Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATTGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 TATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAAA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACT
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCTGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGATGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATACCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.286 C 0.214 G 0.214 T 0.286


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M4629_1.02 NFE2 chr19 - 29688446 29688462 9.24e-10 0.000266 CATGACTCAGCAATTCC
M4629_1.02 NFE2 chr10 - 125621221 125621237 9.24e-10 0.000266 CATGACTCAGCAATTCC
M4629_1.02 NFE2 chr21 - 36382369 36382385 3.52e-08 0.00337 TATGACTCAGCAATTCC
M4629_1.02 NFE2 chrX - 41459907 41459923 3.52e-08 0.00337 TATGACTCAGCAATTCC
M4629_1.02 NFE2 chr19 + 1099641 1099657 3.52e-08 0.00337 tatgactcagcaattcc
M4629_1.02 NFE2 chr8 + 73346808 73346824 3.52e-08 0.00337 tatgactcagcaattcc
M4629_1.02 NFE2 chr5 + 34787229 34787245 4.48e-08 0.00368 tatgactcagcaattct
M4629_1.02 NFE2 chr17 - 72681282 72681298 6.61e-08 0.00475 TGTGACTCAGCAATTCC
M4629_1.02 NFE2 chr1 - 64398548 64398564 3.32e-07 0.0212 TATGACTCAGCAATAGC
M4629_1.02 NFE2 chr19 - 2614807 2614823 5.6e-07 0.0283 CATGACCCAGCAATTCC
M4629_1.02 NFE2 chr15 - 68285383 68285399 5.91e-07 0.0283 GATGACCCAGCAATTCC
M4629_1.02 NFE2 chr16 + 4515901 4515917 5.91e-07 0.0283 gatgacccagcaattcc
M4629_1.02 NFE2 chr21 + 43833653 43833669 8.48e-07 0.0288 tgtgacacagcaattcc
M4629_1.02 NFE2 chr20 + 37948137 37948153 8.64e-07 0.0288 agtgactgagcaattcc
M4629_1.02 NFE2 chr1 - 44472239 44472255 9.05e-07 0.0288 CGTGACCCAGCAATTCC
M4629_1.02 NFE2 chr16 + 84247961 84247977 9.43e-07 0.0288 gatgactcaacaattct
M4629_1.02 NFE2 chr15 + 89788107 89788123 1.09e-06 0.0288 aatgacccagcaattcc
M4629_1.02 NFE2 chr7 + 151514641 151514657 1.09e-06 0.0288 aatgacccagcaattcc
M4629_1.02 NFE2 chr5 + 180187953 180187969 1.09e-06 0.0288 aatgacccagcaattcc
M4629_1.02 NFE2 chr6 + 167811201 167811217 1.23e-06 0.0288 aatgcctcagcaattcc
M4629_1.02 NFE2 chr19 - 13637743 13637759 1.28e-06 0.0288 GGTGACTCAACAATTCC
M4629_1.02 NFE2 chr8 + 140473160 140473176 1.38e-06 0.0288 ggtgacacagcaagact
M4629_1.02 NFE2 chr1 - 150907680 150907696 1.67e-06 0.0288 TATGACGCAGCAATTCC
M4629_1.02 NFE2 chr11 + 65775100 65775116 1.89e-06 0.0288 tatgattcagcaattct
M4629_1.02 NFE2 chr9 - 83919486 83919502 2.25e-06 0.0288 CAAGACTCAGCAGCTTT
M4629_1.02 NFE2 chr16 + 4083479 4083495 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr6 - 7104973 7104989 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr2 + 10704364 10704380 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr1 - 12679036 12679052 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr19 + 13779982 13779998 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr14 - 21177586 21177602 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr10 - 21825551 21825567 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr22 - 25377861 25377877 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr22 - 28947377 28947393 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr10 + 32174512 32174528 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chrX - 41082060 41082076 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr2 + 43099970 43099986 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr18 + 48899893 48899909 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr14 + 52629243 52629259 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr6 + 53311455 53311471 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr11 + 68361894 68361910 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr17 + 72504968 72504984 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr11 + 75161055 75161071 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr17 + 78620275 78620291 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr16 + 86939844 86939860 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr14 + 90059290 90059306 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr14 - 92731818 92731834 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr10 - 110723447 110723463 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr13 - 113771874 113771890 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr7 - 133249091 133249107 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr8 + 133604998 133605014 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr6 + 166023722 166023738 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr5 + 172782682 172782698 2.71e-06 0.0288 tatgacccagcaattcc
M4629_1.02 NFE2 chr2 - 236767044 236767060 2.71e-06 0.0288 TATGACCCAGCAATTCC
M4629_1.02 NFE2 chr20 - 25238146 25238162 3.15e-06 0.0306 TATGACCCAGCAATTCT
M4629_1.02 NFE2 chr17 - 34872853 34872869 3.15e-06 0.0306 TATGACCCAGCAATTCT
M4629_1.02 NFE2 chr12 + 26026868 26026884 3.15e-06 0.0306 tatgacccagcaattct
M4629_1.02 NFE2 chr15 + 67531393 67531409 3.15e-06 0.0306 tatgacccagcaattct
M4629_1.02 NFE2 chr10 + 101950422 101950438 3.15e-06 0.0306 tatgacccagcaattct
M4629_1.02 NFE2 chr13 + 113771654 113771670 3.39e-06 0.0325 ggtgactgagcaagact
M4629_1.02 NFE2 chr4 + 184727626 184727642 3.48e-06 0.0328 taggactcagcaattct
M4629_1.02 NFE2 chr3 + 134676057 134676073 3.82e-06 0.0354 tattactcagcaattct
M4629_1.02 NFE2 chr17 - 17524304 17524320 4.1e-06 0.0362 TGTGACCCAGCAATTCC
M4629_1.02 NFE2 chr19 + 39149118 39149134 4.1e-06 0.0362 tgtgacccagcaattcc
M4629_1.02 NFE2 chr1 - 113943649 113943665 4.1e-06 0.0362 TGTGACCCAGCAATTCC
M4629_1.02 NFE2 chr3 + 9977088 9977104 4.55e-06 0.0397 TATGACACAGCAAACTG
M4629_1.02 NFE2 chr16 - 23751275 23751291 4.71e-06 0.0398 TGTGACCCAGCAATTCT
M4629_1.02 NFE2 chr12 + 111135454 111135470 4.71e-06 0.0398 tgtgacccagcaattct
M4629_1.02 NFE2 chr4 + 8843790 8843806 5.03e-06 0.0419 cataagtcagcaattcc
M4629_1.02 NFE2 chr5 - 78062793 78062809 5.7e-06 0.0468 TATGACTCTGCAGACCT
M4629_1.02 NFE2 chr17 - 76737501 76737517 6.04e-06 0.0489 CGTGACTCCGCGCTTTT
M4629_1.02 NFE2 chr17 + 18309333 18309349 6.33e-06 0.0505 catgtcacagcaattcc
M4629_1.02 NFE2 chr10 - 52245989 52246005 6.94e-06 0.0541 AGTAACTCAGCATTATT
M4629_1.02 NFE2 chr5 - 172782891 172782907 6.97e-06 0.0541 CGTGCGTCAGCAGTTTG
M4629_1.02 NFE2 chr19 + 38766712 38766728 7.48e-06 0.0573 tatgacacagcaactca
M4629_1.02 NFE2 chr16 + 70670394 70670410 7.84e-06 0.0593 catgactttgcaattct
M4629_1.02 NFE2 chr19 + 35289790 35289806 8.58e-06 0.064 aatgacaaagcaatact
M4629_1.02 NFE2 chr3 - 9977194 9977210 1e-05 0.0734 TGTGACTCAGCTAAAGT
M4629_1.02 NFE2 chr18 - 59882914 59882930 1.01e-05 0.0734 TGTGAGTCGGCAGATCT
M4629_1.02 NFE2 chr1 - 236531808 236531824 1.11e-05 0.0798 GGTGAGTCATCAAAACT
M4629_1.02 NFE2 chr1 + 236531814 236531830 1.28e-05 0.0897 gatgactcaccagcata
M4629_1.02 NFE2 chr21 - 34200737 34200753 1.35e-05 0.0897 TATGAGCCAGCAATTCC
M4629_1.02 NFE2 chr11 - 63893571 63893587 1.35e-05 0.0897 TATGAGCCAGCAATTCC
M4629_1.02 NFE2 chr9 - 137685587 137685603 1.35e-05 0.0897 CATGATCCAGCAATTCC
M4629_1.02 NFE2 chr21 + 36912107 36912123 1.35e-05 0.0897 catgatccagcaattcc
M4629_1.02 NFE2 chr5 + 1917567 1917583 1.36e-05 0.0897 ggtgacagagcaaaact
M4629_1.02 NFE2 chrX + 44657864 44657880 1.36e-05 0.0897 ggtgacagagcaaaact
M4629_1.02 NFE2 chr17 + 59442493 59442509 1.46e-05 0.0953 gatgacagagcaagacc
M4629_1.02 NFE2 chr5 - 142805542 142805558 1.52e-05 0.0973 CATGACCTAGCAATTCC
M4629_1.02 NFE2 chr6 + 492377 492393 1.52e-05 0.0973 catgacctagcaattcc
M4629_1.02 NFE2 chr19 - 5028599 5028615 1.57e-05 0.0981 CTTGACCCAGCAATTCC
M4629_1.02 NFE2 chr9 + 83919279 83919295 1.57e-05 0.0981 cttgacccagcaattcc
M4629_1.02 NFE2 chr17 - 67694023 67694039 1.67e-05 0.103 TAGGAGTCAGCAATTCT
M4629_1.02 NFE2 chrX + 44658008 44658024 1.71e-05 0.104 aatgacagagcaacttt
M4629_1.02 NFE2 chr3 + 190079314 190079330 1.77e-05 0.107 ggtgacaaagcaagact
M4629_1.02 NFE2 chr18 - 48905001 48905017 1.79e-05 0.107 GTTGTCTCAGCAATTCC
M4629_1.02 NFE2 chr20 + 63513385 63513401 1.92e-05 0.114 tgtgagccagcaattcc
M4629_1.02 NFE2 chr22 - 25377966 25377982 2.08e-05 0.117 GGTGACAGAGCAAGACC
M4629_1.02 NFE2 chr15 - 71084509 71084525 2.08e-05 0.117 GGTGACAGAGCAAGACC
M4629_1.02 NFE2 chr19 + 33159308 33159324 2.08e-05 0.117 ggtgacagagcaagacc
M4629_1.02 NFE2 chr11 + 68361797 68361813 2.08e-05 0.117 ggtgacagagcaagacc
M4629_1.02 NFE2 chr7 + 133110314 133110330 2.08e-05 0.117 ggtgacagagcaagacc
M4629_1.02 NFE2 chr6 - 3612916 3612932 2.13e-05 0.119 GATGAGTCATCTATTTT
M4629_1.02 NFE2 chr10 - 128074770 128074786 2.17e-05 0.12 CGTGACCTAGCAATTCC
M4629_1.02 NFE2 chr9 + 83919305 83919321 2.22e-05 0.121 aatgatccagcaattcc
M4629_1.02 NFE2 chr12 + 124470327 124470343 2.26e-05 0.121 cacgacccagcaattct
M4629_1.02 NFE2 chr17 - 8078171 8078187 2.36e-05 0.121 GGTGACAGAGCAAGACT
M4629_1.02 NFE2 chr6 + 18097386 18097402 2.36e-05 0.121 ggtgacagagcaagact
M4629_1.02 NFE2 chr1 + 27181980 27181996 2.36e-05 0.121 ggtgacagagcaagact
M4629_1.02 NFE2 chr12 + 53779826 53779842 2.36e-05 0.121 ggtgacagagcaagact
M4629_1.02 NFE2 chr1 + 85960859 85960875 2.36e-05 0.121 ggtgacagagcaagact
M4629_1.02 NFE2 chr10 + 114649377 114649393 2.36e-05 0.121 ggtgacagagcaagact
M4629_1.02 NFE2 chr6 + 124979474 124979490 2.44e-05 0.124 caagagtcagcagaaca
M4629_1.02 NFE2 chr5 - 36992637 36992653 2.46e-05 0.124 GATAACTCAGCCATTTG
M4629_1.02 NFE2 chr16 + 89455851 89455867 2.49e-05 0.125 tataacacagcaattcc
M4629_1.02 NFE2 chr1 - 48765744 48765760 2.65e-05 0.13 CATGAGTCAGTACATCA
M4629_1.02 NFE2 chr10 - 114359491 114359507 2.65e-05 0.13 GATGACTCAGATGAATG
M4629_1.02 NFE2 chr14 - 90320015 90320031 2.79e-05 0.136 GATGACACATCATACCC
M4629_1.02 NFE2 chr10 + 71844230 71844246 2.89e-05 0.14 cacaactcagcaattct
M4629_1.02 NFE2 chr17 + 3024517 3024533 3.01e-05 0.144 tatgaccaagcaattcc
M4629_1.02 NFE2 chr6 - 138177114 138177130 3.2e-05 0.152 GGTGACAGAGCATGACC
M4629_1.02 NFE2 chr13 - 20359535 20359551 3.31e-05 0.154 GGTGGCCCAGCAATTCC
M4629_1.02 NFE2 chr10 - 21825615 21825631 3.31e-05 0.154 AATGTCTCAGCTGCTTT
M4629_1.02 NFE2 chr19 - 30024172 30024188 3.43e-05 0.159 AATGAATAAGCAAAATG
M4629_1.02 NFE2 chr19 + 57789296 57789312 3.48e-05 0.159 gaggactaagcagagtt
M4629_1.02 NFE2 chr10 + 12984527 12984543 3.52e-05 0.159 tctgacccagcaattcc
M4629_1.02 NFE2 chr8 + 29248168 29248184 3.52e-05 0.159 tctgacccagcaattcc
M4629_1.02 NFE2 chr19 + 33821347 33821363 3.62e-05 0.162 GGTGAGTGAGCAGCCCT
M4629_1.02 NFE2 chr10 + 61632452 61632468 3.63e-05 0.162 AGTGACTCAGAACAGTA
M4629_1.02 NFE2 chr19 - 34214336 34214352 3.68e-05 0.162 GGTGACAGAGCAAGGCC
M4629_1.02 NFE2 chr18 + 59892269 59892285 3.68e-05 0.162 ggtgacagagcaaggcc
M4629_1.02 NFE2 chr12 + 109345582 109345598 3.71e-05 0.162 cgtaacccagcaattcc
M4629_1.02 NFE2 chr10 - 113077725 113077741 3.87e-05 0.167 GGCGACACAGCAAGACT
M4629_1.02 NFE2 chr5 - 178489805 178489821 3.92e-05 0.168 CATGAGTATGCAAATAC
M4629_1.02 NFE2 chr8 - 17616220 17616236 4.16e-05 0.176 GGTGACAGAGCAAGGCT
M4629_1.02 NFE2 chr15 - 40092392 40092408 4.24e-05 0.176 GCTGCCTCAGCAGTGTG
M4629_1.02 NFE2 chr5 + 122678836 122678852 4.32e-05 0.176 cctgactctgcagaaaa
M4629_1.02 NFE2 chrX + 71181028 71181044 4.35e-05 0.176 gatgacagagcgaaatt
M4629_1.02 NFE2 chr16 - 4984556 4984572 4.44e-05 0.176 TATGATCCAGCAATTCC
M4629_1.02 NFE2 chr3 - 14984809 14984825 4.44e-05 0.176 TATGATCCAGCAATTCC
M4629_1.02 NFE2 chr12 - 19708009 19708025 4.44e-05 0.176 TATGATCCAGCAATTCC
M4629_1.02 NFE2 chr17 + 45352024 45352040 4.44e-05 0.176 tatgatccagcaattcc
M4629_1.02 NFE2 chr17 - 57393638 57393654 4.44e-05 0.176 TATGATCCAGCAATTCC
M4629_1.02 NFE2 chr10 - 102545468 102545484 4.44e-05 0.176 TATGATCCAGCAATTCC
M4629_1.02 NFE2 chr1 + 224258519 224258535 4.44e-05 0.176 tatgatccagcaattcc
M4629_1.02 NFE2 chr6 - 83822993 83823009 4.98e-05 0.189 TATGACCTAGCAATTCC
M4629_1.02 NFE2 chr5 - 90565710 90565726 4.98e-05 0.189 TATGACCTAGCAATTCC
M4629_1.02 NFE2 chr10 + 92559243 92559259 4.98e-05 0.189 tatgacctagcaattcc
M4629_1.02 NFE2 chr5 - 126968259 126968275 4.98e-05 0.189 TATGACCTAGCAATTCC
M4629_1.02 NFE2 chr7 + 133110482 133110498 4.98e-05 0.189 tatgacctagcaattcc
M4629_1.02 NFE2 chr1 + 234340688 234340704 4.98e-05 0.189 tatgacctagcaattcc
M4629_1.02 NFE2 chr12 - 122159100 122159116 5.08e-05 0.191 CGTGTGTCAGCACGTCA
M4629_1.02 NFE2 chr4 + 8324148 8324164 5.12e-05 0.191 tttgacccagcaattcc
M4629_1.02 NFE2 chr9 + 130964075 130964091 5.12e-05 0.191 tttgacccagcaattcc
M4629_1.02 NFE2 chr3 + 47556687 47556703 5.29e-05 0.196 ggtaactctgcaatctt
M4629_1.02 NFE2 chr6 + 27633373 27633389 5.48e-05 0.201 tgtgactcatcaagcag
M4629_1.02 NFE2 chrX + 71181297 71181313 5.5e-05 0.201 gctgaggcagcagaatc
M4629_1.02 NFE2 chr14 + 96699834 96699850 5.6e-05 0.201 tatgacctagcaattct
M4629_1.02 NFE2 chr14 - 99797470 99797486 5.6e-05 0.201 TATGACCTAGCAATTCT
M4629_1.02 NFE2 chr16 - 84248037 84248053 5.64e-05 0.201 CATGAAGCAGCACTGTG
M4629_1.02 NFE2 chr5 - 127023904 127023920 5.64e-05 0.201 GGTGACTAAGCTTTGGC
M4629_1.02 NFE2 chr1 + 124961616 124961632 5.72e-05 0.201 catcacaaagcagtttc
M4629_1.02 NFE2 chr14 + 52629064 52629080 5.74e-05 0.201 aatgagacatcacatct
M4629_1.02 NFE2 chr13 - 97946040 97946056 5.76e-05 0.201 TTTGACCCAGCAATTCT
M4629_1.02 NFE2 chr1 - 165854440 165854456 5.78e-05 0.201 TGTGACTAATCAGGTCC
M4629_1.02 NFE2 chr1 - 225654816 225654832 6.1e-05 0.211 CTTGACTCAGCTGGGAT
M4629_1.02 NFE2 chr17 - 61570192 61570208 6.21e-05 0.212 TGTGATCCAGCAATTCC
M4629_1.02 NFE2 chr10 + 120975276 120975292 6.21e-05 0.212 tgtgatccagcaattcc
M4629_1.02 NFE2 chr22 + 45616732 45616748 6.66e-05 0.226 tatgactgagtactttt
M4629_1.02 NFE2 chr11 + 69208555 69208571 6.78e-05 0.229 ggtgactgagctccctc
M4629_1.02 NFE2 chr1 + 230494204 230494220 6.92e-05 0.233 tgtgacctagcaattcc
M4629_1.02 NFE2 chr13 + 27211472 27211488 7.09e-05 0.233 caagagttagcaattcc
M4629_1.02 NFE2 chr1 - 9703887 9703903 7.11e-05 0.233 TAGGACCCAGCAATTCC
M4629_1.02 NFE2 chr13 - 99693089 99693105 7.11e-05 0.233 TAAGACCCAGCAATTCC
M4629_1.02 NFE2 chr14 + 61651521 61651537 7.14e-05 0.233 tatgccccagcaattcc
M4629_1.02 NFE2 chr12 - 111433026 111433042 7.14e-05 0.233 TATGCCCCAGCAATTCC
M4629_1.02 NFE2 chr1 + 53994590 53994606 7.31e-05 0.237 gctgagtcaggagaatt
M4629_1.02 NFE2 chrX + 153937319 153937335 7.39e-05 0.239 CATGACACAGGAAGGTA
M4629_1.02 NFE2 chr3 + 134676006 134676022 7.46e-05 0.24 tactactcagcaattcc
M4629_1.02 NFE2 chr17 + 79899969 79899985 7.72e-05 0.247 catgccacagcatggct
M4629_1.02 NFE2 chr19 + 1886525 1886541 7.83e-05 0.247 agtgacagagcaagaAG
M4629_1.02 NFE2 chr21 + 32258638 32258654 7.83e-05 0.247 CGGTACTCAGCAAAATT
M4629_1.02 NFE2 chr12 + 364827 364843 8.21e-05 0.252 tataacccagcaattcc
M4629_1.02 NFE2 chr16 - 14089650 14089666 8.21e-05 0.252 TATAACCCAGCAATTCC
M4629_1.02 NFE2 chr1 + 48765537 48765553 8.21e-05 0.252 tataacccagcaattcc
M4629_1.02 NFE2 chr15 + 66222961 66222977 8.21e-05 0.252 tataacccagcaattcc
M4629_1.02 NFE2 chr17 + 40325148 40325164 8.3e-05 0.252 gatgaggcaggagaatc
M4629_1.02 NFE2 chr18 + 49523660 49523676 8.3e-05 0.252 gctgagtcaggaaaatt
M4629_1.02 NFE2 chr5 + 142805659 142805675 8.3e-05 0.252 AATGAGGCAGCTGTAAC
M4629_1.02 NFE2 chr16 + 70670606 70670622 8.55e-05 0.257 cataactgagcaaaaag
M4629_1.02 NFE2 chr6 - 138176960 138176976 8.55e-05 0.257 GATTTCTCAGCAGAAAC
M4629_1.02 NFE2 chr2 - 10704151 10704167 8.61e-05 0.258 AATGACTAATCATGTAG
M4629_1.02 NFE2 chr15 + 40092722 40092738 8.7e-05 0.258 AGTGGCTCACCAGATTG
M4629_1.02 NFE2 chr20 + 25237967 25237983 8.73e-05 0.258 ggtgactcatccttgtg
M4629_1.02 NFE2 chr6 - 7685062 7685078 8.82e-05 0.258 CCTCACTCAGCAAAACA
M4629_1.02 NFE2 chr10 - 75585506 75585522 8.82e-05 0.258 TATGACCCAGTAATTCC
M4629_1.02 NFE2 chr19 - 50366634 50366650 8.88e-05 0.258 AATAACTCATCAATGCC
M4629_1.02 NFE2 chr14 - 90319848 90319864 8.88e-05 0.258 TATCACCCAGCAATTCC
M4629_1.02 NFE2 chr15 + 75349759 75349775 9.3e-05 0.269 gctgagacagcaccatt
M4629_1.02 NFE2 chr22 + 28972389 28972405 9.55e-05 0.271 ttttactcagcatattc
M4629_1.02 NFE2 chr10 - 12984308 12984324 9.58e-05 0.271 AATGACTCATGATGTCG
M4629_1.02 NFE2 chr5 + 177837711 177837727 9.65e-05 0.271 AATCACTTAGCAGAGTC
M4629_1.02 NFE2 chr6 - 38044849 38044865 9.74e-05 0.271 ATTGTCTCAGCAGAAAT
M4629_1.02 NFE2 chr12 + 122925387 122925403 9.74e-05 0.271 tgggacccagcaattcc
M4629_1.02 NFE2 chr22 - 33736162 33736178 9.78e-05 0.271 TGTGGCCCAGCAATTCC
M4629_1.02 NFE2 chr16 + 10809855 10809871 9.78e-05 0.271 tgtggcccagcaattcc
M4629_1.02 NFE2 chr12 + 122158904 122158920 9.78e-05 0.271 tgtggcccagcaattcc
M4629_1.02 NFE2 chr1 - 229919754 229919770 9.81e-05 0.271 CGTGCCACAGCACTCCA

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_18 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M4629_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_18 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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