Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 599 sequences, 299500 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
TGTGTGTGTGTGTGTGTGTGTGTG 24 TGTGTGTGTGTGTGTGTGTGTGTG
GTGTGTGTGTGTGTGT 16 GTGTGTGTGTGTGTGT
CHTCHYYMTCWCYMTC 16 CATCACTCTCTCCCTC
YCAYCAYCAYCAYCATCAYCAYCAYCAY 28 TCATCATCATCATCATCACCATCATCAC
TCAYCATCAYCA 12 TCACCATCATCA
ACACACA 7 ACACACA
YYTCYYYCTYYYYBBCTBYCBY 22 TCTCTTCCTCCCTTTCTCCCTC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC 36 TGCTCCACCCTGACTCATTCCAATTACCTGCTCCAC
TCATCACCA 9 TCATCACCA
CACAMAMAVMMACACAVACA 20 CACACACAAACACACACACA

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.234 C 0.266 G 0.266 T 0.234


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115928866 115928901 4.78e-22 8.62e-17 TGCTCCACCCTGACTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115929034 115929069 4.78e-22 8.62e-17 TGCTCCACCCTGACTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115929062 115929097 4.78e-22 8.62e-17 TGCTCCACCCTGACTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240090 50240125 4.48e-21 6.06e-16 tgctccaccctgactcattcaaattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240062 50240097 8.52e-21 7.06e-16 tgctccaccctgactcattcagattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 29845516 29845551 9.91e-21 7.06e-16 tgctccaccctgactcattccagtcacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115928838 115928873 1.17e-20 7.06e-16 TGCTCCACCCTGACTCATTCCGATTACCTGATGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115928950 115928985 1.17e-20 7.06e-16 TGCTCCACCCTGACTCATTCCGATTACCTGATGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115929006 115929041 1.17e-20 7.06e-16 TGCTCCACCCTGACTCATTCCGATTACCTGATGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183432 73183467 2.42e-20 1.01e-15 tgctccaccctgactcatttcaatcacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183460 73183495 2.42e-20 1.01e-15 tgctccaccctgactcatttcaatcacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183488 73183523 2.42e-20 1.01e-15 tgctccaccctgactcatttcaatcacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183656 73183691 2.42e-20 1.01e-15 tgctccaccctgactcatttcaatcacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 110965480 110965515 2.9e-20 1.12e-15 ttttccaccctgactcattccgattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240314 50240349 5.44e-20 1.84e-15 tgctccaccctgactcattccaattacctgctctgc
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chrX - 65932849 65932884 5.44e-20 1.84e-15 TGCTCCACCCTGACTCATTCCAATTACCTGCTCTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240174 50240209 1.03e-19 3.29e-15 tgccccaccctgactcattcagattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183516 73183551 2.31e-19 5.69e-15 tgctccaccctgactcattcccattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183572 73183607 2.31e-19 5.69e-15 tgctccaccctgactcattcccattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183600 73183635 2.31e-19 5.69e-15 tgctccaccctgactcattcccattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183684 73183719 2.31e-19 5.69e-15 tgctccaccctgactcattcccattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183740 73183775 2.31e-19 5.69e-15 tgctccaccctgactcattcccattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chrX - 65932793 65932828 4.12e-19 9.69e-15 TGCTCCACCCGGACTCATTCCAATTACCTGCTCTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 29845544 29845579 4.95e-19 1.12e-14 tgctccaccctgactcattctgattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82976133 82976168 5.64e-19 1.17e-14 TGCTCCACTCTGACTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115929090 115929125 5.64e-19 1.17e-14 TGCTCCACCCTGATTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643175 62643210 6.26e-19 1.25e-14 ttcttcaccctgactcattccaattacctactcaac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930408 115930443 8.91e-19 1.72e-14 GGCTCCACCCTGACTCATTCCTGTTACCTGATGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82976077 82976112 2.26e-18 4.22e-14 TGCCCCACCATGACTCATTCCAATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183628 73183663 5.04e-18 9.1e-14 tgctccactctgactcatttcaatcacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240146 50240181 1.12e-17 1.96e-13 tgccccaccctgactcattcaaattacctgccccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183544 73183579 2.43e-17 3.89e-13 tgctccaccctgactcattccctttacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183712 73183747 2.43e-17 3.89e-13 tgctccaccctgactcattccctttacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183852 73183887 2.44e-17 3.89e-13 tgctccaccctgactcattctcattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183768 73183803 2.73e-17 4.1e-13 tgctccaccctgacttattcccattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183796 73183831 2.73e-17 4.1e-13 tgctccaccatgactcattcccattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115928894 115928929 4.62e-17 6.58e-13 TGATGCACCCTGACTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115928978 115929013 4.62e-17 6.58e-13 TGATGCACCCTGACTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240286 50240321 5.11e-17 7.09e-13 tgctccaccctaactcattctgattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930436 115930471 6.25e-17 8.45e-13 TGCTCCACCCTGATTCATTCCGATTACCGGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 29845488 29845523 1.23e-16 1.62e-12 tgctccagcctgactcattctggttacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240202 50240237 1.35e-16 1.7e-12 tgctccaccctgactcattctgatcacctgccccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82976105 82976140 1.35e-16 1.7e-12 TGCTCCACCCTGACTCATTCTGATCACCTGCCCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82975938 82975973 1.97e-16 2.23e-12 TGCCCCATCCTGACTCACTCCAATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930296 115930331 1.97e-16 2.23e-12 TGCTCCACCCTGATTCATTCCAATTACCGGCTCCGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115928922 115928957 1.98e-16 2.23e-12 TGATGCACCCTGACTCATTCCGATTACCTGATGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930324 115930359 1.98e-16 2.23e-12 TGACGCACCCTGACTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930464 115930499 1.98e-16 2.23e-12 TGACGCACCCTGACTCATTCCGATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930352 115930387 2.14e-16 2.31e-12 TACTCCACCCTGACTCATTCCGATTACCTGACGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930492 115930527 2.14e-16 2.31e-12 TACTCCACCCTGACTCATTCCGATTACCTGACGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643040 62643075 3.54e-16 3.68e-12 ttcttcaccttgactcattctgattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 110965435 110965470 3.54e-16 3.68e-12 ttctccaccctgactcattctgattacttactccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 29845600 29845635 4.56e-16 4.66e-12 tgccccagcctgactcattccagttacctgcaccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240258 50240293 6.67e-16 6.69e-12 TACCCCACCCTGATTCAttcagattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930520 115930555 8.19e-16 8.06e-12 TGCCCCATCCTGACTAATTCCGATTACCTACTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chrX - 65932905 65932940 1.32e-15 1.27e-11 TGCTCCATCCTGACTCATTCCCATTACCTTCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240230 50240265 1.83e-15 1.73e-11 tgccccaccctgactcattcTGATCACCTACCCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183824 73183859 2.49e-15 2.32e-11 tgctccaccctgactaattctgattagctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chrX - 65932748 65932783 2.59e-15 2.37e-11 TTCTCCACCCTGACTCATTCTGATTTCCTGATCTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930380 115930415 5.51e-15 4.97e-11 TGATGCACCCTGACTAATTCCAATTACCTACTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643130 62643165 7.53e-15 6.68e-11 ttctccactctgactcattgttattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 110965390 110965425 1.36e-14 1.19e-10 ttctccaccttgactcattctgattacctactccat
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115929147 115929182 2.2e-14 1.89e-10 TTTGCAACCCAGACTCATTCCAATTACCTGCTGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82976049 82976084 5.02e-14 4.25e-10 TGCTCCACCCTGACTCATTCCAATTACCTGCCTGCC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chrX - 65932877 65932912 8.1e-14 6.74e-10 TTCTCCACTCTGACTCATACTCATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 29845628 29845663 1.1e-13 9.02e-10 tgcaccaccctgactcattctgatcacctgtttcac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643085 62643120 1.4e-13 1.13e-09 ttctctgccttgactcattgcgattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240118 50240153 1.63e-13 1.29e-09 tgctccactctgactcattctgatcatctgccccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82975910 82975945 1.87e-13 1.47e-09 TGCTCCACCCTGACACGTTCCGGTTACCTGCTCCTG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 29845460 29845495 2.22e-13 1.72e-09 tgttccaccctgactcatcctgattacttgctccag
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930240 115930275 4.33e-13 3.3e-09 TGATGCACCCTGACTCATTCCAATTACTTGCTCTGT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115930268 115930303 8.25e-13 6.2e-09 GGCTCCGCCGTAAGTCATTCCGATTACCTGATGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82975994 82976029 7.9e-12 5.86e-08 TGCCCCACCCTGACTCATTATGATCACCTTCCCCAA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82975966 82976001 1.43e-11 1.05e-07 TTCCCCAACCTGACTCATTCTGATCACTTGCCCCAT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 29845572 29845607 3.05e-11 2.17e-07 tgctccaccctgattcatcctgattacttgccccag
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chrX - 65932821 65932856 3.05e-11 2.17e-07 TGCTCTGCCCTGACTCATTCTGATTGTTTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82976022 82976057 2.1e-08 0.000148 CTGCCTGCCTTGGCTCATTCTGATCACCTGCCCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643158 62643193 3.47e-08 0.000241 tgctccaccctgactcattcttcaccctgactcatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643203 62643238 5.36e-08 0.000367 tactcaaccctgactcattccgattcattctccacc
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643113 62643148 1.33e-07 0.000903 tgctccaccctgactcattctccactctgactcatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr22 - 49505379 49505414 3.84e-07 0.00256 ACCACCACCCTAAATCATTACCGTCACCATCACCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 110965525 110965560 4.41e-07 0.00291 ttctccaccttgactcatttcataaccgtttttccc
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr8 + 142448825 142448860 5.84e-07 0.00381 GCCTCCACTCTCTCTCCTGCCCATCCCCCACTCAGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 32817429 32817464 8.18e-07 0.00527 GGCTCCACCTTTTCCCGTCTCATCGACCTGCTCGAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643068 62643103 8.99e-07 0.00566 tgctccaccctgactcattctctgccttgactcatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 110965508 110965543 8.99e-07 0.00566 tgctccaccctgactcattctccaccttgactcatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 110965463 110965498 1.45e-06 0.00904 tactccaccctgactcattttccaccctgactcatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240355 50240390 1.55e-06 0.00951 ttctctaccctgactcattccataaccatttttcct
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643230 62643265 2.81e-06 0.0171 ttctccaccctgactcaattcataaccatttttcct
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr14 - 23057047 23057082 2.9e-06 0.0174 CTTTCCTGCCTTTCTCTTTTCTCTTTCTTGCTCTCC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643006 62643041 3.06e-06 0.0182 tactccaccctgactcattctccatcctgacttatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr17 + 3890443 3890478 3.76e-06 0.0221 gcctccagccccactctttccagctagctgccacct
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 110965373 110965408 4.8e-06 0.0277 tactccaccctgactcattctccaccttgactcatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 110965418 110965453 4.8e-06 0.0277 tactccatcctgactcattctccaccctgactcatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr22 - 29979390 29979425 5.14e-06 0.0293 TCCACCTCCCGGGTTCATGCCATTCTCCTGACTCAG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chrX - 65932765 65932800 5.42e-06 0.0306 TGCTCTGCCCTGACTCATTCTCCACCCTGACTCATT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82975865 82975900 5.97e-06 0.0333 TCCTCCACTCTGACTTATTCCATAACCATTTTTCCC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr8 - 25459187 25459222 6.05e-06 0.0334 CTCCGCCCGCCGACCGATTCAAATCCCCGACCCCGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115929119 115929154 6.28e-06 0.0342 TGCTGCACCCTGACTCATTCCCAATTACCTGCTCCA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr16 - 30066099 30066134 6.32e-06 0.0342 TCCCCCGCCATGACTCAGCGCGCGCAGCCGCTGCAT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr9 - 95508092 95508127 6.43e-06 0.0345 TTCCCTCCTCTAACTCTTTGGGATCGCCCCCGCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr2 + 38751201 38751236 6.5e-06 0.0345 GTCCCTCACCGGACTCCAGCTTCTTACCTCCTCCGT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62642978 62643013 7.33e-06 0.0385 ttctcgtaaggcaacatttccaattgcctactccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr3 - 53347550 53347585 7.63e-06 0.0397 TTTGCCTCGATGGCACTTTCCTGTCCGCGACTCCGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 125550614 125550649 8.91e-06 0.0459 AGCTTCACATTGCTAATTTACAATCACATGCTGTAT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 28885183 28885218 9.26e-06 0.0473 GGGCCCACAGCAGCTCTTTAGAATCACCCCATCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr12 - 106075487 106075522 9.63e-06 0.0487 ATCTCCACCATGACACAGTAGGGATAGACACTCTTC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr17 + 3890327 3890362 1.11e-05 0.0557 GGCTGTTGCCTGACTCAGCACAGCTACCCCCAGCGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 + 62643023 62643058 1.21e-05 0.0602 ttctccatcctgacttattcttcaccttgactcatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 244275450 244275485 1.33e-05 0.0655 TATCTCTCCCTGACTGCTATCTCTCCCCGACTGCTA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 1375123 1375158 1.4e-05 0.0683 GGCCTCCCGCTGACCCTTCCCAAGCCCGACCTCGAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr12 - 56636849 56636884 1.48e-05 0.0713 AGCCTCTCCCGCAGTCTCTCCTGTGTCATGATCTGG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 244275243 244275278 1.49e-05 0.0713 TCTCTCTCCCTGACTGCTATCTCTCTCCCTGTCTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 + 39410318 39410353 1.53e-05 0.0724 ACCCTCACCCTTCCTCCTCTTTTTCACTTCCTCCTC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr22 + 20496376 20496411 1.61e-05 0.0755 atcccctccctctctcattccctttccctccctcct
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 244275613 244275648 1.67e-05 0.0779 TATCTCTCCCTGACTGCTATCTCTCTCCCTCACTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 - 35557422 35557457 1.87e-05 0.0865 GTCCTCACCTGGACTTTTATCCGTATCCTGACCTCT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 - 1383588 1383623 1.99e-05 0.0911 GGCTCGAACCACCAACCTTTCGGTTAACAGCCGAAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 167984984 167985019 2.08e-05 0.0945 TTTTCCACACAAGCTCTCTTCTCTTGTCTGCTGTCA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr11 - 125626111 125626146 2.13e-05 0.0962 CCCCTCCGCAGGAGTCTCTCCAATCCCCTGCGCTAG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr9 - 129607333 129607368 2.19e-05 0.0978 CTGCCCACCCTCACCCTTTCCCATCATTTCTGCCTC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr10 - 119313349 119313384 2.2e-05 0.0978 ATTGCCACCACCACTCATTACCACCATCATCACCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr2 + 47176496 47176531 2.35e-05 0.103 CTCTCCACTCGGACTAATTCGCCTCCTCCGCCCCCA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 - 35248259 35248294 2.68e-05 0.117 GCCTCCTGTGTCTCCCAGTTAGATGACCTGAGGAAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 + 125659370 125659405 2.84e-05 0.123 AGCTCATTCCTTTATCAGTCAGGTAAACTGAAACAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr17 - 9327258 9327293 2.85e-05 0.123 TTCTTCTTTCTTCCTTCTTCCTCCTTCCTCCTCCTC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 36680522 36680557 2.97e-05 0.127 TGCAGGAAACTGACTCATCACTACTCCCTCCAGCGG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 236098247 236098282 3.06e-05 0.129 GGCACAATCTTGACTCACTGCAGCCTCCGCCTCCCA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 + 82975802 82975837 3.11e-05 0.13 tgcacaggctaaactaattccgattggctaatttaa
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr2 + 219572089 219572124 3.19e-05 0.133 CGCTTGAGGCGAAATCCTTCCCAGCCCCTCCCCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 143450524 143450559 3.22e-05 0.133 GGTCCCACCCCGCAGCATCTACCTCCCGGGCTCCTC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr7 + 566131 566166 3.26e-05 0.134 CGCTGCcacctttatcattaccattaccatcatcac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 + 133700019 133700054 3.35e-05 0.136 ATTTGCCCGCGGTCTTCATTCAGGCCCCTGCTGCAG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr4 - 110905033 110905068 3.51e-05 0.142 TGTTTTATGGTGAATCATTGATGAGGCCAGCAGAAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 236623934 236623969 3.58e-05 0.144 TTCTCTATCAGTACTGCTTAGGGTTATCTTGAGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 146377031 146377066 3.63e-05 0.144 TGCTTTACTCTTAATCGTTTCTCTCACAGTCGGAGG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr17 - 45148539 45148574 3.66e-05 0.145 TTTTCCTCCCTCCCTCCTCCCCCTTCCCACAGCTCC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 113308700 113308735 3.78e-05 0.148 TTTCCTACCCTGCATGAAACACATTTCTTTAACAGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 - 42283445 42283480 3.81e-05 0.148 ACACCCACGCTGTCACACCTCACATACCTGCTCACA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr21 + 40433839 40433874 3.82e-05 0.148 GATATCACCTGAGCTGGTTAATGTCACCTGAGGTAG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 + 43799050 43799085 3.96e-05 0.152 TTCTTCCTCCTCCCTCTATCCTTTCACTTTCACCTA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 - 41884312 41884347 4.05e-05 0.154 CGCTCTAGCCCGGCTCCTGCCGGGCTCCGGCCCCGA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chrUn_GL000224v1 - 3730 3765 4.08e-05 0.154 CTCCTCATTCTGTCTCAAACCCTCTCCCTGACCCTC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 - 3627036 3627071 4.15e-05 0.156 TGCCCCGCCCACAGTTTCTCAGGCCCCCTGAGGCGT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 73183404 73183439 4.18e-05 0.156 cctcataaagcaacctttttcgattacctgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 + 47244011 47244046 4.32e-05 0.16 TGTCTCTCCCGCCCCCCTCTCCCTTCCCCGATGCCC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 115929118 115929153 4.61e-05 0.17 GCTGCACCCTGACTCATTCCCAATTACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 - 46734356 46734391 4.83e-05 0.177 CCTCTCACTCTGCCTCCTCTCTCTCTCTCCCTCCGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 40692013 40692048 5.04e-05 0.183 TGCTCTTGCCTGGCCCGCTGCTGTCGCCGCCGCCGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 82976161 82976196 5.19e-05 0.186 CCTCATAAAGCAACCTTTTTCAATCACCTGCTCCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr15 + 71240712 71240747 5.2e-05 0.186 GCCTTTGCATGATGTCATTCATTTTACCTGGCCTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 - 16129074 16129109 5.25e-05 0.187 GGCGCCGCACTCCAGCAGCCCAACTGCCTGCGCTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr2 + 10311921 10311956 5.33e-05 0.189 ttcatcaccattcatcatcactgtcatcatcaccat
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr16 - 323679 323714 5.43e-05 0.19 TCCGCCTCCCGGGTTCACATAATTCTCCTGCCTCAG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr15 + 78536266 78536301 5.47e-05 0.19 TctctccctctccctcctctcctgtccCTGCTacac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr22 + 27008834 27008869 5.48e-05 0.19 tcTTACACAGGGACTCTAGGCAGCAtcccactccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr12 - 130764229 130764264 5.53e-05 0.19 TCATCAACACTGCATCATTAACACCATGAGATCAGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr18 + 50240034 50240069 5.58e-05 0.19 cctcataaagtgaccttttttgatcaactgctccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 7568303 7568338 5.59e-05 0.19 accaccaccatccctcatcaggatcaccagcatcat
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr17 + 63842863 63842898 5.65e-05 0.191 CGCTCCTGCCCGGGAGATTCCGGATCCAGGATCTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr17 + 18087795 18087830 5.8e-05 0.195 GGCCCCGCCCCGGCTCTTTCCAGAGGTCCGCAGCCT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 244275380 244275415 6.01e-05 0.199 TCTCTCTCCCTGACTGCTATGTCTCCCCGACTGCTA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr8 - 6648994 6649029 6.03e-05 0.199 TTAGTCACCTGTTCTGTCCTTAGTCACCTGCTCTGT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr8 - 6649196 6649231 6.03e-05 0.199 TTAGTCACCTGTTCTGTACTTAGTCACCTGCTCTGT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 236686017 236686052 6.08e-05 0.199 CTCTTCTCTCTCTCTCATCTCTCTCTCGTGCCTCTC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr20 + 61045397 61045432 6.13e-05 0.2 ccattcaccatgcttctatccattcacctaaccatt
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr5 - 176591995 176592030 6.22e-05 0.2 GCCACCACCATCACCCACCACCACTACCATCACCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 244275188 244275223 6.22e-05 0.2 TCTCTCTCCCTGACTGCTATCTCTCCCTGACTGCTA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr8 - 6649148 6649183 6.23e-05 0.2 TTAGTCACCTGGTCTGTACTTAGTCACCCGCTCTGT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr22 + 32464439 32464474 6.47e-05 0.206 GTTCTCCACCTTGCGCCTTAAACTCAGCTGCTAAAA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr11 + 73142615 73142650 6.52e-05 0.206 TCTCCGAGAGTGGCACGTTCCAGACGCCTCCTGCCC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 206612536 206612571 6.74e-05 0.212 TGCCCCTCCCTGCCCTGCTTTAGTTCCAGGTACCGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 244275207 244275242 7.13e-05 0.223 TCTCTCTCCCTGACTGCTATCTCTCTCCCTGACTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 34072932 34072967 7.37e-05 0.229 atcaccacacagatacacaccacacacatgcatcac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 - 55216463 55216498 7.43e-05 0.23 TGGTTCACCTGCAATGAGATCAATGATCTAATCGCG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 244275539 244275574 7.67e-05 0.234 TATCTCTCCCTCACTGCTATCTCTCTCCCTCACTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 244275594 244275629 7.67e-05 0.234 TCTCTCTCCCTCACTGCTATCTCTCTCCCTCACTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr13 - 113208735 113208770 7.99e-05 0.243 TTCTCCCTCCGGAACCAACCTGCGCACCCGCGGCGG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 201436114 201436149 8.11e-05 0.245 TTCCAGTCCCAGCCTCTTATTCATCACTCCCTGAAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr22 + 29979596 29979631 8.35e-05 0.251 AGTTTAACAGTGAATGATTTGCATTAGGTAATGCTG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 + 232635240 232635275 8.51e-05 0.254 TTTTATACCCCTTGTTATCTCTTTCACTTTCTCTAG
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr3 - 194352674 194352709 8.73e-05 0.26 TTTCTCACACACTCTCATTCTACACACACGAGACAT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr12 - 107463165 107463200 8.92e-05 0.263 TACATCATCATCACCCATCATTACTACCACCACCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr8 - 36574253 36574288 8.96e-05 0.263 TGTTTCCCCCTGTGTTACTGCTGTGGCCTCTGGATC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr20 + 2450159 2450194 9.05e-05 0.264 tttgttaagccaacatatttataatagctgctgtga
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr1 - 1001011 1001046 9.09e-05 0.264 TTACGCAACCTGCCCCTTTGCAGTTATATTAACAGT
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr15 - 59587372 59587407 9.35e-05 0.271 TGATGCAATCTGAACCCATCATCTTCCCTCAAGTGC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr9 - 97511265 97511300 9.42e-05 0.271 TTATTTTCACTGGCTGATTTCATTCTCTTAGTCATA
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 + 55283866 55283901 9.46e-05 0.271 ccctccatcctctctcctgcatcctcccacctcctc
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr6 + 158853021 158853056 9.61e-05 0.274 acacacacccatacaccttcatgtcacacataccac
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 + 43799096 43799131 9.86e-05 0.279 CCTCCCTCCTTCCCTCCTTCCTCTCACCCCCAGACC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr14 - 23057243 23057278 9.97e-05 0.28 TCCCGCGCTCTGCCTCTTTCCCTTCTCCCCTCGCAC
TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC MEME-8 chr19 - 48539772 48539807 9.97e-05 0.28 ATCTGCACAGCTACGCGTTTCAGCCTCATGATGATC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_4 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif TGCTCCACCCTGACTCATTCCRATTACCTGCTCCAC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_4 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF148.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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