# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 TTTATTTATTTATTTATTTATT MEME-1 TTTATTTATTTATTTATTTATT 7.4e-286 9.9e-289 -663.15 0.0 37 479 298 327 0.07724 4.1e-291 239 1 TATTTATTTATTTATT MEME-2 TATTTATTTATTTATT 7.4e-274 9.9e-277 -635.52 0.0 43 485 303 332 0.08866 4.1e-279 242 1 AGYGAGACTCYGTCTC MEME-3 AGYGAGACTCYGTCTC 5.2e-056 7.1e-059 -133.90 0.0 91 485 207 353 0.18763 2.9e-061 242 2 TAAATAAA DREME-1 TAAATAAA 1.9e-242 2.6e-245 -563.18 0.0 49 493 306 357 0.09939 1.1e-247 246 2 CYRTCTC DREME-2 CYGTCTC 1.6e-015 2.2e-018 -40.66 0.0 84 494 133 352 0.17004 8.9e-021 246 2 AGYGARAC DREME-3 AGYGAGAC 1.1e-025 1.5e-028 -64.07 0.0 99 493 99 159 0.20081 6.1e-031 246 2 CTGKC DREME-4 CTGKC 1.9e-003 2.6e-006 -12.88 0.0 110 496 181 556 0.22177 1.0e-008 247 2 AGTYTTGC DREME-6 AGTCTTGC 2.5e-014 3.4e-017 -37.91 0.0 97 493 103 219 0.19675 1.4e-019 246 2 GAGAC DREME-7 GAGAC 1.1e-002 1.5e-005 -11.12 0.0 92 496 127 438 0.18548 6.0e-008 247 3 M0104_1.02 (ARID3B)_(Mus_musculus)_(DBD_0.99) AWATTAATWAN 2.5e-038 3.3e-041 -93.21 0.0 60 490 190 538 0.12245 1.4e-043 244 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 2.0e-008 2.7e-011 -24.32 0.0 60 492 127 532 0.12195 1.1e-013 245 3 M0398_1.02 (ZSCAN10)_(Mus_musculus)_(DBD_0.82) NGKRAGTGCNN 2.6e-010 3.4e-013 -28.70 0.0 142 490 253 564 0.28980 1.4e-015 244 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 3.1e-071 4.2e-074 -168.96 0.0 55 491 240 581 0.11202 1.7e-076 245 3 M0437_1.02 (ZNF32)_(Mus_musculus)_(DBD_0.99) TATRTATRT 2.1e-076 2.8e-079 -180.88 0.0 50 492 209 468 0.10163 1.1e-081 245 3 M0442_1.02 (ZBTB3)_(Mus_musculus)_(DBD_1.00) NNTGCAGYG 9.6e-012 1.3e-014 -31.98 0.0 214 492 360 595 0.43496 5.3e-017 245 3 M0633_1.02 DMRT2 KAATKTATWN 9.1e-093 1.2e-095 -218.54 0.0 47 491 242 550 0.09572 5.0e-098 245 3 M0718_1.02 FOXK1 DNRTMAACAH 4.7e-022 6.3e-025 -55.73 0.0 51 491 154 588 0.10387 2.6e-027 245 3 M0719_1.02 FOXG1 RTAAACAW 2.1e-031 2.8e-034 -77.27 0.0 47 493 161 572 0.09533 1.1e-036 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 3.1e-068 4.2e-071 -162.04 0.0 47 489 220 585 0.09611 1.7e-073 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 5.3e-025 7.1e-028 -62.51 0.0 51 493 159 585 0.10345 2.9e-030 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 9.1e-142 1.2e-144 -331.37 0.0 47 491 301 580 0.09572 5.0e-147 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 3.7e-107 5.0e-110 -251.68 0.0 61 491 299 588 0.12424 2.0e-112 245 3 M0756_1.02 (FOXN3)_(Strongylocentrotus_purpuratus)_(DBD_0.44) NNHMACANN 5.2e0000 7.0e-003 -4.96 0.0 112 492 160 524 0.22764 2.9e-005 245 3 M0896_1.02 VENTX TTAATTAG 8.7e-026 1.2e-028 -64.32 0.0 51 493 154 550 0.10345 4.7e-031 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 2.8e-006 3.7e-009 -19.40 0.0 71 491 139 548 0.14460 1.5e-011 245 3 M0906_1.02 (VTN)_(Mus_musculus)_(DBD_0.79) NMTTAATTAR 1.2e-020 1.6e-023 -52.46 0.0 49 491 136 520 0.09980 6.7e-026 245 3 M0931_1.02 (LHX1)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 6.1e0000 8.2e-003 -4.81 0.0 458 492 516 531 0.93089 3.3e-005 245 3 M1030_1.02 (NKX2-3)_(Mus_musculus)_(DBD_1.00) NVYACTTVD 2.7e-001 3.6e-004 -7.92 0.0 290 492 407 595 0.58943 1.5e-006 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 1.0e-001 1.4e-004 -8.91 0.0 113 491 170 524 0.23014 5.5e-007 245 3 M1528_1.02 (RFX6)_(Mus_musculus)_(DBD_0.66) NCNTRGYWAC 7.6e-001 1.0e-003 -6.88 0.0 139 491 217 589 0.28310 4.2e-006 245 3 M1582_1.02 (HMG20B)_(Mus_musculus)_(DBD_0.94) NWAWATAATWN 1.3e-045 1.7e-048 -109.99 0.0 46 490 174 527 0.09388 7.0e-051 244 3 M1583_1.02 (BBX)_(Mus_musculus)_(DBD_0.99) TTCATTGA 3.0e-002 4.1e-005 -10.11 0.0 201 493 249 475 0.40771 1.7e-007 246 3 M1668_1.02 PRKRIR NYCVNVSKRNNN 1.6e0000 2.2e-003 -6.13 0.0 131 489 205 588 0.26789 9.0e-006 244 3 M1882_1.02 IRF1 AAANHGAAAGTGAAASYRRRN 4.0e-001 5.3e-004 -7.54 0.0 92 480 138 497 0.19167 2.2e-006 239 3 M1884_1.02 MEF2A DKCTAAAAATAGMHH 5.2e-003 7.0e-006 -11.87 0.0 66 486 120 541 0.13580 2.9e-008 242 3 M2283_1.02 FOXP1 HWWADGTAAACAAAR 3.1e-073 4.1e-076 -173.58 0.0 52 486 237 579 0.10700 1.7e-078 242 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 1.7e-049 2.2e-052 -118.93 0.0 60 488 209 541 0.12295 9.2e-055 243 3 M2385_1.02 FOXP2 RWGTAAACAVR 1.6e-059 2.1e-062 -142.01 0.0 42 490 194 569 0.08571 8.7e-065 244 3 M2387_1.02 SREBF1 RTGGGGTGAB 2.6e0000 3.5e-003 -5.65 0.0 253 491 332 549 0.51527 1.4e-005 245 3 M2388_1.02 SREBF2 RTGGGGTGAY 1.2e0000 1.7e-003 -6.39 0.0 253 491 339 557 0.51527 6.9e-006 245 3 M4452_1.02 BATF TYYYRWWATGASTCA 2.6e-005 3.5e-008 -17.18 0.0 88 486 157 534 0.18107 1.4e-010 242 3 M4459_1.02 EGR1 SBGCGKGGGCGGVRGSGSGG 9.9e0000 1.3e-002 -4.32 0.0 333 481 376 487 0.69231 5.6e-005 240 3 M4467_1.02 MEF2C DDKCYAAAAATAGMH 4.2e-010 5.6e-013 -28.21 0.0 72 486 155 559 0.14815 2.3e-015 242 3 M4471_1.02 PAX5 BCAGYSRAGCGTGAC 1.1e0000 1.5e-003 -6.49 0.0 354 486 449 555 0.72840 6.3e-006 242 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 3.3e-003 4.5e-006 -12.31 0.0 276 486 359 523 0.56790 1.9e-008 242 3 M4551_1.02 ZNF274 YTCAYACTGGAGAGAAA 2.9e-013 3.9e-016 -35.47 0.0 140 484 165 314 0.28926 1.6e-018 241 3 M4565_1.02 FOSL2 VDGGATGASTCAYH 1.7e-002 2.2e-005 -10.71 0.0 289 487 347 490 0.59343 9.2e-008 243 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 8.6e-080 1.2e-082 -188.67 0.0 54 486 250 581 0.11111 4.8e-085 242 3 M4572_1.02 MAFF TGCTGACTCAGCAWW 4.0e-005 5.4e-008 -16.74 0.0 278 486 327 457 0.57202 2.2e-010 242 3 M4612_1.02 CTCFL CCRSCAGGGGGCGCY 4.1e-001 5.5e-004 -7.50 0.0 252 486 270 428 0.51852 2.3e-006 242 3 M4619_1.02 FOSL1 BGGTGASTCAT 1.2e0000 1.6e-003 -6.45 0.0 336 490 382 492 0.68571 6.5e-006 244 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 3.8e-001 5.1e-004 -7.58 0.0 276 484 299 440 0.57025 2.1e-006 241 3 M4636_1.02 THAP1 YTGCCCDBANYMAAGATGGCG 7.8e-001 1.0e-003 -6.86 0.0 228 480 163 266 0.47500 4.4e-006 239 3 M4681_1.02 BACH2 TGCTGAGTCA 1.2e-002 1.6e-005 -11.02 0.0 279 491 326 474 0.56823 6.7e-008 245 3 M4698_1.02 HNF4A BTGRMCTTTGVHCYB 3.0e-001 4.1e-004 -7.81 0.0 164 486 241 555 0.33745 1.7e-006 242 3 M5284_1.02 ALX3 BNTAATTRGY 1.5e0000 2.0e-003 -6.20 0.0 423 491 494 535 0.86151 8.3e-006 245 3 M5287_1.02 ALX4 HTAATYNAATTAN 5.3e-134 7.1e-137 -313.49 0.0 44 488 273 529 0.09016 2.9e-139 243 3 M5291_1.02 ARX YTAATTNRATTAN 5.0e-159 6.7e-162 -371.11 0.0 42 488 288 514 0.08607 2.8e-164 243 3 M5294_1.02 BARHL2 NHTAAAYGNY 1.4e-018 1.8e-021 -47.75 0.0 65 491 167 570 0.13238 7.5e-024 245 3 M5300_1.02 BARX1 TAATBGNTWTTTAATBG 7.5e-005 1.0e-007 -16.10 0.0 50 484 83 399 0.10331 4.2e-010 241 3 M5322_1.02 CPEB1 TTTTTATT 2.0e-022 2.7e-025 -56.58 0.0 67 493 180 577 0.13590 1.1e-027 246 3 M5335_1.02 CUX2 ATCGATAHNDTTATYGAT 2.8e-228 3.7e-231 -530.59 0.0 41 483 284 353 0.08489 1.5e-233 241 3 M5339_1.02 DLX1 NNTAATTRNN 4.3e-001 5.8e-004 -7.45 0.0 395 491 487 554 0.80448 2.4e-006 245 3 M5348_1.02 DRGX NTAATYHAATTAN 3.9e-106 5.2e-109 -249.33 0.0 48 488 252 519 0.09836 2.1e-111 243 3 M5388_1.02 EMX2 NYTAATTAVB 5.5e0000 7.3e-003 -4.91 0.0 405 491 457 514 0.82485 3.0e-005 245 3 M5414_1.02 ESX1 DNTAATTRRN 8.3e0000 1.1e-002 -4.49 0.0 431 491 515 554 0.87780 4.6e-005 245 3 M5425_1.02 ETV6 CCGGAASCGGAAGYR 1.8e-001 2.4e-004 -8.34 0.0 280 486 253 362 0.57613 9.8e-007 242 3 M5435_1.02 FOXB1 TCGCYGTGTCATTC 2.7e0000 3.6e-003 -5.62 0.0 143 487 167 428 0.29363 1.5e-005 243 3 M5445_1.02 FOXD2 DRTMAATATTWDYD 7.6e-003 1.0e-005 -11.49 0.0 47 487 90 515 0.09651 4.2e-008 243 3 M5446_1.02 FOXD4L2 RTAAACA 5.1e-094 6.9e-097 -221.42 0.0 50 494 259 589 0.10121 2.8e-099 246 3 M5460_1.02 FOXL1 RTAAACA 2.0e-118 2.6e-121 -277.64 0.0 50 494 285 584 0.10121 1.1e-123 246 3 M5481_1.02 GBX2 NYTAATTRSB 5.9e-001 7.9e-004 -7.14 0.0 475 491 537 539 0.96741 3.2e-006 245 3 M5541_1.02 HOXB2 NNTAATKANN 7.1e0000 9.6e-003 -4.65 0.0 407 491 491 552 0.82892 3.9e-005 245 3 M5544_1.02 HOXC10 DTTTWATKDB 1.1e-028 1.5e-031 -70.95 0.0 69 491 196 575 0.14053 6.3e-034 245 3 M5553_1.02 HOXC13 CYAATAAAAH 7.4e-003 9.9e-006 -11.52 0.0 69 491 126 559 0.14053 4.1e-008 245 3 M5555_1.02 HOXD11 RTCGTAAAAH 5.4e-002 7.3e-005 -9.53 0.0 73 491 112 473 0.14868 3.0e-007 245 3 M5584_1.02 ISX YTAATCTAATTAR 1.0e-126 1.4e-129 -296.73 0.0 42 488 246 470 0.08607 5.6e-132 243 3 M5604_1.02 LMX1A YTAATTAA 9.2e-023 1.2e-025 -57.35 0.0 53 493 150 541 0.10751 5.0e-028 246 3 M5605_1.02 LMX1B TTAATTRN 3.8e-022 5.1e-025 -55.93 0.0 53 493 151 552 0.10751 2.1e-027 246 3 M5621_1.02 MEIS3 SCTGTCAH 3.4e-001 4.5e-004 -7.70 0.0 109 493 179 590 0.22110 1.8e-006 246 3 M5635_1.02 MNX1 TTTAATTRNH 4.2e-018 5.6e-021 -46.63 0.0 59 491 153 552 0.12016 2.3e-023 245 3 M5637_1.02 MSX1 TAATTGSWWTTTAATTRS 3.8e-058 5.2e-061 -138.82 0.0 51 483 192 480 0.10559 2.1e-063 241 3 M5697_1.02 ONECUT3 DTTATYGATTTTTY 5.5e-139 7.3e-142 -324.97 0.0 57 487 302 512 0.11704 3.0e-144 243 3 M5711_1.02 PAX9 KKCASTCAWGCGTGACS 5.4e-002 7.3e-005 -9.52 0.0 180 484 117 215 0.37190 3.0e-007 241 3 M5714_1.02 PHOX2A TAATYYAATTA 4.6e-076 6.3e-079 -180.07 0.0 46 490 214 526 0.09388 2.6e-081 244 3 M5715_1.02 PHOX2B TAATYYAATTA 2.6e-071 3.5e-074 -169.14 0.0 40 490 197 532 0.08163 1.4e-076 244 3 M5740_1.02 POU4F1 ATGMATAATTAATG 2.4e-150 3.2e-153 -351.12 0.0 39 487 275 522 0.08008 1.3e-155 243 3 M5743_1.02 POU4F3 RTGMATWATTAATGAV 2.3e-141 3.1e-144 -330.43 0.0 43 485 275 517 0.08866 1.3e-146 242 3 M5753_1.02 PROX1 YAAGACGYCTTA 1.5e-003 2.0e-006 -13.13 0.0 93 489 91 270 0.19018 8.2e-009 244 3 M5777_1.02 RFX4 NGTWRCCATGGYWACS 3.3e-001 4.4e-004 -7.72 0.0 453 485 386 392 0.93402 1.8e-006 242 3 M5941_1.02 UNCX NTAATYBAATTAN 3.8e-048 5.1e-051 -115.80 0.0 56 488 202 548 0.11475 2.1e-053 243 3 M5974_1.02 ZNF524 GGGTTCRAGGGT 3.9e-001 5.3e-004 -7.55 0.0 255 489 280 443 0.52147 2.2e-006 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 3.0e-118 4.0e-121 -277.21 0.0 61 491 309 580 0.12424 1.7e-123 245 3 M6139_1.02 AHR KCACGCRAH 6.1e-003 8.2e-006 -11.72 0.0 354 492 442 538 0.71951 3.3e-008 245 3 M6141_1.02 ALX1 TAATBYAATTAY 1.1e-027 1.5e-030 -68.71 0.0 55 489 164 540 0.11247 5.9e-033 244 3 M6147_1.02 ARID3A TWWAWTTTGATWYYVWTTAATH 1.4e-160 1.9e-163 -374.69 0.0 47 479 301 509 0.09812 7.9e-166 239 3 M6187_1.02 DDIT3 GGGGATTGCABBB 2.6e-005 3.6e-008 -17.15 0.0 226 488 339 568 0.46311 1.5e-010 243 3 M6189_1.02 DLX3 GMTAATTRSW 2.6e0000 3.5e-003 -5.67 0.0 397 491 458 521 0.80855 1.4e-005 245 3 M6212_1.02 EPAS1 CMCACGYAYDCAC 9.7e-001 1.3e-003 -6.65 0.0 346 488 397 498 0.70902 5.3e-006 243 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 6.1e-126 8.3e-129 -294.92 0.0 62 488 321 581 0.12705 3.4e-131 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 3.5e-069 4.7e-072 -164.23 0.0 52 486 223 544 0.10700 2.0e-074 242 3 M6236_1.02 FOXC2 YCTRDSWAAACAAAC 5.7e-004 7.6e-007 -14.08 0.0 394 486 477 528 0.81070 3.2e-009 242 3 M6237_1.02 FOXD3 AAACAAACA 2.9e-104 3.8e-107 -245.03 0.0 50 492 269 582 0.10163 1.6e-109 245 3 M6238_1.02 FOXF1 WAAATAAACAW 1.3e-144 1.7e-147 -337.95 0.0 60 490 332 572 0.12245 6.9e-150 244 3 M6239_1.02 FOXF2 HWADGTAAACA 1.3e-115 1.8e-118 -271.12 0.0 62 490 305 569 0.12653 7.3e-121 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 3.4e-166 4.6e-169 -387.60 0.0 39 491 303 578 0.07943 1.9e-171 245 3 M6242_1.02 FOXJ3 TAAACAWWAAMMA 5.9e-082 8.0e-085 -193.64 0.0 52 488 242 556 0.10656 3.3e-087 243 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 8.9e-096 1.2e-098 -225.48 0.0 60 488 285 591 0.12295 4.9e-101 243 3 M6245_1.02 FOXO1 AAAWWVWAAACAAVHH 1.9e-098 2.5e-101 -231.65 0.0 57 485 280 581 0.11753 1.0e-103 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 6.9e-098 9.3e-101 -230.33 0.0 52 488 270 593 0.10656 3.8e-103 243 3 M6247_1.02 FOXO4 MRTAAACAA 3.1e-045 4.2e-048 -109.10 0.0 56 492 204 584 0.11382 1.7e-050 245 3 M6250_1.02 FOXQ1 AAATAAACAATD 3.9e-107 5.2e-110 -251.64 0.0 53 489 267 534 0.10838 2.1e-112 244 3 M6262_1.02 GFI1B WGCMGTGATTT 2.4e0000 3.3e-003 -5.72 0.0 306 490 402 566 0.62449 1.4e-005 244 3 M6269_1.02 HBP1 AYYCATTGA 9.7e0000 1.3e-002 -4.34 0.0 238 492 320 565 0.48374 5.4e-005 245 3 M6281_1.02 HNF1A KGKTAAWBATTAACY 7.7e-009 1.0e-011 -25.29 0.0 36 486 91 526 0.07407 4.3e-014 242 3 M6282_1.02 HNF1B GTTAAWYATTAACY 1.2e-010 1.6e-013 -29.47 0.0 47 487 115 540 0.09651 6.5e-016 243 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 6.4e-133 8.7e-136 -310.99 0.0 61 487 309 528 0.12526 3.6e-138 243 3 M6289_1.02 HOXA9 WCATAAAYYRTH 1.6e-035 2.2e-038 -86.73 0.0 53 489 177 553 0.10838 8.8e-041 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 1.6e-001 2.1e-004 -8.46 0.0 320 490 420 562 0.65306 8.7e-007 244 3 M6292_1.02 HOXA5 CATTAATYAR 3.1e-007 4.1e-010 -21.61 0.0 49 491 109 542 0.09980 1.7e-012 245 3 M6293_1.02 HOXA7 KCCAATCKATYGAKB 1.1e0000 1.5e-003 -6.48 0.0 260 486 353 563 0.53498 6.4e-006 242 3 M6296_1.02 HOXB6 KKCATMAATCAWT 2.2e-009 3.0e-012 -26.55 0.0 78 488 120 373 0.15984 1.2e-014 243 3 M6297_1.02 HOXB7 MATYAATCAA 4.4e-117 5.9e-120 -274.53 0.0 43 491 249 510 0.08758 2.4e-122 245 3 M6298_1.02 HOXB8 BMATTAATCAA 1.8e-097 2.5e-100 -229.35 0.0 48 490 240 512 0.09796 1.0e-102 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 2.7e-177 3.6e-180 -413.18 0.0 50 486 302 451 0.10288 1.5e-182 242 3 M6301_1.02 HOXD10 AATTAAARCA 2.7e-019 3.7e-022 -49.36 0.0 69 491 176 571 0.14053 1.5e-024 245 3 M6302_1.02 HOXD13 TCYCTAATAAA 3.8e-001 5.1e-004 -7.59 0.0 68 490 121 575 0.13878 2.1e-006 244 3 M6304_1.02 HOXD9 HMATNAAWYT 3.5e-005 4.7e-008 -16.87 0.0 75 491 140 546 0.15275 1.9e-010 245 3 M6312_1.02 IRF7 GAAASYGAAA 6.5e-002 8.8e-005 -9.34 0.0 93 491 161 585 0.18941 3.6e-007 245 3 M6322_1.02 KLF1 CAGGGTGKGGC 4.2e0000 5.7e-003 -5.17 0.0 462 490 544 555 0.94286 2.3e-005 244 3 M6323_1.02 KLF3 HRCYWGGGTGKGGCT 4.8e0000 6.4e-003 -5.05 0.0 350 486 427 535 0.72016 2.7e-005 242 3 M6328_1.02 LHX2 YRSDTKYAATWAG 4.1e-001 5.5e-004 -7.51 0.0 240 488 310 522 0.49180 2.2e-006 243 3 M6329_1.02 LHX3 AAAATTAATTARY 6.3e-083 8.4e-086 -195.89 0.0 58 488 240 501 0.11885 3.5e-088 243 3 M6342_1.02 MEF2D BCTAWAAATAGC 3.2e-002 4.3e-005 -10.05 0.0 417 489 497 537 0.85276 1.8e-007 244 3 M6348_1.02 MTF1 MGKGCCGTGTGCAAADS 1.8e-008 2.4e-011 -24.46 0.0 144 484 198 421 0.29752 9.9e-014 241 3 M6378_1.02 NKX3-1 WWTAAGTATWTWW 1.2e-168 1.6e-171 -393.29 0.0 46 488 313 537 0.09426 6.5e-174 243 3 M6399_1.02 ONECUT2 DKSWTKWTATKGATTTTWYYT 1.4e-164 1.9e-167 -383.90 0.0 50 480 309 500 0.10417 7.9e-170 239 3 M6401_1.02 OTX2 HYYTAATCCBWKHDM 4.5e-001 6.1e-004 -7.40 0.0 320 486 403 537 0.65844 2.5e-006 242 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 6.3e-056 8.4e-059 -133.72 0.0 54 486 215 571 0.11111 3.5e-061 242 3 M6417_1.02 POU1F1 RWATATTCATKAR 1.7e-031 2.3e-034 -77.45 0.0 50 488 165 556 0.10246 9.5e-037 243 3 M6418_1.02 PITX2 DBTAATCCMA 5.8e0000 7.9e-003 -4.85 0.0 311 491 417 585 0.63340 3.2e-005 245 3 M6426_1.02 POU3F2 CATRAATWWT 1.3e-117 1.7e-120 -275.79 0.0 49 491 278 567 0.09980 6.9e-123 245 3 M6438_1.02 PROP1 RASHAATTAAHWTVR 7.4e-030 9.9e-033 -73.69 0.0 76 486 207 558 0.15638 4.1e-035 242 3 M6442_1.02 PURA CCMBGCCCNCCMMYWCC 1.8e0000 2.5e-003 -6.01 0.0 330 484 437 573 0.68182 1.0e-005 241 3 M6471_1.02 SOX13 YATTGTTY 1.8e-001 2.4e-004 -8.33 0.0 63 493 115 580 0.12779 9.8e-007 246 3 M6510_1.02 TEF TGTTTATRTAAMTK 7.9e-039 1.1e-041 -94.34 0.0 61 487 199 561 0.12526 4.4e-044 243 3 M6515_1.02 TFDP1 AWWKRGCGGGAAAY 4.9e-001 6.6e-004 -7.33 0.0 407 487 402 441 0.83573 2.7e-006 243 3 M6534_1.02 VSX2 WDAGCTAATTA 7.7e0000 1.0e-002 -4.57 0.0 384 490 395 461 0.78367 4.3e-005 244 3 M6542_1.02 ZBTB6 VGRTGATRGAGCC 6.2e-001 8.3e-004 -7.09 0.0 226 488 291 516 0.46311 3.4e-006 243 3 M6546_1.02 ZFHX3 ATTAWTAATTA 1.8e-150 2.5e-153 -351.40 0.0 50 490 295 503 0.10204 1.0e-155 244 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).