# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 TTATTTATTTATTTAT MEME-1 TTATTTATTTATTTAT 7.4e-272 1.0e-274 -630.91 0.0 41 485 282 299 0.08454 4.1e-277 242 1 TTATTTATTTATTTATT MEME-2 TTATTTATTTATTTATT 4.7e-267 6.3e-270 -619.86 0.0 42 484 283 301 0.08678 2.6e-272 241 1 AGCAAKWCYSCKYCTM MEME-3 AGCAAKWCYSCKYCTM 3.0e-166 4.0e-169 -387.75 0.0 89 485 400 547 0.18351 1.7e-171 242 2 GAATTGY DREME-1 GAATTGC 1.8e-103 2.4e-106 -243.18 0.0 66 494 211 309 0.13360 9.9e-109 246 2 RCTCY DREME-2 RCTCY 1.5e-013 2.0e-016 -36.14 0.0 140 496 268 592 0.28226 8.1e-019 247 2 TAAATAAA DREME-3 TAAATAAA 1.7e-228 2.2e-231 -531.10 0.0 43 493 274 324 0.08722 9.0e-234 246 2 RTCTCAA DREME-4 GTCTCAA 1.6e-031 2.1e-034 -77.55 0.0 76 494 130 269 0.15385 8.5e-037 246 2 GAAAACAB DREME-5 GAAAACAK 2.7e-007 3.6e-010 -21.74 0.0 175 493 85 129 0.35497 1.5e-012 246 2 CCCAARAG DREME-6 CCCAARAG 2.2e-028 2.9e-031 -70.31 0.0 63 493 65 99 0.12779 1.2e-033 246 2 TGACYCA DREME-7 TGACCCA 3.0e-017 4.0e-020 -44.68 0.0 106 494 73 114 0.21457 1.6e-022 246 2 GGYGAC DREME-8 GGTGAC 2.3e-017 3.1e-020 -44.91 0.0 115 495 118 219 0.23232 1.3e-022 247 2 GTGBACA DREME-9 GTGBACA 4.4e-001 5.8e-004 -7.45 0.0 132 494 54 116 0.26721 2.4e-006 246 2 ATGTTYA DREME-10 ATGTTYA 1.3e-006 1.8e-009 -20.14 0.0 164 494 87 142 0.33198 7.3e-012 246 2 GGTATAYA DREME-11 GGTATATA 1.8e-015 2.4e-018 -40.58 0.0 51 493 63 166 0.10345 9.7e-021 246 3 M0104_1.02 (ARID3B)_(Mus_musculus)_(DBD_0.99) AWATTAATWAN 2.3e-014 3.1e-017 -38.01 0.0 54 490 133 532 0.11020 1.3e-019 244 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 1.3e0000 1.7e-003 -6.37 0.0 56 492 95 532 0.11382 7.0e-006 245 3 M0398_1.02 (ZSCAN10)_(Mus_musculus)_(DBD_0.82) NGKRAGTGCNN 5.2e-016 7.0e-019 -41.81 0.0 146 490 280 576 0.29796 2.9e-021 244 3 M0413_1.02 (ZBTB1)_(Mus_musculus)_(DBD_0.99) NDTGCGKGDN 2.6e-001 3.5e-004 -7.96 0.0 347 491 424 532 0.70672 1.4e-006 245 3 M0424_1.02 (SNAI3)_(Mus_musculus)_(DBD_0.75) NNTGACAKNN 7.6e-001 1.0e-003 -6.89 0.0 121 491 194 590 0.24644 4.1e-006 245 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 2.8e-040 3.7e-043 -97.70 0.0 61 491 206 584 0.12424 1.5e-045 245 3 M0437_1.02 (ZNF32)_(Mus_musculus)_(DBD_0.99) TATRTATRT 9.0e-001 1.2e-003 -6.73 0.0 66 492 71 311 0.13415 4.9e-006 245 3 M0442_1.02 (ZBTB3)_(Mus_musculus)_(DBD_1.00) NNTGCAGYG 9.6e-019 1.3e-021 -48.10 0.0 194 492 358 597 0.39431 5.3e-024 245 3 M0603_1.02 CGBP NNNBCGK 3.1e-004 4.2e-007 -14.69 0.0 46 494 82 439 0.09312 1.7e-009 246 3 M0608_1.02 MLL NNNRSCGNDN 4.8e-004 6.4e-007 -14.25 0.0 49 491 91 482 0.09980 2.6e-009 245 3 M0609_1.02 DNMT1 NNCCGMNNNN 2.2e-002 3.0e-005 -10.42 0.0 329 491 369 473 0.67006 1.2e-007 245 3 M0633_1.02 DMRT2 KAATKTATWN 1.2e-062 1.5e-065 -149.23 0.0 47 491 206 558 0.09572 6.3e-068 245 3 M0718_1.02 FOXK1 DNRTMAACAH 8.2e-003 1.1e-005 -11.42 0.0 241 491 354 588 0.49084 4.5e-008 245 3 M0719_1.02 FOXG1 RTAAACAW 1.3e-011 1.8e-014 -31.67 0.0 39 493 106 558 0.07911 7.2e-017 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 9.2e-038 1.2e-040 -91.90 0.0 45 489 171 583 0.09202 5.0e-043 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 2.1e-002 2.8e-005 -10.47 0.0 45 493 93 580 0.09128 1.2e-007 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 7.3e-124 9.8e-127 -290.15 0.0 47 491 284 583 0.09572 4.0e-129 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 7.2e-078 9.7e-081 -184.24 0.0 63 491 266 585 0.12831 4.0e-083 245 3 M0896_1.02 VENTX TTAATTAG 9.1e-015 1.2e-017 -38.94 0.0 51 493 128 528 0.10345 5.0e-020 246 3 M0906_1.02 (VTN)_(Mus_musculus)_(DBD_0.79) NMTTAATTAR 1.2e0000 1.7e-003 -6.40 0.0 49 491 75 448 0.09980 6.8e-006 245 3 M1528_1.02 (RFX6)_(Mus_musculus)_(DBD_0.66) NCNTRGYWAC 7.9e-002 1.1e-004 -9.16 0.0 123 491 203 594 0.25051 4.3e-007 245 3 M1529_1.02 (RFX7)_(Mus_musculus)_(DBD_1.00) VCNTRGYAAC 5.2e-001 7.0e-004 -7.26 0.0 305 491 420 590 0.62118 2.9e-006 245 3 M1582_1.02 (HMG20B)_(Mus_musculus)_(DBD_0.94) NWAWATAATWN 8.2e-027 1.1e-029 -66.69 0.0 42 490 138 533 0.08571 4.5e-032 244 3 M1605_1.02 (SOX1)_(Mus_musculus)_(DBD_1.00) ATTSWHNNNN 9.8e0000 1.3e-002 -4.33 0.0 405 491 511 578 0.82485 5.4e-005 245 3 M1668_1.02 PRKRIR NYCVNVSKRNNN 1.5e-010 2.0e-013 -29.23 0.0 169 489 298 587 0.34560 8.3e-016 244 3 M1884_1.02 MEF2A DKCTAAAAATAGMHH 1.9e-004 2.5e-007 -15.21 0.0 70 486 133 551 0.14403 1.0e-009 242 3 M1968_1.02 EBF1 TCCCWGGGGRV 2.9e-001 3.9e-004 -7.84 0.0 288 490 378 552 0.58776 1.6e-006 244 3 M2273_1.02 E2F6 RGGCGGGARRV 4.1e-001 5.5e-004 -7.50 0.0 278 490 368 554 0.56735 2.3e-006 244 3 M2283_1.02 FOXP1 HWWADGTAAACAAAR 1.1e-048 1.5e-051 -117.01 0.0 54 486 205 577 0.11111 6.3e-054 242 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 2.7e-021 3.6e-024 -53.98 0.0 60 488 151 499 0.12295 1.5e-026 243 3 M2296_1.02 MAFK MWDASTCAGCAWWWW 1.2e0000 1.6e-003 -6.44 0.0 104 486 166 568 0.21399 6.6e-006 242 3 M2385_1.02 FOXP2 RWGTAAACAVR 3.4e-034 4.6e-037 -83.67 0.0 46 490 163 565 0.09388 1.9e-039 244 3 M2392_1.02 RFX2 GTYDCCATGGCAACVRNNN 2.6e0000 3.5e-003 -5.65 0.0 140 482 181 474 0.29046 1.5e-005 240 3 M4452_1.02 BATF TYYYRWWATGASTCA 6.1e-007 8.2e-010 -20.92 0.0 106 486 189 544 0.21811 3.4e-012 242 3 M4453_1.02 BCL11A ADGRGGAASTGAAAV 9.6e0000 1.3e-002 -4.36 0.0 300 486 386 553 0.61728 5.3e-005 242 3 M4462_1.02 GABPA VVCCGGAAGTG 1.0e-002 1.4e-005 -11.20 0.0 214 490 280 504 0.43673 5.6e-008 244 3 M4467_1.02 MEF2C DDKCYAAAAATAGMH 1.8e-009 2.3e-012 -26.78 0.0 72 486 157 575 0.14815 9.7e-015 242 3 M4484_1.02 ZNF143 CTGGGARTTGTAGTY 4.4e0000 5.8e-003 -5.15 0.0 216 486 244 450 0.44444 2.4e-005 242 3 M4522_1.02 ELK4 CCGGAAGYGS 2.8e0000 3.7e-003 -5.60 0.0 279 491 347 528 0.56823 1.5e-005 245 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 5.6e0000 7.5e-003 -4.89 0.0 284 486 362 541 0.58436 3.1e-005 242 3 M4537_1.02 E2F4 GGCGGGAARWTBVRR 5.3e-001 7.1e-004 -7.26 0.0 318 486 403 540 0.65432 2.9e-006 242 3 M4551_1.02 ZNF274 YTCAYACTGGAGAGAAA 5.7e-019 7.6e-022 -48.63 0.0 156 484 193 323 0.32231 3.2e-024 241 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 1.4e-056 1.9e-059 -135.24 0.0 52 486 215 583 0.10700 7.7e-062 242 3 M4572_1.02 MAFF TGCTGACTCAGCAWW 3.1e-013 4.1e-016 -35.42 0.0 268 486 367 494 0.55144 1.7e-018 242 3 M4604_1.02 ZNF263 RRGGAGGASGVVGRGGRGGRG 3.5e-001 4.7e-004 -7.67 0.0 288 480 371 532 0.60000 2.0e-006 239 3 M4612_1.02 CTCFL CCRSCAGGGGGCGCY 2.9e0000 3.9e-003 -5.55 0.0 216 486 229 418 0.44444 1.6e-005 242 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 3.7e-021 5.0e-024 -53.65 0.0 100 484 205 491 0.20661 2.1e-026 241 3 M4681_1.02 BACH2 TGCTGAGTCA 1.7e-009 2.3e-012 -26.80 0.0 275 491 369 509 0.56008 9.3e-015 245 3 M4692_1.02 SIX5 ACTACAAYTC 4.2e-002 5.6e-005 -9.79 0.0 75 491 114 469 0.15275 2.3e-007 245 3 M4698_1.02 HNF4A BTGRMCTTTGVHCYB 2.5e0000 3.3e-003 -5.72 0.0 184 486 257 550 0.37860 1.4e-005 242 3 M5287_1.02 ALX4 HTAATYNAATTAN 3.3e-108 4.4e-111 -254.11 0.0 44 488 243 511 0.09016 1.8e-113 243 3 M5291_1.02 ARX YTAATTNRATTAN 2.8e-131 3.7e-134 -307.23 0.0 46 488 266 494 0.09426 1.5e-136 243 3 M5307_1.02 BHLHE22 NAVCATATGTTT 1.7e0000 2.2e-003 -6.10 0.0 107 489 109 340 0.21881 9.2e-006 244 3 M5308_1.02 BHLHE23 AMCATATGBT 3.1e0000 4.1e-003 -5.49 0.0 81 491 93 371 0.16497 1.7e-005 245 3 M5322_1.02 CPEB1 TTTTTATT 2.5e-011 3.3e-014 -31.03 0.0 53 493 132 582 0.10751 1.4e-016 246 3 M5335_1.02 CUX2 ATCGATAHNDTTATYGAT 1.0e-189 1.3e-192 -441.81 0.0 39 483 256 353 0.08075 5.5e-195 241 3 M5342_1.02 DLX4 NTAATTRN 5.4e0000 7.2e-003 -4.94 0.0 395 493 498 575 0.80122 2.9e-005 246 3 M5348_1.02 DRGX NTAATYHAATTAN 2.0e-077 2.6e-080 -183.25 0.0 46 488 208 487 0.09426 1.1e-082 243 3 M5398_1.02 ERF ACCGGAAGTR 1.8e-001 2.4e-004 -8.34 0.0 15 491 35 457 0.03055 9.7e-007 245 3 M5420_1.02 ETV1 ACCGGAAGTD 6.5e-003 8.7e-006 -11.65 0.0 15 491 40 492 0.03055 3.6e-008 245 3 M5421_1.02 ETV2 AACCGGAAATR 2.5e-002 3.3e-005 -10.30 0.0 36 490 62 419 0.07347 1.4e-007 244 3 M5422_1.02 ETV3 ACCGGAAGTR 2.9e-001 3.8e-004 -7.86 0.0 15 491 37 511 0.03055 1.6e-006 245 3 M5425_1.02 ETV6 CCGGAASCGGAAGTR 1.1e-007 1.5e-010 -22.64 0.0 276 486 301 407 0.56790 6.1e-013 242 3 M5435_1.02 FOXB1 TCGCYGTGTCATTC 4.0e-009 5.3e-012 -25.96 0.0 105 487 160 423 0.21561 2.2e-014 243 3 M5446_1.02 FOXD4L2 RTAAACA 4.8e-055 6.4e-058 -131.69 0.0 38 494 181 585 0.07692 2.6e-060 246 3 M5460_1.02 FOXL1 RTAAACA 2.6e-082 3.5e-085 -194.48 0.0 44 494 228 579 0.08907 1.4e-087 246 3 M5497_1.02 GRHL1 AACCGGTYTAACCGGTT 8.9e-001 1.2e-003 -6.74 0.0 66 484 79 352 0.13636 4.9e-006 241 3 M5509_1.02 HEY1 GRCACGTGYC 9.7e0000 1.3e-002 -4.34 0.0 369 491 364 439 0.75153 5.3e-005 245 3 M5543_1.02 HOXB5 NHTAATKRNN 2.3e-001 3.0e-004 -8.11 0.0 67 491 123 592 0.13646 1.2e-006 245 3 M5544_1.02 HOXC10 DTTTWATKDB 2.5e-008 3.3e-011 -24.13 0.0 63 491 139 576 0.12831 1.3e-013 245 3 M5584_1.02 ISX YTAATCTAATTAR 9.0e-118 1.2e-120 -276.13 0.0 46 488 230 412 0.09426 4.9e-123 243 3 M5635_1.02 MNX1 TTTAATTRNH 7.3e-005 9.7e-008 -16.15 0.0 51 491 106 553 0.10387 4.0e-010 245 3 M5637_1.02 MSX1 TAATTGSWWTTTAATTRS 6.3e-007 8.5e-010 -20.89 0.0 53 483 93 403 0.10973 3.5e-012 241 3 M5660_1.02 NFIA TTGGCANNDTGCCAR 1.0e0000 1.4e-003 -6.59 0.0 192 486 158 303 0.39506 5.7e-006 242 3 M5662_1.02 NFIB TTGGCAHNDTGCCAR 1.6e0000 2.1e-003 -6.16 0.0 192 486 164 318 0.39506 8.8e-006 242 3 M5664_1.02 NFIX TTGGCANNNHGCCAR 6.0e-003 8.1e-006 -11.72 0.0 228 486 281 473 0.46914 3.3e-008 242 3 M5690_1.02 OLIG1 AMCATATGKT 5.1e-001 6.8e-004 -7.30 0.0 81 491 85 318 0.16497 2.8e-006 245 3 M5697_1.02 ONECUT3 DTTATYGATTTTTY 2.3e-116 3.0e-119 -272.90 0.0 55 487 271 497 0.11294 1.2e-121 243 3 M5714_1.02 PHOX2A TAATYYAATTA 7.7e-063 1.0e-065 -149.64 0.0 46 490 193 502 0.09388 4.2e-068 244 3 M5715_1.02 PHOX2B TAATYYAATTA 2.3e-053 3.0e-056 -127.84 0.0 46 490 181 505 0.09388 1.2e-058 244 3 M5740_1.02 POU4F1 ATGMATAATTAATG 7.1e-127 9.4e-130 -297.09 0.0 37 487 247 518 0.07598 3.9e-132 243 3 M5743_1.02 POU4F3 RTGMATWATTAATGAV 5.5e-106 7.3e-109 -248.99 0.0 39 485 232 520 0.08041 3.0e-111 242 3 M5753_1.02 PROX1 YAAGACGYCTTA 1.5e-006 2.1e-009 -20.00 0.0 93 489 96 260 0.19018 8.5e-012 244 3 M5941_1.02 UNCX NTAATYBAATTAN 2.9e-027 3.9e-030 -67.71 0.0 46 488 147 538 0.09426 1.6e-032 243 3 M5967_1.02 ZNF232 RTGTTAAAYGTAGATTAAG 6.3e0000 8.4e-003 -4.78 0.0 122 482 60 148 0.25311 3.5e-005 240 3 M5974_1.02 ZNF524 GGGTTCRAGGGT 9.2e0000 1.2e-002 -4.39 0.0 277 489 294 447 0.56646 5.1e-005 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 3.7e-087 5.0e-090 -205.62 0.0 55 491 260 581 0.11202 2.0e-092 245 3 M6123_1.02 (ZNF281)_(Mus_musculus)_(DBD_1.00) GRGKTGGGGGAGGGG 8.8e0000 1.2e-002 -4.44 0.0 374 486 413 490 0.76955 4.9e-005 242 3 M6139_1.02 AHR KCACGCRAH 2.5e-005 3.3e-008 -17.21 0.0 380 492 483 549 0.77236 1.4e-010 245 3 M6141_1.02 ALX1 TAATBYAATTAY 3.4e-008 4.6e-011 -23.81 0.0 45 489 106 544 0.09202 1.9e-013 244 3 M6144_1.02 TFAP2B BCCCBCRGGC 2.1e-002 2.8e-005 -10.49 0.0 279 491 376 556 0.56823 1.1e-007 245 3 M6146_1.02 TFAP2D ACGNGCCBCRGGCK 2.8e-001 3.7e-004 -7.90 0.0 279 487 279 406 0.57290 1.5e-006 243 3 M6147_1.02 ARID3A TWWAWTTTGATWYYVWTTAATH 1.1e-108 1.4e-111 -255.22 0.0 49 479 254 501 0.10230 6.0e-114 239 3 M6187_1.02 DDIT3 GGGGATTGCABBB 4.5e-008 6.1e-011 -23.53 0.0 202 488 323 572 0.41393 2.5e-013 243 3 M6191_1.02 E2F2 GGCGCGAAAC 2.1e-003 2.8e-006 -12.80 0.0 95 491 131 425 0.19348 1.1e-008 245 3 M6192_1.02 E2F3 SSCGCSAAAC 8.8e0000 1.2e-002 -4.44 0.0 381 491 371 435 0.77597 4.9e-005 245 3 M6194_1.02 E2F5 SGCGCSAAAH 7.3e0000 9.7e-003 -4.64 0.0 251 491 181 288 0.51120 4.0e-005 245 3 M6213_1.02 ERG ACCGGAARTSM 2.1e-003 2.8e-006 -12.77 0.0 36 490 72 484 0.07347 1.2e-008 244 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 1.3e-088 1.8e-091 -208.97 0.0 54 488 261 583 0.11066 7.3e-094 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 2.2e-043 2.9e-046 -104.85 0.0 54 486 188 536 0.11111 1.2e-048 242 3 M6237_1.02 FOXD3 AAACAAACA 2.8e-072 3.8e-075 -171.36 0.0 48 492 225 576 0.09756 1.5e-077 245 3 M6238_1.02 FOXF1 WAAATAAACAW 1.4e-099 1.9e-102 -234.21 0.0 64 490 288 560 0.13061 7.9e-105 244 3 M6239_1.02 FOXF2 HWADGTAAACA 3.3e-086 4.5e-089 -203.43 0.0 56 490 259 571 0.11429 1.8e-091 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 4.9e-130 6.5e-133 -304.37 0.0 39 491 268 575 0.07943 2.7e-135 245 3 M6242_1.02 FOXJ3 TAAACAWWAAMMA 6.6e-051 8.8e-054 -122.16 0.0 48 488 192 555 0.09836 3.6e-056 243 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 1.5e-051 1.9e-054 -123.67 0.0 54 488 212 589 0.11066 8.0e-057 243 3 M6245_1.02 FOXO1 AAAWWVWAAACAAVHH 6.8e-059 9.2e-062 -140.55 0.0 47 485 207 580 0.09691 3.8e-064 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 1.1e-071 1.5e-074 -170.01 0.0 50 488 232 589 0.10246 6.0e-077 243 3 M6247_1.02 FOXO4 MRTAAACAA 8.5e-020 1.1e-022 -50.53 0.0 46 492 138 576 0.09350 4.6e-025 245 3 M6250_1.02 FOXQ1 AAATAAACAATD 1.2e-063 1.6e-066 -151.48 0.0 51 489 207 519 0.10429 6.7e-069 244 3 M6276_1.02 HINFP DMSHHMGCGGACGTTV 1.1e-002 1.5e-005 -11.10 0.0 223 485 198 326 0.45979 6.2e-008 242 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 9.9e-099 1.3e-101 -232.28 0.0 55 487 263 535 0.11294 5.5e-104 243 3 M6289_1.02 HOXA9 WCATAAAYYRTH 5.9e-019 7.9e-022 -48.59 0.0 49 489 141 565 0.10020 3.2e-024 244 3 M6297_1.02 HOXB7 MATYAATCAA 1.4e-085 1.9e-088 -202.00 0.0 43 491 215 507 0.08758 7.6e-091 245 3 M6298_1.02 HOXB8 BMATTAATCAA 6.7e-067 9.0e-070 -158.99 0.0 50 490 205 500 0.10204 3.7e-072 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 3.4e-143 4.6e-146 -334.66 0.0 48 486 262 429 0.09877 1.9e-148 242 3 M6301_1.02 HOXD10 AATTAAARCA 8.2e-014 1.1e-016 -36.74 0.0 55 491 140 572 0.11202 4.5e-019 245 3 M6304_1.02 HOXD9 HMATNAAWYT 3.9e-001 5.3e-004 -7.55 0.0 53 491 97 560 0.10794 2.2e-006 245 3 M6321_1.02 KLF15 RSMKGGGAGDKGGGGSS 1.5e0000 2.1e-003 -6.19 0.0 346 484 431 541 0.71488 8.5e-006 241 3 M6322_1.02 KLF1 CAGGGTGKGGC 8.4e0000 1.1e-002 -4.48 0.0 352 490 445 563 0.71837 4.7e-005 244 3 M6329_1.02 LHX3 AAAATTAATTARY 4.6e-070 6.1e-073 -166.28 0.0 62 488 221 464 0.12705 2.5e-075 243 3 M6348_1.02 MTF1 MGKGCCGTGTGCAAADS 7.1e-008 9.6e-011 -23.07 0.0 144 484 198 426 0.29752 4.0e-013 241 3 M6360_1.02 NFE2L2 VRTGACTCAGCA 3.8e-010 5.1e-013 -28.31 0.0 105 489 210 590 0.21472 2.1e-015 244 3 M6364_1.02 NFATC3 RDTTTTCCA 1.1e0000 1.4e-003 -6.56 0.0 288 492 390 577 0.58537 5.8e-006 245 3 M6378_1.02 NKX3-1 WWTAAGTATWTWW 1.6e-138 2.2e-141 -323.89 0.0 40 488 269 532 0.08197 8.9e-144 243 3 M6399_1.02 ONECUT2 DKSWTKWTATKGATTTTWYYT 3.1e-128 4.2e-131 -300.21 0.0 52 480 279 499 0.10833 1.7e-133 239 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 3.4e-029 4.5e-032 -72.18 0.0 52 486 167 567 0.10700 1.9e-034 242 3 M6417_1.02 POU1F1 RWATATTCATKAR 4.3e-007 5.8e-010 -21.27 0.0 52 488 118 574 0.10656 2.4e-012 243 3 M6420_1.02 PLAG1 GGRGGSMHNWVKAGGGG 8.0e0000 1.1e-002 -4.54 0.0 298 484 362 517 0.61570 4.4e-005 241 3 M6426_1.02 POU3F2 CATRAATWWT 7.0e-085 9.3e-088 -200.39 0.0 49 491 243 575 0.09980 3.8e-090 245 3 M6438_1.02 PROP1 RASHAATTAAHWTVR 6.5e-011 8.7e-014 -30.07 0.0 66 486 148 557 0.13580 3.6e-016 242 3 M6442_1.02 PURA CCMBGCCCNCCMMYWCC 4.2e-003 5.7e-006 -12.08 0.0 330 484 452 575 0.68182 2.4e-008 241 3 M6451_1.02 RFX1 GTTGCYAGGSAA 2.1e-001 2.8e-004 -8.17 0.0 127 489 198 565 0.25971 1.2e-006 244 3 M6465_1.02 SMAD3 STGTCTGBCY 4.1e-002 5.5e-005 -9.80 0.0 151 491 240 589 0.30754 2.3e-007 245 3 M6485_1.02 SPIB ARAAASMGGAAS 5.4e0000 7.2e-003 -4.94 0.0 399 489 473 537 0.81595 3.0e-005 244 3 M6510_1.02 TEF TGTTTATRTAAMTK 6.7e-014 9.0e-017 -36.95 0.0 59 487 145 560 0.12115 3.7e-019 243 3 M6542_1.02 ZBTB6 VGRTGATRGAGCC 1.4e-002 1.9e-005 -10.88 0.0 212 488 288 524 0.43443 7.7e-008 243 3 M6546_1.02 ZFHX3 ATTAWTAATTA 4.2e-119 5.6e-122 -279.19 0.0 48 490 259 499 0.09796 2.3e-124 244 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).