_79 chr1:31170698-31171198 6e-05 92_[+8]_1 chr19:40715622-40716122 6e-05 88_[-8]_5 chr10:104329249-10432974 6e-05 86_[-8]_7 chr11:9759718-9760218 6e-05 37_[+8]_56 chr9:130780866-130781366 6e-05 5_[+8]_88 chr1:156661283-156661783 6e-05 30_[-8]_63 chr20:50165933-50166433 6e-05 66_[-8]_27 chr10:72320664-72321164 6e-05 48_[+8]_45 chr17:1114993-1115493 6e-05 74_[-8]_19 chr13:87123939-87124439 6e-05 9_[+8]_84 chr4:40333909-40334409 6e-05 78_[-8]_15 chr17:51121713-51122213 6e-05 61_[+8]_32 chr6:27633136-27633636 6e-05 39_[-8]_54 chr6:30769478-30769978 6e-05 57_[+8]_36 chr3:100002796-100003296 6e-05 73_[-8]_20 chr12:114914223-11491472 6e-05 30_[+8]_63 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAGTCA width=7 seqs=61 chr19:40920927-40921427 ( 70) TGAGTCA 1 chr10:125973158-12597365 ( 75) TGAGTCA 1 chr19:40219784-40220284 ( 30) TGAGTCA 1 chr1:234700131-234700631 ( 69) TGAGTCA 1 chr17:3890065-3890565 ( 73) TGAGTCA 1 chr16:15590846-15591346 ( 71) TGAGTCA 1 chr20:41003175-41003675 ( 8) TGAGTCA 1 chr16:84618782-84619282 ( 61) TGAGTCA 1 chr1:183060418-183060918 ( 7) TGAGTCA 1 chr17:45320808-45321308 ( 77) TGAGTCA 1 chr9:131635217-131635717 ( 57) TGAGTCA 1 chr6:2985946-2986446 ( 45) TGAGTCA 1 chr5:1950664-1951164 ( 54) TGAGTCA 1 chr12:26274580-26275080 ( 86) TGAGTCA 1 chr2:46481539-46482039 ( 54) TGAGTCA 1 chr10:15704476-15704976 ( 80) TGAGTCA 1 chr10:68153530-68154030 ( 2) TGAGTCA 1 chr1:232678510-232679010 ( 10) TGAGTCA 1 chr1:6157679-6158179 ( 11) TGAGTCA 1 chr1:14742236-14742736 ( 83) TGAGTCA 1 chr1:175470939-175471439 ( 10) TGAGTCA 1 chr15:58332058-58332558 ( 84) TGAGTCA 1 chr22:40711436-40711936 ( 67) TGAGTCA 1 chr16:4944716-4945216 ( 51) TGAGTCA 1 chr13:42720345-42720845 ( 48) TGAGTCA 1 chr7:80876836-80877336 ( 83) TGAGTCA 1 chr12:50247047-50247547 ( 1) TGAGTCA 1 chr15:65832566-65833066 ( 83) TGAGTCA 1 chr2:136248217-136248717 ( 7) TGAGTCA 1 chr16:88247420-88247920 ( 90) TGAGTCA 1 chr7:102991587-102992087 ( 76) TGAGTCA 1 chr1:228861082-228861582 ( 93) TGAGTCA 1 chr5:124908854-124909354 ( 29) TGAGTCA 1 chr6:47134647-47135147 ( 13) TGAGTCA 1 chrX:123803387-123803887 ( 78) TGAGTCA 1 chr8:16825914-16826414 ( 78) TGAGTCA 1 chr12:12398170-12398670 ( 85) TGAGTCA 1 chr12:114662474-11466297 ( 49) TGAGTCA 1 chr9:1458404-1458904 ( 70) TGAGTCA 1 chr1:67686531-67687031 ( 93) TGAGTCA 1 chr1:232704677-232705177 ( 91) TGAGTCA 1 chr13:110870156-11087065 ( 44) TGAGTCA 1 chr19:50896546-50897046 ( 73) TGAGTCA 1 chr1:208046403-208046903 ( 11) TGAGTCA 1 chr5:76790523-76791023 ( 15) TGAGTCA 1 chr1:31170698-31171198 ( 93) TGAGTCA 1 chr19:40715622-40716122 ( 89) TGAGTCA 1 chr10:104329249-10432974 ( 87) TGAGTCA 1 chr11:9759718-9760218 ( 38) TGAGTCA 1 chr9:130780866-130781366 ( 6) TGAGTCA 1 chr1:156661283-156661783 ( 31) TGAGTCA 1 chr20:50165933-50166433 ( 67) TGAGTCA 1 chr10:72320664-72321164 ( 49) TGAGTCA 1 chr17:1114993-1115493 ( 75) TGAGTCA 1 chr13:87123939-87124439 ( 10) TGAGTCA 1 chr4:40333909-40334409 ( 79) TGAGTCA 1 chr17:51121713-51122213 ( 62) TGAGTCA 1 chr6:27633136-27633636 ( 40) TGAGTCA 1 chr6:30769478-30769978 ( 58) TGAGTCA 1 chr3:100002796-100003296 ( 74) TGAGTCA 1 chr12:114914223-11491472 ( 31) TGAGTCA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 7 n= 56400 bayes= 10.5421 E= 8.8e-019 -1257 -1257 -1257 202 -1257 -1257 198 -1257 202 -1257 -1257 -1257 -1257 -1257 198 -1257 -1257 -1257 -1257 202 -1257 198 -1257 -1257 202 -1257 -1257 -1257 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 7 nsites= 61 E= 8.8e-019 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCA MEME-8 regular expression -------------------------------------------------------------------------------- TGAGTCA -------------------------------------------------------------------------------- Time 2308.12 secs. ******************************************************************************** ******************************************************************************** MOTIF GTCACGTGACVSRSSM MEME-9 width = 16 sites = 37 llr = 431 E-value = 7.1e-010 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTCACGTGACVSRSSM MEME-9 Description -------------------------------------------------------------------------------- Simplified A 1::a:2::8:3132:4 pos.-specific C 11a:8::::6332435 probability G 8::::8:a1:355461 matrix T :9::2:a:1312111: bits 2.0 * ** 1.8 ** ** 1.6 *** ** 1.4 **** ** Relative 1.2 ******* Entropy 1.0 ********* (16.8 bits) 0.8 ********** 0.6 ********** * 0.4 ********** ** 0.2 **************** 0.0 ---------------- Multilevel GTCACGTGACAGGGGC consensus TCCACCA sequence G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACGTGACVSRSSM MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr19:10701170-10701670 + 22 8.75e-09 GGATCGCGTG GTCACGTGACAGCGGC CAACATGGCG chr12:55715781-55716281 + 61 4.75e-08 TGACACAGCG GTCACGTGACATGGCC CCGGGGAGCC chr19:10653791-10654291 + 2 5.85e-08 C GTCACGTGATGGAGGA CTCCCAGTAC chr19:48954495-48954995 + 40 5.85e-08 TCATTGGACA GTCACGTGACGGGACC AAACCTCCCG chr19:40348279-40348779 + 79 7.75e-08 AGTCGTAACC GTCACGTGACCGCCCA CCGTCG chr10:50067626-50068126 - 46 1.14e-07 GTGACCTGAT GTCACGTGACAGAACC CGCACGTGAT chr10:45726933-45727433 - 51 1.14e-07 GTGACCTGAT GTCACGTGACAGAACC CGCACGTGAT chr11:65711802-65712302 + 13 1.35e-07 CCCGGTGGGC GTCACGTGACGGACTC AGTAGACCGC chr16:28974519-28975019 - 50 1.87e-07 CTTAAAGCCG GTCATGTGACGCGGGA GCCAGGGTGG chr1:155241046-155241546 + 43 2.34e-07 GACTAGGAGC GTCACATGACACAGGA AGTGAGGCAA chr8:125091570-125092070 + 7 3.36e-07 CAGGCG GTCACATGACCGAAGC GGCTGGGAGC chr15:75335784-75336284 + 32 5.51e-07 GTTAGTCCAA GTCACGTGATCGTCGA CTCAGCTGAC chr15:74099994-74100494 - 73 5.51e-07 GTTAGTCCAA GTCACGTGATCGTCGA CTCAGCTGAC chr17:74514097-74514597 + 48 6.05e-07 gataggtgat gtcatgtgatcgacga tcatgtgatg chr17:74514299-74514799 + 38 6.05e-07 gtgacatgtg gtcatgtgacaggtga tgtcatgtga chr20:45891051-45891551 + 40 6.71e-07 GAGGAAGACT GTCACGTGGCGCCGGA GTTCACGTGA chr6:87155289-87155789 - 21 7.49e-07 GTTCGGCGGG GTCACGTGCCGGGCGC GCTTGCACGG chr12:122266234-12226673 - 40 7.49e-07 TGGACGTTTG GTCACGTGACTGCGTC CGTGGTCCTC chr17:7234345-7234845 + 36 8.44e-07 GCCGCCCTCC GTCACGTGATCCCCTC CCAATCACGT chr1:236524367-236524867 - 1 8.44e-07 GTCAAAGGAA GTCACATGACTTGCGC chr19:39073634-39074134 - 64 9.51e-07 TGCATATGAT GTCACATGTCAGGGGA CCTGTGAGCC chr15:72375773-72376273 - 77 2.72e-06 CGCCTCTG GTCACGTGATTCGCCG ATAAGTCACG chrX:101407978-101408478 + 16 2.95e-06 TGACCGAGAT CTCACATGACGTAGGC GCTCACGTGA chr21:33968194-33968694 - 79 4.92e-06 GCCATG GTCATGTGACGAGGTA AAGCCAGCAG chr19:33521520-33522020 + 58 5.73e-06 CGGCACCGGC GTCACGTGAAGTGCGG CGTCAGCTGA chr8:30722793-30723293 + 6 5.73e-06 CTTTT GTCACATGATCAACCC TTACTACCCA chr12:2812686-2813186 - 46 7.29e-06 CATGCTCACG CTCACGTGGCACGCTC GGGCGGCCTC chr16:1826963-1827463 - 37 7.85e-06 TGCCCCTGTA GTCACGTGGGCTGGGC CGGTCAGCTG chr13:113296760-11329726 - 79 8.42e-06 CCTGGA CCCACGTGACCCGGCC TGGTCCGGGG chr7:131107860-131108360 + 74 9.02e-06 TATCATGTCC ATCATGTGACACCAGA GAGGCCTCTC chr6:27495560-27496060 + 2 9.02e-06 C GTCACCTGACACGTCA TTTCACCAAT chr16:31032993-31033493 - 39 9.67e-06 CCCTGTGACT GTCACGTGTCCCGGCT CTGTCACCGC chr19:47515201-47515701 + 43 1.04e-05 ACCGCAGACA CTCACGTGACAGCTCG GGGCCCACGC chr7:36128896-36129396 - 70 1.29e-05 ATAGTGGCCA GTCATATGATGGAAGG TCACAGTGCT chr9:97922047-97922547 + 10 1.37e-05 CCAAAGCAC ATCACGTGGTCTCCGC AGCACGTGAC chr19:40750241-40750741 - 69 1.56e-05 TGCGTGTAAT ACCACGTGATATGGGA AAGGCAGTGT chr17:42998043-42998543 - 81 1.77e-05 CTGA GTCTCGTGTTGCGGGC GGAAGAAGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACGTGACVSRSSM MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:10701170-10701670 8.8e-09 21_[+9]_63 chr12:55715781-55716281 4.8e-08 60_[+9]_24 chr19:10653791-10654291 5.9e-08 1_[+9]_83 chr19:48954495-48954995 5.9e-08 39_[+9]_45 chr19:40348279-40348779 7.8e-08 78_[+9]_6 chr10:50067626-50068126 1.1e-07 45_[-9]_39 chr10:45726933-45727433 1.1e-07 50_[-9]_34 chr11:65711802-65712302 1.4e-07 12_[+9]_72 chr16:28974519-28975019 1.9e-07 49_[-9]_35 chr1:155241046-155241546 2.3e-07 42_[+9]_42 chr8:125091570-125092070 3.4e-07 6_[+9]_78 chr15:75335784-75336284 5.5e-07 31_[+9]_53 chr15:74099994-74100494 5.5e-07 72_[-9]_12 chr17:74514097-74514597 6e-07 47_[+9]_37 chr17:74514299-74514799 6e-07 37_[+9]_47 chr20:45891051-45891551 6.7e-07 39_[+9]_45 chr6:87155289-87155789 7.5e-07 20_[-9]_64 chr12:122266234-12226673 7.5e-07 39_[-9]_45 chr17:7234345-7234845 8.4e-07 35_[+9]_49 chr1:236524367-236524867 8.4e-07 [-9]_84 chr19:39073634-39074134 9.5e-07 63_[-9]_21 chr15:72375773-72376273 2.7e-06 76_[-9]_8 chrX:101407978-101408478 3e-06 15_[+9]_69 chr21:33968194-33968694 4.9e-06 78_[-9]_6 chr19:33521520-33522020 5.7e-06 57_[+9]_27 chr8:30722793-30723293 5.7e-06 5_[+9]_79 chr12:2812686-2813186 7.3e-06 45_[-9]_39 chr16:1826963-1827463 7.9e-06 36_[-9]_48 chr13:113296760-11329726 8.4e-06 78_[-9]_6 chr7:131107860-131108360 9e-06 73_[+9]_11 chr6:27495560-27496060 9e-06 1_[+9]_83 chr16:31032993-31033493 9.7e-06 38_[-9]_46 chr19:47515201-47515701 1e-05 42_[+9]_42 chr7:36128896-36129396 1.3e-05 69_[-9]_15 chr9:97922047-97922547 1.4e-05 9_[+9]_75 chr19:40750241-40750741 1.6e-05 68_[-9]_16 chr17:42998043-42998543 1.8e-05 80_[-9]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACGTGACVSRSSM MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTCACGTGACVSRSSM width=16 seqs=37 chr19:10701170-10701670 ( 22) GTCACGTGACAGCGGC 1 chr12:55715781-55716281 ( 61) GTCACGTGACATGGCC 1 chr19:10653791-10654291 ( 2) GTCACGTGATGGAGGA 1 chr19:48954495-48954995 ( 40) GTCACGTGACGGGACC 1 chr19:40348279-40348779 ( 79) GTCACGTGACCGCCCA 1 chr10:50067626-50068126 ( 46) GTCACGTGACAGAACC 1 chr10:45726933-45727433 ( 51) GTCACGTGACAGAACC 1 chr11:65711802-65712302 ( 13) GTCACGTGACGGACTC 1 chr16:28974519-28975019 ( 50) GTCATGTGACGCGGGA 1 chr1:155241046-155241546 ( 43) GTCACATGACACAGGA 1 chr8:125091570-125092070 ( 7) GTCACATGACCGAAGC 1 chr15:75335784-75336284 ( 32) GTCACGTGATCGTCGA 1 chr15:74099994-74100494 ( 73) GTCACGTGATCGTCGA 1 chr17:74514097-74514597 ( 48) GTCATGTGATCGACGA 1 chr17:74514299-74514799 ( 38) GTCATGTGACAGGTGA 1 chr20:45891051-45891551 ( 40) GTCACGTGGCGCCGGA 1 chr6:87155289-87155789 ( 21) GTCACGTGCCGGGCGC 1 chr12:122266234-12226673 ( 40) GTCACGTGACTGCGTC 1 chr17:7234345-7234845 ( 36) GTCACGTGATCCCCTC 1 chr1:236524367-236524867 ( 1) GTCACATGACTTGCGC 1 chr19:39073634-39074134 ( 64) GTCACATGTCAGGGGA 1 chr15:72375773-72376273 ( 77) GTCACGTGATTCGCCG 1 chrX:101407978-101408478 ( 16) CTCACATGACGTAGGC 1 chr21:33968194-33968694 ( 79) GTCATGTGACGAGGTA 1 chr19:33521520-33522020 ( 58) GTCACGTGAAGTGCGG 1 chr8:30722793-30723293 ( 6) GTCACATGATCAACCC 1 chr12:2812686-2813186 ( 46) CTCACGTGGCACGCTC 1 chr16:1826963-1827463 ( 37) GTCACGTGGGCTGGGC 1 chr13:113296760-11329726 ( 79) CCCACGTGACCCGGCC 1 chr7:131107860-131108360 ( 74) ATCATGTGACACCAGA 1 chr6:27495560-27496060 ( 2) GTCACCTGACACGTCA 1 chr16:31032993-31033493 ( 39) GTCACGTGTCCCGGCT 1 chr19:47515201-47515701 ( 43) CTCACGTGACAGCTCG 1 chr7:36128896-36129396 ( 70) GTCATATGATGGAAGG 1 chr9:97922047-97922547 ( 10) ATCACGTGGTCTCCGC 1 chr19:40750241-40750741 ( 69) ACCACGTGATATGGGA 1 chr17:42998043-42998543 ( 81) GTCTCGTGTTGCGGGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACGTGACVSRSSM MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 11.8512 E= 7.1e-010 -161 -123 168 -1185 -1185 -222 -1185 194 -1185 198 -1185 -1185 198 -1185 -1185 -319 -1185 173 -1185 -61 -39 -322 163 -1185 -1185 -1185 -1185 202 -1185 -1185 198 -1185 167 -322 -123 -161 -319 136 -322 27 39 23 23 -161 -219 23 86 -39 13 -23 86 -219 -61 47 68 -161 -1185 23 117 -87 61 94 -123 -319 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACGTGACVSRSSM MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 37 E= 7.1e-010 0.081081 0.108108 0.810811 0.000000 0.000000 0.054054 0.000000 0.945946 0.000000 1.000000 0.000000 0.000000 0.972973 0.000000 0.000000 0.027027 0.000000 0.837838 0.000000 0.162162 0.189189 0.027027 0.783784 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.783784 0.027027 0.108108 0.081081 0.027027 0.648649 0.027027 0.297297 0.324324 0.297297 0.297297 0.081081 0.054054 0.297297 0.459459 0.189189 0.270270 0.216216 0.459459 0.054054 0.162162 0.351351 0.405405 0.081081 0.000000 0.297297 0.567568 0.135135 0.378378 0.486486 0.108108 0.027027 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTCACGTGACVSRSSM MEME-9 regular expression -------------------------------------------------------------------------------- GTCACGTGA[CT][ACG][GC][GAC][GC][GC][CA] -------------------------------------------------------------------------------- Time 2572.85 secs. ******************************************************************************** ******************************************************************************** MOTIF ATATTTTATGTACAGTATATAA MEME-10 width = 22 sites = 5 llr = 129 E-value = 4.2e-003 ******************************************************************************** -------------------------------------------------------------------------------- Motif ATATTTTATGTACAGTATATAA MEME-10 Description -------------------------------------------------------------------------------- Simplified A a28::::a:::a:8:2a:a:aa pos.-specific C ::::::2:::::8::2:2:2:: probability G :22::::::a::::a::::::: matrix T :6:aaa8:a:a:22:6:8:8:: bits 2.0 * *** ***** * * * ** 1.8 * *** ***** * * * ** 1.6 * *** ***** * * * ** 1.4 * *** ***** * * * ** Relative 1.2 * ************* ****** Entropy 1.0 * ************* ****** (37.2 bits) 0.8 * ************* ****** 0.6 ********************** 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel ATATTTTATGTACAGTATATAA consensus AG C TT A C C sequence G C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATTTTATGTACAGTATATAA MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chrUn_KI270467v1:2854-33 + 5 4.68e-14 tttc atattttatgtacagtatataa tgcatatttt chrUn_KI270466v1:178-678 + 71 2.36e-13 gtgtactttg atattttatgtacagcatataa tatatatt chrUn_KI270467v1:3053-35 + 57 5.21e-13 ggggtatttt atattttatgtacagtatacaa tatatatttt chrUn_KI270467v1:2010-25 + 16 7.13e-13 gtgtactttg agattttatgtacagaatataa tatatctttc chr16:25049562-25050062 - 55 2.94e-11 TATCATGATC AAGTTTCATGTATTGTACATAA TTGTATGTGT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATTTTATGTACAGTATATAA MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chrUn_KI270467v1:2854-33 4.7e-14 4_[+10]_74 chrUn_KI270466v1:178-678 2.4e-13 70_[+10]_8 chrUn_KI270467v1:3053-35 5.2e-13 56_[+10]_22 chrUn_KI270467v1:2010-25 7.1e-13 15_[+10]_63 chr16:25049562-25050062 2.9e-11 54_[-10]_24 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATTTTATGTACAGTATATAA MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF ATATTTTATGTACAGTATATAA width=22 seqs=5 chrUn_KI270467v1:2854-33 ( 5) ATATTTTATGTACAGTATATAA 1 chrUn_KI270466v1:178-678 ( 71) ATATTTTATGTACAGCATATAA 1 chrUn_KI270467v1:3053-35 ( 57) ATATTTTATGTACAGTATACAA 1 chrUn_KI270467v1:2010-25 ( 16) AGATTTTATGTACAGAATATAA 1 chr16:25049562-25050062 ( 55) AAGTTTCATGTATTGTACATAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATTTTATGTACAGTATATAA MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 14.154 E= 4.2e-003 201 -897 -897 -897 -30 -897 -34 128 169 -897 -34 -897 -897 -897 -897 201 -897 -897 -897 201 -897 -897 -897 201 -897 -34 -897 169 201 -897 -897 -897 -897 -897 -897 201 -897 -897 198 -897 -897 -897 -897 201 201 -897 -897 -897 -897 166 -897 -30 169 -897 -897 -30 -897 -897 198 -897 -30 -34 -897 128 201 -897 -897 -897 -897 -34 -897 169 201 -897 -897 -897 -897 -34 -897 169 201 -897 -897 -897 201 -897 -897 -897 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATTTTATGTACAGTATATAA MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 5 E= 4.2e-003 1.000000 0.000000 0.000000 0.000000 0.200000 0.000000 0.200000 0.600000 0.800000 0.000000 0.200000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.200000 0.000000 0.800000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.800000 0.000000 0.200000 0.800000 0.000000 0.000000 0.200000 0.000000 0.000000 1.000000 0.000000 0.200000 0.200000 0.000000 0.600000 1.000000 0.000000 0.000000 0.000000 0.000000 0.200000 0.000000 0.800000 1.000000 0.000000 0.000000 0.000000 0.000000 0.200000 0.000000 0.800000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif ATATTTTATGTACAGTATATAA MEME-10 regular expression -------------------------------------------------------------------------------- A[TAG][AG]TTT[TC]ATGTA[CT][AT]G[TAC]A[TC]A[TC]AA -------------------------------------------------------------------------------- Time 2828.24 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr17:45383887-45384387 2.22e-20 44_[-1(5.03e-14)]_1_[-2(2.11e-10)]_\ 17 chr1:80054110-80054610 3.35e-02 100 chr20:53609814-53610314 5.07e-01 100 chr14:68140177-68140677 3.63e-01 100 chr1:234534114-234534614 8.67e-04 60_[+7(5.27e-08)]_18 chr6:125050658-125051158 4.27e-02 39_[+2(3.45e-05)]_45 chr10:12720368-12720868 7.15e-01 100 chr1:65254894-65255394 1.27e-13 50_[-8(6.03e-05)]_1_[-2(4.14e-08)]_\ 26 chr10:132942674-13294317 5.37e-19 31_[-1(5.03e-14)]_2_[-1(1.23e-12)]_\ 1_[-4(7.08e-05)]_10 chr10:1498786-1499286 7.64e-09 3_[-2(2.13e-06)]_11_[+3(2.27e-07)]_\ 6_[+3(3.42e-07)]_6_[+3(3.42e-07)]_22 chr6:26285328-26285828 7.90e-01 100 chr19:39033068-39033568 5.73e-01 100 chr19:8367520-8368020 4.19e-19 77_[-1(5.03e-14)]_1 chr10:17059123-17059623 3.23e-01 100 chr21:43718655-43719155 1.42e-16 28_[+1(1.29e-11)]_50 chr6:157323215-157323715 9.02e-01 100 chr5:5340229-5340729 8.62e-02 100 chr19:36916278-36916778 9.59e-01 100 chr5:56123678-56124178 8.25e-01 100 chr12:114914223-11491472 5.53e-03 30_[+8(6.03e-05)]_63 chr7:98686547-98687047 1.96e-16 16_[+1(1.84e-09)]_10_[+1(1.20e-08)]_\ 6_[+1(3.41e-09)]_2 chr3:100002796-100003296 3.86e-02 73_[-8(6.03e-05)]_20 chr7:80833766-80834266 1.04e-01 100 chr1:148522518-148523018 7.56e-02 9_[+7(6.85e-05)]_69 chr6:30769478-30769978 2.57e-01 57_[+8(6.03e-05)]_36 chr6:27633136-27633636 1.22e-01 39_[-8(6.03e-05)]_54 chr12:52926707-52927207 4.91e-21 30_[+1(5.03e-14)]_1_[+2(4.76e-09)]_\ 31 chr8:30722793-30723293 1.51e-01 5_[+9(5.73e-06)]_79 chr16:50806532-50807032 4.00e-11 27_[+1(7.17e-08)]_51 chr1:228647620-228648120 8.97e-01 100 chr17:7242766-7243266 6.08e-01 100 chr5:140327468-140327968 8.11e-07 22_[+4(1.10e-07)]_66 chr1:232793902-232794402 7.74e-01 100 chr1:224873198-224873698 6.80e-11 31_[-4(1.68e-06)]_[-1(4.28e-08)]_35 chr17:17742212-17742712 1.95e-19 4_[+1(5.03e-14)]_6_[+1(7.94e-12)]_\ 46 chr17:51121713-51122213 2.17e-01 61_[+8(6.03e-05)]_32 chr15:69143727-69144227 2.88e-02 56_[-10(3.47e-06)]_22 chr6:27495560-27496060 7.06e-02 1_[+9(9.02e-06)]_83 chr9:87140774-87141274 3.73e-02 66_[+7(2.06e-05)]_12 chr16:25257932-25258432 8.04e-01 100 chr4:40333909-40334409 1.44e-01 78_[-8(6.03e-05)]_15 chr9:124862029-124862529 1.09e-13 25_[-1(1.29e-11)]_53 chr16:49084602-49085102 5.52e-01 100 chr19:1445424-1445924 7.59e-06 4_[+5(2.98e-12)]_68 chr6:20542981-20543481 4.41e-04 88_[-4(1.26e-05)] chr19:2032438-2032938 8.24e-18 64_[-1(2.45e-12)]_14 chr2:47176350-47176850 8.93e-01 100 chr6:143755246-143755746 1.91e-01 100 chr10:121310107-12131060 6.65e-01 100 chr19:35947298-35947798 5.99e-01 100 chr6:16947452-16947952 3.64e-01 100 chr17:7836747-7837247 8.94e-01 100 chr20:3795657-3796157 9.99e-01 100 chr9:37415230-37415730 2.92e-13 39_[-1(1.11e-06)]_2_[-5(2.84e-10)]_\ 9 chr12:806436-806936 1.82e-06 66_[+1(2.74e-06)]_12 chr4:80307274-80307774 7.95e-01 100 chr6:30646476-30646976 5.28e-19 52_[-1(8.68e-13)]_26 chr13:87123939-87124439 1.90e-02 9_[+8(6.03e-05)]_59_[-9(3.77e-05)]_\ 9 chr5:111091983-111092483 6.75e-01 100 chr12:25333770-25334270 1.52e-02 31_[-6(5.86e-05)]_20 chr1:42179917-42180417 4.88e-01 100 chr5:124661270-124661770 1.98e-03 13_[-7(9.24e-09)]_65 chr17:1114993-1115493 1.14e-01 74_[-8(6.03e-05)]_19 chr10:72320664-72321164 1.19e-01 48_[+8(6.03e-05)]_45 chr19:38683668-38684168 5.73e-01 100 chr17:45783296-45783796 9.98e-01 100 chr19:33521520-33522020 6.09e-01 57_[+9(5.73e-06)]_27 chr19:34218181-34218681 7.83e-03 49_[+7(2.79e-07)]_29 chr20:50165933-50166433 4.56e-02 66_[-8(6.03e-05)]_27 chr18:59455119-59455619 3.27e-01 68_[-4(5.46e-05)]_20 chr1:164611723-164612223 3.60e-01 100 chr18:49655959-49656459 9.10e-01 100 chr1:107767194-107767694 3.77e-01 100 chr1:156661283-156661783 2.71e-06 30_[-8(6.03e-05)]_36_[+7(7.22e-12)]_\ 5 chr19:48954495-48954995 6.25e-02 39_[+9(5.85e-08)]_23_[-9(1.87e-07)]_\ 6 chr12:57752224-57752724 8.98e-01 74_[+9(5.14e-05)]_10 chr6:100592859-100593359 1.17e-02 100 chr6:125511886-125512386 4.99e-01 100 chr15:66883335-66883835 4.74e-01 100 chrX:120603664-120604164 2.60e-03 82_[-4(7.23e-06)]_6 chr5:92552268-92552768 1.49e-01 100 chr1:47690347-47690847 1.53e-01 100 chr9:130780866-130781366 3.99e-02 5_[+8(6.03e-05)]_88 chr17:30906033-30906533 1.00e+00 100 chr5:99900359-99900859 1.09e-01 100 chrX:73944015-73944515 9.72e-01 100 chr12:113966041-11396654 1.00e+00 100 chr1:201721095-201721595 9.02e-02 86_[-3(5.40e-05)]_2 chr1:201554899-201555399 8.30e-04 36_[-4(1.93e-05)]_52 chr11:9759718-9760218 4.00e-01 37_[+8(6.03e-05)]_56 chr5:136729903-136730403 5.49e-02 45_[+10(8.74e-05)]_33 chr1:200890670-200891170 1.59e-19 7_[+5(3.81e-11)]_5_[+4(2.87e-06)]_7_\ [+1(2.09e-08)]_19 chr10:60951230-60951730 6.72e-02 19_[-9(6.53e-05)]_65 chr1:234745749-234746249 7.73e-01 100 chr10:104329249-10432974 5.57e-07 37_[+5(4.96e-10)]_21_[-8(6.03e-05)]_\ 7 chr19:45424003-45424503 3.21e-14 3_[-1(1.09e-09)]_75 chr19:36837962-36838462 1.14e-02 17_[-2(4.35e-06)]_42_[-7(8.64e-05)]_\ 3 chr19:13758313-13758813 5.49e-13 [+4(2.58e-05)]_9_[+2(2.77e-07)]_2_\ [-7(5.23e-05)]_5_[+1(7.50e-09)]_12 chr6:168147185-168147685 1.66e-01 100 chr19:40715622-40716122 3.67e-06 23_[+7(7.22e-12)]_43_[-8(6.03e-05)]_\ 5 chr6:167839254-167839754 1.17e-12 14_[-5(1.12e-10)]_13_[+4(3.87e-07)]_\ 18_[+4(2.16e-05)]_3 chr17:43483580-43484080 4.73e-01 100 chrX:153333629-153334129 1.08e-05 49_[-1(1.45e-08)]_17_[-4(2.58e-05)] chr1:31170698-31171198 2.96e-01 92_[+8(6.03e-05)]_1 chr7:102572209-102572709 7.30e-01 100 chr13:37046903-37047403 9.19e-02 [-10(6.28e-05)]_78 chr1:235917364-235917864 1.22e-08 67_[-1(3.10e-07)]_11 chr14:74140273-74140773 7.60e-02 79_[+4(4.59e-05)]_9 chr20:37095835-37096335 8.70e-01 100 chr19:39073634-39074134 2.04e-01 63_[-9(9.51e-07)]_21 chr5:76790523-76791023 1.87e-03 14_[+2(4.16e-05)]_44_[-4(9.86e-05)]_\ 14 chr6:108295594-108296094 1.63e-03 1_[-3(1.64e-05)]_32_[-2(7.42e-05)]_\ 39 chr1:227897683-227898183 4.38e-21 2_[+2(1.87e-06)]_1_[+1(6.80e-09)]_\ 10_[+1(5.03e-14)]_1_[+4(1.16e-05)]_14 chr5:17305907-17306407 2.63e-04 36_[+4(5.46e-05)]_24_[-7(3.26e-05)]_\ 6 chr6:2028631-2029131 2.05e-01 48_[-3(9.99e-05)]_40 chr19:37594307-37594807 9.84e-01 100 chr3:14439468-14439968 8.86e-01 100 chr16:3152659-3153159 7.71e-01 100 chr1:208046403-208046903 6.43e-09 10_[-8(6.03e-05)]_15_[+4(1.40e-06)]_\ 56 chr16:31700186-31700686 4.13e-06 39_[-4(4.99e-07)]_49 chr3:42819883-42820383 2.83e-01 100 chrX:136496486-136496986 1.13e-12 33_[-1(9.68e-11)]_45 chr1:151494691-151495191 1.70e-03 45_[+4(9.08e-05)]_43 chr16:30065144-30065644 9.04e-01 100 chr5:90547951-90548451 5.61e-04 50_[+4(4.59e-05)]_38 chr19:40090495-40090995 3.69e-01 100 chr6:28212787-28213287 6.91e-01 100 chr15:89334867-89335367 6.64e-01 100 chr6:116680675-116681175 2.48e-09 37_[+1(3.92e-08)]_41 chr19:50896546-50897046 1.88e-02 72_[-8(6.03e-05)]_21 chr17:75368267-75368767 4.82e-05 57_[+7(2.36e-09)]_21 chr17:44014753-44015253 9.99e-01 100 chr19:33293218-33293718 4.59e-02 71_[-7(5.07e-05)]_7 chr22:41446656-41447156 1.00e+00 100 chr13:110870156-11087065 8.29e-02 43_[-8(6.03e-05)]_50 chr17:68019649-68020149 8.79e-01 100 chr1:44213194-44213694 9.94e-01 100 chr19:29845566-29846066 6.15e-02 78_[-4(1.40e-05)]_10 chr17:58391411-58391911 3.20e-02 100 chr1:25998125-25998625 9.96e-01 100 chr19:33304587-33305087 8.29e-13 24_[-2(2.02e-08)]_60 chr6:56529579-56530079 4.45e-06 8_[-7(4.50e-08)]_15_[-7(2.84e-06)]_\ 33 chr1:3403744-3404244 1.91e-02 47_[-10(8.12e-05)]_31 chr1:116472468-116472968 1.52e-02 100 chr15:74099994-74100494 4.78e-02 72_[-9(5.51e-07)]_12 chr3:14651379-14651879 9.57e-01 100 chr17:79914967-79915467 1.87e-20 25_[-1(2.05e-13)]_5_[-4(2.87e-06)]_\ 1_[-1(2.05e-13)]_13 chr1:81032850-81033350 5.52e-01 100 chr9:135329950-135330450 5.80e-01 100 chr19:47515201-47515701 3.14e-01 42_[+9(1.04e-05)]_42 chr3:9731327-9731827 9.89e-01 100 chr19:43596200-43596700 9.87e-01 100 chr12:121888256-12188875 2.17e-08 7_[+4(2.53e-06)]_38_[+5(7.06e-12)]_\ 15 chr22:27115760-27116260 2.86e-02 75_[+7(3.37e-05)]_3 chr12:57111957-57112457 2.49e-04 [-7(3.76e-07)]_42_[-7(7.22e-12)]_14 chr5:181222118-181222618 8.41e-01 100 chr3:4986820-4987320 1.00e+00 100 chr12:125064920-12506542 1.48e-04 4_[-3(1.70e-06)]_84 chr6:151452039-151452539 5.19e-01 100 chr1:1375059-1375559 9.40e-01 100 chr12:89769154-89769654 5.96e-03 100 chr5:168794226-168794726 1.84e-01 100 chr15:40857664-40858164 4.48e-01 100 chr9:136980634-136981134 3.96e-21 35_[-1(5.03e-14)]_1_[-4(1.10e-07)]_\ 30 chr19:38929972-38930472 7.18e-02 65_[+5(4.01e-05)]_7 chr1:206612179-206612679 9.99e-01 100 chr1:232704677-232705177 4.61e-03 90_[+8(6.03e-05)]_3 chr1:67686531-67687031 2.23e-01 92_[+8(6.03e-05)]_1 chr9:1458404-1458904 1.42e-01 69_[+8(6.03e-05)]_24 chr1:151070350-151070850 8.62e-01 100 chr7:656950-657450 1.17e-11 12_[+1(1.45e-08)]_2_[+1(1.93e-07)]_\ 6_[+1(5.70e-07)]_1_[+4(9.86e-05)]_1 chr6:16681338-16681838 8.41e-02 33_[-10(8.86e-05)]_30_\ [+3(5.65e-05)]_3 chr1:155241046-155241546 3.56e-03 16_[-9(1.56e-05)]_10_[+9(2.34e-07)]_\ 42 chr5:123814005-123814505 1.91e-02 68_[-3(9.67e-05)]_20 chr12:114662474-11466297 3.57e-13 16_[+4(5.41e-08)]_10_[-3(5.21e-05)]_\ 50 chr6:131628024-131628524 9.04e-01 100 chr7:80883577-80884077 4.02e-04 57_[+3(6.34e-06)]_31 chr6:26103667-26104167 1.40e-01 53_[-4(9.08e-05)]_35 chr7:36128896-36129396 4.54e-07 43_[-4(1.65e-07)]_14_[-9(1.29e-05)]_\ 15 chr19:1313587-1314087 7.14e-17 38_[+1(3.29e-11)]_40 chr22:27212627-27213127 4.06e-01 100 chr19:10087593-10088093 1.59e-21 27_[+1(5.03e-14)]_1_[+2(2.11e-10)]_\ 34 chr12:12398170-12398670 1.08e-04 3_[+1(3.35e-06)]_59_[+8(6.03e-05)]_\ 9 chr1:236524367-236524867 6.65e-02 [-9(8.44e-07)]_84 chr9:82923377-82923877 8.64e-01 100 chr12:65631475-65631975 1.73e-01 100 chr5:136123152-136123652 1.45e-02 100 chr1:17011059-17011559 3.04e-15 35_[-2(2.11e-10)]_49 chr1:234544510-234545010 6.01e-03 40_[+4(1.03e-05)]_48 chr8:16825914-16826414 3.08e-03 77_[+8(6.03e-05)]_16 chr3:194350280-194350780 1.61e-01 100 chr12:124940110-12494061 1.00e-11 19_[+3(6.85e-07)]_27_[-5(3.71e-12)]_\ 14 chr21:34844330-34844830 1.96e-19 48_[+2(9.96e-09)]_1_[+1(1.23e-12)]_\ 13 chr19:38224022-38224522 2.64e-01 [-4(2.85e-05)]_88 chr5:116574677-116575177 4.00e-01 100 chr1:234975046-234975546 9.45e-01 100 chrX:123803387-123803887 6.80e-02 7_[-2(5.97e-05)]_54_[+8(6.03e-05)]_\ 16 chr6:47134647-47135147 3.54e-03 12_[-8(6.03e-05)]_81 chr5:174520376-174520876 3.83e-01 100 chr5:38783037-38783537 7.96e-02 100 chr6:134109442-134109942 1.23e-01 41_[-1(9.69e-05)]_37 chr17:68381032-68381532 5.90e-05 36_[+1(7.86e-05)]_10_[+7(1.91e-07)]_\ 10 chr6:27592549-27593049 5.33e-01 100 chr7:5781581-5782081 5.15e-01 100 chr8:123396327-123396827 9.79e-01 100 chr6:84227531-84228031 6.05e-01 100 chr11:1201699-1202199 7.14e-14 5_[-3(1.58e-06)]_3_[+1(9.77e-10)]_\ 17_[+2(7.12e-08)]_1_[+1(2.03e-10)]_2 chr10:665551-666051 2.08e-02 14_[-7(7.28e-07)]_64 chr5:124908854-124909354 3.59e-03 28_[+8(6.03e-05)]_[+7(8.88e-05)]_43 chr20:50284442-50284942 3.34e-21 13_[+1(5.03e-14)]_27_[+5(2.20e-05)]_\ 10 chr5:174514924-174515424 5.16e-03 75_[+4(2.34e-05)]_13 chr10:77287732-77288232 3.51e-01 100 chr3:181328972-181329472 4.21e-04 87_[-4(3.86e-05)]_1 chr19:39411962-39412462 8.03e-01 100 chr3:45509072-45509572 1.38e-16 49_[+2(4.28e-10)]_35 chr12:52871233-52871733 2.26e-05 53_[+4(1.17e-06)]_35 chr7:70092349-70092849 2.22e-01 100 chr22:38701195-38701695 5.46e-01 100 chr7:2314881-2315381 4.89e-11 2_[-1(2.79e-09)]_31_[+3(4.02e-07)]_\ 3_[-1(1.09e-07)]_8 chr7:132255831-132256331 9.75e-01 100 chr10:72228250-72228750 8.29e-02 100 chr12:120584228-12058472 2.56e-03 27_[+4(9.45e-07)]_61 chr12:107092157-10709265 6.06e-08 21_[+4(4.99e-07)]_67 chr19:34184884-34185384 4.11e-01 14_[-6(1.49e-05)]_37 chr10:35195680-35196180 8.47e-01 100 chr17:45148371-45148871 9.47e-01 100 chr1:37989837-37990337 8.00e-01 100 chr14:81221085-81221585 9.18e-01 100 chr5:174371424-174371924 8.12e-01 100 chr17:29149022-29149522 1.87e-13 50_[+5(1.76e-11)]_9_[+4(6.11e-07)]_\ 1 chr12:89526225-89526725 1.73e-19 66_[+1(2.05e-13)]_12 chr7:98476708-98477208 6.88e-01 100 chr17:76264885-76265385 7.62e-01 100 chr13:94549508-94550008 3.32e-01 100 chr1:86774466-86774966 6.88e-01 100 chr7:13920084-13920584 7.92e-02 63_[-4(1.26e-05)]_25 chr16:3019908-3020408 5.15e-01 63_[-5(6.54e-05)]_9 chr15:36951752-36952252 2.09e-01 100 chr1:228861082-228861582 1.08e-03 7_[+2(3.45e-05)]_3_[+2(8.43e-05)]_\ 50_[-8(6.03e-05)]_1 chr7:102991587-102992087 1.37e-03 48_[+8(6.03e-05)]_[+4(7.69e-05)]_8_\ [+8(6.03e-05)]_18 chr16:30698037-30698537 9.99e-01 100 chr19:46530077-46530577 6.98e-01 100 chr5:95644278-95644778 3.09e-06 66_[+1(6.59e-08)]_12 chr7:116810321-116810821 9.31e-01 100 chr6:134111066-134111566 2.02e-17 52_[-1(4.16e-11)]_26 chr1:228902931-228903431 7.22e-05 63_[+7(1.09e-05)]_15 chr1:198763225-198763725 8.34e-02 8_[-6(9.33e-05)]_43 chr16:88247420-88247920 1.96e-15 [+4(3.67e-06)]_[-3(1.70e-07)]_3_\ [+1(1.40e-10)]_4_[+4(1.68e-06)]_5_[+1(1.40e-10)]_8 chr5:69521063-69521563 1.96e-03 57_[-2(4.36e-05)]_27 chr10:44752824-44753324 7.74e-02 100 chr2:136248217-136248717 7.19e-05 6_[+8(6.03e-05)]_54_[+7(9.17e-10)]_\ 11 chr15:65832566-65833066 6.80e-03 82_[+8(6.03e-05)]_11 chr12:50247047-50247547 6.96e-02 [-8(6.03e-05)]_93 chr16:29273505-29274005 1.75e-15 4_[-3(3.12e-06)]_3_[+1(1.40e-10)]_5_\ [+1(2.03e-10)]_2_[+1(2.29e-08)]_8 chr20:63339255-63339755 3.77e-04 16_[+2(6.66e-06)]_40_[+2(6.66e-06)]_\ 12 chr11:47578707-47579207 6.65e-02 19_[-1(5.12e-05)]_59 chr1:3992055-3992555 9.47e-01 100 chr3:138833408-138833908 1.01e-01 11_[-4(8.36e-05)]_77 chr15:58038612-58039112 2.70e-02 100 chr20:20603272-20603772 4.60e-01 100 chr19:4723787-4724287 1.52e-01 17_[-4(7.08e-05)]_71 chr8:125091570-125092070 2.04e-01 6_[+9(3.36e-07)]_14_[-9(1.66e-05)]_\ 48 chr1:205122024-205122524 6.29e-01 100 chr1:18182481-18182981 3.78e-01 100 chr19:30069387-30069887 1.35e-07 23_[+1(7.89e-10)]_55 chr16:57486550-57487050 1.25e-04 5_[-4(9.45e-07)]_57_[-4(9.45e-07)]_\ 14 chr13:40770926-40771426 2.59e-01 100 chr10:129440201-12944070 4.76e-04 51_[-2(2.84e-05)]_3_[-7(8.88e-05)]_\ 8 chr19:32373693-32374193 2.17e-01 100 chr1:68384332-68384832 1.34e-01 100 chr6:143450498-143450998 9.60e-01 100 chr13:112213448-11221394 8.49e-01 100 chr15:64387542-64388042 9.42e-01 100 chr9:98280620-98281120 1.50e-01 100 chr1:28648535-28649035 2.03e-08 73_[+7(1.67e-11)]_5 chr12:50505433-50505933 8.32e-02 67_[-4(1.72e-05)]_21 chr7:80876836-80877336 2.00e-03 82_[+8(6.03e-05)]_11 chr9:136581066-136581566 4.18e-16 12_[-1(7.11e-10)]_6_[-1(4.32e-12)]_\ 2_[-1(7.94e-12)]_1_[-4(3.67e-06)]_1 chr20:45891051-45891551 5.69e-02 39_[+9(6.71e-07)]_8_[-9(5.39e-05)]_\ 21 chr12:109996295-10999679 2.20e-01 100 chr12:49060574-49061074 9.98e-01 100 chr16:12120423-12120923 6.24e-05 38_[+7(2.06e-10)]_40 chr19:18700771-18701271 9.59e-02 100 chr5:94469815-94470315 1.27e-01 100 chr1:26470552-26471052 1.76e-01 51_[+2(6.24e-05)]_33 chr10:129605990-12960649 8.42e-01 100 chr19:29810997-29811497 1.06e-15 65_[+2(2.11e-10)]_19 chr1:12478104-12478604 4.07e-01 100 chr8:25998481-25998981 6.73e-03 38_[+6(6.27e-05)]_13 chr19:42032392-42032892 3.72e-01 100 chr3:14603191-14603691 2.78e-15 [+4(1.10e-07)]_5_[+1(2.58e-10)]_11_\ [-3(3.75e-06)]_24_[-3(2.85e-07)]_2 chr20:46021234-46021734 1.23e-20 5_[+1(5.03e-14)]_73 chr7:133492150-133492650 6.88e-01 100 chr12:6937858-6938358 3.15e-03 39_[-1(1.64e-07)]_39 chr19:35774200-35774700 3.48e-20 13_[+1(5.03e-14)]_65 chr1:159916162-159916662 5.38e-01 100 chr7:66075178-66075678 1.01e-19 36_[+1(1.02e-13)]_42 chr20:25237777-25238277 2.53e-01 27_[-2(8.08e-05)]_57 chr10:93702421-93702921 9.51e-01 100 chr8:118109177-118109677 4.79e-19 30_[+2(1.79e-07)]_1_[+1(5.20e-12)]_\ 31 chr15:70100891-70101391 1.17e-17 55_[-1(2.49e-11)]_23 chr8:60714600-60715100 9.28e-01 100 chr2:55843216-55843716 7.61e-01 100 chr12:55715781-55716281 6.91e-02 44_[+9(3.87e-06)]_[+9(4.75e-08)]_24 chr10:63707201-63707701 1.40e-04 40_[+8(6.03e-05)]_53 chr19:35643440-35643940 9.31e-01 100 chr6:35044916-35045416 1.05e-10 18_[+1(5.70e-07)]_60 chr16:31032993-31033493 6.77e-01 38_[-9(9.67e-06)]_46 chr15:74196073-74196573 2.04e-14 3_[-2(1.94e-09)]_81 chr12:54359113-54359613 4.80e-01 100 chr21:33968194-33968694 3.59e-01 78_[-9(4.92e-06)]_6 chr11:117907617-11790811 3.46e-20 57_[+2(1.15e-07)]_4_[+1(2.05e-13)]_\ 1 chr1:26620520-26621020 9.99e-01 100 chr13:42720345-42720845 7.06e-03 47_[+8(6.03e-05)]_46 chr6:6004559-6005059 7.62e-09 66_[-1(2.79e-09)]_12 chr13:112346322-11234682 8.25e-01 100 chr9:136150600-136151100 3.09e-14 1_[+1(2.86e-11)]_10_[+1(2.86e-11)]_\ 2_[+1(2.86e-11)]_5_[+2(7.74e-08)] chr16:4944716-4945216 4.40e-01 50_[+8(6.03e-05)]_15_[+8(6.03e-05)]_\ 21 chr20:58650924-58651424 1.00e+00 100 chr16:25049562-25050062 1.47e-05 54_[-10(2.94e-11)]_24 chr19:34364609-34365109 2.72e-14 52_[+2(2.80e-09)]_32 chr20:53899449-53899949 3.48e-01 100 chr12:56041716-56042216 9.36e-02 100 chr1:163321645-163322145 9.57e-01 100 chr17:34981757-34982257 9.74e-01 100 chr17:71438643-71439143 7.90e-03 32_[+7(2.03e-07)]_46 chr19:40750241-40750741 7.03e-02 68_[-9(1.56e-05)]_16 chr22:40711436-40711936 1.39e-04 25_[-7(6.15e-08)]_19_[+8(6.03e-05)]_\ 27 chrUn_KI270466v1:178-678 8.37e-25 20_[+6(1.87e-25)]_1_[+10(2.36e-13)]_\ 8 chr15:58332058-58332558 1.57e-01 83_[-8(6.03e-05)]_10 chr12:116278171-11627867 9.95e-24 22_[-5(1.03e-06)]_9_[-1(5.03e-14)]_\ 19 chr1:61141529-61142029 2.84e-03 100 chr1:220118992-220119492 3.88e-02 27_[-2(2.45e-05)]_57 chr1:175470939-175471439 5.98e-02 9_[+8(6.03e-05)]_84 chr5:6419311-6419811 7.23e-02 49_[+5(1.95e-05)]_23 chr17:61335994-61336494 2.71e-01 17_[+7(9.66e-05)]_61 chr1:234612520-234613020 5.37e-01 100 chr10:15879600-15880100 6.05e-01 100 chr17:42998043-42998543 5.45e-02 80_[-9(1.77e-05)]_4 chr8:25458862-25459362 9.90e-01 100 chr15:66886240-66886740 2.59e-02 100 chr3:182212315-182212815 2.11e-04 12_[+4(8.36e-05)]_5_[+1(4.99e-06)]_\ 49 chr15:71279071-71279571 9.25e-02 100 chr22:20496077-20496577 1.33e-10 10_[-1(1.32e-08)]_29_[-1(1.20e-08)]_\ 17 chr1:22271812-22272312 9.01e-20 2_[-1(6.18e-09)]_7_[+3(6.94e-05)]_\ [+3(8.42e-05)]_1_[-1(2.05e-13)]_5_[-2(9.83e-07)]_1 chr17:42388538-42389038 6.12e-01 100 chr10:61974503-61975003 4.95e-03 31_[-4(1.40e-05)]_57 chr6:49550540-49551040 4.57e-09 38_[+1(4.18e-09)]_40 chr11:128522470-12852297 1.83e-05 86_[-4(4.99e-07)]_2 chr1:14742236-14742736 1.21e-15 44_[+1(1.61e-10)]_16_[+8(6.03e-05)]_\ 11 chr19:18682942-18683442 1.56e-28 27_[+5(9.24e-17)]_6_[+1(3.29e-11)]_\ 17 chr1:145281018-145281518 2.23e-01 100 chr21:39313494-39313994 9.65e-01 100 chr1:109901822-109902322 6.19e-21 17_[-1(7.11e-10)]_6_[-5(5.36e-10)]_\ 27 chr6:20091888-20092388 9.48e-17 42_[+1(7.72e-11)]_36 chr8:630809-631309 2.81e-02 8_[-8(6.03e-05)]_39_[-8(6.03e-05)]_\ 32_[-8(6.03e-05)] chr8:47292665-47293165 6.11e-17 13_[+1(5.20e-12)]_65 chr4:48016744-48017244 1.26e-17 57_[-1(1.03e-11)]_21 chr3:45618045-45618545 2.27e-24 17_[-1(5.20e-12)]_10_[-5(2.98e-12)]_\ 23 chr12:124914526-12491502 7.58e-01 100 chr19:1021420-1021920 7.92e-01 [+10(7.94e-05)]_78 chr8:37479283-37479783 9.92e-01 100 chr5:124735012-124735512 1.01e-02 54_[+4(1.16e-05)]_34 chr1:15799220-15799720 2.74e-16 48_[-1(7.72e-11)]_1_[-2(2.45e-05)]_\ 13 chr19:10701170-10701670 4.70e-02 21_[+9(8.75e-09)]_63 chr1:229221378-229221878 1.67e-03 26_[+1(3.88e-05)]_30_[-7(2.43e-05)] chr13:42110329-42110829 2.72e-21 27_[+4(2.58e-05)]_19_[-1(5.03e-14)]_\ 20 chr8:144456598-144457098 9.44e-01 100 chr8:37360446-37360946 6.37e-01 100 chr19:55118233-55118733 1.94e-16 49_[+1(7.11e-10)]_29 chr4:5037945-5038445 1.92e-08 48_[-1(4.67e-08)]_30 chr1:6157679-6158179 1.21e-04 10_[-8(6.03e-05)]_64_[-4(1.17e-06)]_\ 7 chr5:125485136-125485636 1.92e-01 36_[-10(7.74e-05)]_42 chr21:25608033-25608533 7.07e-12 [+1(3.59e-08)]_78 chr11:65711802-65712302 4.43e-02 12_[+9(1.35e-07)]_72 chr13:50357574-50358074 1.42e-01 41_[+3(3.81e-05)]_47 chr17:74514299-74514799 3.35e-03 5_[+9(1.54e-06)]_16_[+9(6.05e-07)]_\ 1_[+9(1.54e-06)]_10_[-9(7.16e-05)]_4 chr5:14156522-14157022 3.61e-02 100 chr3:16482908-16483408 2.20e-02 100 chr1:93078908-93079408 7.59e-01 3_[+4(3.15e-05)]_85 chr1:232678510-232679010 2.97e-02 9_[+8(6.03e-05)]_84 chr10:45726933-45727433 1.41e-01 50_[-9(1.14e-07)]_5_[+9(2.02e-05)]_\ 13 chr15:65610906-65611406 9.97e-01 100 chr7:93232049-93232549 7.86e-01 100 chr6:27672106-27672606 2.92e-03 82_[+4(2.53e-06)]_6 chr17:36825034-36825534 8.76e-19 22_[+2(7.13e-09)]_1_[+1(1.02e-13)]_\ 6_[+1(6.14e-13)]_11 chr2:231037039-231037539 1.60e-15 37_[+1(4.81e-11)]_41 chr1:224623788-224624288 8.00e-02 100 chr3:10191723-10192223 6.46e-01 100 chr1:228781078-228781578 1.91e-01 100 chr15:98896850-98897350 7.52e-03 64_[-4(1.54e-05)]_24 chr20:57266565-57267065 7.89e-06 1_[+3(1.70e-06)]_17_[-5(1.42e-09)]_\ 42 chr12:13099906-13100406 3.68e-20 28_[+1(5.03e-14)]_1_[+4(1.40e-06)]_\ 37 chr9:110048192-110048692 1.37e-01 100 chr20:35284748-35285248 5.10e-01 100 chr10:68153530-68154030 4.65e-07 1_[+8(6.03e-05)]_15_[-9(3.98e-05)]_\ 24_[+7(5.89e-07)]_15 chr3:185283243-185283743 1.96e-19 31_[+1(5.03e-14)]_47 chr14:76486225-76486725 1.92e-01 100 chr12:54033465-54033965 9.59e-01 100 chr20:20212561-20213061 1.41e-10 45_[-2(1.93e-07)]_16_[+9(2.14e-05)]_\ 7 chr10:23408563-23409063 3.12e-01 100 chr12:2812686-2813186 3.40e-01 45_[-9(7.29e-06)]_39 chr12:41288069-41288569 9.22e-02 100 chr1:63523060-63523560 2.66e-01 100 chr10:50067626-50068126 1.54e-01 45_[-9(1.14e-07)]_5_[+9(2.02e-05)]_\ 18 chr7:116218162-116218662 5.30e-12 41_[+6(1.77e-18)]_10 chr2:191321782-191322282 3.63e-02 10_[-4(2.85e-05)]_78 chr10:101818682-10181918 1.75e-13 66_[-1(1.50e-11)]_12 chr1:154558640-154559140 8.89e-01 100 chr19:47417718-47418218 7.71e-18 5_[-7(2.96e-09)]_26_[+1(5.55e-08)]_\ 9_[+2(2.37e-09)] chr9:85743211-85743711 5.22e-04 100 chr1:156444383-156444883 6.68e-11 64_[-4(1.10e-07)]_2_[-4(5.41e-08)]_\ 10 chr6:2998453-2998953 1.40e-12 50_[+1(2.27e-09)]_28 chr19:10416562-10417062 9.77e-01 100 chr12:122266234-12226673 2.84e-01 39_[-9(7.49e-07)]_45 chr15:78317419-78317919 9.60e-20 2_[+1(5.03e-14)]_2_[+2(2.11e-10)]_\ 58 chr10:22552789-22553289 4.22e-01 100 chr1:89719660-89720160 7.41e-01 100 chr5:10601349-10601849 6.33e-01 100 chr2:70293300-70293800 2.37e-02 6_[+4(8.93e-06)]_82 chr1:183471828-183472328 9.92e-01 100 chr6:3230857-3231357 2.35e-06 1_[-4(9.08e-05)]_15_[-7(7.22e-12)]_\ 50 chr1:85062554-85063054 3.64e-29 7_[+5(1.95e-11)]_1_[+2(2.99e-07)]_1_\ [+1(5.03e-14)]_25 chr15:70526415-70526915 6.76e-01 100 chr1:155226948-155227448 1.30e-07 25_[+1(3.59e-06)]_53 chr10:94673553-94674053 7.42e-02 100 chr10:15704476-15704976 3.76e-05 14_[-1(4.59e-05)]_2_[+4(3.15e-05)]_\ 29_[-8(6.03e-05)]_14 chr15:75335784-75336284 9.84e-03 31_[+9(5.51e-07)]_53 chr6:169395973-169396473 8.87e-01 100 chr19:10569098-10569598 5.38e-01 100 chr2:230864448-230864948 9.68e-14 41_[+1(2.03e-10)]_1_[+2(3.10e-08)]_\ 2_[-3(7.19e-06)]_6 chr14:99192665-99193165 1.52e-19 5_[+1(5.03e-14)]_1_[+2(4.14e-08)]_5_\ [+1(2.86e-11)]_6_[+1(1.10e-08)]_1 chr20:362562-363062 8.30e-06 77_[+1(2.56e-06)]_1 chr17:51153285-51153785 9.43e-01 100 chr12:31749180-31749680 3.86e-01 100 chr16:28974519-28975019 3.31e-01 4_[+9(3.23e-06)]_29_[-9(1.87e-07)]_\ 35 chr1:233635929-233636429 4.15e-03 59_[+4(8.36e-05)]_29 chr12:2057094-2057594 2.13e-11 15_[+4(5.25e-06)]_8_[+2(5.23e-08)]_\ 49 chr8:37392989-37393489 8.99e-03 [-4(1.40e-05)]_15_[-9(4.42e-05)]_57 chr17:7234345-7234845 1.70e-01 35_[+9(8.44e-07)]_3_[+9(2.14e-05)]_\ 12_[-9(7.29e-06)]_2 chr2:46481539-46482039 1.83e-01 53_[+8(6.03e-05)]_40 chr12:26274580-26275080 1.23e-01 85_[+8(6.03e-05)]_8 chr6:10414233-10414733 8.58e-20 31_[+1(5.03e-14)]_47 chr17:77002219-77002719 4.53e-18 19_[-2(2.80e-09)]_5_[-5(1.03e-08)]_\ 32 chr14:23352889-23353389 1.44e-19 50_[-1(5.03e-14)]_3_[+3(2.16e-05)]_\ 13 chr5:57042472-57042972 2.83e-01 100 chr1:85274908-85275408 9.15e-02 47_[+6(6.52e-05)]_4 chr5:1950664-1951164 1.83e-04 3_[+7(1.67e-07)]_28_[+8(6.03e-05)]_\ 9_[+7(2.35e-05)]_9 chr16:31072987-31073487 8.72e-07 7_[+4(3.50e-05)]_7_[+4(2.74e-07)]_\ 62 chr5:175378418-175378918 1.43e-03 13_[-10(3.89e-06)]_65 chr14:99821654-99822154 1.68e-02 100 chr6:2985946-2986446 1.16e-09 44_[-8(6.03e-05)]_12_[-1(1.00e-07)]_\ 15 chr19:1383512-1384012 9.86e-01 100 chr15:74546098-74546598 1.00e+00 100 chr9:131635217-131635717 2.48e-06 25_[+4(2.87e-06)]_17_[-3(3.60e-05)]_\ 34 chr14:68104415-68104915 8.60e-02 100 chr22:49942453-49942953 2.14e-15 [+1(1.20e-09)]_10_[+1(4.07e-10)]_14_\ [+1(2.86e-11)]_10 chr13:35499042-35499542 2.09e-08 8_[-3(5.68e-08)]_21_[+6(8.08e-05)]_\ 10 chr5:124747142-124747642 4.97e-02 80_[+2(6.24e-05)]_4 chr9:124054660-124055160 1.99e-07 28_[+3(1.58e-06)]_19_[-7(1.56e-07)]_\ 19 chr12:12266909-12267409 9.83e-01 100 chr1:236096993-236097493 4.96e-01 13_[-8(6.03e-05)]_22_[-8(6.03e-05)]_\ 22_[-8(6.03e-05)]_22 chr6:15956263-15956763 4.71e-01 100 chr15:78437537-78438037 4.74e-01 100 chr16:4615746-4616246 2.14e-15 5_[+2(8.60e-10)]_54_[-1(8.29e-05)]_\ 3 chr1:30807363-30807863 2.79e-03 22_[-4(1.40e-06)]_66 chr19:10653791-10654291 1.87e-02 1_[+9(5.85e-08)]_63_[-9(3.22e-05)]_\ 4 chr17:50867402-50867902 7.49e-04 28_[+1(2.45e-07)]_50 chr14:36835061-36835561 7.86e-02 14_[-6(3.51e-05)]_37 chr9:18976686-18977186 1.15e-03 24_[-7(1.17e-09)]_54 chr17:45320808-45321308 3.69e-02 76_[+8(6.03e-05)]_17 chr5:59303249-59303749 6.27e-01 100 chr19:1039428-1039928 1.38e-16 36_[+1(8.68e-13)]_42 chr1:81126917-81127417 4.24e-01 100 chr2:238240121-238240621 9.45e-12 62_[-1(3.08e-09)]_16 chr9:97922047-97922547 3.61e-03 9_[+9(1.37e-05)]_24_[+2(7.75e-05)]_\ 35 chr6:150418300-150418800 1.48e-03 75_[-10(3.28e-05)]_3 chr7:131107860-131108360 4.06e-03 73_[+9(9.02e-06)]_11 chr6:138593184-138593684 5.27e-08 34_[-4(1.10e-07)]_8_[-2(4.49e-07)]_\ 30 chr10:87845950-87846450 5.85e-02 16_[+7(5.56e-05)]_62 chr10:99621005-99621505 9.07e-06 74_[+2(1.14e-06)]_10 chr1:183060418-183060918 1.36e-02 6_[-8(6.03e-05)]_49_[-5(3.79e-05)]_\ 10 chr16:84618782-84619282 5.23e-09 60_[-8(6.03e-05)]_11_[-1(7.50e-09)] chrX:136251459-136251959 4.03e-18 6_[-4(1.40e-05)]_28_[-1(3.66e-10)]_\ 32 chr2:74147394-74147894 5.25e-18 54_[+1(3.03e-12)]_24 chr7:101547512-101548012 5.59e-20 5_[-4(8.93e-06)]_[-2(9.96e-09)]_8_\ [-2(4.73e-08)]_1_[-1(8.68e-13)]_7_[+3(1.12e-07)]_1 chr10:72204253-72204753 3.70e-01 100 chr21:32771776-32772276 8.55e-01 100 chr6:36874233-36874733 1.09e-19 18_[+1(5.03e-14)]_60 chr21:36420053-36420553 6.18e-15 83_[-2(2.11e-10)]_1 chr11:113014266-11301476 6.74e-06 30_[-4(7.97e-06)]_1_[-3(1.58e-06)]_\ 45 chr14:76640829-76641329 5.88e-09 34_[+2(4.73e-08)]_50 chr8:109611146-109611646 4.30e-03 50_[+1(4.11e-05)]_28 chr10:35635417-35635917 1.20e-07 8_[+2(1.03e-07)]_76 chr1:223714047-223714547 1.99e-22 57_[-1(5.03e-14)]_1_[-2(1.22e-06)]_\ 4 chr16:1271712-1272212 9.92e-01 100 chr20:41003175-41003675 2.22e-15 7_[+8(6.03e-05)]_34_[+1(3.41e-09)]_\ 30 chr5:124740945-124741445 3.59e-04 80_[-2(8.40e-06)]_4 chr12:56115376-56115876 4.02e-04 20_[+4(9.45e-07)]_68 chr19:40831741-40832241 7.53e-02 100 chr16:1826963-1827463 1.76e-01 36_[-9(7.85e-06)]_48 chr16:15590846-15591346 1.26e-01 70_[+8(6.03e-05)]_23 chr21:29217765-29218265 3.43e-01 100 chr20:50113559-50114059 1.24e-27 9_[-1(5.03e-14)]_5_[-2(2.11e-10)]_\ 10_[-5(6.04e-11)]_10 chr6:33391357-33391857 9.28e-01 100 chr19:4232522-4233022 1.43e-17 1_[+1(5.56e-12)]_5_[+2(2.37e-09)]_1_\ [+1(2.15e-12)]_2_[+1(2.15e-12)]_9 chr1:236604502-236605002 1.54e-05 61_[-4(4.99e-07)]_27 chr19:17482813-17483313 6.67e-14 [+1(7.72e-11)]_1_[+2(9.07e-07)]_\ [+4(5.25e-06)]_1_[+1(1.40e-10)]_2_[+1(1.40e-10)]_2 chr8:37302628-37303128 2.45e-01 100 chrUn_KI270467v1:3053-35 6.46e-27 7_[+6(1.00e-27)]_[+10(5.21e-13)]_22 chr15:67792451-67792951 6.67e-01 100 chr7:148982884-148983384 1.57e-15 48_[-1(1.50e-11)]_30 chr12:124994092-12499459 4.13e-15 12_[-2(8.60e-10)]_3_[-5(9.92e-05)]_\ 41 chr10:75379170-75379670 2.09e-01 100 chr10:116826808-11682730 1.75e-09 50_[+1(1.74e-08)]_28 chr16:23148219-23148719 1.78e-19 24_[+2(3.10e-08)]_1_[+1(2.15e-12)]_\ 37 chr5:1034969-1035469 1.16e-14 2_[+1(1.34e-09)]_1_[+4(7.23e-06)]_1_\ [+1(2.87e-10)]_1_[+2(4.10e-09)]_10_[-3(6.85e-07)]_1 chr1:36384487-36384987 3.07e-19 8_[+1(4.59e-13)]_70 chr17:3890065-3890565 8.23e-01 72_[-8(6.03e-05)]_21 chr13:113296760-11329726 7.06e-01 78_[-9(8.42e-06)]_6 chr1:16122849-16123349 1.16e-01 100 chrX:101407978-101408478 2.55e-02 15_[+9(2.95e-06)]_69 chr6:82260144-82260644 5.65e-01 100 chr2:231677640-231678140 2.05e-11 31_[+3(1.12e-07)]_6_[-5(1.24e-06)]_\ 23 chr10:124355060-12435556 1.82e-17 8_[+5(5.42e-05)]_5_[+2(2.11e-10)]_\ 43 chr13:110965217-11096571 6.91e-03 11_[-8(6.03e-05)]_10_[-8(6.03e-05)]_\ 21_[-8(6.03e-05)]_10_[-8(6.03e-05)]_20 chr7:139778225-139778725 3.00e-15 55_[+1(4.81e-11)]_23 chr19:40549391-40549891 5.68e-15 1_[-4(3.86e-05)]_5_[-1(1.34e-09)]_\ 13_[-1(2.65e-07)]_9_[-2(1.50e-08)] chr17:60173312-60173812 3.27e-01 100 chr12:65630573-65631073 1.08e-21 57_[+1(5.03e-14)]_21 chr16:22948800-22949300 7.55e-20 20_[-4(1.85e-06)]_13_[-1(5.03e-14)]_\ 33 chr10:75358958-75359458 8.89e-05 31_[-2(2.44e-06)]_53 chr9:132990075-132990575 2.91e-15 7_[-1(1.09e-09)]_9_[-4(2.74e-07)]_1_\ [-1(3.66e-10)]_2_[-1(5.55e-08)]_3 chr19:40348279-40348779 1.19e-01 33_[+9(1.40e-06)]_29_[+9(7.75e-08)]_\ 6 chr2:173414948-173415448 3.15e-20 33_[-1(8.68e-13)]_17_[-1(2.08e-06)]_\ 6 chr1:36397784-36398284 2.96e-07 45_[-4(7.23e-07)]_3_[-2(3.97e-05)]_\ 24 chr3:194089421-194089921 7.07e-02 1_[-4(2.16e-05)]_87 chr5:113513310-113513810 1.20e-07 [+1(3.90e-07)]_11_[-3(3.75e-06)]_55 chr15:74781508-74782008 5.60e-15 48_[+2(2.11e-10)]_36 chr1:234700131-234700631 4.74e-05 68_[-8(6.03e-05)]_25 chr1:41870060-41870560 5.82e-21 10_[-1(9.77e-10)]_1_[-2(1.46e-05)]_\ 1_[-5(5.18e-09)]_22 chr20:63543699-63544199 5.16e-18 5_[+1(6.44e-12)]_12_[+2(8.51e-08)]_\ 6_[+1(2.00e-12)]_1_[+4(1.16e-05)]_4 chr10:132329852-13233035 3.77e-06 26_[-4(2.08e-06)]_62 chr17:74514097-74514597 3.03e-02 30_[+9(1.40e-06)]_1_[+9(6.05e-07)]_\ 16_[+9(1.54e-06)]_5 chr20:63056827-63057327 3.15e-17 1_[+3(5.13e-06)]_7_[-1(2.03e-10)]_\ 13_[-4(3.87e-07)]_1_[-1(3.44e-12)]_10 chr19:1267230-1267730 4.97e-25 3_[+5(7.28e-10)]_10_[+1(5.03e-14)]_\ 37 chr12:96061775-96062275 2.62e-17 23_[+1(3.03e-12)]_55 chr19:841255-841755 5.82e-17 5_[+2(1.76e-08)]_5_[+1(1.23e-12)]_\ 10_[+1(5.20e-12)]_1_[+2(7.13e-09)]_3 chr6:24359556-24360056 2.15e-17 14_[+1(3.44e-12)]_64 chr1:18602351-18602851 3.15e-20 3_[-3(5.68e-08)]_7_[+1(3.03e-12)]_6_\ [+1(2.05e-13)]_10_[-3(5.68e-08)]_6 chr22:37677206-37677706 5.17e-14 32_[-1(5.08e-09)]_24_[-2(1.87e-06)]_\ 6 chr9:133734153-133734653 6.36e-19 [+3(5.68e-08)]_3_[-1(2.05e-13)]_1_\ [-4(6.11e-07)]_1_[-1(1.02e-13)]_2_[-1(2.05e-13)]_3 chr17:80980639-80981139 1.73e-12 16_[+2(4.73e-08)]_5_[+1(6.84e-11)]_\ 10_[+1(6.15e-07)]_9 chr8:99323749-99324249 4.16e-07 46_[+1(5.70e-07)]_32 chr19:40219784-40220284 5.55e-11 29_[+8(6.03e-05)]_22_[+8(6.03e-05)]_\ 20_[-3(2.27e-07)]_3 chr13:46052774-46053274 2.90e-11 76_[-1(1.39e-07)]_2 chr19:49158344-49158844 5.59e-20 41_[-1(5.03e-14)]_1_[-2(2.37e-09)]_\ 20 chr17:8631441-8631941 2.29e-13 78_[-1(5.13e-10)] chr19:3500826-3501326 1.80e-13 26_[-1(1.45e-08)]_52 chr1:234723925-234724425 5.48e-02 16_[+1(3.10e-05)]_32_[-3(4.52e-05)]_\ 18 chr10:93209023-93209523 6.47e-02 100 chr20:49713990-49714490 5.46e-20 55_[-1(5.03e-14)]_11_[+3(1.03e-05)] chrUn_KI270467v1:2010-25 5.22e-26 15_[+10(7.13e-13)]_12_\ [+6(5.69e-28)]_2 chr19:3185110-3185610 5.88e-07 1_[-4(1.10e-07)]_87 chr17:75105477-75105977 1.66e-03 38_[+4(2.53e-06)]_50 chr6:52243254-52243754 2.82e-03 35_[-4(1.40e-06)]_53 chr2:27719851-27720351 7.46e-11 [+1(1.45e-08)]_78 chr7:2314679-2315179 6.45e-11 [-1(1.39e-07)]_2_[-1(2.79e-09)]_3_\ [+3(5.59e-06)]_20_[+3(4.02e-07)]_7 chr10:125973158-12597365 1.17e-09 1_[+7(2.96e-07)]_6_[-4(9.45e-07)]_\ 33_[+8(6.03e-05)]_19 chr1:10833914-10834414 1.09e-18 11_[-1(1.23e-12)]_10_[-1(7.94e-12)]_\ 6_[-1(6.34e-10)]_7 chr15:70494070-70494570 2.10e-02 [+3(8.76e-06)]_88 chr12:93442112-93442612 3.19e-12 9_[-1(1.10e-08)]_7_[-1(1.13e-05)]_\ 40 chr3:197298666-197299166 7.35e-19 64_[-4(4.20e-05)]_1_[-1(2.45e-12)]_\ 1 chr6:87155289-87155789 1.95e-01 20_[-9(7.49e-07)]_17_[-9(4.56e-06)]_\ 31 chr15:67139175-67139675 1.05e-02 52_[-4(3.15e-06)]_36 chr4:152536433-152536933 5.52e-19 72_[+1(3.07e-13)]_6 chr5:73394047-73394547 4.73e-12 16_[-4(1.16e-05)]_1_[-1(2.51e-08)]_\ 49 chr19:40920927-40921427 1.27e-01 69_[+8(6.03e-05)]_24 chr6:28942009-28942509 7.92e-20 16_[+2(3.83e-07)]_9_[+1(5.03e-14)]_\ 37 chr16:778815-779315 3.18e-17 4_[-2(4.76e-09)]_1_[-1(1.23e-12)]_\ 11_[-2(1.49e-07)]_7_[-1(1.23e-12)]_1 chr17:77233776-77234276 9.87e-01 100 chr6:44265549-44266049 7.00e-20 1_[-2(2.33e-07)]_1_[-1(5.03e-14)]_\ 28_[-4(7.23e-06)]_20 chr15:72375773-72376273 3.29e-01 25_[-9(1.46e-05)]_35_[-9(2.72e-06)]_\ 8 chr1:1308062-1308562 1.29e-10 65_[+1(8.73e-10)]_13 chr1:155244577-155245077 2.76e-01 26_[+1(1.73e-05)]_8_[+1(1.73e-05)]_\ 22 chr9:136579540-136580040 5.20e-15 [-1(2.86e-11)]_10_[-1(7.72e-11)]_2_\ [-1(4.07e-10)]_3_[+3(2.85e-07)]_7 chr17:7013093-7013593 7.54e-02 47_[+4(1.72e-05)]_41 chr1:40476819-40477319 5.93e-19 8_[+1(5.03e-14)]_1_[+2(1.44e-08)]_\ 53 chrUn_KI270467v1:2854-33 3.88e-25 4_[+10(4.68e-14)]_12_[+6(3.11e-25)]_\ 13 chr17:78558312-78558812 2.75e-01 100 chr3:72887617-72888117 3.67e-16 47_[+2(1.50e-06)]_13_[+1(4.81e-11)]_\ 2 chr19:4197621-4198121 1.00e-16 16_[+4(3.50e-05)]_5_[+1(1.50e-09)]_\ 1_[+4(4.99e-07)]_5_[+1(1.95e-11)]_5 chr19:4815149-4815649 1.20e-18 3_[-1(4.32e-12)]_9_[-2(4.28e-10)]_8_\ [-4(5.41e-08)]_5_[-1(6.14e-13)]_3 chr19:10194953-10195453 1.37e-15 37_[-1(1.95e-11)]_41 chr17:76264673-76265173 1.00e-07 38_[+1(1.28e-07)]_40 chr15:74790435-74790935 1.90e-15 75_[-1(2.30e-10)]_3 chr16:1308283-1308783 6.17e-11 5_[+1(3.78e-09)]_1_[+2(3.10e-08)]_5_\ [+1(2.51e-08)]_6_[+1(3.14e-06)]_1 chr8:140464070-140464570 3.38e-16 20_[+2(1.39e-05)]_2_[+1(2.24e-11)]_\ 40 chr7:101165591-101166091 6.56e-16 2_[+1(8.51e-11)]_25_[+4(1.10e-07)]_\ 14_[+1(3.08e-09)]_3 chr7:128862397-128862897 3.70e-14 20_[+4(4.99e-07)]_9_[+1(6.84e-11)]_\ 37 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: indra ********************************************************************************