Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
AYTCYG | 6 | ACTCTG |
TAAATAAA | 8 | TAAATAAA |
TCTCAAAA | 8 | TCTCAAAA |
CCYAGS | 6 | CCCAGC |
AGAGCRAR | 8 | AGAGCAAG |
AATTCCAC | 8 | AATTCCAC |
CCAARAGA | 8 | CCAAGAGA |
KGAAAACA | 8 | TGAAAACA |
GAGWC | 5 | GAGAC |
ACYTGTA | 7 | ACTTGTA |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background):
A 0.294 C 0.206 G 0.206 T 0.294
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
TCTCAAAA | DREME-3 | chr10 | - | 194424 | 194431 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr12 | + | 364775 | 364782 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr12 | - | 365066 | 365073 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | + | 922545 | 922552 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | + | 1099576 | 1099583 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | + | 1099892 | 1099899 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | - | 3022531 | 3022538 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr17 | + | 7450033 | 7450040 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | - | 8078160 | 8078167 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr17 | + | 9255522 | 9255529 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | + | 9604745 | 9604752 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 10103447 | 10103454 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | - | 10103645 | 10103652 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | - | 10798843 | 10798850 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | - | 11533273 | 11533280 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr16 | + | 12062372 | 12062379 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 12679096 | 12679103 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | + | 13637683 | 13637690 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | + | 14227751 | 14227758 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr16 | - | 14391203 | 14391210 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr3 | + | 14628745 | 14628752 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | - | 14997253 | 14997260 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | - | 15018542 | 15018549 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | - | 15575770 | 15575777 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr17 | + | 16406787 | 16406794 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chrX | + | 16603410 | 16603417 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | - | 17095776 | 17095783 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 17217012 | 17217019 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | - | 17217157 | 17217164 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | - | 17217220 | 17217227 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | + | 17740570 | 17740577 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | + | 18097406 | 18097413 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 19187817 | 19187824 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | + | 19188014 | 19188021 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | - | 19255635 | 19255642 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 21464818 | 21464825 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr16 | + | 21515171 | 21515178 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr16 | + | 21572538 | 21572545 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr16 | - | 21821023 | 21821030 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr8 | + | 21954629 | 21954636 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 22980353 | 22980360 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 24144213 | 24144220 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 24474427 | 24474434 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr8 | + | 26253869 | 26253876 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | - | 27326982 | 27326989 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr16 | - | 27663456 | 27663463 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | + | 29505921 | 29505928 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | - | 29688481 | 29688488 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr16 | - | 30570766 | 30570773 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr16 | - | 30642519 | 30642526 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 31105863 | 31105870 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | - | 31755165 | 31755172 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | - | 31755375 | 31755382 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr20 | - | 32118649 | 32118656 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | + | 32157973 | 32157980 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | + | 32158086 | 32158093 | 2.74e-05 | 0.0672 | TCTCAaaa |
TCTCAAAA | DREME-3 | chr10 | - | 32174633 | 32174640 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 32211588 | 32211595 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | + | 32367431 | 32367438 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | + | 32699904 | 32699911 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | - | 32767141 | 32767148 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | - | 32988909 | 32988916 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | + | 33123067 | 33123074 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | - | 33150778 | 33150785 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 33378135 | 33378142 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | - | 33821510 | 33821517 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | + | 34234758 | 34234765 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | + | 34881420 | 34881427 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr15 | + | 34959970 | 34959977 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | + | 35331785 | 35331792 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 35380341 | 35380348 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | - | 35386171 | 35386178 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | - | 35964624 | 35964631 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | + | 36019697 | 36019704 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | - | 36019806 | 36019813 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr21 | + | 36123183 | 36123190 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | + | 36644007 | 36644014 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr21 | + | 36912067 | 36912074 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | + | 37160337 | 37160344 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | + | 37230380 | 37230387 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr21 | - | 37275041 | 37275048 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | + | 37495326 | 37495333 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | + | 38667234 | 38667241 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | + | 38766462 | 38766469 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | - | 39117193 | 39117200 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 39662385 | 39662392 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | + | 40103772 | 40103779 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | + | 40325246 | 40325253 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | - | 40346540 | 40346547 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | + | 40567292 | 40567299 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | - | 40795413 | 40795420 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 41082092 | 41082099 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | + | 41282457 | 41282464 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | - | 42916971 | 42916978 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr19 | - | 43709420 | 43709427 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 45011799 | 45011806 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr20 | + | 45349380 | 45349387 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 45395620 | 45395627 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr22 | + | 45616854 | 45616861 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr18 | + | 46130718 | 46130725 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | - | 47544548 | 47544555 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr17 | - | 47544727 | 47544734 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr12 | - | 48866626 | 48866633 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr17 | - | 49136559 | 49136566 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr18 | + | 49506599 | 49506606 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr18 | - | 49515226 | 49515233 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr18 | + | 49523758 | 49523765 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | - | 50366846 | 50366853 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr12 | + | 50617804 | 50617811 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr13 | + | 51411208 | 51411215 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr4 | + | 52621960 | 52621967 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 52847883 | 52847890 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr12 | + | 53664338 | 53664345 | 2.74e-05 | 0.0672 | TCTCAAaa |
TCTCAAAA | DREME-3 | chr12 | - | 53664407 | 53664414 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr12 | + | 53779846 | 53779853 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | + | 53994689 | 53994696 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | + | 55463631 | 55463638 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr12 | + | 56220012 | 56220019 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr12 | - | 57258354 | 57258361 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr17 | - | 57393697 | 57393704 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | + | 57659972 | 57659979 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr19 | + | 57789530 | 57789537 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | + | 59442782 | 59442789 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr11 | + | 59703686 | 59703693 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr18 | + | 59892289 | 59892296 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr14 | + | 61651370 | 61651377 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | + | 61838539 | 61838546 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | - | 66760125 | 66760132 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr11 | - | 67122689 | 67122696 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr16 | + | 67555248 | 67555255 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | + | 67699179 | 67699186 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chrX | + | 68078979 | 68078986 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chrX | + | 68079212 | 68079219 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr2 | - | 69383638 | 69383645 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | + | 69947103 | 69947110 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr16 | + | 70670266 | 70670273 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr15 | - | 70866161 | 70866168 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | + | 71116779 | 71116786 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chrX | + | 71181048 | 71181055 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr17 | + | 72505201 | 72505208 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | - | 72580490 | 72580497 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 72720024 | 72720031 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr16 | + | 72904362 | 72904369 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr12 | - | 73464616 | 73464623 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | - | 73622338 | 73622345 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 73792721 | 73792728 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | - | 73883203 | 73883210 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | - | 73898067 | 73898074 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr2 | + | 74176759 | 74176766 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr15 | - | 75217794 | 75217801 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr15 | - | 75217974 | 75217981 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr15 | + | 75349809 | 75349816 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 77742955 | 77742962 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 78028036 | 78028043 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | - | 78028201 | 78028208 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr15 | + | 78404984 | 78404991 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr16 | - | 79011505 | 79011512 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr13 | - | 80358339 | 80358346 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr16 | + | 80940224 | 80940231 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr16 | + | 81422304 | 81422311 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | + | 86201260 | 86201267 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | - | 86796536 | 86796543 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | - | 86796590 | 86796597 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr9 | - | 87126047 | 87126054 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr13 | - | 87185363 | 87185370 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 87285082 | 87285089 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 87555094 | 87555101 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | + | 87621435 | 87621442 | 2.74e-05 | 0.0672 | TCTCaaaa |
TCTCAAAA | DREME-3 | chr10 | + | 88420006 | 88420013 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr16 | - | 89455992 | 89455999 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr15 | + | 89788079 | 89788086 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr14 | + | 90059521 | 90059528 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr15 | - | 90182639 | 90182646 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr12 | + | 90561057 | 90561064 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr12 | - | 95735952 | 95735959 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 96818939 | 96818946 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | + | 97635741 | 97635748 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | + | 101751967 | 101751974 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | - | 101752211 | 101752218 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | + | 102387803 | 102387810 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr14 | - | 102623422 | 102623429 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | + | 103000232 | 103000239 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | - | 103000467 | 103000474 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr10 | + | 103359648 | 103359655 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr7 | + | 105321890 | 105321897 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | + | 108155486 | 108155493 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr12 | - | 112328152 | 112328159 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr12 | + | 112334384 | 112334391 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | - | 113077714 | 113077721 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | - | 113113576 | 113113583 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | + | 115644593 | 115644600 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | + | 116938295 | 116938302 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr11 | + | 118578157 | 118578164 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr11 | - | 119038566 | 119038573 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr12 | + | 122513190 | 122513197 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr9 | - | 124337990 | 124337997 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | + | 125753693 | 125753700 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | - | 126819503 | 126819510 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | + | 127023726 | 127023733 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr10 | + | 128074662 | 128074669 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr2 | + | 128228020 | 128228027 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr9 | - | 130700372 | 130700379 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 132992770 | 132992777 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 134662155 | 134662162 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | - | 138177103 | 138177110 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 138525523 | 138525530 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | - | 139490129 | 139490136 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr8 | + | 140473013 | 140473020 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr8 | + | 140473180 | 140473187 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | - | 140493706 | 140493713 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | - | 149308541 | 149308548 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | + | 149541093 | 149541100 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 149556207 | 149556214 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 149556400 | 149556407 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 149963122 | 149963129 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 149963293 | 149963300 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | - | 150907723 | 150907730 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chrX | + | 153937191 | 153937198 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | - | 157467563 | 157467570 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr7 | + | 158785421 | 158785428 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr6 | + | 163553002 | 163553009 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr6 | - | 163553116 | 163553123 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr3 | + | 172143903 | 172143910 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | + | 175559110 | 175559117 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr5 | - | 175559323 | 175559330 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 175899065 | 175899072 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | - | 177345783 | 177345790 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr5 | + | 177464441 | 177464448 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr3 | + | 190079334 | 190079341 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr4 | + | 190112101 | 190112108 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr3 | + | 193484305 | 193484312 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr3 | - | 195818957 | 195818964 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | + | 224258491 | 224258498 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 226221558 | 226221565 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | - | 226221757 | 226221764 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | + | 226252276 | 226252283 | 2.74e-05 | 0.0672 | tctcaaaa |
TCTCAAAA | DREME-3 | chr1 | - | 229919722 | 229919729 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | - | 245044514 | 245044521 | 2.74e-05 | 0.0672 | TCTCAAAA |
TCTCAAAA | DREME-3 | chr1 | - | 245044591 | 245044598 | 2.74e-05 | 0.0672 | TCTCAAAA |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_13 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background --motif TCTCAAAA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_13 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.outsidePolsteinDNase.summitPlusMinus250bp.MemeChipResults/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.