Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
AGCARTAYACCT | 12 | AGCAATATACCT |
TTYASCTGGCARGG | 14 | TTCACCTGGCAAGG |
TAAGGCCCACCAGAAGC | 17 | TAAGGCCCACCAGAAGC |
TACCCCTGAGGTAGGACAGTRA | 22 | TACCCCTGAGGTAGGACAGTGA |
CCTTTTTCTCCATTCCTGTCCA | 22 | CCTTTTTCTCCATTCCTGTCCA |
ACCAGAAGCARTTTGC | 16 | ACCAGAAGCAATTTGC |
TATCAACTCTCC | 12 | TATCAACTCTCC |
RCTTTGTCATGGCAGCCCTAGCARACK | 27 | GCTTTGTCATGGCAGCCCTAGCAAACT |
GGACAGGAATGG | 12 | GGACAGGAATGG |
CTGAGGTARGACAGTR | 16 | CTGAGGTAGGACAGTA |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.273 C 0.227 G 0.227 T 0.273
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr10 | + | 48635051 | 48635077 | 3.78e-15 | 6.62e-10 | gctttgtcatggcagcccgagcagact |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 225605949 | 225605975 | 4.78e-15 | 6.62e-10 | attttgtcatggcagccctagcaaact |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 7383470 | 7383496 | 4.78e-15 | 6.62e-10 | ACTTTGTCATGACAGCCCTAGCAAACT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr9 | + | 89221061 | 89221087 | 5.06e-15 | 6.62e-10 | gctttgtcatggcagccccagcaaagg |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | + | 61094869 | 61094895 | 6.05e-15 | 6.62e-10 | gcttggtcttggcagccctagcagact |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | - | 7689396 | 7689422 | 7.01e-15 | 6.62e-10 | ACTTTGTCATGGCAACCCTAGCAAACG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | - | 44718228 | 44718254 | 1e-14 | 7.77e-10 | ACTTTGACATGGCAGCCCTAGCAAACT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | - | 15011151 | 15011177 | 1.1e-14 | 7.77e-10 | GCTTTGTCGTGGCAGCCCTAGCAAACC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr9 | - | 90910075 | 90910101 | 2.34e-14 | 1.48e-09 | GCTTTGTCTTGGCAGCCCTATCAGACT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | + | 54178219 | 54178245 | 4.09e-14 | 2.32e-09 | gttttgtcatggcagccctagcagtgt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 1377412 | 1377438 | 1.61e-13 | 8.29e-09 | gctttgtcttggcagccatagcagatg |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | - | 89119555 | 89119581 | 2.52e-13 | 1.19e-08 | GCTTTGTCATGGCAGCCCTAGCCAACT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 11279720 | 11279746 | 2.85e-13 | 1.24e-08 | gcttggtcatgacagccttagcaaact |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr21 | - | 38461078 | 38461104 | 1.14e-12 | 4.61e-08 | ACATTGTCTTGGCAACCCTAGCAAATG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr10 | - | 72092340 | 72092366 | 2.54e-12 | 9.6e-08 | ACTTTGTTACGGCAGCCCCAGCAATGG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 124625014 | 124625040 | 3.57e-11 | 1.26e-06 | GCTTTGTCACGGTGGCCCTGGCAGTGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr18 | - | 13296302 | 13296328 | 5e-11 | 1.67e-06 | ACTTTGTTAGGACAGCCCTAGCAGATT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr20 | + | 17537016 | 17537042 | 1.62e-10 | 5.09e-06 | gctttgttctggaagccctagcaaacg |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 9981544 | 9981570 | 2.13e-08 | 0.000636 | ACTTTGTCTTGGTAAGCACAGCAGTat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | + | 11417424 | 11417450 | 2.29e-08 | 0.000649 | actttgttgtggaagtcctagaaaact |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr21 | - | 42388012 | 42388038 | 3.52e-08 | 0.000948 | GCTTGGTCCTGGCGGTCACATCAATGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | - | 116541668 | 116541694 | 7.86e-08 | 0.00202 | GCTTTGTCATGGAAACCACCACAATGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 43252742 | 43252768 | 1.1e-07 | 0.00271 | GCTTTGACTTGGCAGTGACAGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr10 | + | 118106683 | 118106709 | 1.15e-07 | 0.00271 | GCTTGGTCTTGGCGACCCTTCCAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 2261599 | 2261625 | 1.4e-07 | 0.00317 | CCTTTGTCATGGCAGCGATAACAATAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 4602184 | 4602210 | 2.44e-07 | 0.00531 | GCTTTGTCCTGGCAGGCCCAATAATGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | - | 6681292 | 6681318 | 2.72e-07 | 0.00571 | ATTTTGTTATTGCAGCCTGAGCTAATA |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | + | 48377789 | 48377815 | 4.13e-07 | 0.00836 | gctttgacctggaagcattaacagagt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 2261599 | 2261625 | 8.44e-07 | 0.0165 | ATATTGTTATCGCTGCCATGACAAAGG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | + | 52205802 | 52205828 | 9.87e-07 | 0.0186 | ACTTGGTCTTGGAAGGCTTTGCAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | - | 44571700 | 44571726 | 1.02e-06 | 0.0186 | GCTTTGCCTTGGTAGGGTAAGCAGATG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr14 | - | 104514339 | 104514365 | 1.06e-06 | 0.0188 | GATTGGTCTTGGCAACCCCCACAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | - | 81582726 | 81582752 | 1.18e-06 | 0.0194 | TCATGGTCTTGGAAACCCAAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr4 | - | 7751152 | 7751178 | 1.19e-06 | 0.0194 | GCTTTCACCTGGCAGGAATAGCAGTGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr21 | + | 38997229 | 38997255 | 1.2e-06 | 0.0194 | GTTCTGTCTTGATAACCACAGCTGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | + | 89436296 | 89436322 | 1.37e-06 | 0.0215 | cttttatcacagcagccacagaaaacc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr13 | - | 45384667 | 45384693 | 1.65e-06 | 0.0252 | GCTTTCACATGGCAGGGACAGCAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 58491578 | 58491604 | 1.83e-06 | 0.0273 | CCGTGGTCTCGGCAACACCAACAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | - | 440248 | 440274 | 2.18e-06 | 0.0316 | GCTTGGTCTTGGTAAGGGCAGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 11168764 | 11168790 | 2.7e-06 | 0.0383 | GCATGGTCATGGTTGGCATAACAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 109252985 | 109253011 | 3.26e-06 | 0.0449 | GCTTTGACACAACATGGTTAGCAATGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 44718228 | 44718254 | 3.33e-06 | 0.0449 | agtttgctagggctgccatgtcaaagt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr9 | - | 133778506 | 133778532 | 4.08e-06 | 0.0536 | GCTTTGACATGGTAGGCGATGCAGCGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr15 | + | 65286059 | 65286085 | 4.32e-06 | 0.0536 | GCGTTGACATGAGGGTGTTAGCAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 18119627 | 18119653 | 4.34e-06 | 0.0536 | GCATTGTCTAGGCAAAGACAACAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | - | 122291385 | 122291411 | 4.39e-06 | 0.0536 | GCTTTTACTTGGCAGGGGTAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 5218637 | 5218663 | 4.53e-06 | 0.0536 | ACTTGGTCCTGGAAACCCTAGTCATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 204755748 | 204755774 | 4.54e-06 | 0.0536 | tctgtgtcatggtagacccagtagggc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 36167880 | 36167906 | 5.49e-06 | 0.0619 | GCTTTTAATTGGCAGACCCAACAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | - | 7566432 | 7566458 | 5.55e-06 | 0.0619 | GCCTTGACTTGGTAGGGCTAACACAGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | - | 64812592 | 64812618 | 5.58e-06 | 0.0619 | GCTTTCACCTGACAGAGCTAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr20 | + | 62145730 | 62145756 | 5.84e-06 | 0.0636 | GACTTGGCTTGGTAGGGCCAGCAGTCT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 52205905 | 52205931 | 6.13e-06 | 0.0656 | TCATTGCCAGGGAGGCCCCAGCTAAGG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 3532566 | 3532592 | 6.35e-06 | 0.0666 | ACGCTGACAGGACAACCACTGCAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr20 | - | 63632979 | 63633005 | 7.13e-06 | 0.0735 | TCTTTTACATGACAGGACCAGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 1563471 | 1563497 | 7.56e-06 | 0.0749 | GCTTGGTCATGGTTGGGTCTTCAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | - | 93999714 | 93999740 | 7.63e-06 | 0.0749 | ATATTGAATTGCTAGCCATGACAGTGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chrX | - | 9540218 | 9540244 | 7.67e-06 | 0.0749 | TCTTTGTCTTGGTAACCCAACTAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr4 | - | 114980987 | 114981013 | 7.95e-06 | 0.076 | GCTTTGACTCTTAAGCTCAAGCAATCC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr9 | + | 132211763 | 132211789 | 8.05e-06 | 0.076 | gccttgccatagctaccatagctatgc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 1362144 | 1362170 | 8.18e-06 | 0.076 | gtttcctcatggaagccatggctgggt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 244006527 | 244006553 | 8.52e-06 | 0.0779 | ACTCTGTTCTGACAGGAATAGCAAAGA |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 1612559 | 1612585 | 9.22e-06 | 0.0829 | GGCTGGTGTTGGTGGGCACAGCAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr9 | - | 132211763 | 132211789 | 1.01e-05 | 0.088 | GCATAGCTATGGTAGCTATGGCAAGGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 733299 | 733325 | 1.03e-05 | 0.088 | GTGCTGTCATGGGAGACTCAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr21 | + | 34933780 | 34933806 | 1.03e-05 | 0.088 | TCTGGGTCTGGGTGGCCTTGGAAATGG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | + | 23035049 | 23035075 | 1.04e-05 | 0.088 | gctttcagttggcaaggccagcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 40789237 | 40789263 | 1.06e-05 | 0.088 | TCTGTGTCTTGGTGTACCCAGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 116541668 | 116541694 | 1.13e-05 | 0.0931 | acattgtggtggtttccatgacaaagc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | + | 4565397 | 4565423 | 1.17e-05 | 0.0944 | GTTTTTACCTGGTAGGGACAGCAGTGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr13 | - | 34431318 | 34431344 | 1.2e-05 | 0.0955 | ACTTTCACCTGAAAGGCATAGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 7616874 | 7616900 | 1.21e-05 | 0.0955 | GCATGGACTTGGGAGGGTGTGCAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | + | 115920975 | 115921001 | 1.27e-05 | 0.0987 | gcttgtttctggcaagcccaacagtat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | + | 133774659 | 133774685 | 1.29e-05 | 0.0987 | gctttcacatggccgggatggcagtat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr21 | + | 42388012 | 42388038 | 1.33e-05 | 0.1 | ACATTGATGTGACCGCCAGGACCAAGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | - | 168445859 | 168445885 | 1.36e-05 | 0.101 | GCATGGTCTTGTTAGGGACTGCAATTG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr18 | - | 64535736 | 64535762 | 1.37e-05 | 0.101 | GCCTTCATCTGGCAAGGCTAGCAATGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | + | 1366939 | 1366965 | 1.39e-05 | 0.101 | GCATTTACATGGCAACCCCTCCAACAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | - | 150331536 | 150331562 | 1.46e-05 | 0.104 | GCTTTCAGCTGGCAAGGCCAGCAATGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | - | 1362063 | 1362089 | 1.47e-05 | 0.104 | ACTTTCACCTGGCAGGGACAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 112686237 | 112686263 | 1.49e-05 | 0.104 | TCTTGATCCTTGCAGCCCTTTCAGACA |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 19107878 | 19107904 | 1.54e-05 | 0.106 | GCTCTGTCCTGGCAGGTACAGCAACAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | + | 1366872 | 1366898 | 1.68e-05 | 0.113 | ACATTTACATGGCAACCCCTCCAACAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | + | 1367006 | 1367032 | 1.68e-05 | 0.113 | ACATTTACATGGCAACCCCTCCAACAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 228128655 | 228128681 | 1.7e-05 | 0.113 | gctttcacttgggaaggccaacagtgt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr22 | - | 23188457 | 23188483 | 1.83e-05 | 0.121 | TCTTTGTCCTGGTGAGGTTAGCAGTCA |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 108065481 | 108065507 | 1.87e-05 | 0.122 | GCTTTTACCTGGCAGGGACAGTAATGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr4 | - | 2753647 | 2753673 | 1.91e-05 | 0.123 | GCAGGGACCTCACAACCAGAGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr3 | + | 133489797 | 133489823 | 1.95e-05 | 0.124 | gccctgttgtggcagggacagcagtat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr15 | + | 68880573 | 68880599 | 2.05e-05 | 0.129 | gctttcacatggcaggggctgcagaat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 70524526 | 70524552 | 2.25e-05 | 0.139 | gctttcacctgacaacaccagtggtcc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 214881131 | 214881157 | 2.26e-05 | 0.139 | ACTTTTACAGGGCAAGGACAGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | - | 440402 | 440428 | 2.37e-05 | 0.143 | TCTGGGATACTGGGGCCCTAGCTGACT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | + | 15011151 | 15011177 | 2.39e-05 | 0.143 | ggtttgctagggctgccacgacaaagc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr10 | + | 62356594 | 62356620 | 2.41e-05 | 0.143 | gctttcatctggcaaggccagcaatac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr10 | - | 67298663 | 67298689 | 2.44e-05 | 0.144 | GCATTTACATGGCAGGGACAACAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr9 | - | 89221061 | 89221087 | 2.49e-05 | 0.146 | CCTTTGCTGGGGCTGCCATGACAAAGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | + | 79136187 | 79136213 | 2.64e-05 | 0.153 | GCTCAGCCCTGACAGCCCCCGCAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | - | 43760405 | 43760431 | 2.69e-05 | 0.154 | GTCTGGTCATGAGAGGGTTAACAGTCC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr22 | + | 22765495 | 22765521 | 2.86e-05 | 0.162 | actgtgcacctgcagccatagcattct |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr2 | - | 85652244 | 85652270 | 2.93e-05 | 0.164 | GCTTTTACCTGGCAGGGCCAACAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | + | 89119555 | 89119581 | 2.95e-05 | 0.164 | agttggctagggctgccatgacaaagc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 90175861 | 90175887 | 3.05e-05 | 0.168 | CTTTTGTCACCTCAGCCCCCTCCATTC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | - | 129631393 | 129631419 | 3.09e-05 | 0.168 | GCTTTCAGTTGGAAGGGTCAGCAGTGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chrX | + | 134095553 | 134095579 | 3.12e-05 | 0.169 | gctttcagctggcaaggctagcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 11168764 | 11168790 | 3.29e-05 | 0.176 | atactgttatgccaaccatgaccatgc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | - | 440011 | 440037 | 3.57e-05 | 0.189 | TCCTTGAGATGGCTGCCCCTGGAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 75579803 | 75579829 | 3.63e-05 | 0.189 | tctttctgttggcagggatagcagtac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 10688223 | 10688249 | 3.64e-05 | 0.189 | GCTTTCACCTGGCAATGCCATTAATGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 69172895 | 69172921 | 3.73e-05 | 0.192 | gcacaggcagggcagggTTAGCAAACC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | - | 1495002 | 1495028 | 3.87e-05 | 0.196 | GCAGTGTCCCGGCAAGGACTGCAGTGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 8040049 | 8040075 | 3.9e-05 | 0.196 | ACTTGGCTTGGCTACCCTGATCAAATC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | - | 30057853 | 30057879 | 3.96e-05 | 0.196 | GCTTTCAGCTGGCAGGGCCAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chrX | + | 16435562 | 16435588 | 3.99e-05 | 0.196 | gcttttacctagcagggatagcagaac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr20 | - | 5490472 | 5490498 | 4e-05 | 0.196 | GCTGTGACCTGGTAGTGCTAACAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 42866739 | 42866765 | 4.02e-05 | 0.196 | gccttcaattggcagggccagcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | - | 1495043 | 1495069 | 4.05e-05 | 0.196 | CTTTGATCACAGCAACCTCTGAAAACC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | - | 29936905 | 29936931 | 4.15e-05 | 0.199 | GGTTTTACTTGGCAGGGCCAACAATAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | - | 130698817 | 130698843 | 4.38e-05 | 0.206 | GTATTGTTGTCCCTGCCAGATGAAAGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chrX | + | 2720095 | 2720121 | 4.39e-05 | 0.206 | acctttttattttggccctagaaattc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 78325872 | 78325898 | 4.39e-05 | 0.206 | aaagtgtattgatagccctgccaactg |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 241453916 | 241453942 | 4.7e-05 | 0.213 | GCTTTTAGTTGGCAAGGCCAGCAACAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr4 | - | 155741854 | 155741880 | 4.73e-05 | 0.213 | GATGTGGTTTGATTGCTTGAGCAAACT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr2 | + | 3267633 | 3267659 | 4.77e-05 | 0.213 | gctgttgcctggcaaggccagcagtgc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | - | 149445754 | 149445780 | 4.79e-05 | 0.213 | TCTCGAACATTGCAACCCCAGCCAACA |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | + | 175905442 | 175905468 | 4.81e-05 | 0.213 | gctctgtcatgaccatccaaaaagatc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | - | 177933741 | 177933767 | 4.81e-05 | 0.213 | GCTCTGTCATGACCATCCAAAAAGATC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | - | 81370049 | 81370075 | 4.82e-05 | 0.213 | AACTGCTTCTGGTGACCCTTGCAAATT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | + | 82062491 | 82062517 | 4.86e-05 | 0.214 | actttgagaggccaaggtgagcagatc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | - | 44571871 | 44571897 | 5.02e-05 | 0.215 | AGATTGTCTTGAGAACCAAATGAGCCT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr18 | + | 11130399 | 11130425 | 5.12e-05 | 0.215 | gctttcagctggcaaggccagcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | + | 36113305 | 36113331 | 5.12e-05 | 0.215 | gctttcaactggcaaggccagcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 64132860 | 64132886 | 5.12e-05 | 0.215 | GCTTTCAGCTGGCAAGGCCAGCAATAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr10 | - | 90701607 | 90701633 | 5.12e-05 | 0.215 | GCTTTTAGCTGGCAAGACCAGCAATAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr2 | - | 213472191 | 213472217 | 5.12e-05 | 0.215 | GCTTTCAACTGGCAAGGCCAGCAATAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 119967191 | 119967217 | 5.2e-05 | 0.216 | ATTTTGATATAACAGGCTTGTTTAATT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr13 | + | 100338387 | 100338413 | 5.38e-05 | 0.218 | ccttggatctgggaacctctgcagtat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | - | 74016147 | 74016173 | 5.39e-05 | 0.218 | GCTTATACTTGGCATGGATAGCAATAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr9 | + | 136513044 | 136513070 | 5.4e-05 | 0.218 | ACTTGTACCCGGCAACGTCGTCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | - | 49828582 | 49828608 | 5.45e-05 | 0.218 | GTTTGGTCTCCCCAAGTCCCTCAAAGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | + | 149445748 | 149445774 | 5.45e-05 | 0.218 | gcatggtgttggctggggttgcaatgt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | + | 72280887 | 72280913 | 5.47e-05 | 0.218 | GGTTTGTGGCTGTAAGCTTAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr3 | + | 73632782 | 73632808 | 5.54e-05 | 0.218 | GATTTGACATGTGAAACCCTGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | + | 106821002 | 106821028 | 5.57e-05 | 0.218 | gctttcatctggcaaggtcagcaatac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr10 | + | 72092340 | 72092366 | 5.59e-05 | 0.218 | CCAttgctggggctgccgtaacaaagt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | - | 30727786 | 30727812 | 5.62e-05 | 0.218 | GCAGGGTTCTGGTAAGGAGAGCAGTGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | + | 92061687 | 92061713 | 5.66e-05 | 0.218 | gccttcagatggcaaggccagcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr21 | + | 46094812 | 46094838 | 5.74e-05 | 0.218 | acgatgatacgtctgacacagcagatg |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | - | 50580224 | 50580250 | 5.74e-05 | 0.218 | ATGGTGTCATGACAACACTCCCTAAGG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr2 | - | 146451348 | 146451374 | 5.82e-05 | 0.22 | GCTTCCTCCTGGTAGAGATAGCAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 71574606 | 71574632 | 5.94e-05 | 0.221 | gcattcacctggcaggagcagcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 225605949 | 225605975 | 5.96e-05 | 0.221 | AGTTTGCTAGGGCTGCCATGACAAAAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | - | 117778997 | 117779023 | 5.97e-05 | 0.221 | ATTATAAAGGGACAGCTTTAGCAAATG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | - | 15498479 | 15498505 | 6.02e-05 | 0.221 | GTTTCCAAATGGGAAACCTTGCAGAGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr21 | - | 33864331 | 33864357 | 6.08e-05 | 0.222 | GCTTATACACGGTAAGGACAGCAAGGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 7171301 | 7171327 | 6.33e-05 | 0.23 | ATATTGTTTAGACCACCTTCTCAAGTC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 38328600 | 38328626 | 6.55e-05 | 0.232 | GCATGGTGTTGGCAGTACCTCCAATAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr18 | + | 10095547 | 10095573 | 6.58e-05 | 0.232 | gtcttcagttggcagggctagcaatac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | - | 34851546 | 34851572 | 6.58e-05 | 0.232 | ACTTTCTCACAAAAAGCCTGTCAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 48378000 | 48378026 | 6.58e-05 | 0.232 | TTATTGAGATGGAAGGCATATGAAATT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chrX | + | 2720013 | 2720039 | 6.59e-05 | 0.232 | ggtttggcatgggaaccatactggttt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | + | 50580233 | 50580259 | 6.7e-05 | 0.234 | GTGTTGTCATGACACCATGATGGATCC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr18 | + | 47434490 | 47434516 | 6.76e-05 | 0.235 | gctttcacctggcaaggattgcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr21 | - | 35963110 | 35963136 | 6.86e-05 | 0.235 | GCCTTTCCGTGGCAAGGATAGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr4 | + | 7751180 | 7751206 | 6.87e-05 | 0.235 | acttgcttatggtgtccttactaatag |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr2 | + | 133964015 | 133964041 | 6.89e-05 | 0.235 | tctttcagttggcaatgccagcaatat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 25727906 | 25727932 | 6.93e-05 | 0.235 | ACTGTGTTATCAAAGCCTTGTCATGTG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 44705626 | 44705652 | 7.23e-05 | 0.242 | ACTTTGATGGTGCAGCCTGTGCGGGTG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | - | 39060839 | 39060865 | 7.32e-05 | 0.242 | GCTTTCAGCTGGCAAGGCCAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | + | 53643420 | 53643446 | 7.32e-05 | 0.242 | gcttttagctggcaaggccagcaatac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | - | 122974449 | 122974475 | 7.32e-05 | 0.242 | GCTTTCAGCTGGCAAGGCCAGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | + | 85419194 | 85419220 | 7.38e-05 | 0.243 | CCTTAGTCTCTGCAGGGACAGCAGTGA |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 78325877 | 78325903 | 7.63e-05 | 0.248 | TCTTTCAGTTGGCAGGGCTATCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr8 | + | 142900159 | 142900185 | 7.63e-05 | 0.248 | gcttttagctggcaaggttagcagtat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 8117051 | 8117077 | 7.65e-05 | 0.248 | GCATAGTGAAGCCAGCCAGACCCGAGG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | + | 62722127 | 62722153 | 7.74e-05 | 0.248 | CTATGGTCTTGGGAGGGACTGCAGTGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | + | 124625014 | 124625040 | 7.74e-05 | 0.248 | GCACtgccagggccaccgtgacaaagc |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | - | 122974566 | 122974592 | 7.81e-05 | 0.248 | GATGTGGTTTCATTGCCTGAGCAAATT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr7 | - | 138781189 | 138781215 | 7.83e-05 | 0.248 | GCTTTTAGCTGGCAAGGCCAGCAGTAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | + | 36132092 | 36132118 | 7.97e-05 | 0.251 | gttttcaccttgcagggctatcagtat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | + | 91042926 | 91042952 | 8.24e-05 | 0.257 | gatttggtttgattgcttgaggaaatt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | - | 154815474 | 154815500 | 8.24e-05 | 0.257 | GATTTTTCAGGGCAACACAAGAAACGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | - | 44705805 | 44705831 | 8.42e-05 | 0.259 | GCAGGGTCTTGGTGTTCTTCGCAATAC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 79493375 | 79493401 | 8.42e-05 | 0.259 | GATGTGTTTTTATTGCTTGAGCAAATT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 24893140 | 24893166 | 8.57e-05 | 0.262 | AGATGGTCAGGGAAGGTCTCTCAGAGG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | - | 48377789 | 48377815 | 8.61e-05 | 0.262 | ACTCTGTTAATGCTTCCAGGTCAAAGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr1 | - | 24892943 | 24892969 | 8.72e-05 | 0.263 | CAGTTTACATGGCAGGGACAGCAGAGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr20 | - | 61916497 | 61916523 | 8.73e-05 | 0.263 | GAATGGTTATGATGACGACAGCAGCTA |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 7383470 | 7383496 | 8.81e-05 | 0.264 | agtttgctagggctgtcatgacaaagt |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr5 | - | 61911599 | 61911625 | 8.88e-05 | 0.264 | GTCTTCACCTGGCAAGGCCAGCAATAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 36670714 | 36670740 | 8.99e-05 | 0.264 | gctttcactgtgctgcctcaggagtat |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr12 | + | 110835776 | 110835802 | 9.03e-05 | 0.264 | GCAGGGTCACAGCATGGCCTGCAATCT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr17 | - | 41146038 | 41146064 | 9.07e-05 | 0.264 | ACATTTTCATGGCAAGGAACGCAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr2 | + | 239014607 | 239014633 | 9.07e-05 | 0.264 | GCAGGGACCTGGGAGGGGTAGCAATGG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr10 | - | 90701717 | 90701743 | 9.1e-05 | 0.264 | GTTGGCATTTCATTGCCTGAGCAAATG |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr3 | + | 184574638 | 184574664 | 9.16e-05 | 0.265 | ATGTTGTCATGAGAAGGTGAACAGTGC |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr16 | + | 50615562 | 50615588 | 9.21e-05 | 0.265 | gtgagagcatggcaggctcagaaaagg |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr2 | - | 121223641 | 121223667 | 9.29e-05 | 0.266 | GCATTGGCATGGTAGATGCCACAATGT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr6 | + | 142193790 | 142193816 | 9.54e-05 | 0.271 | gctttcatctggcatggccagcagtac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr13 | + | 41008440 | 41008466 | 9.56e-05 | 0.271 | gctttgactctgttggcttctcaatac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 8116180 | 8116206 | 9.62e-05 | 0.271 | gctttgtcctgatagggtatgcagtac |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr11 | - | 43875824 | 43875850 | 9.68e-05 | 0.271 | GCATTTACTTGGCATGGCCAACAGTAT |
RCTTTGTCATGGCAGCCCTAGCARACK | MEME-8 | chr19 | + | 2483671 | 2483697 | 9.94e-05 | 0.277 | ACATGTGCCTGGGAATCCCAGCAGTAT |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_9 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif RCTTTGTCATGGCAGCCCTAGCARACK /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_9 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF157.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.