******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr14:95452413-95452913 1.0000 100 chr16:66549347-66549847 1.0000 100 chrX:48834537-48835037 1.0000 100 chr10:97542226-97542726 1.0000 100 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chr10:96640914-96641414 1.0000 100 chr4:147616942-147617442 1.0000 100 chr22:42473819-42474319 1.0000 100 chr20:2646896-2647396 1.0000 100 chr6:73461335-73461835 1.0000 100 chr10:74418420-74418920 1.0000 100 chr8:127914211-127914711 1.0000 100 chr17:49368166-49368666 1.0000 100 chr4:107036053-107036553 1.0000 100 chr5:58460913-58461413 1.0000 100 chr14:77040207-77040707 1.0000 100 chr7:149771732-149772232 1.0000 100 chr6:90369148-90369648 1.0000 100 chr17:76842116-76842616 1.0000 100 chr13:19863590-19864090 1.0000 100 chr21:32258605-32259105 1.0000 100 chr5:142233607-142234107 1.0000 100 chr4:84582169-84582669 1.0000 100 chr17:35763669-35764169 1.0000 100 chr15:72473916-72474416 1.0000 100 chrX:135625982-135626482 1.0000 100 chr11:71928313-71928813 1.0000 100 chr16:1610665-1611165 1.0000 100 chr19:55117887-55118387 1.0000 100 chr17:68511809-68512309 1.0000 100 chr8:37892197-37892697 1.0000 100 chrX:129984518-129985018 1.0000 100 chr3:39383773-39384273 1.0000 100 chr12:131454338-13145483 1.0000 100 chr1:44842881-44843381 1.0000 100 chr6:36642753-36643253 1.0000 100 chr17:8093649-8094149 1.0000 100 chr11:57527031-57527531 1.0000 100 chr1:65002571-65003071 1.0000 100 chr17:48816705-48817205 1.0000 100 chr1:149899379-149899879 1.0000 100 chr8:12753910-12754410 1.0000 100 chr7:10973389-10973889 1.0000 100 chr17:76737309-76737809 1.0000 100 chr1:15876241-15876741 1.0000 100 chr15:40092246-40092746 1.0000 100 chr5:160243018-160243518 1.0000 100 chrX:123770199-123770699 1.0000 100 chr16:21820747-21821247 1.0000 100 chr22:17084613-17085113 1.0000 100 chr16:30052468-30052968 1.0000 100 chr14:102639271-10263977 1.0000 100 chr18:48873506-48874006 1.0000 100 chr1:111747264-111747764 1.0000 100 chr1:236531605-236532105 1.0000 100 chr21:33642266-33642766 1.0000 100 chr6:142885047-142885547 1.0000 100 chr9:35102935-35103435 1.0000 100 chr17:50139926-50140426 1.0000 100 chr3:63343712-63344212 1.0000 100 chr1:116556488-116556988 1.0000 100 chrX:150692743-150693243 1.0000 100 chr6:7684864-7685364 1.0000 100 chr16:27203571-27204071 1.0000 100 chr20:25237860-25238360 1.0000 100 chr10:114359304-11435980 1.0000 100 chr17:34706005-34706505 1.0000 100 chr3:9976916-9977416 1.0000 100 chr19:35869991-35870491 1.0000 100 chr10:12656443-12656943 1.0000 100 chr7:143345312-143345812 1.0000 100 chr16:30570495-30570995 1.0000 100 chr1:6404492-6404992 1.0000 100 chr19:35881941-35882441 1.0000 100 chr1:145977545-145978045 1.0000 100 chr18:21704812-21705312 1.0000 100 chr17:75855458-75855958 1.0000 100 chr5:160008634-160009134 1.0000 100 chr1:116878999-116879499 1.0000 100 chr19:43626069-43626569 1.0000 100 chr11:74749429-74749929 1.0000 100 chr6:3612740-3613240 1.0000 100 chr20:52105095-52105595 1.0000 100 chr15:74433854-74434354 1.0000 100 chr16:52191435-52191935 1.0000 100 chr21:37435163-37435663 1.0000 100 chr9:128192577-128193077 1.0000 100 chr21:45981028-45981528 1.0000 100 chr21:33025531-33026031 1.0000 100 chr19:16660212-16660712 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.239 C 0.261 G 0.261 T 0.239 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZNF140.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/background): A 0.232 C 0.268 G 0.268 T 0.232 ******************************************************************************** ******************************************************************************** MOTIF TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK MEME-1 width = 45 sites = 74 llr = 4085 E-value = 7.1e-1406 ******************************************************************************** -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK MEME-1 Description -------------------------------------------------------------------------------- Simplified A 1118::19::19:::9:::9:::a:::a:::a:::9:1:9::132 pos.-specific C 11:::1:::::::::::::::::::::::::::::::::::::11 probability G :::::::::::::::::::::::::::::::::::::::::::13 matrix T 88929991aa91aaa:aaa:aaa:aaa:aaa:aaa1a9a199955 bits 2.1 * ** ** *** * * * * 1.9 ** *** *** ******************* 1.7 ** ********************************** 1.5 * *************************************** Relative 1.3 ***************************************** Entropy 1.1 ******************************************* (79.6 bits) 0.8 ******************************************* 0.6 ******************************************* 0.4 ********************************************* 0.2 ********************************************* 0.0 --------------------------------------------- Multilevel TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT consensus AG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------------------------------- chr16:30570495-30570995 + 31 2.80e-29 gGGGCTAtta tttatttatttatttatttatttatttatttatttatttattttt gagacggagt chr12:131454338-13145483 - 15 2.80e-29 CTTTGTTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT GATAATTGGG chr20:2646896-2647396 + 25 2.80e-29 CTGAatttat tttatttatttatttatttatttatttatttatttatttattttt gagatggaat chr1:24593620-24594120 + 41 2.80e-29 AGAGCGAtta tttatttatttatttatttatttatttatttatttatttattttt tattttgaga chr1:84891991-84892491 - 22 2.80e-29 TTAGTTTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT GAGACACAGT chr7:69412840-69413340 + 32 2.80e-29 GCCTAACTCC tttatttatttatttatttatttatttatttatttatttatttTT Attttttgag chr17:64699479-64699979 - 26 2.80e-29 TTGTAATCTT TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT GGGACAGAGT chr2:121266648-121267148 + 38 2.80e-29 tttttcatta tttatttatttatttatttatttatttatttatttatttattttt gagatggagt chr2:65033612-65034112 + 40 2.80e-29 GAAAtattta tttatttatttatttatttatttatttatttatttatttattttt tgagacagag chr5:160008634-160009134 - 20 5.60e-29 TCACTATTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TTTTGAGACA chr1:6404492-6404992 - 18 5.60e-29 GTCACTTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TTGAGACGGA chr14:102639271-10263977 + 35 5.60e-29 tttttattta tttatttatttatttatttatttatttatttatttatttatttat tgagatggag chr17:8093649-8094149 - 23 5.60e-29 ATTTGTTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TATTCTTTGA chr6:73461335-73461835 - 14 5.60e-29 TTTATTTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TTATTTATTT chr19:48782549-48783049 + 35 5.60e-29 ACCttattta tttatttatttatttatttatttatttatttatttatttatttat ttattgaaac chr20:4613025-4613525 - 30 5.60e-29 CCACTTATTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TTTTGTTAGC chr17:4407703-4408203 - 24 5.60e-29 GCCCTTTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TTTGAGACGG chr6:134672888-134673388 - 14 5.60e-29 CACTATTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TTTTGAGACG chr4:87084303-87084803 - 49 5.60e-29 TTATTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT TGGAGACATA chrX:102494847-102495347 + 36 5.60e-29 tttttattta tttatttatttatttatttatttatttatttatttatttatttat tttgaaacag chr18:48873506-48874006 + 33 8.83e-29 TTCTCTGTGa tttatttatttatttatttatttatttatttatttatttattttg agacggagtt chr8:37892197-37892697 + 31 8.83e-29 tttatttata tttatttatttatttatttatttatttatttatttatttattttg agacggagtt chrX:120664487-120664987 + 35 8.83e-29 CACTGTttta tttatttatttatttatttatttatttatttatttatttattttg agacagggtc chr10:21241020-21241520 - 24 8.83e-29 GATTTTTATT TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG CTGGCATCGG chr22:20961244-20961744 - 26 8.83e-29 GCCAGTCTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG AGACGGACTC chr4:110210905-110211405 - 26 8.83e-29 ACTATCTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG AGGCGGAGTT chr5:160243018-160243518 - 25 1.16e-28 CTTTCATTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTA AGACATTGTC chr5:176005687-176006187 + 34 1.16e-28 ttcttattta tttatttatttatttatttatttatttatttatttatttatttTa gacggagtct chr7:149406464-149406964 - 21 1.16e-28 TTTAGCTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTA AGGTCTTGCA chr2:223837975-223838475 + 52 1.49e-28 CCCCCattta tttatttatttatttatttatttatttatttatttatttatttag agac chr16:30052468-30052968 - 29 2.65e-28 ATATTTTATT TATATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT GAGACGGAGT chr3:86969446-86969946 + 34 2.97e-28 CCTCATttta tttatttatttatttatttatttatttatttatttatttatttTC TGTGGAGATC chr10:101258431-10125893 + 34 2.97e-28 TTTATTttta tttatttatttatttatttatttatttatttatttatttattttc gagacatagt chrX:123770199-123770699 - 30 5.34e-28 GTAACACCAC TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTCT CTCTCTCTCT chr7:102391039-102391539 - 26 6.88e-28 AGCCTAATAT TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGG TAGAGCTGGA chr20:2172167-2172667 + 35 6.88e-28 catcacttta tttatttatttatttatttatttatttatttatttatttatttac ttgctttttt chr22:42473819-42474319 + 33 7.44e-28 ttatttattt attatttatttatttatttatttatttatttatttatttattttt gagacagagt chr21:32493540-32494040 + 35 9.53e-28 AGGCTTttta tttatttatttatttatttatttatttatttatttatttatttga gacgcagtct chr19:45653162-45653662 - 22 9.53e-28 ATTTGTTTAT TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGA GACAGAGTCT chr1:984382-984882 + 33 9.53e-28 ttccttctta tttatttatttatttatttatttatttatttatttatttatttga gatggggttt chr19:14556879-14557379 + 35 1.43e-27 TTGGTCTAAT Cttatttatttatttatttatttatttatttatttatttattttg agacagggtc chrX:135625982-135626482 + 55 2.27e-27 tttatattta tttatctatttatttatttatttatttatttatttatttatttat t chr8:97822296-97822796 + 33 3.89e-27 TGACTTCTAT tttatttatttatttatttatttatttatttatttatttattAAG GCACAACCAT chr1:33458894-33459394 + 32 4.98e-27 atatggttta tatttttatttatttatttatttatttatttatttatttatttat tgagacagag chr19:44551793-44552293 - 30 4.98e-27 GTCATCTATT TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTCAT TCTTTAGCTG chr17:35763669-35764169 - 27 6.14e-27 TAATTTTTCA TGTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG AGACAGGGTC chr5:80307739-80308239 + 29 1.90e-26 TATTATTCTC TCTTtttatttatttatttatttatttatttatttatttatttTG Gagagataac chr17:49368166-49368666 - 20 2.88e-26 CTGGCATTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATCATT GAGGCGGAGT chr15:66461249-66461749 - 27 4.02e-26 TCTATTATTA TTTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTAG AGACAGAGTC chr16:21820747-21821247 + 36 4.52e-26 CTTGACttta tttatttatttatttatttatttatttatttatttattttctttt gagaccgagt chr21:32258605-32259105 + 34 4.52e-26 CTGCATttta tttatttatttatttatttatttatttatttatttatttaCTTAC TTACTTACTT chr2:190850574-190851074 + 34 5.58e-26 GTTGGCTTGC tttatttatttatttatttatttatttatttatttatatttttta agacggagtc chr3:41158133-41158633 - 26 7.55e-26 AATGGAGGCA TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATCTCA GATGGAGTTT chr19:48919216-48919716 + 36 7.55e-26 CTCTAGGACT CttatttatttatttatttatttatttatttatttatttattCtg agacggagtc chr22:38768458-38768958 - 26 2.27e-25 ATATTTATTA ATTAATTATTTATTTATTTATTTATTTATTTATTTATTTATTTTC TTGAGACAAA chr22:46530961-46531461 + 21 1.22e-24 TTTCTGCGCA TCCTtttatttatttatttatttatttatttatttatttattttg agacagtctc chr7:135653636-135654136 + 26 1.75e-24 AGTGTTTTCT CAACtttatttatttatttatttatttatttatttatttattttt tgagactaag chr19:35881941-35882441 - 22 2.97e-24 TTGGATTTTA TTTATTTATTTATTTATTTATTTATTTATTTATTTTTTATTTTTA TTTTTATTTT chr10:32207574-32208074 + 55 6.90e-24 TGGGTTttta tttatttatttatttatttatttatttatttatttttattattat a chr1:39720387-39720887 - 30 7.48e-24 AGGTTATTTA CTTACTTACTTATTTATTTATTTATTTATTTATTTATTTATTTAA AGAGACAGGG chr1:62356058-62356558 - 29 1.04e-23 TGCCTTATTT CCTATTTATTTATTTATTTATTTATTTATTTATATATATATTTTT TGAGACAGAG chr1:201223111-201223611 + 34 1.32e-23 gactttggac aaatattatttatttatttatttatttatttatttatttattttg agatggagtc chr12:27021918-27022418 - 30 1.68e-23 AGAGTAAATA TATTTATTTTTATTTATTTATTTATTTATTTATTTATTTATTTGA GACGGAGTCT chr8:117936648-117937148 - 28 7.33e-23 ACTCAACATA GTTATTTATTTATTTATTTGTTTGTTTGTTTATTTATTTATTTTT TGAGATGGAG chr22:41667573-41668073 + 35 2.20e-21 AGCATGACCa tttatttatttatttgtttgtttgtttatttatttatttatGACT ACAAAGATCC chr2:47437200-47437700 - 18 3.24e-21 CTGTCTCTCT GAATTCACTTTATTTATTTATTTATTTATTTATTTATTTATTTGT CAGGAATAAC chr21:32709973-32710473 - 26 4.73e-21 ACTATCTCTC CCTCCTTATTTATTTATTTATTTATGTTTTTATTTATTTATTTTG AGAAGGCATC chr12:48903747-48904247 - 1 5.04e-21 TCTGTCTCCT CAGTGCATTTTATTTATTTATTTATTTATTTATTTATTTATTTAT chr17:75870986-75871486 + 28 1.95e-19 AAAATGTATt ttatttatttatttatattttttatttatttatttatttattttt tgagacagag chr15:74768319-74768819 + 54 8.91e-19 GCCGCCCTCT GGGGGCTTTTCTtttatttatttatttatttatttatttatttat tt chr1:28964378-28964878 - 27 1.72e-18 GCCATTAGAA AATTTTATTTATTTATTTATTTTATTTATTTATTTATTTATTTGA GACAGAGTCT chr5:139517314-139517814 - 24 3.10e-18 GGAAGGAAAT TTATTTATTTATTTTATTTATTTATTTATTTATTTTTTTGAGACG GAGTCTCGCT chr8:118127309-118127809 - 24 1.86e-17 CAGCTAATTT TTATTTATTTATTTATTTATTTTATTTATTTATTTATTTTAGTAG AGTTTATCTC chr14:74111416-74111916 + 9 2.09e-15 tttattta tttatttatttatttatttatttatttTTGTGGGCTGACATCAGA ATTATTTGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:30570495-30570995 2.8e-29 30_[+1]_25 chr12:131454338-13145483 2.8e-29 14_[-1]_41 chr20:2646896-2647396 2.8e-29 24_[+1]_31 chr1:24593620-24594120 2.8e-29 40_[+1]_15 chr1:84891991-84892491 2.8e-29 21_[-1]_34 chr7:69412840-69413340 2.8e-29 31_[+1]_24 chr17:64699479-64699979 2.8e-29 25_[-1]_30 chr2:121266648-121267148 2.8e-29 37_[+1]_18 chr2:65033612-65034112 2.8e-29 39_[+1]_16 chr5:160008634-160009134 5.6e-29 19_[-1]_36 chr1:6404492-6404992 5.6e-29 17_[-1]_38 chr14:102639271-10263977 5.6e-29 34_[+1]_21 chr17:8093649-8094149 5.6e-29 22_[-1]_33 chr6:73461335-73461835 5.6e-29 13_[-1]_42 chr19:48782549-48783049 5.6e-29 34_[+1]_21 chr20:4613025-4613525 5.6e-29 29_[-1]_26 chr17:4407703-4408203 5.6e-29 23_[-1]_32 chr6:134672888-134673388 5.6e-29 13_[-1]_42 chr4:87084303-87084803 5.6e-29 48_[-1]_7 chrX:102494847-102495347 5.6e-29 35_[+1]_20 chr18:48873506-48874006 8.8e-29 32_[+1]_23 chr8:37892197-37892697 8.8e-29 30_[+1]_25 chrX:120664487-120664987 8.8e-29 34_[+1]_21 chr10:21241020-21241520 8.8e-29 23_[-1]_32 chr22:20961244-20961744 8.8e-29 25_[-1]_30 chr4:110210905-110211405 8.8e-29 25_[-1]_30 chr5:160243018-160243518 1.2e-28 24_[-1]_31 chr5:176005687-176006187 1.2e-28 33_[+1]_22 chr7:149406464-149406964 1.2e-28 20_[-1]_35 chr2:223837975-223838475 1.5e-28 51_[+1]_4 chr16:30052468-30052968 2.6e-28 28_[-1]_27 chr3:86969446-86969946 3e-28 33_[+1]_22 chr10:101258431-10125893 3e-28 33_[+1]_22 chrX:123770199-123770699 5.3e-28 29_[-1]_26 chr7:102391039-102391539 6.9e-28 25_[-1]_30 chr20:2172167-2172667 6.9e-28 34_[+1]_21 chr22:42473819-42474319 7.4e-28 32_[+1]_23 chr21:32493540-32494040 9.5e-28 34_[+1]_21 chr19:45653162-45653662 9.5e-28 21_[-1]_34 chr1:984382-984882 9.5e-28 32_[+1]_23 chr19:14556879-14557379 1.4e-27 34_[+1]_21 chrX:135625982-135626482 2.3e-27 54_[+1]_1 chr8:97822296-97822796 3.9e-27 32_[+1]_23 chr1:33458894-33459394 5e-27 31_[+1]_24 chr19:44551793-44552293 5e-27 29_[-1]_26 chr17:35763669-35764169 6.1e-27 26_[-1]_29 chr5:80307739-80308239 1.9e-26 28_[+1]_27 chr17:49368166-49368666 2.9e-26 19_[-1]_36 chr15:66461249-66461749 4e-26 26_[-1]_29 chr16:21820747-21821247 4.5e-26 35_[+1]_20 chr21:32258605-32259105 4.5e-26 33_[+1]_22 chr2:190850574-190851074 5.6e-26 33_[+1]_22 chr3:41158133-41158633 7.6e-26 25_[-1]_30 chr19:48919216-48919716 7.6e-26 35_[+1]_20 chr22:38768458-38768958 2.3e-25 25_[-1]_30 chr22:46530961-46531461 1.2e-24 20_[+1]_35 chr7:135653636-135654136 1.7e-24 25_[+1]_30 chr19:35881941-35882441 3e-24 21_[-1]_34 chr10:32207574-32208074 6.9e-24 54_[+1]_1 chr1:39720387-39720887 7.5e-24 29_[-1]_26 chr1:62356058-62356558 1e-23 28_[-1]_27 chr1:201223111-201223611 1.3e-23 33_[+1]_22 chr12:27021918-27022418 1.7e-23 29_[-1]_26 chr8:117936648-117937148 7.3e-23 27_[-1]_28 chr22:41667573-41668073 2.2e-21 34_[+1]_21 chr2:47437200-47437700 3.2e-21 17_[-1]_38 chr21:32709973-32710473 4.7e-21 25_[-1]_30 chr12:48903747-48904247 5e-21 [-1]_55 chr17:75870986-75871486 1.9e-19 27_[+1]_28 chr15:74768319-74768819 8.9e-19 53_[+1]_2 chr1:28964378-28964878 1.7e-18 26_[-1]_29 chr5:139517314-139517814 3.1e-18 23_[-1]_32 chr8:118127309-118127809 1.9e-17 23_[-1]_32 chr14:74111416-74111916 2.1e-15 8_[+1]_47 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK width=45 seqs=74 chr16:30570495-30570995 ( 31) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr12:131454338-13145483 ( 15) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr20:2646896-2647396 ( 25) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr1:24593620-24594120 ( 41) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr1:84891991-84892491 ( 22) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr7:69412840-69413340 ( 32) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr17:64699479-64699979 ( 26) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr2:121266648-121267148 ( 38) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr2:65033612-65034112 ( 40) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr5:160008634-160009134 ( 20) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr1:6404492-6404992 ( 18) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr14:102639271-10263977 ( 35) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr17:8093649-8094149 ( 23) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr6:73461335-73461835 ( 14) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr19:48782549-48783049 ( 35) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr20:4613025-4613525 ( 30) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr17:4407703-4408203 ( 24) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr6:134672888-134673388 ( 14) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr4:87084303-87084803 ( 49) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chrX:102494847-102495347 ( 36) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr18:48873506-48874006 ( 33) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr8:37892197-37892697 ( 31) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chrX:120664487-120664987 ( 35) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr10:21241020-21241520 ( 24) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr22:20961244-20961744 ( 26) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr4:110210905-110211405 ( 26) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr5:160243018-160243518 ( 25) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTA 1 chr5:176005687-176006187 ( 34) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTA 1 chr7:149406464-149406964 ( 21) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTA 1 chr2:223837975-223838475 ( 52) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAG 1 chr16:30052468-30052968 ( 29) TATATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr3:86969446-86969946 ( 34) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTC 1 chr10:101258431-10125893 ( 34) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTC 1 chrX:123770199-123770699 ( 30) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTCT 1 chr7:102391039-102391539 ( 26) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGG 1 chr20:2172167-2172667 ( 35) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAC 1 chr22:42473819-42474319 ( 33) ATTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr21:32493540-32494040 ( 35) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGA 1 chr19:45653162-45653662 ( 22) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGA 1 chr1:984382-984882 ( 33) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTGA 1 chr19:14556879-14557379 ( 35) CTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chrX:135625982-135626482 ( 55) TTTATCTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr8:97822296-97822796 ( 33) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTAAG 1 chr1:33458894-33459394 ( 32) TATTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr19:44551793-44552293 ( 30) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTCAT 1 chr17:35763669-35764169 ( 27) TGTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr5:80307739-80308239 ( 29) TCTTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr17:49368166-49368666 ( 20) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATCATT 1 chr15:66461249-66461749 ( 27) TTTTATTATTTATTTATTTATTTATTTATTTATTTATTTATTTAG 1 chr16:21820747-21821247 ( 36) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTCTTTT 1 chr21:32258605-32259105 ( 34) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTACTTAC 1 chr2:190850574-190851074 ( 34) TTTATTTATTTATTTATTTATTTATTTATTTATTTATATTTTTTA 1 chr3:41158133-41158633 ( 26) TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATCTCA 1 chr19:48919216-48919716 ( 36) CTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTCTG 1 chr22:38768458-38768958 ( 26) ATTAATTATTTATTTATTTATTTATTTATTTATTTATTTATTTTC 1 chr22:46530961-46531461 ( 21) TCCTTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr7:135653636-135654136 ( 26) CAACTTTATTTATTTATTTATTTATTTATTTATTTATTTATTTTT 1 chr19:35881941-35882441 ( 22) TTTATTTATTTATTTATTTATTTATTTATTTATTTTTTATTTTTA 1 chr10:32207574-32208074 ( 55) TTTATTTATTTATTTATTTATTTATTTATTTATTTTTATTATTAT 1 chr1:39720387-39720887 ( 30) CTTACTTACTTATTTATTTATTTATTTATTTATTTATTTATTTAA 1 chr1:62356058-62356558 ( 29) CCTATTTATTTATTTATTTATTTATTTATTTATATATATATTTTT 1 chr1:201223111-201223611 ( 34) AAATATTATTTATTTATTTATTTATTTATTTATTTATTTATTTTG 1 chr12:27021918-27022418 ( 30) TATTTATTTTTATTTATTTATTTATTTATTTATTTATTTATTTGA 1 chr8:117936648-117937148 ( 28) GTTATTTATTTATTTATTTGTTTGTTTGTTTATTTATTTATTTTT 1 chr22:41667573-41668073 ( 35) TTTATTTATTTATTTGTTTGTTTGTTTATTTATTTATTTATGACT 1 chr2:47437200-47437700 ( 18) GAATTCACTTTATTTATTTATTTATTTATTTATTTATTTATTTGT 1 chr21:32709973-32710473 ( 26) CCTCCTTATTTATTTATTTATTTATGTTTTTATTTATTTATTTTG 1 chr12:48903747-48904247 ( 1) CAGTGCATTTTATTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr17:75870986-75871486 ( 28) TTATTTATTTATTTATATTTTTTATTTATTTATTTATTTATTTTT 1 chr15:74768319-74768819 ( 54) GGGGGCTTTTCTTTTATTTATTTATTTATTTATTTATTTATTTAT 1 chr1:28964378-28964878 ( 27) AATTTTATTTATTTATTTATTTTATTTATTTATTTATTTATTTGA 1 chr5:139517314-139517814 ( 24) TTATTTATTTATTTTATTTATTTATTTATTTATTTTTTTGAGACG 1 chr8:118127309-118127809 ( 24) TTATTTATTTATTTATTTATTTTATTTATTTATTTATTTTAGTAG 1 chr14:74111416-74111916 ( 9) TTTATTTATTTATTTATTTATTTATTTTTGTGGGCTGACATCAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 45 n= 33600 bayes= 8.1583 E= 7.1e-1406 -210 -150 -272 181 -110 -231 -331 181 -152 -431 -331 192 178 -331 -431 -52 -252 -331 -331 196 -410 -231 -1285 201 -152 -1285 -1285 199 194 -431 -1285 -129 -1285 -431 -1285 209 -1285 -1285 -1285 211 -210 -431 -1285 201 201 -1285 -1285 -178 -1285 -1285 -1285 211 -1285 -1285 -1285 211 -252 -1285 -1285 205 203 -1285 -431 -252 -410 -1285 -1285 209 -1285 -1285 -1285 211 -310 -1285 -1285 207 201 -1285 -331 -252 -1285 -1285 -1285 211 -1285 -1285 -1285 211 -1285 -1285 -1285 211 207 -1285 -331 -1285 -1285 -1285 -1285 211 -1285 -1285 -431 209 -1285 -1285 -1285 211 205 -1285 -431 -310 -1285 -1285 -1285 211 -1285 -1285 -431 209 -1285 -1285 -1285 211 209 -1285 -431 -1285 -1285 -1285 -431 209 -410 -1285 -431 207 -1285 -431 -1285 209 203 -1285 -1285 -210 -1285 -1285 -431 209 -210 -1285 -1285 203 -410 -431 -1285 207 199 -1285 -431 -178 -252 -331 -1285 201 -1285 -272 -272 199 -178 -331 -1285 196 48 -231 -131 115 -40 -199 -6 111 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 45 nsites= 74 E= 7.1e-1406 0.054054 0.094595 0.040541 0.810811 0.108108 0.054054 0.027027 0.810811 0.081081 0.013514 0.027027 0.878378 0.797297 0.027027 0.013514 0.162162 0.040541 0.027027 0.027027 0.905405 0.013514 0.054054 0.000000 0.932432 0.081081 0.000000 0.000000 0.918919 0.891892 0.013514 0.000000 0.094595 0.000000 0.013514 0.000000 0.986486 0.000000 0.000000 0.000000 1.000000 0.054054 0.013514 0.000000 0.932432 0.932432 0.000000 0.000000 0.067568 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.040541 0.000000 0.000000 0.959459 0.945946 0.000000 0.013514 0.040541 0.013514 0.000000 0.000000 0.986486 0.000000 0.000000 0.000000 1.000000 0.027027 0.000000 0.000000 0.972973 0.932432 0.000000 0.027027 0.040541 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.972973 0.000000 0.027027 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.013514 0.986486 0.000000 0.000000 0.000000 1.000000 0.959459 0.000000 0.013514 0.027027 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.013514 0.986486 0.000000 0.000000 0.000000 1.000000 0.986486 0.000000 0.013514 0.000000 0.000000 0.000000 0.013514 0.986486 0.013514 0.000000 0.013514 0.972973 0.000000 0.013514 0.000000 0.986486 0.945946 0.000000 0.000000 0.054054 0.000000 0.000000 0.013514 0.986486 0.054054 0.000000 0.000000 0.945946 0.013514 0.013514 0.000000 0.972973 0.918919 0.000000 0.013514 0.067568 0.040541 0.027027 0.000000 0.932432 0.000000 0.040541 0.040541 0.918919 0.067568 0.027027 0.000000 0.905405 0.324324 0.054054 0.108108 0.513514 0.175676 0.067568 0.256757 0.500000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTWK MEME-1 regular expression -------------------------------------------------------------------------------- TTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTT[TA][TG] -------------------------------------------------------------------------------- Time 345.05 secs. ******************************************************************************** ******************************************************************************** MOTIF WGCAATTCCGCTCMY MEME-2 width = 15 sites = 162 llr = 1660 E-value = 3.5e-159 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGCAATTCCGCTCMY MEME-2 Description -------------------------------------------------------------------------------- Simplified A 42:67:::11:::31 pos.-specific C 118211:96:a1a54 probability G 26:12::::8:::12 matrix T 3112:9a12::9:13 bits 2.1 * 1.9 * * 1.7 * * * 1.5 ** * * Relative 1.3 *** *** Entropy 1.1 *** **** (14.8 bits) 0.8 * **** **** 0.6 *********** 0.4 ************ 0.2 *************** 0.0 --------------- Multilevel AGCAATTCCGCTCCC consensus T G T AT sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCGCTCMY MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------- chr1:111747264-111747764 + 53 2.39e-08 CGACAGTGGT TGCAATTCTGCTCCT CTCTCTGCCT chr9:35102935-35103435 + 41 6.19e-08 CCTTTCCTCT TGCAGTTCCGCTCCC CCGGATGTAC chr5:23208909-23209409 + 70 7.16e-08 acagtttctc tgcaattcagctcct tcagcaatgg chr8:127914211-127914711 + 33 1.00e-07 catatgaccc agcaattccactcct aggtgtatat chr1:54577420-54577920 - 57 1.00e-07 CATATGACCC AGCAATTCCACTCCT AGTTATATAC chr17:751097-751597 + 58 1.00e-07 cttagagctc tgccattccgctCCT GAAAAGCTGT chr20:52105095-52105595 + 49 1.19e-07 CGCATGTCCC GGCAATTCTGCTCAT CAGCCGAGCA chr1:145977545-145978045 + 37 1.19e-07 CACCAGGGAT TACAATTCTGCTCCC CAAGAGGCCC chr15:74433854-74434354 - 23 1.71e-07 AGGTTCCCCC AGCAGTTCCGCTCTC GCTCAGGAAA chr19:11925252-11925752 + 71 1.71e-07 GCCCTCTCTG GGCAGTTCCGCTCCC GCAGCCCCGC chr17:75855458-75855958 + 15 2.08e-07 GACGGAAATA AACAGTTCCGCTCCT GGCAGGGGCG chr10:114359304-11435980 + 38 2.08e-07 CACCCTGCAG AGCAGTTCTGCTCAT CAGAATGAGT chr5:80488407-80488907 + 36 2.08e-07 CTCGCGGGAC AGCAGTTCCGCTCTT GAAGGTTACA chr21:32578444-32578944 - 56 2.08e-07 ATCGTCATCT AACAATTCAGCTCCT CCAAAGGTGA chr13:39385526-39386026 + 23 2.08e-07 CTATTAACAT AACAATTCAGCTCCT GCCAAGAAGG chr4:169957708-169958208 - 42 2.08e-07 CACTCCACTC AGCAGTTCTGCTCAT TGTGTCTTCC chr21:45981028-45981528 + 30 2.41e-07 CTGATAAAGC AACAATTCAGCTCAC GGCGAGGTCC chr6:7684864-7685364 - 32 2.41e-07 TATTGGTCCA AGCAATTCAGCTCAG TGTGCTCCCC chrX:54999803-55000303 + 26 2.41e-07 TTGGCAGCTG AGCAGTTCCGCTCAG GGTTCCGTCG chr1:221085655-221086155 - 18 2.41e-07 TATAAAGCAA TCCAATTCTGCTCCC TTGAGCCGAT chr11:46330764-46331264 + 67 2.41e-07 AGAAGTTGAA TGCAATTCCACTCAT CCGACAGGGA chr15:36925666-36926166 + 40 2.89e-07 GTAATAAAAT TGCTATTCTGCTCAC AGATTGCCTG chr3:134363954-134364454 - 69 2.89e-07 CAGAGCCGCG AGCTGTTCCGCTCCC GGCCCGCCCC chr17:76842116-76842616 - 36 3.38e-07 GTGAGATGAA TGCAATTCAGCTCTT AAAAGGTGCC chr22:23248114-23248614 - 73 3.38e-07 CACATGATCC AGCAATTCTACTCCT AGTTATGTAC chr1:116878999-116879499 - 74 3.91e-07 CTCATGTGAA GGCAATTCTGCTCCA GCTGAGACCC chr20:44829502-44830002 + 38 4.51e-07 atacatatca agcaattccactctt tcttataata chr15:70111678-70112178 + 45 4.51e-07 AGCCAGCCCT AGCAATTCCACTCCA TCCCTCCCTa chr16:29877670-29878170 + 30 4.51e-07 ACACTCTCAT ACCAATTCAGCTCAC TGGATTCTCC chr7:10973389-10973889 - 84 5.13e-07 TG TGCAATTCCGCCCAT AAACCCCAAA chr16:31459261-31459761 + 2 5.13e-07 T TCCAGTTCCGCTCCC TGGGATCAGC chr10:96640914-96641414 - 60 5.81e-07 CCTGAGATTG TACAATTCTGCTCCA ATCTCTTCTT chr13:50124220-50124720 - 40 5.81e-07 TGCAGGGGGT GGCACTTCCGCTCCC TCCCCAGCTG chr19:42244596-42245096 + 34 5.81e-07 CAAAGTGCGG AACACTTCCGCTCCC TTCACAAAGC chr1:247372627-247373127 - 31 7.88e-07 CAACTTGCGG AACAATTCAGCTCCA GCTAAATTTG chr14:104077895-10407839 - 53 7.88e-07 AAACAGGAAG AGTAGTTCCGCTCCT CCTGCAGTGT chr17:29176958-29177458 + 10 7.88e-07 CTGCTGGAG AGCTATTCTGCtcaa ccacacactg chr20:62376517-62377017 + 38 7.88e-07 ACCGGGCCAT CTCAATTCCGCTCAC TCTGTGaaag chr6:73580764-73581264 - 40 7.88e-07 TCCTGAAGGA TGCCATTCAGCTCAC TACTTTCTCC chr13:19863590-19864090 + 47 8.95e-07 CCCGCGGCCC TGCAGTTCCACTCCC GCCTGCCAGC chr2:401187-401687 + 69 8.95e-07 AATGGCACTC TGCAATTCTGCCCCC AAACTCAGGG chr6:155151913-155152413 - 68 8.95e-07 CTGGTTGAGC AACAGTTCCGCTCAG GGGTGTAAGT chr16:71288984-71289484 + 21 8.95e-07 GAAGCCATTC TGCACTTCCGCTCTC GGGGCTGCTT chrX:54482227-54482727 - 37 8.95e-07 TGCTCCCAGC TGCAGTTCCACTCCC TTCCCTTCCT chr3:159787249-159787749 - 33 1.04e-06 TTCACTAGGA ATCCATTCCGCTCAC TAAGCTCCTA chr16:52191435-52191935 + 30 1.20e-06 TTCGCTCTTC TACAATTCAGCTCCA TAAGGATGAC chr20:25237860-25238360 - 81 1.20e-06 GACCC AGCAATTCTACTCCA AAGAAAACAC chr17:81018002-81018502 - 52 1.20e-06 GAGCGAGGTA AACAATTCTGCTCTG CCTTCCGGAA chr1:206030548-206031048 + 11 1.20e-06 CAAAACCACC AGCAATTCTACTCCA GGAAAGTGCC chr6:151044703-151045203 + 20 1.20e-06 GTGGACTCAC TGCCATTCTGCTCTT TCTCACGTTT chrX:17121571-17122071 + 41 1.20e-06 cccgggttca agcaatttagctcac tgcaacctcc chr6:36642753-36643253 - 24 1.37e-06 AGAGCAAGAA AACAATTCCCCTCCT AGAGCAGACA chr4:53929877-53930377 - 56 1.37e-06 GACCACCAGG CACAATTCAGCTCAC GTGGCTGTTC chr6:159762291-159762791 - 3 1.37e-06 CAGACCACCT AGCAGTTCCGCCCCT GC chr17:34706005-34706505 - 55 1.55e-06 TTTGTTTTTC TGCCATTCTGCTCAA CCACTTTCCC chr5:43602870-43603370 - 63 1.55e-06 GCCACGTGAC TGCAGCTCCGCTCCC ACCTCGGCCC chr1:228838626-228839126 + 45 1.75e-06 ACAAAGAGGC AACAATTCCCCTCAT TTCCTGTGCG chr6:79984050-79984550 - 58 1.75e-06 TTGGGCTTCG GACAATTCTGCTCAA ATTCCTCCAT chr20:62900253-62900753 + 38 1.75e-06 TGGAGGATGG TGCTACTCCGCTCCT CTCTGCAGAA chr2:20381553-20382053 + 42 1.75e-06 ttctttgtgt tcccattctgctccc tctgggacag chr3:9976916-9977416 + 33 1.98e-06 CTTTAGGATA TGCTGTTCCGCTCAG AGCTGTCAGC chr14:77040207-77040707 + 23 1.98e-06 AAGCAGCCCT GACAGTTCTGCTCCT TCCAAACTTG chr12:10673611-10674111 + 19 2.25e-06 TCACATAAAC ACCCGTTCCGCTCCC AGCCTCTTCC chr8:22188634-22189134 - 62 2.25e-06 GGGCCTGCCA GGCAGTTCTGCTCAG CAGCTGTGCT chr17:76737309-76737809 - 22 2.53e-06 CCAACTGCCC GCTAATTCCGCTCCC CCTCCCTCCA chr1:51956454-51956954 + 40 2.53e-06 taattaccat tccaattcagctcaa atgcttcctc chr15:88878673-88879173 + 79 2.53e-06 GCCCGCGCTT GGCTATTCCACTCAC CCTTGAG chr1:116556488-116556988 + 70 2.83e-06 GACGAAGACC AGCAATTCCACCCAC AGAGGAGATA chr8:12753910-12754410 + 44 2.83e-06 CCCCAGCTTA TGCAATTCTGCCCTC CCGCGGTTCC chr3:39383773-39384273 - 58 2.83e-06 TCCAGGCCCC GGCAATTCCGCCCTT TACCGGGACA chr11:15073449-15073949 + 32 2.83e-06 ACTTCCCATT CCCCATTCCGCTCAC TCGAATAACC chr4:154506199-154506699 + 10 2.83e-06 CTTCCCTGC AGCAATTCTGCCCAA TTCCATTTTA chr2:98346222-98346722 - 28 3.20e-06 GCCTCCTAGG CGCAGTTCCGCTCGC TCCCTCCCCC chr1:92030849-92031349 - 58 3.20e-06 TCAGCTGCGG GGCAATTTAGCTCCT AACAGGAAAT chr7:135200980-135201480 - 14 3.20e-06 TCCCACCAGC AAGAATTCTGCTCCT TTCACACCCA chr8:89689059-89689559 + 29 3.20e-06 CATATTCAAC ATCTATTCAGCTCCT CTCTCTGACA chr1:56571181-56571681 + 64 3.20e-06 ccaaagcccg tgctattcccctcac acctctctcc chr2:69307390-69307890 + 36 3.62e-06 GCGCGGTTTG TGTGATTCCGCTCCC CCGCTCACAC chr6:43510324-43510824 - 34 3.62e-06 CGGGGCGTGC CTCCATTCCGCTCCC CGTCAGCCCT chr5:14168623-14169123 + 67 3.62e-06 AAGGTCTATC TGGCATTCCGCTCCT GGCGGCAGAC chr3:194324218-194324718 + 42 3.62e-06 CATATAAGGC AGCTCTTCCGCTCAG ACTCCTTTTG chr1:15876241-15876741 - 54 4.52e-06 CTGCTGTGCT GGTAATTCCGCTCTG GCCTTCTGCC chr20:5582322-5582822 + 19 4.52e-06 TCAGTACAAA CACAATTCCGCCCAC CCGCTTTCCA chr13:36130209-36130709 + 13 4.52e-06 CAAATCCAGG AGCAATTCCGCGCAA ACCTGGTTTT chr15:84142754-84143254 - 71 5.69e-06 TGAAACTGCA CTCAATTCCGCTCTG ATTTGACGAA chr6:1624367-1624867 + 52 5.69e-06 CGGGAACTCC CACCGTTCCGCTCCC TCTGGGCGCA chr8:23854177-23854677 + 71 6.34e-06 GGGCTCACAG AGTCATTCTGCTCCG CCTCATGGGT chr2:218909168-218909668 + 14 6.34e-06 CCTTCACCCG AGAAATTCAGCTCAG CCCCAGCCTC chr18:21704812-21705312 + 60 7.03e-06 AGTGACCTTG AACGATTCCGCTCTG CGGCGGGTGT chr1:236531605-236532105 - 68 7.03e-06 CCTTTCCGTT TGCAATTTTGCTCTA TATCCTTTCA chr4:84582169-84582669 - 38 7.03e-06 TGCGTCGGCC AACAATTCCGATCAC AACCGCAGCG chr2:111897765-111898265 - 69 7.03e-06 GCTCCTCCAC ATCCATTCCGCTCGC CGCCGAGCGC chr2:222239767-222240267 + 11 7.03e-06 AGAAAAGTAA CGCTATTCCCCTCCC TTCTGACCCA chr3:123066311-123066811 - 18 7.03e-06 CTATATGACC AGCAATTCCACCCTT AGGCTAATAC chr1:115138929-115139429 + 16 7.03e-06 GCCTTGTGAA ACCAGTTACGCTCCC GTTGCTGGCA chrX:129984518-129985018 + 64 7.82e-06 GGGGGTGCCC TTCTATTCCGCTCGC ACCTCCTCCC chr4:147616942-147617442 + 65 7.82e-06 GACCATCTGC GGCAATTCCACCCAC TTCCACGCAC chr11:73120821-73121321 + 27 7.82e-06 tctctttctc agcaatttagctctg tctccaaact chr1:80054080-80054580 + 45 7.82e-06 agtgcagaca aacaactccactcat tatgtacaac chr10:72174055-72174555 - 44 8.70e-06 TAGTATTATT AGCAGTTCTGCCCCA CTCGAGCCCA chr21:33025531-33026031 - 30 9.65e-06 TGTCATCCGG GCTAATTCCGCTCAA TGAAACTCGC chr4:107036053-107036553 - 7 9.65e-06 GCGAGCGTAG CGCAAGTCCGCTCCC TAGGCA chr2:79512372-79512872 + 55 9.65e-06 TCGCGACTCC GGCGATTCAGCTCCG GGTCCCCGCC chr1:53837528-53838028 + 17 9.65e-06 AAGGAGGAAG TACTATTCCACTCAG CTCAGTCCCA chr10:43573501-43574001 + 45 9.65e-06 GCGGGGAAAA AGTTACTCCGCTCCT GCCTCTGACG chr16:66549347-66549847 - 36 1.07e-05 GCTGCCTTAA GCCGATTCTGCTCAC ACTCTGGTGC chr16:27203571-27204071 + 37 1.18e-05 GCTCTGAGAA TGCAATTTAGCTCGT CGCCGGCCTG chr17:67717396-67717896 + 83 1.18e-05 CCCAGTAAGC AGCACTTCCGCGCCT ACC chr5:132293972-132294472 - 64 1.18e-05 GGCTGGGCTC AGCCATTCCGCCCGC GTGCCGGGGA chr11:32892076-32892576 - 34 1.18e-05 CGAGCTCTTT TGCAGTTCCGCTTAC TCCCTCCCCA chr12:123233661-12323416 - 2 1.18e-05 GTGCTCACAG CTCCATTCCGCTCAG T chr19:45927494-45927994 + 84 1.30e-05 gcctctcaac atctattccactctc ct chr1:145858534-145859034 + 7 1.30e-05 AACAGC TGCAATTCCCCTCGG CCCCACCCCT chr11:57527031-57527531 - 61 1.44e-05 CACTGCTGTG GACAATTCCGCACAT TTTATCATTT chr6:90369148-90369648 + 55 1.44e-05 GGGCATTCCC AGCAACTACGCTCAG TGAGACTGAG chr17:62827760-62828260 + 23 1.44e-05 TCCAGCACAT ATACATTCCGCTCCC TCAGTGACTC chr11:123062395-12306289 - 7 1.44e-05 TCAGGCCCCG CGCGATTCCGCCCCC AGTTCT chr7:28686149-28686649 + 16 1.44e-05 ctctttcccc agcccctccgctcct cttcTTGCCC chr16:235486-235986 - 16 1.44e-05 GTATTTGTTG AGTTATTCTGCTCTA ATTGGATGCA chr16:31508117-31508617 - 2 1.44e-05 CTGTGTTCCG AGCAGTTCGGCTCCG G chr3:55702025-55702525 - 79 1.44e-05 AAAAGAA GCCTCTTCCGCTCAC AATTGCTCTG chr6:149864228-149864728 + 49 1.59e-05 GCAGCCTCAG AACAACTTTGCTCCC GCGCCGCTGC chr11:102109805-10211030 - 66 1.93e-05 GGCTGCAGGA AGTTCTTCCGCTCCG CTCGGCCCCT chr3:4320335-4320835 - 51 1.93e-05 TTGTTCACCA TGCAGTTCCTCTCCT TTTCCTCTCA chr7:150378245-150378745 + 22 2.12e-05 ACTGGGCGGA GATGATTCCGCTCAC GGGAACCCTA chr3:17430956-17431456 + 37 2.32e-05 TGTTTTTACT TGCTATTCTGATCCT TGAACTAAGT chr19:35881941-35882441 + 81 2.78e-05 Atccaagtga taccattcacctccc agact chr15:70507954-70508454 - 16 2.78e-05 CTTAGCTCCC TCCACTTCCCCTCAC TTCTCCATGA chr8:38029800-38030300 - 53 2.78e-05 ATGGGGATTG AGTAGTTATGCTCAC CGCCCCCCGC chr16:3950399-3950899 - 47 3.05e-05 AAGTACGCAA GCTCATTCCGCTCTT GCTTTTCTGC chr6:139981802-139982302 + 7 3.05e-05 taaaTC TGCTATTACCCTCCC TTCCGCCCTT chr5:149799045-149799545 - 68 3.05e-05 GAATCAGAGG GTAAATTCAGCTCCT GGAAGCCTGC chr16:77409215-77409715 + 84 3.05e-05 ATAGTATCAC AGACATTCTGCTCGC AG chr1:33342223-33342723 - 10 3.05e-05 TTCAGCTGTT TACAATTCAGCTTAT GTACACTTT chr13:40664066-40664566 + 50 3.63e-05 CAGCCTTTAC AGCAATTCCGCCACC GGTGACAGTG chr7:25950994-25951494 + 47 3.96e-05 CGGCTGCTCT CGCTATTCCGCGCCA AGGGGAGCCG chrX:72238718-72239218 + 80 3.96e-05 agtttggagc ttgAATTTCGCTCAC TCCCGC chr8:61714680-61715180 - 24 4.71e-05 CCACGTGTCC ACCTATTCCGCACCG CGCCCTGTCC chrX:72305771-72306271 + 85 4.71e-05 ACTTCCATCC CGCAATTCCGCTGAA C chr20:23937146-23937646 + 75 4.71e-05 CACCTGCCCT GTAAATTCTGCTCAG TTCATGAGTT chr9:99821670-99822170 + 72 4.71e-05 CAGCTCCTGC TCCTCCTCCGCTCCC catacacaga chr10:74418420-74418920 + 44 5.12e-05 AGGTTAGCTC AGATATTTAGCTCCT TTCCCACCCC chr3:41158133-41158633 - 9 5.12e-05 TTATCTCAGA TGGAGTTTCGCTCTT CCTGCCCA chr14:32076362-32076862 - 28 5.12e-05 CCCTCTTTCT CCGTATTCTGCTCCT CCTCAGTCCC chr5:73216226-73216726 - 57 5.12e-05 CCGGCTGATT CACAGCTCTGCTCTC CCTCGCGTCC chr3:174441126-174441626 - 46 5.12e-05 GGGGACTCGG AGCTGCTACGCTCCT CTCCTAAGAC chr21:43262411-43262911 - 59 5.12e-05 CACCACCACC ACCACTTTCACTCCC ACCACCACCA chr3:138774414-138774914 - 40 5.12e-05 CACACACTTG TACAATTTGGCTCAT GACTCACTCT chr13:24512298-24512798 - 1 5.57e-05 GGGATATTGC GGTCGTTCCGCTCTG chr19:44094218-44094718 + 4 6.57e-05 TGG GGCAGTTCCGCGCGT TGCAGGCCCT chr2:172428116-172428616 - 60 6.57e-05 TAGACCATCC TGGAACTACGCTCCC TGCAAACCCA chr5:5271146-5271646 + 47 7.69e-05 TGTGGctccc gctccttccgctcct cccgctcctc chr19:49017629-49018129 - 64 9.01e-05 AGCGGAGCTC GGGACCTCCGCTCAC TAGGAAGGGT chr18:48873506-48874006 + 81 1.05e-04 tattttgaga cggagtttcgctctt gttgc chr17:4366253-4366753 + 29 1.42e-04 TCGCTGCCGG TGCGAGTCCGCTCGC TTCAGCTCTT chr17:68511809-68512309 - 32 1.76e-04 GCTTCCCTCT CGTCCCTCCGCTCCT CTGTCCACCC chr19:34677738-34678238 - 66 1.76e-04 CTGCTCTCGC GCCCACTTCGCTCTC ACAACAGTGC chrX:103214794-103215294 - 63 1.76e-04 TGTCATCGCC AACGGCTCCGCCCCC GTCCCACGCC chr2:202014681-202015181 - 57 1.88e-04 TTATTGCTCT GCACATTACGCTCAC TTCCAGCAGG chr16:31094700-31095200 - 43 2.02e-04 CCGCTGGGGC CGCGATTCCGCACGT CCCTTACCCG chr4:141133222-141133722 - 10 2.48e-04 CACACGGACC GCTTACTCCGCTCTG CCTGCTCGC chr5:128083241-128083741 - 26 4.43e-04 GGGGAGCAGG CGCGGCTACGCTCCG CCTCAGTGAT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCGCTCMY MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:111747264-111747764 2.4e-08 52_[+2]_33 chr9:35102935-35103435 6.2e-08 40_[+2]_45 chr5:23208909-23209409 7.2e-08 69_[+2]_16 chr8:127914211-127914711 1e-07 32_[+2]_53 chr1:54577420-54577920 1e-07 56_[-2]_29 chr17:751097-751597 1e-07 57_[+2]_28 chr20:52105095-52105595 1.2e-07 48_[+2]_37 chr1:145977545-145978045 1.2e-07 36_[+2]_49 chr15:74433854-74434354 1.7e-07 22_[-2]_63 chr19:11925252-11925752 1.7e-07 70_[+2]_15 chr17:75855458-75855958 2.1e-07 14_[+2]_71 chr10:114359304-11435980 2.1e-07 37_[+2]_48 chr5:80488407-80488907 2.1e-07 35_[+2]_50 chr21:32578444-32578944 2.1e-07 55_[-2]_30 chr13:39385526-39386026 2.1e-07 22_[+2]_63 chr4:169957708-169958208 2.1e-07 41_[-2]_44 chr21:45981028-45981528 2.4e-07 29_[+2]_56 chr6:7684864-7685364 2.4e-07 31_[-2]_54 chrX:54999803-55000303 2.4e-07 25_[+2]_60 chr1:221085655-221086155 2.4e-07 17_[-2]_68 chr11:46330764-46331264 2.4e-07 66_[+2]_19 chr15:36925666-36926166 2.9e-07 39_[+2]_46 chr3:134363954-134364454 2.9e-07 68_[-2]_17 chr17:76842116-76842616 3.4e-07 35_[-2]_50 chr22:23248114-23248614 3.4e-07 72_[-2]_13 chr1:116878999-116879499 3.9e-07 73_[-2]_12 chr20:44829502-44830002 4.5e-07 37_[+2]_48 chr15:70111678-70112178 4.5e-07 44_[+2]_41 chr16:29877670-29878170 4.5e-07 29_[+2]_56 chr7:10973389-10973889 5.1e-07 83_[-2]_2 chr16:31459261-31459761 5.1e-07 1_[+2]_84 chr10:96640914-96641414 5.8e-07 59_[-2]_26 chr13:50124220-50124720 5.8e-07 39_[-2]_46 chr19:42244596-42245096 5.8e-07 33_[+2]_52 chr1:247372627-247373127 7.9e-07 30_[-2]_55 chr14:104077895-10407839 7.9e-07 52_[-2]_33 chr17:29176958-29177458 7.9e-07 9_[+2]_76 chr20:62376517-62377017 7.9e-07 37_[+2]_48 chr6:73580764-73581264 7.9e-07 39_[-2]_46 chr13:19863590-19864090 9e-07 46_[+2]_39 chr2:401187-401687 9e-07 68_[+2]_17 chr6:155151913-155152413 9e-07 67_[-2]_18 chr16:71288984-71289484 9e-07 20_[+2]_65 chrX:54482227-54482727 9e-07 36_[-2]_49 chr3:159787249-159787749 1e-06 32_[-2]_53 chr16:52191435-52191935 1.2e-06 29_[+2]_56 chr20:25237860-25238360 1.2e-06 80_[-2]_5 chr17:81018002-81018502 1.2e-06 51_[-2]_34 chr1:206030548-206031048 1.2e-06 10_[+2]_75 chr6:151044703-151045203 1.2e-06 19_[+2]_66 chrX:17121571-17122071 1.2e-06 40_[+2]_45 chr6:36642753-36643253 1.4e-06 23_[-2]_62 chr4:53929877-53930377 1.4e-06 55_[-2]_30 chr6:159762291-159762791 1.4e-06 2_[-2]_83 chr17:34706005-34706505 1.6e-06 54_[-2]_31 chr5:43602870-43603370 1.6e-06 62_[-2]_23 chr1:228838626-228839126 1.8e-06 44_[+2]_41 chr6:79984050-79984550 1.8e-06 57_[-2]_28 chr20:62900253-62900753 1.8e-06 37_[+2]_48 chr2:20381553-20382053 1.8e-06 41_[+2]_44 chr3:9976916-9977416 2e-06 32_[+2]_53 chr14:77040207-77040707 2e-06 22_[+2]_63 chr12:10673611-10674111 2.2e-06 18_[+2]_67 chr8:22188634-22189134 2.2e-06 61_[-2]_24 chr17:76737309-76737809 2.5e-06 21_[-2]_64 chr1:51956454-51956954 2.5e-06 39_[+2]_46 chr15:88878673-88879173 2.5e-06 78_[+2]_7 chr1:116556488-116556988 2.8e-06 69_[+2]_16 chr8:12753910-12754410 2.8e-06 43_[+2]_42 chr3:39383773-39384273 2.8e-06 57_[-2]_28 chr11:15073449-15073949 2.8e-06 31_[+2]_54 chr4:154506199-154506699 2.8e-06 9_[+2]_76 chr2:98346222-98346722 3.2e-06 27_[-2]_58 chr1:92030849-92031349 3.2e-06 57_[-2]_28 chr7:135200980-135201480 3.2e-06 13_[-2]_72 chr8:89689059-89689559 3.2e-06 28_[+2]_57 chr1:56571181-56571681 3.2e-06 63_[+2]_22 chr2:69307390-69307890 3.6e-06 35_[+2]_50 chr6:43510324-43510824 3.6e-06 33_[-2]_52 chr5:14168623-14169123 3.6e-06 66_[+2]_19 chr3:194324218-194324718 3.6e-06 41_[+2]_44 chr1:15876241-15876741 4.5e-06 53_[-2]_32 chr20:5582322-5582822 4.5e-06 18_[+2]_67 chr13:36130209-36130709 4.5e-06 12_[+2]_73 chr15:84142754-84143254 5.7e-06 70_[-2]_15 chr6:1624367-1624867 5.7e-06 51_[+2]_34 chr8:23854177-23854677 6.3e-06 70_[+2]_15 chr2:218909168-218909668 6.3e-06 13_[+2]_72 chr18:21704812-21705312 7e-06 59_[+2]_26 chr1:236531605-236532105 7e-06 67_[-2]_18 chr4:84582169-84582669 7e-06 37_[-2]_48 chr2:111897765-111898265 7e-06 68_[-2]_17 chr2:222239767-222240267 7e-06 10_[+2]_75 chr3:123066311-123066811 7e-06 17_[-2]_68 chr1:115138929-115139429 7e-06 15_[+2]_70 chrX:129984518-129985018 7.8e-06 63_[+2]_22 chr4:147616942-147617442 7.8e-06 64_[+2]_21 chr11:73120821-73121321 7.8e-06 26_[+2]_59 chr1:80054080-80054580 7.8e-06 44_[+2]_41 chr10:72174055-72174555 8.7e-06 43_[-2]_42 chr21:33025531-33026031 9.7e-06 29_[-2]_56 chr4:107036053-107036553 9.7e-06 6_[-2]_79 chr2:79512372-79512872 9.7e-06 54_[+2]_31 chr1:53837528-53838028 9.7e-06 16_[+2]_69 chr10:43573501-43574001 9.7e-06 44_[+2]_41 chr16:66549347-66549847 1.1e-05 35_[-2]_50 chr16:27203571-27204071 1.2e-05 36_[+2]_49 chr17:67717396-67717896 1.2e-05 82_[+2]_3 chr5:132293972-132294472 1.2e-05 63_[-2]_22 chr11:32892076-32892576 1.2e-05 33_[-2]_52 chr12:123233661-12323416 1.2e-05 1_[-2]_84 chr19:45927494-45927994 1.3e-05 83_[+2]_2 chr1:145858534-145859034 1.3e-05 6_[+2]_79 chr11:57527031-57527531 1.4e-05 60_[-2]_25 chr6:90369148-90369648 1.4e-05 54_[+2]_31 chr17:62827760-62828260 1.4e-05 22_[+2]_63 chr11:123062395-12306289 1.4e-05 6_[-2]_79 chr7:28686149-28686649 1.4e-05 15_[+2]_70 chr16:235486-235986 1.4e-05 15_[-2]_70 chr16:31508117-31508617 1.4e-05 1_[-2]_84 chr3:55702025-55702525 1.4e-05 78_[-2]_7 chr6:149864228-149864728 1.6e-05 48_[+2]_37 chr11:102109805-10211030 1.9e-05 65_[-2]_20 chr3:4320335-4320835 1.9e-05 50_[-2]_35 chr7:150378245-150378745 2.1e-05 21_[+2]_64 chr3:17430956-17431456 2.3e-05 36_[+2]_49 chr19:35881941-35882441 2.8e-05 80_[+2]_5 chr15:70507954-70508454 2.8e-05 15_[-2]_70 chr8:38029800-38030300 2.8e-05 52_[-2]_33 chr16:3950399-3950899 3.1e-05 46_[-2]_39 chr6:139981802-139982302 3.1e-05 6_[+2]_79 chr5:149799045-149799545 3.1e-05 67_[-2]_18 chr16:77409215-77409715 3.1e-05 83_[+2]_2 chr1:33342223-33342723 3.1e-05 9_[-2]_76 chr13:40664066-40664566 3.6e-05 49_[+2]_36 chr7:25950994-25951494 4e-05 46_[+2]_39 chrX:72238718-72239218 4e-05 79_[+2]_6 chr8:61714680-61715180 4.7e-05 23_[-2]_62 chrX:72305771-72306271 4.7e-05 84_[+2]_1 chr20:23937146-23937646 4.7e-05 74_[+2]_11 chr9:99821670-99822170 4.7e-05 71_[+2]_14 chr10:74418420-74418920 5.1e-05 43_[+2]_42 chr3:41158133-41158633 5.1e-05 8_[-2]_77 chr14:32076362-32076862 5.1e-05 27_[-2]_58 chr5:73216226-73216726 5.1e-05 56_[-2]_29 chr3:174441126-174441626 5.1e-05 45_[-2]_40 chr21:43262411-43262911 5.1e-05 58_[-2]_27 chr3:138774414-138774914 5.1e-05 39_[-2]_46 chr13:24512298-24512798 5.6e-05 [-2]_85 chr19:44094218-44094718 6.6e-05 3_[+2]_82 chr2:172428116-172428616 6.6e-05 59_[-2]_26 chr5:5271146-5271646 7.7e-05 46_[+2]_39 chr19:49017629-49018129 9e-05 63_[-2]_22 chr18:48873506-48874006 0.0001 80_[+2]_5 chr17:4366253-4366753 0.00014 28_[+2]_57 chr17:68511809-68512309 0.00018 31_[-2]_54 chr19:34677738-34678238 0.00018 65_[-2]_20 chrX:103214794-103215294 0.00018 62_[-2]_23 chr2:202014681-202015181 0.00019 56_[-2]_29 chr16:31094700-31095200 0.0002 42_[-2]_43 chr4:141133222-141133722 0.00025 9_[-2]_76 chr5:128083241-128083741 0.00044 25_[-2]_60 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCGCTCMY MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGCAATTCCGCTCMY width=15 seqs=162 chr1:111747264-111747764 ( 53) TGCAATTCTGCTCCT 1 chr9:35102935-35103435 ( 41) TGCAGTTCCGCTCCC 1 chr5:23208909-23209409 ( 70) TGCAATTCAGCTCCT 1 chr8:127914211-127914711 ( 33) AGCAATTCCACTCCT 1 chr1:54577420-54577920 ( 57) AGCAATTCCACTCCT 1 chr17:751097-751597 ( 58) TGCCATTCCGCTCCT 1 chr20:52105095-52105595 ( 49) GGCAATTCTGCTCAT 1 chr1:145977545-145978045 ( 37) TACAATTCTGCTCCC 1 chr15:74433854-74434354 ( 23) AGCAGTTCCGCTCTC 1 chr19:11925252-11925752 ( 71) GGCAGTTCCGCTCCC 1 chr17:75855458-75855958 ( 15) AACAGTTCCGCTCCT 1 chr10:114359304-11435980 ( 38) AGCAGTTCTGCTCAT 1 chr5:80488407-80488907 ( 36) AGCAGTTCCGCTCTT 1 chr21:32578444-32578944 ( 56) AACAATTCAGCTCCT 1 chr13:39385526-39386026 ( 23) AACAATTCAGCTCCT 1 chr4:169957708-169958208 ( 42) AGCAGTTCTGCTCAT 1 chr21:45981028-45981528 ( 30) AACAATTCAGCTCAC 1 chr6:7684864-7685364 ( 32) AGCAATTCAGCTCAG 1 chrX:54999803-55000303 ( 26) AGCAGTTCCGCTCAG 1 chr1:221085655-221086155 ( 18) TCCAATTCTGCTCCC 1 chr11:46330764-46331264 ( 67) TGCAATTCCACTCAT 1 chr15:36925666-36926166 ( 40) TGCTATTCTGCTCAC 1 chr3:134363954-134364454 ( 69) AGCTGTTCCGCTCCC 1 chr17:76842116-76842616 ( 36) TGCAATTCAGCTCTT 1 chr22:23248114-23248614 ( 73) AGCAATTCTACTCCT 1 chr1:116878999-116879499 ( 74) GGCAATTCTGCTCCA 1 chr20:44829502-44830002 ( 38) AGCAATTCCACTCTT 1 chr15:70111678-70112178 ( 45) AGCAATTCCACTCCA 1 chr16:29877670-29878170 ( 30) ACCAATTCAGCTCAC 1 chr7:10973389-10973889 ( 84) TGCAATTCCGCCCAT 1 chr16:31459261-31459761 ( 2) TCCAGTTCCGCTCCC 1 chr10:96640914-96641414 ( 60) TACAATTCTGCTCCA 1 chr13:50124220-50124720 ( 40) GGCACTTCCGCTCCC 1 chr19:42244596-42245096 ( 34) AACACTTCCGCTCCC 1 chr1:247372627-247373127 ( 31) AACAATTCAGCTCCA 1 chr14:104077895-10407839 ( 53) AGTAGTTCCGCTCCT 1 chr17:29176958-29177458 ( 10) AGCTATTCTGCTCAA 1 chr20:62376517-62377017 ( 38) CTCAATTCCGCTCAC 1 chr6:73580764-73581264 ( 40) TGCCATTCAGCTCAC 1 chr13:19863590-19864090 ( 47) TGCAGTTCCACTCCC 1 chr2:401187-401687 ( 69) TGCAATTCTGCCCCC 1 chr6:155151913-155152413 ( 68) AACAGTTCCGCTCAG 1 chr16:71288984-71289484 ( 21) TGCACTTCCGCTCTC 1 chrX:54482227-54482727 ( 37) TGCAGTTCCACTCCC 1 chr3:159787249-159787749 ( 33) ATCCATTCCGCTCAC 1 chr16:52191435-52191935 ( 30) TACAATTCAGCTCCA 1 chr20:25237860-25238360 ( 81) AGCAATTCTACTCCA 1 chr17:81018002-81018502 ( 52) AACAATTCTGCTCTG 1 chr1:206030548-206031048 ( 11) AGCAATTCTACTCCA 1 chr6:151044703-151045203 ( 20) TGCCATTCTGCTCTT 1 chrX:17121571-17122071 ( 41) AGCAATTTAGCTCAC 1 chr6:36642753-36643253 ( 24) AACAATTCCCCTCCT 1 chr4:53929877-53930377 ( 56) CACAATTCAGCTCAC 1 chr6:159762291-159762791 ( 3) AGCAGTTCCGCCCCT 1 chr17:34706005-34706505 ( 55) TGCCATTCTGCTCAA 1 chr5:43602870-43603370 ( 63) TGCAGCTCCGCTCCC 1 chr1:228838626-228839126 ( 45) AACAATTCCCCTCAT 1 chr6:79984050-79984550 ( 58) GACAATTCTGCTCAA 1 chr20:62900253-62900753 ( 38) TGCTACTCCGCTCCT 1 chr2:20381553-20382053 ( 42) TCCCATTCTGCTCCC 1 chr3:9976916-9977416 ( 33) TGCTGTTCCGCTCAG 1 chr14:77040207-77040707 ( 23) GACAGTTCTGCTCCT 1 chr12:10673611-10674111 ( 19) ACCCGTTCCGCTCCC 1 chr8:22188634-22189134 ( 62) GGCAGTTCTGCTCAG 1 chr17:76737309-76737809 ( 22) GCTAATTCCGCTCCC 1 chr1:51956454-51956954 ( 40) TCCAATTCAGCTCAA 1 chr15:88878673-88879173 ( 79) GGCTATTCCACTCAC 1 chr1:116556488-116556988 ( 70) AGCAATTCCACCCAC 1 chr8:12753910-12754410 ( 44) TGCAATTCTGCCCTC 1 chr3:39383773-39384273 ( 58) GGCAATTCCGCCCTT 1 chr11:15073449-15073949 ( 32) CCCCATTCCGCTCAC 1 chr4:154506199-154506699 ( 10) AGCAATTCTGCCCAA 1 chr2:98346222-98346722 ( 28) CGCAGTTCCGCTCGC 1 chr1:92030849-92031349 ( 58) GGCAATTTAGCTCCT 1 chr7:135200980-135201480 ( 14) AAGAATTCTGCTCCT 1 chr8:89689059-89689559 ( 29) ATCTATTCAGCTCCT 1 chr1:56571181-56571681 ( 64) TGCTATTCCCCTCAC 1 chr2:69307390-69307890 ( 36) TGTGATTCCGCTCCC 1 chr6:43510324-43510824 ( 34) CTCCATTCCGCTCCC 1 chr5:14168623-14169123 ( 67) TGGCATTCCGCTCCT 1 chr3:194324218-194324718 ( 42) AGCTCTTCCGCTCAG 1 chr1:15876241-15876741 ( 54) GGTAATTCCGCTCTG 1 chr20:5582322-5582822 ( 19) CACAATTCCGCCCAC 1 chr13:36130209-36130709 ( 13) AGCAATTCCGCGCAA 1 chr15:84142754-84143254 ( 71) CTCAATTCCGCTCTG 1 chr6:1624367-1624867 ( 52) CACCGTTCCGCTCCC 1 chr8:23854177-23854677 ( 71) AGTCATTCTGCTCCG 1 chr2:218909168-218909668 ( 14) AGAAATTCAGCTCAG 1 chr18:21704812-21705312 ( 60) AACGATTCCGCTCTG 1 chr1:236531605-236532105 ( 68) TGCAATTTTGCTCTA 1 chr4:84582169-84582669 ( 38) AACAATTCCGATCAC 1 chr2:111897765-111898265 ( 69) ATCCATTCCGCTCGC 1 chr2:222239767-222240267 ( 11) CGCTATTCCCCTCCC 1 chr3:123066311-123066811 ( 18) AGCAATTCCACCCTT 1 chr1:115138929-115139429 ( 16) ACCAGTTACGCTCCC 1 chrX:129984518-129985018 ( 64) TTCTATTCCGCTCGC 1 chr4:147616942-147617442 ( 65) GGCAATTCCACCCAC 1 chr11:73120821-73121321 ( 27) AGCAATTTAGCTCTG 1 chr1:80054080-80054580 ( 45) AACAACTCCACTCAT 1 chr10:72174055-72174555 ( 44) AGCAGTTCTGCCCCA 1 chr21:33025531-33026031 ( 30) GCTAATTCCGCTCAA 1 chr4:107036053-107036553 ( 7) CGCAAGTCCGCTCCC 1 chr2:79512372-79512872 ( 55) GGCGATTCAGCTCCG 1 chr1:53837528-53838028 ( 17) TACTATTCCACTCAG 1 chr10:43573501-43574001 ( 45) AGTTACTCCGCTCCT 1 chr16:66549347-66549847 ( 36) GCCGATTCTGCTCAC 1 chr16:27203571-27204071 ( 37) TGCAATTTAGCTCGT 1 chr17:67717396-67717896 ( 83) AGCACTTCCGCGCCT 1 chr5:132293972-132294472 ( 64) AGCCATTCCGCCCGC 1 chr11:32892076-32892576 ( 34) TGCAGTTCCGCTTAC 1 chr12:123233661-12323416 ( 2) CTCCATTCCGCTCAG 1 chr19:45927494-45927994 ( 84) ATCTATTCCACTCTC 1 chr1:145858534-145859034 ( 7) TGCAATTCCCCTCGG 1 chr11:57527031-57527531 ( 61) GACAATTCCGCACAT 1 chr6:90369148-90369648 ( 55) AGCAACTACGCTCAG 1 chr17:62827760-62828260 ( 23) ATACATTCCGCTCCC 1 chr11:123062395-12306289 ( 7) CGCGATTCCGCCCCC 1 chr7:28686149-28686649 ( 16) AGCCCCTCCGCTCCT 1 chr16:235486-235986 ( 16) AGTTATTCTGCTCTA 1 chr16:31508117-31508617 ( 2) AGCAGTTCGGCTCCG 1 chr3:55702025-55702525 ( 79) GCCTCTTCCGCTCAC 1 chr6:149864228-149864728 ( 49) AACAACTTTGCTCCC 1 chr11:102109805-10211030 ( 66) AGTTCTTCCGCTCCG 1 chr3:4320335-4320835 ( 51) TGCAGTTCCTCTCCT 1 chr7:150378245-150378745 ( 22) GATGATTCCGCTCAC 1 chr3:17430956-17431456 ( 37) TGCTATTCTGATCCT 1 chr19:35881941-35882441 ( 81) TACCATTCACCTCCC 1 chr15:70507954-70508454 ( 16) TCCACTTCCCCTCAC 1 chr8:38029800-38030300 ( 53) AGTAGTTATGCTCAC 1 chr16:3950399-3950899 ( 47) GCTCATTCCGCTCTT 1 chr6:139981802-139982302 ( 7) TGCTATTACCCTCCC 1 chr5:149799045-149799545 ( 68) GTAAATTCAGCTCCT 1 chr16:77409215-77409715 ( 84) AGACATTCTGCTCGC 1 chr1:33342223-33342723 ( 10) TACAATTCAGCTTAT 1 chr13:40664066-40664566 ( 50) AGCAATTCCGCCACC 1 chr7:25950994-25951494 ( 47) CGCTATTCCGCGCCA 1 chrX:72238718-72239218 ( 80) TTGAATTTCGCTCAC 1 chr8:61714680-61715180 ( 24) ACCTATTCCGCACCG 1 chrX:72305771-72306271 ( 85) CGCAATTCCGCTGAA 1 chr20:23937146-23937646 ( 75) GTAAATTCTGCTCAG 1 chr9:99821670-99822170 ( 72) TCCTCCTCCGCTCCC 1 chr10:74418420-74418920 ( 44) AGATATTTAGCTCCT 1 chr3:41158133-41158633 ( 9) TGGAGTTTCGCTCTT 1 chr14:32076362-32076862 ( 28) CCGTATTCTGCTCCT 1 chr5:73216226-73216726 ( 57) CACAGCTCTGCTCTC 1 chr3:174441126-174441626 ( 46) AGCTGCTACGCTCCT 1 chr21:43262411-43262911 ( 59) ACCACTTTCACTCCC 1 chr3:138774414-138774914 ( 40) TACAATTTGGCTCAT 1 chr13:24512298-24512798 ( 1) GGTCGTTCCGCTCTG 1 chr19:44094218-44094718 ( 4) GGCAGTTCCGCGCGT 1 chr2:172428116-172428616 ( 60) TGGAACTACGCTCCC 1 chr5:5271146-5271646 ( 47) GCTCCTTCCGCTCCT 1 chr19:49017629-49018129 ( 64) GGGACCTCCGCTCAC 1 chr18:48873506-48874006 ( 81) CGGAGTTTCGCTCTT 1 chr17:4366253-4366753 ( 29) TGCGAGTCCGCTCGC 1 chr17:68511809-68512309 ( 32) CGTCCCTCCGCTCCT 1 chr19:34677738-34678238 ( 66) GCCCACTTCGCTCTC 1 chrX:103214794-103215294 ( 63) AACGGCTCCGCCCCC 1 chr2:202014681-202015181 ( 57) GCACATTACGCTCAC 1 chr16:31094700-31095200 ( 43) CGCGATTCCGCACGT 1 chr4:141133222-141133722 ( 10) GCTTACTCCGCTCTG 1 chr5:128083241-128083741 ( 26) CGCGGCTACGCTCCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCGCTCMY MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 15 n= 51600 bayes= 8.57663 E= 3.5e-159 81 -112 -58 32 -28 -98 114 -153 -242 159 -244 -123 143 -80 -212 -53 158 -163 -27 -1398 -1398 -135 -444 193 -1398 -1398 -1398 211 -223 170 -1398 -153 -71 122 -444 -6 -106 -244 164 -523 -423 188 -1398 -1398 -365 -153 -344 190 -523 186 -544 -423 50 79 -212 -65 -98 63 -80 44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCGCTCMY MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 15 nsites= 162 E= 3.5e-159 0.407407 0.123457 0.179012 0.290123 0.191358 0.135802 0.592593 0.080247 0.043210 0.808642 0.049383 0.098765 0.623457 0.154321 0.061728 0.160494 0.691358 0.086420 0.222222 0.000000 0.000000 0.104938 0.012346 0.882716 0.000000 0.000000 0.000000 1.000000 0.049383 0.870370 0.000000 0.080247 0.141975 0.623457 0.012346 0.222222 0.111111 0.049383 0.833333 0.006173 0.012346 0.987654 0.000000 0.000000 0.018519 0.092593 0.024691 0.864198 0.006173 0.975309 0.006173 0.012346 0.327160 0.462963 0.061728 0.148148 0.117284 0.413580 0.154321 0.314815 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCGCTCMY MEME-2 regular expression -------------------------------------------------------------------------------- [AT]GCA[AG]TTC[CT]GCTC[CA][CT] -------------------------------------------------------------------------------- Time 666.68 secs. ******************************************************************************** ******************************************************************************** MOTIF AGACRGAGTCTCRCTCTGTYRC MEME-3 width = 22 sites = 27 llr = 556 E-value = 1.3e-086 ******************************************************************************** -------------------------------------------------------------------------------- Motif AGACRGAGTCTCRCTCTGTYRC MEME-3 Description -------------------------------------------------------------------------------- Simplified A a:9:5171::::3::1::::4: pos.-specific C ::18::1::9:7:9:8:::6:9 probability G :a::5919::::6::::9::51 matrix T :::2::::a193:1a:a1a41: bits 2.1 * * 1.9 ** * * * * 1.7 *** * * * * * 1.5 *** * * ** *** * Relative 1.3 *** * **** ** *** * Entropy 1.1 **** * **** ** *** * (29.7 bits) 0.8 ******************* * 0.6 ******************** * 0.4 ********************** 0.2 ********************** 0.0 ---------------------- Multilevel AGACAGAGTCTCGCTCTGTCGC consensus G TA TA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGACRGAGTCTCRCTCTGTYRC MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr16:30052468-30052968 - 6 1.54e-13 TTTATTTTTG AGACGGAGTCTCGCTCTGTCGC CCAGG chr2:190850574-190851074 + 79 4.22e-13 atatttttta agacggagtctcgctctgttgc chr15:66461249-66461749 - 5 7.87e-13 ATTTATTTAG AGACAGAGTCTCACTCTGTCAC TCAG chr16:30570495-30570995 + 77 9.74e-13 tttatttttg agacggagtctcactctgtcac cc chr1:62356058-62356558 - 5 1.09e-12 ATATTTTTTG AGACAGAGTCTTGCTCTGTCAC CCAG chr1:201223111-201223611 + 79 4.79e-12 atttattttg agatggagtctcactctgtcac chr22:23248114-23248614 - 12 5.47e-12 TTTTTTTTTG AGATGGAGTCTCACTCTGTTGC CCGGACACTG chr8:117936648-117937148 - 4 5.47e-12 TTATTTTTTG AGATGGAGTCTCACTCTGTTGC CCA chr22:38768458-38768958 - 1 1.20e-11 TATTTTCTTG AGACAAAGTCTTGCTCTGTCAC chr20:4613025-4613525 - 1 1.52e-11 TATTTTTGTT AGCCGGAGTCTCGCTCTGTCAC chr9:128829868-128830368 + 5 3.45e-11 tttg agacagggtctcgctatgttgc cgaggctgga chr14:102305238-10230573 + 2 3.83e-11 g agacagagtgtcgctctgttac ccaggttggg chr17:64699479-64699979 - 3 6.25e-11 TTTATTTTTG GGACAGAGTCTCACTCTGTCAC CC chr1:33458894-33459394 + 79 6.81e-11 ttatttattg agacagagtctcgctttgtctc chr15:43904185-43904685 + 3 9.02e-11 tg agacagggtctcgctctgtggc ccaggctggc chr7:135653636-135654136 + 73 1.57e-10 ttattttttg agactaagtcttgctctgtcgc ccacgc chr22:20961244-20961744 - 4 1.90e-10 ATTTATTTTG AGACGGACTCTTGCTCTGTCTC CCA chr17:75870986-75871486 + 75 3.27e-10 ttattttttg agacagagtctcgctgttttgc ccag chr16:31117077-31117577 - 69 3.27e-10 ATTTATTTTG AGACGGAATCATGCTCTGTCGC CCAGGCTGGA chr7:102391039-102391539 - 1 5.95e-10 TATTTGGTAG AGCTGGAGTCTTGCTATGTTGC chr17:35763669-35764169 - 5 8.78e-10 ATTTATTTTG AGACAGGGTCTCTCTCTGTAGC TCAG chr10:8703027-8703527 - 6 3.05e-09 TTTTTAGTAG AGACGGGGTTTCACTATGTTGG CCAGG chr5:80307739-80308239 + 77 7.27e-09 tatttTGGag agataacatctcactatgttgc cc chr21:32709973-32710473 - 4 1.26e-08 ATTTATTTTG AGAAGGCATCTTGTTCTGTCAC TCA chr22:42473819-42474319 + 79 2.01e-08 tttatttttg agacagagttgcgtgctgtcac chr5:160243018-160243518 - 3 2.99e-08 ATTTATTTTA AGACATTGTCTGACTCTGTCCC CC chr8:37892197-37892697 + 76 4.35e-08 atttattttg agacggagttttgctcttgttg ccc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGACRGAGTCTCRCTCTGTYRC MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:30052468-30052968 1.5e-13 5_[-3]_73 chr2:190850574-190851074 4.2e-13 78_[+3] chr15:66461249-66461749 7.9e-13 4_[-3]_74 chr16:30570495-30570995 9.7e-13 76_[+3]_2 chr1:62356058-62356558 1.1e-12 4_[-3]_74 chr1:201223111-201223611 4.8e-12 78_[+3] chr22:23248114-23248614 5.5e-12 11_[-3]_67 chr8:117936648-117937148 5.5e-12 3_[-3]_75 chr22:38768458-38768958 1.2e-11 [-3]_78 chr20:4613025-4613525 1.5e-11 [-3]_78 chr9:128829868-128830368 3.5e-11 4_[+3]_74 chr14:102305238-10230573 3.8e-11 1_[+3]_77 chr17:64699479-64699979 6.2e-11 2_[-3]_76 chr1:33458894-33459394 6.8e-11 78_[+3] chr15:43904185-43904685 9e-11 2_[+3]_76 chr7:135653636-135654136 1.6e-10 72_[+3]_6 chr22:20961244-20961744 1.9e-10 3_[-3]_75 chr17:75870986-75871486 3.3e-10 74_[+3]_4 chr16:31117077-31117577 3.3e-10 68_[-3]_10 chr7:102391039-102391539 5.9e-10 [-3]_78 chr17:35763669-35764169 8.8e-10 4_[-3]_74 chr10:8703027-8703527 3.1e-09 5_[-3]_73 chr5:80307739-80308239 7.3e-09 76_[+3]_2 chr21:32709973-32710473 1.3e-08 3_[-3]_75 chr22:42473819-42474319 2e-08 78_[+3] chr5:160243018-160243518 3e-08 2_[-3]_76 chr8:37892197-37892697 4.3e-08 75_[+3]_3 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGACRGAGTCTCRCTCTGTYRC MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AGACRGAGTCTCRCTCTGTYRC width=22 seqs=27 chr16:30052468-30052968 ( 6) AGACGGAGTCTCGCTCTGTCGC 1 chr2:190850574-190851074 ( 79) AGACGGAGTCTCGCTCTGTTGC 1 chr15:66461249-66461749 ( 5) AGACAGAGTCTCACTCTGTCAC 1 chr16:30570495-30570995 ( 77) AGACGGAGTCTCACTCTGTCAC 1 chr1:62356058-62356558 ( 5) AGACAGAGTCTTGCTCTGTCAC 1 chr1:201223111-201223611 ( 79) AGATGGAGTCTCACTCTGTCAC 1 chr22:23248114-23248614 ( 12) AGATGGAGTCTCACTCTGTTGC 1 chr8:117936648-117937148 ( 4) AGATGGAGTCTCACTCTGTTGC 1 chr22:38768458-38768958 ( 1) AGACAAAGTCTTGCTCTGTCAC 1 chr20:4613025-4613525 ( 1) AGCCGGAGTCTCGCTCTGTCAC 1 chr9:128829868-128830368 ( 5) AGACAGGGTCTCGCTATGTTGC 1 chr14:102305238-10230573 ( 2) AGACAGAGTGTCGCTCTGTTAC 1 chr17:64699479-64699979 ( 3) GGACAGAGTCTCACTCTGTCAC 1 chr1:33458894-33459394 ( 79) AGACAGAGTCTCGCTTTGTCTC 1 chr15:43904185-43904685 ( 3) AGACAGGGTCTCGCTCTGTGGC 1 chr7:135653636-135654136 ( 73) AGACTAAGTCTTGCTCTGTCGC 1 chr22:20961244-20961744 ( 4) AGACGGACTCTTGCTCTGTCTC 1 chr17:75870986-75871486 ( 75) AGACAGAGTCTCGCTGTTTTGC 1 chr16:31117077-31117577 ( 69) AGACGGAATCATGCTCTGTCGC 1 chr7:102391039-102391539 ( 1) AGCTGGAGTCTTGCTATGTTGC 1 chr17:35763669-35764169 ( 5) AGACAGGGTCTCTCTCTGTAGC 1 chr10:8703027-8703527 ( 6) AGACGGGGTTTCACTATGTTGG 1 chr5:80307739-80308239 ( 77) AGATAACATCTCACTATGTTGC 1 chr21:32709973-32710473 ( 4) AGAAGGCATCTTGTTCTGTCAC 1 chr22:42473819-42474319 ( 79) AGACAGAGTTGCGTGCTGTCAC 1 chr5:160243018-160243518 ( 3) AGACATTGTCTGACTCTGTCCC 1 chr8:37892197-37892697 ( 76) AGACGGAGTTTTGCTCTTGTTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGACRGAGTCTCRCTCTGTYRC MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 10.5775 E= 1.3e-086 205 -1140 -285 -1140 -1140 -1140 190 -1140 200 -185 -1140 -1140 -264 154 -1140 -32 105 -1140 84 -264 -106 -1140 167 -264 168 -185 -86 -264 -106 -285 167 -1140 -1140 -1140 -1140 211 -1140 167 -285 -106 -264 -1140 -285 200 -1140 131 -285 35 52 -1140 123 -264 -1140 179 -1140 -165 -1140 -1140 -285 205 -65 154 -285 -264 -1140 -1140 -1140 211 -1140 -1140 179 -165 -1140 -1140 -285 205 -264 105 -285 68 68 -285 84 -106 -1140 179 -185 -1140 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGACRGAGTCTCRCTCTGTYRC MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 27 E= 1.3e-086 0.962963 0.000000 0.037037 0.000000 0.000000 0.000000 1.000000 0.000000 0.925926 0.074074 0.000000 0.000000 0.037037 0.777778 0.000000 0.185185 0.481481 0.000000 0.481481 0.037037 0.111111 0.000000 0.851852 0.037037 0.740741 0.074074 0.148148 0.037037 0.111111 0.037037 0.851852 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.851852 0.037037 0.111111 0.037037 0.000000 0.037037 0.925926 0.000000 0.666667 0.037037 0.296296 0.333333 0.000000 0.629630 0.037037 0.000000 0.925926 0.000000 0.074074 0.000000 0.000000 0.037037 0.962963 0.148148 0.777778 0.037037 0.037037 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.925926 0.074074 0.000000 0.000000 0.037037 0.962963 0.037037 0.555556 0.037037 0.370370 0.370370 0.037037 0.481481 0.111111 0.000000 0.925926 0.074074 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AGACRGAGTCTCRCTCTGTYRC MEME-3 regular expression -------------------------------------------------------------------------------- AGAC[AG]GAGTCT[CT][GA]CTCTGT[CT][GA]C -------------------------------------------------------------------------------- Time 941.19 secs. ******************************************************************************** ******************************************************************************** MOTIF WGCAATTCCNGCTCMC MEME-4 width = 16 sites = 67 llr = 787 E-value = 6.2e-062 ******************************************************************************** -------------------------------------------------------------------------------- Motif WGCAATTCCNGCTCMC MEME-4 Description -------------------------------------------------------------------------------- Simplified A 31:77::3:22:::61 pos.-specific C 2:a:1::7931a1a35 probability G 18:11::::36:::12 matrix T 4::2:a9:121:9:12 bits 2.1 * 1.9 * 1.7 * ** * * 1.5 * ** *** Relative 1.3 * ** * *** Entropy 1.1 ** **** *** (16.9 bits) 0.8 ******** *** 0.6 ******** *** 0.4 ******** ***** 0.2 ********* ****** 0.0 ---------------- Multilevel TGCAATTCCGGCTCAC consensus A A C CT sequence A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCNGCTCMC MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr15:43904185-43904685 + 44 7.39e-10 catggagtgg tgcaattccagctcac tgcaacctcc chr7:101118532-101119032 + 22 3.38e-09 agtgcagcaa tgcaattacggctcac tgcagcctca chr9:128192577-128193077 + 71 6.93e-09 tggACTAAGT AGCAATTCCGGCTCCC TTTTCTGTGG chr19:16660212-16660712 + 2 2.02e-08 C AGCAATTCCTACTCAC TTTCTGGGGT chr5:175871379-175871879 - 44 4.79e-08 TGGTTCCTTC TGCTATTCCAGCTCCC GCCGCCGCGT chr19:49746252-49746752 + 48 4.79e-08 GAACAGCTTC TGCAATTCCTGCTCGC TCACGTAGGG chr5:142233607-142234107 + 44 5.57e-08 GCTGCCAGGT TGCAATTACAGCTCCT GAGTGTAAGC chr9:128829868-128830368 + 46 7.41e-08 agtgcagtgg agcaattctagctcac tgcaggcttg chrX:12771673-12772173 + 27 7.41e-08 gtggcagtgg cgcaattacggctcat tgtggcctct chr20:23937146-23937646 + 44 7.41e-08 AAAGCTAAAG GGCAATTCCTGCTCCC ACAGCCACCT chr11:75328917-75329417 + 35 1.14e-07 gacatgcagt aacaattacggctcac agggctcact chr3:63343712-63344212 - 20 1.30e-07 CACTATAAAC TGCAATTACAGCTCAA GCCGTTTCCG chr1:179039038-179039538 - 42 1.51e-07 GTCAAGAACA TACAATTCCGTCTCAC TTGCATCCTG chr17:48816705-48817205 + 66 1.72e-07 CGCTCTTACC CGCAATTCCTACTCCC CCGTCTCGCC chr1:155696928-155697428 - 41 1.72e-07 ATGGTGAAGA AGCAATTCAGGCTCAC CCTGCAGCAT chr6:142885047-142885547 - 26 1.97e-07 TGTGAACAGC AGCAATTCTGGCTCAG TTTGTTTCTT chr19:55117887-55118387 + 60 1.97e-07 cccaggttca agcaattctggctcag tccccagagt chr1:51648403-51648903 + 42 1.97e-07 GATAATTTGA TGCTATTACAGCTCAG ATAAGGTCTG chr6:131807474-131807974 + 15 1.97e-07 GACCACACGC TGCAATTCCAGCCCAG CCCGCGCCGC chr15:72473916-72474416 + 51 2.24e-07 GAACCAGGAA AGCAATTCCCGCTCGG CTCCCCTCGG chr21:37435163-37435663 + 62 2.53e-07 AATGATCTGC AGCAGTTCCCACTCAC TGCGGGCAGG chr1:149899379-149899879 - 57 3.22e-07 CCTCGGCCAC TGCGATTCCCGCTCAG GGCCAGGACT chr12:62191505-62192005 + 26 3.22e-07 GCGGTCTTGC TGCAATTACCGCTCTT ATTCCATCTC chr17:78057900-78058400 - 39 4.09e-07 TAGCAGGTCC TGCAATTCTGGCTCGC ACCAGAGACT chr9:118170031-118170531 + 35 4.09e-07 TCCCCATCCC TGCAATTCCCACCCAT TCTGCTTTTG chr4:5710636-5711136 - 66 5.20e-07 CTGGGATCAA TGCAATTCCAACCCCC TGCCCTTGCC chr2:208040770-208041270 + 35 5.20e-07 caatgccatg agcaattcatgctcat tcctgccaca chr16:179915-180415 - 76 5.20e-07 GTGCAGTGG CGCCATTCCGGCTCAC TGCAACCTCC chr18:33578819-33579319 + 18 5.83e-07 ACCTTTGTGT GGCAATTACCACTCCC TCCCGGCCCC chr3:56977186-56977686 + 66 5.83e-07 CAGGCAAAGA TGCTCTTCCCACTCAC TCGGGAGCCC chr7:121438449-121438949 + 41 8.09e-07 gctgccgcct tgcagttccatctcag tctgctgtgc chr1:115138929-115139429 + 62 8.99e-07 GCAGCACAGA CGCACTTACGGCTCAG GCCAGTCTCC chr6:3612740-3613240 - 47 9.99e-07 TCATAAAATC TGCCATTACTGCTCAT CGCTCTGGCC chr14:68665859-68666359 - 1 9.99e-07 GAAAAATGAC AGCAATTCCAGCTCTA chr1:65002571-65003071 + 29 1.51e-06 CTGCGCCTGC CGCAGTTCCCGCTCGC ACCCCGGCCC chrX:150692743-150693243 - 24 1.67e-06 CGTGCATTTT AGCAATTCCTCCCCAC CCCATTCTTC chr4:110411678-110412178 - 24 1.84e-06 CTCGTAAACT TACAATTACCTCTCCT CAGGAGCTCG chr6:18584947-18585447 + 8 1.84e-06 GTCATGT AGCAATTACGGCTCTa cacacacaca chr19:43626069-43626569 + 50 2.03e-06 ACTGTCAGGC CACAATTCCGGCTCCA TCCACCCACC chr1:149636221-149636721 - 52 2.03e-06 GATCCCCGTC TGCTCTTCCGCCTCAC CCAACGCCCC chr3:23019834-23020334 - 80 2.23e-06 TTATC TGCGCTTCCCACTCAC CCCCTGGATT chr13:26964728-26965228 - 41 2.23e-06 CTCCCCATCT GGCACTTCCTGCTCGC AGACAGGGTC chr19:43667779-43668279 + 33 2.45e-06 TATCAGTACG TTCTATTCCTGCTCCT ATTAGGTCTT chr16:2023426-2023926 - 32 2.95e-06 GGGGTGGGGC CACTATTCCGACTCCC GGTAATGGTC chr7:80387573-80388073 + 25 3.23e-06 CCTGAGGCAA AGCAATTCCCTTTCAC TCCTGACCCT chrX:135477517-135478017 + 62 3.54e-06 attcatgatc tccaattccaactcag tccttggatg chr12:14257911-14258411 - 37 3.87e-06 GGGTGTGAAG TGCTGTTCCCTCTCCT TCAGACCCTC chr10:114359304-11435980 - 68 4.23e-06 ACCTTCCTTT AGCAGTTCTAACTCCC CATGAACTCA chr6:2748214-2748714 - 45 4.23e-06 TAGCGGCAGC AGCAATTACCTCCCCT GCCTTGGCCC chr17:751097-751597 + 20 4.23e-06 ggggctggga agcaattacggctgag gggctccaag chr19:40831731-40832231 + 29 4.23e-06 AGAGCACGTG GACAATTACATCTCAT GCAGGCATTT chr16:85610264-85610764 + 60 5.03e-06 GCTGCAGGAG AGCAATTCCCACCCTT AAACTCGGAG chr6:36642753-36643253 + 43 5.47e-06 ATTGTTTTCT TGCTCTTCCACCTCAG GAGAAAGGAA chr22:36123805-36124305 + 30 5.94e-06 TGCAGACATT TACTCTTCCTGCTCCG GCTTTGTGCC chr6:27235449-27235949 + 38 7.61e-06 agtgcagtgg cgcgatcccggctcac tgcaacctcc chr3:186931768-186932268 - 75 8.25e-06 GCGGCGGCGC CTCCATTCCTGCTCAC ACTGCACGCC chr18:31942925-31943425 - 75 9.68e-06 TCCGTCGTTT TTCACTTCCCTCTCCT CAGCTCTCTT chr1:37794618-37795118 + 39 1.05e-05 CTGGCTTCTT AGCTGTTCCCTCCCAC TCTCATCCTG chr14:103571834-10357233 - 35 1.05e-05 AGTGCAGTGG CGCAATCTCCGCTCAC TGCAAGCTCT chrX:54482227-54482727 - 64 1.05e-05 CCCAGCATCT GGTAATTACTGCTCCC AGTGCTCCCA chr4:53929877-53930377 - 38 1.31e-05 CAGCTCACGT GGCTGTTCTGGCTCAG CAGTTGTTGG chr16:69131711-69132211 + 75 1.42e-05 CTCCCCTTTC TGCTCTTCCCGCTACT TCCTAGGTTC chr14:36767596-36768096 + 10 1.53e-05 TTCTAGCCC AGCAATTCAGGCCCGT TGGTATCTGC chr17:7656955-7657455 + 48 2.19e-05 CTGGCTTTGG GACTATTCCACCTCCT TCCCCTGAGC chr3:17430956-17431456 - 67 2.19e-05 GCATCTTTGT TACAGTTACGGCTACC TGACAACTTA chr1:228861053-228861553 - 59 3.51e-05 GACTTTGCTC TGCACTACTTACTCAC CCAGTGCTTA chr16:31117077-31117577 - 34 5.78e-05 AGTGCAGAGG CGCGATCTCGGCTCAC TGCAACCTCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCNGCTCMC MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr15:43904185-43904685 7.4e-10 43_[+4]_41 chr7:101118532-101119032 3.4e-09 21_[+4]_63 chr9:128192577-128193077 6.9e-09 70_[+4]_14 chr19:16660212-16660712 2e-08 1_[+4]_83 chr5:175871379-175871879 4.8e-08 43_[-4]_41 chr19:49746252-49746752 4.8e-08 47_[+4]_37 chr5:142233607-142234107 5.6e-08 43_[+4]_41 chr9:128829868-128830368 7.4e-08 45_[+4]_39 chrX:12771673-12772173 7.4e-08 26_[+4]_58 chr20:23937146-23937646 7.4e-08 43_[+4]_41 chr11:75328917-75329417 1.1e-07 34_[+4]_50 chr3:63343712-63344212 1.3e-07 19_[-4]_65 chr1:179039038-179039538 1.5e-07 41_[-4]_43 chr17:48816705-48817205 1.7e-07 65_[+4]_19 chr1:155696928-155697428 1.7e-07 40_[-4]_44 chr6:142885047-142885547 2e-07 25_[-4]_59 chr19:55117887-55118387 2e-07 59_[+4]_25 chr1:51648403-51648903 2e-07 41_[+4]_43 chr6:131807474-131807974 2e-07 14_[+4]_70 chr15:72473916-72474416 2.2e-07 50_[+4]_34 chr21:37435163-37435663 2.5e-07 61_[+4]_23 chr1:149899379-149899879 3.2e-07 56_[-4]_28 chr12:62191505-62192005 3.2e-07 25_[+4]_59 chr17:78057900-78058400 4.1e-07 38_[-4]_46 chr9:118170031-118170531 4.1e-07 34_[+4]_50 chr4:5710636-5711136 5.2e-07 65_[-4]_19 chr2:208040770-208041270 5.2e-07 34_[+4]_50 chr16:179915-180415 5.2e-07 75_[-4]_9 chr18:33578819-33579319 5.8e-07 17_[+4]_67 chr3:56977186-56977686 5.8e-07 65_[+4]_19 chr7:121438449-121438949 8.1e-07 40_[+4]_44 chr1:115138929-115139429 9e-07 61_[+4]_23 chr6:3612740-3613240 1e-06 46_[-4]_38 chr14:68665859-68666359 1e-06 [-4]_84 chr1:65002571-65003071 1.5e-06 28_[+4]_56 chrX:150692743-150693243 1.7e-06 23_[-4]_61 chr4:110411678-110412178 1.8e-06 23_[-4]_61 chr6:18584947-18585447 1.8e-06 7_[+4]_77 chr19:43626069-43626569 2e-06 49_[+4]_35 chr1:149636221-149636721 2e-06 51_[-4]_33 chr3:23019834-23020334 2.2e-06 79_[-4]_5 chr13:26964728-26965228 2.2e-06 40_[-4]_44 chr19:43667779-43668279 2.4e-06 32_[+4]_52 chr16:2023426-2023926 2.9e-06 31_[-4]_53 chr7:80387573-80388073 3.2e-06 24_[+4]_60 chrX:135477517-135478017 3.5e-06 61_[+4]_23 chr12:14257911-14258411 3.9e-06 36_[-4]_48 chr10:114359304-11435980 4.2e-06 67_[-4]_17 chr6:2748214-2748714 4.2e-06 44_[-4]_40 chr17:751097-751597 4.2e-06 19_[+4]_65 chr19:40831731-40832231 4.2e-06 28_[+4]_56 chr16:85610264-85610764 5e-06 59_[+4]_25 chr6:36642753-36643253 5.5e-06 42_[+4]_42 chr22:36123805-36124305 5.9e-06 29_[+4]_55 chr6:27235449-27235949 7.6e-06 37_[+4]_47 chr3:186931768-186932268 8.3e-06 74_[-4]_10 chr18:31942925-31943425 9.7e-06 74_[-4]_10 chr1:37794618-37795118 1e-05 38_[+4]_46 chr14:103571834-10357233 1e-05 34_[-4]_50 chrX:54482227-54482727 1e-05 63_[-4]_21 chr4:53929877-53930377 1.3e-05 37_[-4]_47 chr16:69131711-69132211 1.4e-05 74_[+4]_10 chr14:36767596-36768096 1.5e-05 9_[+4]_75 chr17:7656955-7657455 2.2e-05 47_[+4]_37 chr3:17430956-17431456 2.2e-05 66_[-4]_18 chr1:228861053-228861553 3.5e-05 58_[-4]_26 chr16:31117077-31117577 5.8e-05 33_[-4]_51 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCNGCTCMC MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WGCAATTCCNGCTCMC width=16 seqs=67 chr15:43904185-43904685 ( 44) TGCAATTCCAGCTCAC 1 chr7:101118532-101119032 ( 22) TGCAATTACGGCTCAC 1 chr9:128192577-128193077 ( 71) AGCAATTCCGGCTCCC 1 chr19:16660212-16660712 ( 2) AGCAATTCCTACTCAC 1 chr5:175871379-175871879 ( 44) TGCTATTCCAGCTCCC 1 chr19:49746252-49746752 ( 48) TGCAATTCCTGCTCGC 1 chr5:142233607-142234107 ( 44) TGCAATTACAGCTCCT 1 chr9:128829868-128830368 ( 46) AGCAATTCTAGCTCAC 1 chrX:12771673-12772173 ( 27) CGCAATTACGGCTCAT 1 chr20:23937146-23937646 ( 44) GGCAATTCCTGCTCCC 1 chr11:75328917-75329417 ( 35) AACAATTACGGCTCAC 1 chr3:63343712-63344212 ( 20) TGCAATTACAGCTCAA 1 chr1:179039038-179039538 ( 42) TACAATTCCGTCTCAC 1 chr17:48816705-48817205 ( 66) CGCAATTCCTACTCCC 1 chr1:155696928-155697428 ( 41) AGCAATTCAGGCTCAC 1 chr6:142885047-142885547 ( 26) AGCAATTCTGGCTCAG 1 chr19:55117887-55118387 ( 60) AGCAATTCTGGCTCAG 1 chr1:51648403-51648903 ( 42) TGCTATTACAGCTCAG 1 chr6:131807474-131807974 ( 15) TGCAATTCCAGCCCAG 1 chr15:72473916-72474416 ( 51) AGCAATTCCCGCTCGG 1 chr21:37435163-37435663 ( 62) AGCAGTTCCCACTCAC 1 chr1:149899379-149899879 ( 57) TGCGATTCCCGCTCAG 1 chr12:62191505-62192005 ( 26) TGCAATTACCGCTCTT 1 chr17:78057900-78058400 ( 39) TGCAATTCTGGCTCGC 1 chr9:118170031-118170531 ( 35) TGCAATTCCCACCCAT 1 chr4:5710636-5711136 ( 66) TGCAATTCCAACCCCC 1 chr2:208040770-208041270 ( 35) AGCAATTCATGCTCAT 1 chr16:179915-180415 ( 76) CGCCATTCCGGCTCAC 1 chr18:33578819-33579319 ( 18) GGCAATTACCACTCCC 1 chr3:56977186-56977686 ( 66) TGCTCTTCCCACTCAC 1 chr7:121438449-121438949 ( 41) TGCAGTTCCATCTCAG 1 chr1:115138929-115139429 ( 62) CGCACTTACGGCTCAG 1 chr6:3612740-3613240 ( 47) TGCCATTACTGCTCAT 1 chr14:68665859-68666359 ( 1) AGCAATTCCAGCTCTA 1 chr1:65002571-65003071 ( 29) CGCAGTTCCCGCTCGC 1 chrX:150692743-150693243 ( 24) AGCAATTCCTCCCCAC 1 chr4:110411678-110412178 ( 24) TACAATTACCTCTCCT 1 chr6:18584947-18585447 ( 8) AGCAATTACGGCTCTA 1 chr19:43626069-43626569 ( 50) CACAATTCCGGCTCCA 1 chr1:149636221-149636721 ( 52) TGCTCTTCCGCCTCAC 1 chr3:23019834-23020334 ( 80) TGCGCTTCCCACTCAC 1 chr13:26964728-26965228 ( 41) GGCACTTCCTGCTCGC 1 chr19:43667779-43668279 ( 33) TTCTATTCCTGCTCCT 1 chr16:2023426-2023926 ( 32) CACTATTCCGACTCCC 1 chr7:80387573-80388073 ( 25) AGCAATTCCCTTTCAC 1 chrX:135477517-135478017 ( 62) TCCAATTCCAACTCAG 1 chr12:14257911-14258411 ( 37) TGCTGTTCCCTCTCCT 1 chr10:114359304-11435980 ( 68) AGCAGTTCTAACTCCC 1 chr6:2748214-2748714 ( 45) AGCAATTACCTCCCCT 1 chr17:751097-751597 ( 20) AGCAATTACGGCTGAG 1 chr19:40831731-40832231 ( 29) GACAATTACATCTCAT 1 chr16:85610264-85610764 ( 60) AGCAATTCCCACCCTT 1 chr6:36642753-36643253 ( 43) TGCTCTTCCACCTCAG 1 chr22:36123805-36124305 ( 30) TACTCTTCCTGCTCCG 1 chr6:27235449-27235949 ( 38) CGCGATCCCGGCTCAC 1 chr3:186931768-186932268 ( 75) CTCCATTCCTGCTCAC 1 chr18:31942925-31943425 ( 75) TTCACTTCCCTCTCCT 1 chr1:37794618-37795118 ( 39) AGCTGTTCCCTCCCAC 1 chr14:103571834-10357233 ( 35) CGCAATCTCCGCTCAC 1 chrX:54482227-54482727 ( 64) GGTAATTACTGCTCCC 1 chr4:53929877-53930377 ( 38) GGCTGTTCTGGCTCAG 1 chr16:69131711-69132211 ( 75) TGCTCTTCCCGCTACT 1 chr14:36767596-36768096 ( 10) AGCAATTCAGGCCCGT 1 chr17:7656955-7657455 ( 48) GACTATTCCACCTCCT 1 chr3:17430956-17431456 ( 67) TACAGTTACGGCTACC 1 chr1:228861053-228861553 ( 59) TGCACTACTTACTCAC 1 chr16:31117077-31117577 ( 34) CGCGATCTCGGCTCAC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCNGCTCMC MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 10.3517 E= 6.2e-062 36 -71 -136 90 -79 -416 159 -237 -1271 188 -1271 -395 160 -258 -217 -26 166 -84 -117 -1271 -1271 -1271 -1271 211 -395 -258 -1271 202 13 142 -1271 -296 -237 167 -1271 -115 -5 0 23 -26 -26 -217 119 -79 -1271 188 -1271 -395 -1271 -117 -1271 192 -296 183 -416 -1271 125 15 -158 -196 -196 92 -47 4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCNGCTCMC MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 67 E= 6.2e-062 0.298507 0.164179 0.104478 0.432836 0.134328 0.014925 0.805970 0.044776 0.000000 0.985075 0.000000 0.014925 0.701493 0.044776 0.059701 0.194030 0.731343 0.149254 0.119403 0.000000 0.000000 0.000000 0.000000 1.000000 0.014925 0.044776 0.000000 0.940299 0.253731 0.716418 0.000000 0.029851 0.044776 0.850746 0.000000 0.104478 0.223881 0.268657 0.313433 0.194030 0.194030 0.059701 0.611940 0.134328 0.000000 0.985075 0.000000 0.014925 0.000000 0.119403 0.000000 0.880597 0.029851 0.955224 0.014925 0.000000 0.552239 0.298507 0.089552 0.059701 0.059701 0.507463 0.194030 0.238806 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WGCAATTCCNGCTCMC MEME-4 regular expression -------------------------------------------------------------------------------- [TA]GCAATT[CA]C[GCA]GCTC[AC][CT] -------------------------------------------------------------------------------- Time 1215.28 secs. ******************************************************************************** ******************************************************************************** MOTIF WAWAAAWAAAWAAAAAAAHAAA MEME-5 width = 22 sites = 36 llr = 548 E-value = 7.7e-050 ******************************************************************************** -------------------------------------------------------------------------------- Motif WAWAAAWAAAWAAAAAAAHAAA MEME-5 Description -------------------------------------------------------------------------------- Simplified A 674aa85869577777674678 pos.-specific C 1::::1::3:11:::1::223: probability G :11::12:::2:21:1131::1 matrix T 325::1321:3112313:32:1 bits 2.1 * 1.9 ** 1.7 ** * 1.5 ** * Relative 1.3 ** * * * Entropy 1.1 *** * * * ** * ** (22.0 bits) 0.8 ****** *** **** ** *** 0.6 ********** ******* *** 0.4 ********** ******* *** 0.2 ********************** 0.0 ---------------------- Multilevel AATAAAAAAAAAAAAAAAAAAA consensus T A TTC T T TGT C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWAAAWAAAWAAAAAAAHAAA MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr3:16517013-16517513 + 53 2.20e-14 ACTCCCATAC aaaaaaaaaaaaaaaaaaaaaa aaaaaCCACC chr1:35691550-35692050 + 1 3.31e-12 . aataaataaataaataaataaa taCTGCCACA chr22:19952786-19953286 + 1 3.31e-12 . aataaataaataaataaataaa ATGAAGCAGC chr5:109468630-109469130 + 32 1.37e-11 ctacatggcc tataaaaaaaaaaataaGTAAA ATAAACACAG chr10:102766634-10276713 + 1 9.48e-11 . aaaaaaaaaagcaaaaaacaaa TTTCATCTGA chr1:984382-984882 - 3 1.30e-10 AATAAGAAGG AAAAAAGAAAGAAAAGAAAAAA GA chr14:102639271-10263977 - 9 2.76e-10 AATAAATAAA TAAAAATTAAAAAATAAATTAA TTAGCCAG chr6:73461335-73461835 + 59 2.76e-10 aataaataaa taaaaataaaaaataataataa taaaaaaaGC chr13:98033222-98033722 + 1 4.29e-10 . aataaataaataaataaataaG CCTCTCTCTG chr22:42473819-42474319 - 10 7.45e-10 ATAAATAATA AATAAATAAATAAAAATGGTAA CCCTAGTTT chr6:73580764-73581264 - 75 1.27e-09 TGCC AATAAAAACACCAAAAAACAAA ACACTGACAC chr17:19508004-19508504 - 59 1.87e-09 AATCCTCTAC AATTAAGAAAGAAAAAAAAAAA AACCCAACCT chrX:102494847-102495347 - 12 2.70e-09 TAAATAAATA AATAAAAATAAAAGAAAAGAAA TAGAGACAAG chr5:74327096-74327596 + 1 6.19e-09 . CATAAAAACAGAATAATAAAAA CTGTCACAGG chrX:25013744-25014244 - 17 9.69e-09 GAAGGAGAGA AAGAAAGAAAAAGAAAAAGCAA GAAAAGTGGA chr22:23248114-23248614 + 36 1.49e-08 ctccatctca aaaaaaaaaaaaaatcagttat tttgggtaca chr2:121266648-121267148 - 14 3.38e-08 TAAATAAATA ATGAAAAAAATAATTATATTAA AATCATCTGT chr11:71928313-71928813 - 79 4.11e-08 . TGAAAATAAATATTAAAACACA CGGAAATGTA chrX:115912709-115913209 + 48 4.11e-08 atccagtgaa agtaaattcaaaaataggaaaa agcaactgtt chr10:60434193-60434693 + 43 7.26e-08 AATTAGTGAT TTTAACAAAACAAAATAACAAA GTGAAAACAT chr20:34362595-34363095 + 4 7.26e-08 aag aaaaagaaaaAAGAACAACTAA GTTATAAACT chrX:107893910-107894410 - 77 1.14e-07 TA TAAAAAAAAAAAGGATAGGACA CCATACTCGG chr10:8703027-8703527 + 32 2.45e-07 ccgtctctac taaaaatacaaaaattagccag gtgttgtggt chr4:76804075-76804575 + 46 2.66e-07 TGCTTTCCGG TTTAAAAAAATTTAATTATCAA GATCCTGACT chr1:112619919-112620419 - 48 4.27e-07 CACCCTCTCG CAAAATTACAGAAAAAAGTCCA CAGTCACGAT chr10:74418420-74418920 - 9 6.24e-07 CTAACCTCCA ATTAAAGTCAATCATAAAAACA GCCAATTT chr16:30052468-30052968 + 74 6.72e-07 aataaatata aataaaATATAAAAAGTAGCAT TGATG chr3:17430956-17431456 - 15 8.36e-07 CAGAATAGCA AGTAAAAACATCATAGTAAACT CTCTTGCACC chr2:401187-401687 + 22 8.98e-07 ACTGGTGATT AGAAAAATCCATAAAATACACA CAATGGATTT chr15:36925666-36926166 + 18 9.64e-07 GTGAAATTGG TTTAATGACAAAGTAATAAAAT TGCTATTCTG chr10:21241020-21241520 + 71 1.27e-06 taaataaaAA TAAAAATCAATCAAAAGGACCA AGAGCCAG chr17:17467474-17467974 + 48 1.27e-06 TGTGTGAACA ACAAACATAAGAAGAAAGAACA GAAAGCAGCC chr1:81126981-81127481 + 37 1.27e-06 AAAAAAGGAT TAGAAAGTAAATGAAGTGAACA ACCACGAACC chr12:123270123-12327062 - 30 2.03e-06 TGGGACCCAT AAAAACGATACCTAAAAAAAAT CTTGGACACT chr19:45653162-45653662 + 76 3.35e-06 aataaacaaa taaaaaatCAATGATGGGTTCA AAG chr10:32207574-32208074 - 5 4.26e-06 TGCCTAGAGA ATTAAGTACAGATTAAAATACC ACCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWAAAWAAAWAAAAAAAHAAA MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr3:16517013-16517513 2.2e-14 52_[+5]_26 chr1:35691550-35692050 3.3e-12 [+5]_78 chr22:19952786-19953286 3.3e-12 [+5]_78 chr5:109468630-109469130 1.4e-11 31_[+5]_47 chr10:102766634-10276713 9.5e-11 [+5]_78 chr1:984382-984882 1.3e-10 2_[-5]_76 chr14:102639271-10263977 2.8e-10 8_[-5]_70 chr6:73461335-73461835 2.8e-10 58_[+5]_20 chr13:98033222-98033722 4.3e-10 [+5]_78 chr22:42473819-42474319 7.5e-10 9_[-5]_69 chr6:73580764-73581264 1.3e-09 74_[-5]_4 chr17:19508004-19508504 1.9e-09 58_[-5]_20 chrX:102494847-102495347 2.7e-09 11_[-5]_67 chr5:74327096-74327596 6.2e-09 [+5]_78 chrX:25013744-25014244 9.7e-09 16_[-5]_62 chr22:23248114-23248614 1.5e-08 35_[+5]_43 chr2:121266648-121267148 3.4e-08 13_[-5]_65 chr11:71928313-71928813 4.1e-08 78_[-5] chrX:115912709-115913209 4.1e-08 47_[+5]_31 chr10:60434193-60434693 7.3e-08 42_[+5]_36 chr20:34362595-34363095 7.3e-08 3_[+5]_75 chrX:107893910-107894410 1.1e-07 76_[-5]_2 chr10:8703027-8703527 2.4e-07 31_[+5]_47 chr4:76804075-76804575 2.7e-07 45_[+5]_33 chr1:112619919-112620419 4.3e-07 47_[-5]_31 chr10:74418420-74418920 6.2e-07 8_[-5]_70 chr16:30052468-30052968 6.7e-07 73_[+5]_5 chr3:17430956-17431456 8.4e-07 14_[-5]_64 chr2:401187-401687 9e-07 21_[+5]_57 chr15:36925666-36926166 9.6e-07 17_[+5]_61 chr10:21241020-21241520 1.3e-06 70_[+5]_8 chr17:17467474-17467974 1.3e-06 47_[+5]_31 chr1:81126981-81127481 1.3e-06 36_[+5]_42 chr12:123270123-12327062 2e-06 29_[-5]_49 chr19:45653162-45653662 3.4e-06 75_[+5]_3 chr10:32207574-32208074 4.3e-06 4_[-5]_74 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWAAAWAAAWAAAAAAAHAAA MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF WAWAAAWAAAWAAAAAAAHAAA width=22 seqs=36 chr3:16517013-16517513 ( 53) AAAAAAAAAAAAAAAAAAAAAA 1 chr1:35691550-35692050 ( 1) AATAAATAAATAAATAAATAAA 1 chr22:19952786-19953286 ( 1) AATAAATAAATAAATAAATAAA 1 chr5:109468630-109469130 ( 32) TATAAAAAAAAAAATAAGTAAA 1 chr10:102766634-10276713 ( 1) AAAAAAAAAAGCAAAAAACAAA 1 chr1:984382-984882 ( 3) AAAAAAGAAAGAAAAGAAAAAA 1 chr14:102639271-10263977 ( 9) TAAAAATTAAAAAATAAATTAA 1 chr6:73461335-73461835 ( 59) TAAAAATAAAAAATAATAATAA 1 chr13:98033222-98033722 ( 1) AATAAATAAATAAATAAATAAG 1 chr22:42473819-42474319 ( 10) AATAAATAAATAAAAATGGTAA 1 chr6:73580764-73581264 ( 75) AATAAAAACACCAAAAAACAAA 1 chr17:19508004-19508504 ( 59) AATTAAGAAAGAAAAAAAAAAA 1 chrX:102494847-102495347 ( 12) AATAAAAATAAAAGAAAAGAAA 1 chr5:74327096-74327596 ( 1) CATAAAAACAGAATAATAAAAA 1 chrX:25013744-25014244 ( 17) AAGAAAGAAAAAGAAAAAGCAA 1 chr22:23248114-23248614 ( 36) AAAAAAAAAAAAAATCAGTTAT 1 chr2:121266648-121267148 ( 14) ATGAAAAAAATAATTATATTAA 1 chr11:71928313-71928813 ( 79) TGAAAATAAATATTAAAACACA 1 chrX:115912709-115913209 ( 48) AGTAAATTCAAAAATAGGAAAA 1 chr10:60434193-60434693 ( 43) TTTAACAAAACAAAATAACAAA 1 chr20:34362595-34363095 ( 4) AAAAAGAAAAAAGAACAACTAA 1 chrX:107893910-107894410 ( 77) TAAAAAAAAAAAGGATAGGACA 1 chr10:8703027-8703527 ( 32) TAAAAATACAAAAATTAGCCAG 1 chr4:76804075-76804575 ( 46) TTTAAAAAAATTTAATTATCAA 1 chr1:112619919-112620419 ( 48) CAAAATTACAGAAAAAAGTCCA 1 chr10:74418420-74418920 ( 9) ATTAAAGTCAATCATAAAAACA 1 chr16:30052468-30052968 ( 74) AATAAAATATAAAAAGTAGCAT 1 chr3:17430956-17431456 ( 15) AGTAAAAACATCATAGTAAACT 1 chr2:401187-401687 ( 22) AGAAAAATCCATAAAATACACA 1 chr15:36925666-36926166 ( 18) TTTAATGACAAAGTAATAAAAT 1 chr10:21241020-21241520 ( 71) TAAAAATCAATCAAAAGGACCA 1 chr17:17467474-17467974 ( 48) ACAAACATAAGAAGAAAGAACA 1 chr1:81126981-81127481 ( 37) TAGAAAGTAAATGAAGTGAACA 1 chr12:123270123-12327062 ( 30) AAAAACGATACCTAAAAAAAAT 1 chr19:45653162-45653662 ( 76) TAAAAAATCAATGATGGGTTCA 1 chr10:32207574-32208074 ( 5) ATTAAGTACAGATTAAAATACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWAAAWAAAWAAAAAAAHAAA MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 12.3948 E= 7.7e-050 140 -227 -1181 52 158 -327 -127 -48 94 -1181 -168 103 207 -1181 -1181 -306 211 -1181 -1181 -1181 180 -168 -227 -206 103 -1181 -46 52 169 -327 -1181 -6 146 19 -1181 -206 203 -327 -1181 -306 103 -168 -46 11 164 -95 -1181 -74 158 -327 -69 -106 164 -1181 -168 -25 158 -1181 -1181 40 158 -227 -95 -106 146 -1181 -168 26 158 -1181 19 -1181 64 -46 -95 40 146 -69 -1181 -25 158 19 -1181 -1181 175 -327 -227 -74 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWAAAWAAAWAAAAAAAHAAA MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 36 E= 7.7e-050 0.611111 0.055556 0.000000 0.333333 0.694444 0.027778 0.111111 0.166667 0.444444 0.000000 0.083333 0.472222 0.972222 0.000000 0.000000 0.027778 1.000000 0.000000 0.000000 0.000000 0.805556 0.083333 0.055556 0.055556 0.472222 0.000000 0.194444 0.333333 0.750000 0.027778 0.000000 0.222222 0.638889 0.305556 0.000000 0.055556 0.944444 0.027778 0.000000 0.027778 0.472222 0.083333 0.194444 0.250000 0.722222 0.138889 0.000000 0.138889 0.694444 0.027778 0.166667 0.111111 0.722222 0.000000 0.083333 0.194444 0.694444 0.000000 0.000000 0.305556 0.694444 0.055556 0.138889 0.111111 0.638889 0.000000 0.083333 0.277778 0.694444 0.000000 0.305556 0.000000 0.361111 0.194444 0.138889 0.305556 0.638889 0.166667 0.000000 0.194444 0.694444 0.305556 0.000000 0.000000 0.777778 0.027778 0.055556 0.138889 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif WAWAAAWAAAWAAAAAAAHAAA MEME-5 regular expression -------------------------------------------------------------------------------- [AT]A[TA]AAA[AT][AT][AC]A[AT]AAA[AT]A[AT][AG][AT]A[AC]A -------------------------------------------------------------------------------- Time 1482.50 secs. ******************************************************************************** ******************************************************************************** MOTIF TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-6 width = 30 sites = 17 llr = 402 E-value = 1.5e-044 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-6 Description -------------------------------------------------------------------------------- Simplified A 1112:::::1:1:1:1:1:112:1121::1 pos.-specific C :::11:111:11:1211::11::11:121: probability G 29181a18:91818:72828271918:628 matrix T 818:8:819:819181718:719:818162 bits 2.1 1.9 * 1.7 * ** * 1.5 * ** * * * * Relative 1.3 ** * *** * * * ** Entropy 1.1 ******* ******* *** ** ** * (34.1 bits) 0.8 *************** *********** ** 0.6 ****************************** 0.4 ****************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG consensus A CG sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr19:39320108-39320608 - 3 8.02e-19 TGTCCATTTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TG chr19:35947356-35947856 + 43 8.02e-19 GCACTGTTCg tgtgtgtgtgtgtgtgtgtgtgtgtgtgtg tgtgtgtgtg chr21:36289238-36289738 + 2 8.02e-19 g tgtgtgtgtgtgtgtgtgtgtgtgtgtgtg tgtgtgGTTT chrX:48834537-48835037 - 45 8.02e-19 TGTGTGTGTG TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG TGATTTCGTT chr4:141133222-141133722 + 43 1.29e-16 tgtgtgtgtc tgtatgtttgtgtgtgtgtgtgtgtgtgtg tATAATGTGT chr15:40092246-40092746 - 2 3.42e-15 GGCGCACAAG GGTGTGTGTGTGTGTGTGTGTGTGAGTCTG T chr22:35380668-35381168 + 2 4.68e-14 g tgtgtgtgtgtgtgtgtgtgtgtgtTTTCT CTAAAAGTCC chr16:86443551-86444051 - 67 1.84e-12 AGGG TGTGTGCCTGTGTGCGTGTGGGTGTGAGGG TGTGAGTGAG chr6:41591748-41592248 + 40 2.33e-11 ATAGCCAAAA GGGGGgtgtgtgtgtgtgtctgtctgtctg tCTCAAGGTG chr7:131654222-131654722 + 11 7.68e-11 gggtgtgtgt tgtaggggtgtgtattggggtgtgtatgtg tggtgtgtgt chr13:23558616-23559116 + 57 1.00e-09 atgtgtatat gttgtgtttgcatgtctgtggatgtgtggt atgtgtgAGG chr8:21788556-21789056 + 25 2.80e-09 GGAATTCCAG TGACCGTGTGTCTCTGCGTGCGTGTGtctt tctctctcct chr10:74418420-74418920 - 61 2.98e-09 TTCTACAGAT TATGTGCCTGTGTGTGTTTAAAGGGGTGGG AAAGGAGCTA chrX:72305771-72306271 + 1 5.78e-09 . tgtgtgggcgtgtgtCGGGGGAGGGGAGGG CTGAGGTCGA chr1:54577420-54577920 + 2 1.29e-08 a tgaacgtgtatgtgcatgtatttgtacttg ttttagttct chr10:96640914-96641414 + 2 1.52e-08 g tgtgtgtgtgcgtgtgCATGTATACACCCA CGCAAGCAAG chr9:41229849-41230349 + 21 2.11e-08 gtgtgtgtgc agtgtgtgtggtgtctgtggtgtgtgtgtg cacatggtgt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:39320108-39320608 8e-19 2_[-6]_68 chr19:35947356-35947856 8e-19 42_[+6]_28 chr21:36289238-36289738 8e-19 1_[+6]_69 chrX:48834537-48835037 8e-19 44_[-6]_26 chr4:141133222-141133722 1.3e-16 42_[+6]_28 chr15:40092246-40092746 3.4e-15 1_[-6]_69 chr22:35380668-35381168 4.7e-14 1_[+6]_69 chr16:86443551-86444051 1.8e-12 66_[-6]_4 chr6:41591748-41592248 2.3e-11 39_[+6]_31 chr7:131654222-131654722 7.7e-11 10_[+6]_60 chr13:23558616-23559116 1e-09 56_[+6]_14 chr8:21788556-21789056 2.8e-09 24_[+6]_46 chr10:74418420-74418920 3e-09 60_[-6]_10 chrX:72305771-72306271 5.8e-09 [+6]_70 chr1:54577420-54577920 1.3e-08 1_[+6]_69 chr10:96640914-96641414 1.5e-08 1_[+6]_69 chr9:41229849-41230349 2.1e-08 20_[+6]_50 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG width=30 seqs=17 chr19:39320108-39320608 ( 3) TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr19:35947356-35947856 ( 43) TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr21:36289238-36289738 ( 2) TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chrX:48834537-48835037 ( 45) TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG 1 chr4:141133222-141133722 ( 43) TGTATGTTTGTGTGTGTGTGTGTGTGTGTG 1 chr15:40092246-40092746 ( 2) GGTGTGTGTGTGTGTGTGTGTGTGAGTCTG 1 chr22:35380668-35381168 ( 2) TGTGTGTGTGTGTGTGTGTGTGTGTTTTCT 1 chr16:86443551-86444051 ( 67) TGTGTGCCTGTGTGCGTGTGGGTGTGAGGG 1 chr6:41591748-41592248 ( 40) GGGGGGTGTGTGTGTGTGTCTGTCTGTCTG 1 chr7:131654222-131654722 ( 11) TGTAGGGGTGTGTATTGGGGTGTGTATGTG 1 chr13:23558616-23559116 ( 57) GTTGTGTTTGCATGTCTGTGGATGTGTGGT 1 chr8:21788556-21789056 ( 25) TGACCGTGTGTCTCTGCGTGCGTGTGTCTT 1 chr10:74418420-74418920 ( 61) TATGTGCCTGTGTGTGTTTAAAGGGGTGGG 1 chrX:72305771-72306271 ( 1) TGTGTGGGCGTGTGTCGGGGGAGGGGAGGG 1 chr1:54577420-54577920 ( 2) TGAACGTGTATGTGCATGTATTTGTACTTG 1 chr10:96640914-96641414 ( 2) TGTGTGTGTGCGTGTGCATGTATACACCCA 1 chr9:41229849-41230349 ( 21) AGTGTGTGTGGTGTCTGTGGTGTGTGTGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 12.6559 E= 1.5e-044 -198 -1073 -60 172 -198 -1073 172 -198 -98 -1073 -219 183 -39 -219 151 -1073 -1073 -119 -119 172 -1073 -1073 190 -1073 -1073 -119 -119 172 -1073 -119 151 -98 -1073 -219 -1073 202 -198 -1073 181 -1073 -1073 -119 -219 183 -198 -219 162 -198 -1073 -1073 -219 202 -198 -219 162 -198 -1073 -60 -1073 183 -198 -119 140 -98 -1073 -119 -60 161 -198 -1073 162 -98 -1073 -1073 -60 183 -98 -219 162 -1073 -198 -219 -60 161 2 -1073 140 -198 -1073 -1073 -119 193 -198 -219 172 -1073 -198 -219 -119 172 -39 -1073 151 -198 -98 -119 -1073 172 -1073 -19 127 -98 -1073 -119 -19 148 -198 -1073 151 -39 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 17 E= 1.5e-044 0.058824 0.000000 0.176471 0.764706 0.058824 0.000000 0.882353 0.058824 0.117647 0.000000 0.058824 0.823529 0.176471 0.058824 0.764706 0.000000 0.000000 0.117647 0.117647 0.764706 0.000000 0.000000 1.000000 0.000000 0.000000 0.117647 0.117647 0.764706 0.000000 0.117647 0.764706 0.117647 0.000000 0.058824 0.000000 0.941176 0.058824 0.000000 0.941176 0.000000 0.000000 0.117647 0.058824 0.823529 0.058824 0.058824 0.823529 0.058824 0.000000 0.000000 0.058824 0.941176 0.058824 0.058824 0.823529 0.058824 0.000000 0.176471 0.000000 0.823529 0.058824 0.117647 0.705882 0.117647 0.000000 0.117647 0.176471 0.705882 0.058824 0.000000 0.823529 0.117647 0.000000 0.000000 0.176471 0.823529 0.117647 0.058824 0.823529 0.000000 0.058824 0.058824 0.176471 0.705882 0.235294 0.000000 0.705882 0.058824 0.000000 0.000000 0.117647 0.882353 0.058824 0.058824 0.882353 0.000000 0.058824 0.058824 0.117647 0.764706 0.176471 0.000000 0.764706 0.058824 0.117647 0.117647 0.000000 0.764706 0.000000 0.235294 0.647059 0.117647 0.000000 0.117647 0.235294 0.647059 0.058824 0.000000 0.764706 0.176471 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGTGTGTGTGTGTGTGTGTGTGTGTGTGTG MEME-6 regular expression -------------------------------------------------------------------------------- TGTGTGTGTGTGTGTGTGTGT[GA]TGTGT[GC][TG]G -------------------------------------------------------------------------------- Time 1743.13 secs. ******************************************************************************** ******************************************************************************** MOTIF CCCKCCCYCSCYYCCBCCSYYC MEME-7 width = 22 sites = 120 llr = 1154 E-value = 3.1e-040 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCCKCCCYCSCYYCCBCCSYYC MEME-7 Description -------------------------------------------------------------------------------- Simplified A :1:2:11::1:1:1::::11:1 pos.-specific C 76a:867683656583965557 probability G 12:4112125312214123113 matrix T 21:512:31113322312233: bits 2.1 1.9 1.7 * 1.5 * Relative 1.3 * * Entropy 1.1 * * * * * (13.9 bits) 0.8 * * * * * * 0.6 * *** * * * * * * 0.4 ********* *** * ** *** 0.2 ********************** 0.0 ---------------------- Multilevel CCCTCCCCCGCCCCCGCCCCCC consensus T G T CGTTG C GGTTG sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCKCCCYCSCYYCCBCCSYYC MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr21:33642266-33642766 - 3 6.69e-10 CTCCTTCGCT CCCTCCCTCGCTCCCTCGCTCC CG chr3:134363954-134364454 - 45 3.46e-09 CCGCTCCCGG CCCGCCCCCCGCCGCTCCCTCC CGTGCGCGCT chr1:184386811-184387311 + 5 2.57e-08 GCTC ccctccctcgctcgctcctcgc aagctcccgc chr17:48907962-48908462 + 11 3.09e-08 ATATGGCCCT TCCTCCCCCACTCCCTCCTCTC TTCTCCCCTT chr6:75206010-75206510 - 53 5.27e-08 CCTCTACGCT CCCTCCCTTCTCCCCGCCCCCC AGCGGGGCAC chr2:98346222-98346722 - 5 6.26e-08 TCCGCTCGCT CCCTCCCCCGCGCTCCCGGCCC AGGA chr2:79512372-79512872 + 18 7.42e-08 CCTGCCCGCT CCCGCACCCGGTCCCTCTCCCC GGGCCTCGCG chrX:129982192-129982692 + 27 7.42e-08 ctgctttcgt ccctccctctcttgctcgctcc ctcccttcgc chr22:17084613-17085113 - 60 8.78e-08 TGAGACAGGG CCCTCCCCCCGTTCCTCCTTGC GCCCCTCCTC chr7:121438449-121438949 + 16 1.04e-07 tggcaggcgc ccctcccccaccctcgctgccg ccttgcagtt chr10:72354661-72355161 - 61 1.68e-07 CGCAGCCCTT CGCTCGCCCGGCCTCCCCCTCC CTGGTTCCGC chr6:33958678-33959178 + 54 1.68e-07 CAACCATTGT CCCACCCTCTCTGCCCCCCTTC CTCTGTGGAT chr19:45691569-45692069 + 20 1.97e-07 AAACATCTGC CCCTGCCCCCCCCGCTCTGCTC AACCCTTCCC chr21:39313564-39314064 - 71 2.67e-07 TCGGACCA CGCGCCCTCCCCTCCCCCACTC GCTGCTGCGG chr5:140107576-140108076 - 57 3.11e-07 GCGGGATCCG CTCGCCGCCGCCGCCGCCGCCG CAGACGGCAA chr16:1308127-1308627 - 71 3.11e-07 CACTCATT CCCTCCCTCACTCATTCCCTCC CTCACTCATT chr19:43526982-43527482 - 70 3.11e-07 AAGGCGTGC TCCGCCCCCGCCCCGCCCTTCC CGGGGTCAGT chr6:142885047-142885547 + 67 3.61e-07 AATTCCCCCT CCCTTCCCCTCCTTCTCCCTCC CCTTTCTTCT chr3:39152701-39153201 + 46 7.38e-07 tccctccact ccctccctGACCCCCGCCGGCC GGGGGCGCCC chr1:145858534-145859034 + 48 9.72e-07 GCCCCGCAGC CCCGCCCCCGGAGCCCCGCCGC AGCCCCTTCC chr1:204763669-204764169 + 58 9.72e-07 GCCCACGCTC TCCGCTCTCGCCCCTCCCGCTG AGCAGTGGCT chr1:155017330-155017830 + 22 9.72e-07 Agccggagcc gccgccaccgctgccgcccctg actcacgccg chrX:71254959-71255459 + 51 1.11e-06 tctctcttct cgctctctctctctctctcccc ctatctcttt chr10:97542226-97542726 + 7 1.27e-06 GGACCT CCCTCCCTCTGCTCTCCCACTC ATCCCCTTGT chr8:21788556-21789056 + 78 1.45e-06 tctctctctc ctctccctcgctcgctctttgc t chr3:12994415-12994915 + 5 1.45e-06 ACGC CCCACCCCCGCCGCCGtcccca gttcgcagat chr21:42923899-42924399 - 67 1.65e-06 GGCCTGTAAA CCCACCCCGCCACCTTCCGCTC CTATCTATCC chr5:115170155-115170655 - 43 1.65e-06 GTGGCTTAGG CTCGCCCTCGCCCGCACCGTCC TGTGCCGAGC chr6:149864228-149864728 - 18 1.65e-06 TCTGAGGCTG CCCTCCCCGGGGCCTGCTCTCC CAGCCCTGGA chr17:68511809-68512309 - 2 2.42e-06 CTCTGTCCAC CCCACTCTCCCTCCGGCCTCCC T chr12:51025959-51026459 + 78 2.42e-06 CCGACACAGG CCCTCGAGCCGCCCCGCGCCCC T chr6:131807474-131807974 - 77 2.42e-06 TC CCCTCCCCGCGCCCCGGCCACC CTCCCGACAC chr4:139083018-139083518 + 19 2.74e-06 CTAGGGCCAA GACTCCCTCCCTCCCGCCTCGC TCCTTAACAT chr17:48728667-48729167 + 58 2.74e-06 ctctctctct cgctctctcgctctttctctcc tctctctctt chr1:109484011-109484511 + 22 2.74e-06 AGTGCCCGCC CGCTCCGTCACCTTCGCGCCTC CGGGTCCTAG chr12:15221263-15221763 + 54 2.74e-06 AGGGGCAGGC TCCTCCCGCCGCGCTGCCTCCC AGGCTTGCGA chr7:149771732-149772232 + 72 3.09e-06 CCTTTCCCTA CCCTCCCGGTTCTCCCCCGCTC CATCTCC chr9:99821670-99822170 - 10 3.09e-06 CAGGAGACTC CGCTCTCCCGGCTGCGCGTTCG CTCGCTCTC chr1:44820052-44820552 - 67 3.49e-06 CGCAAAGGAC TCCGCACCCGGCGCCGCCCACG GGGTGCGGGT chr19:40348304-40348804 + 66 3.94e-06 CACGTGACCG CCCACCGTCGGCCCGGCGCTCC CCTCCGCCCG chr16:31459261-31459761 - 23 3.94e-06 GGCCTCAGAC TCCGCCCCGCTTCTCGCCGCTG ATCCCAGGGA chr5:1883555-1884055 + 20 4.43e-06 CCGCCGGCCG TGCTCCGCCGGCTTCCCCCTGC CCCTCGCGGC chr1:63317060-63317560 + 35 4.98e-06 CCGCGCGCGC CCCACGGCCCTGCCCGCCCTCC CGCGTCAGCG chr16:77212503-77213003 - 60 4.98e-06 GCCCTAGGCC TCCACCGCGGCTTCCTCTGTCC CCGGGGCCGC chrX:103214794-103215294 - 39 4.98e-06 CCGCCCCCGT CCCACGCCCCCTCCTGCAGCCC GGAGTCAGGC chr17:7932001-7932501 - 37 5.60e-06 CCTGAGATCC CCCTCTCACGCCTCCCCCTACG CTCAAAACCG chr11:123062395-12306289 - 43 5.60e-06 TTCCGTCTTC TCCTGCCCGGCTCCCGCGCCCA AACCCCTCCC chr7:149090399-149090899 + 34 5.60e-06 CCGAGGCGGC TCCGCCATGGTCCCCGCGGTCC CGCCCGGCCC chr1:159881992-159882492 + 33 6.28e-06 CCCTCCAACT CTCTCGCTCCTTTTCCCCCTTC TCCCTTTCTT chr12:14257911-14258411 - 10 6.28e-06 CTCCTTCAGA CCCTCTCGCACATTCCCCCCCC CACCACCAG chr6:35727551-35728051 + 73 6.28e-06 CGTAGAGCTC CCCACACCTGCTCCCTCCCCCA GCTGTG chr16:28863947-28864447 + 70 6.28e-06 GGAGCCTGCA CCCTCCACCTCCCGCCCTTCGG GAAATATCA chr15:40092246-40092746 + 36 7.03e-06 cacacCCTTG TGCGCCCGCCCGCTCTCCCTCC CCAGCATCTC chr9:35905972-35906472 - 60 7.03e-06 GCCCAGCAGC TCCTCACTCCTTTCTCCCCTTC AGCAGCCTCC chr14:105033354-10503385 + 47 7.03e-06 GGTTTCCGCG TTCGCTCCCGGTCGCGCTCTCG GTTTCCGCGT chr12:28190345-28190845 - 65 7.87e-06 CTGCTCCCCT CTCTCGCTCTCCGCTGCCGCCG CTGCGCCGCT chr22:21938223-21938723 - 25 7.87e-06 AGTGGGTGCC CGCGCTCTCCTCCTCGCTCTCG TCCTCTGCCC chr16:31508117-31508617 + 72 8.79e-06 GCTTTTGGAT CCCAGCCCCGCCCCTGCCGCAC GGTGGAC chr17:50139926-50140426 + 70 1.22e-05 CACTTCGCTC TGCTCTCCCGGCCGCTCCCGGC CAATCATAA chr20:38435027-38435527 - 67 1.22e-05 CCTTCGCCGT CCCTCGCCGTCCTTCGCCATCG CACGCCACCG chr19:42176309-42176809 + 45 1.22e-05 CTCTCTCTAC TGCTTCCCCCTCCACGCCTCTC CTTTCCTCAT chr5:134525825-134526325 + 77 1.22e-05 tcttcgctcc ctcgctctctcttgctcgctcg ct chr10:78302860-78303360 - 44 1.22e-05 TTTGCCCAGG GCCTTTCCCGCCGCCGCGCCTG GCCAGCACCA chr21:45981028-45981528 - 71 1.35e-05 CACGGGCA GGCTCACTCGCCTCTTCCCACC AACCGCCTCC chr22:41446504-41447004 + 64 1.35e-05 CAGCCAACAA CCCGCACCTTCCCGCGCCCCGG CCCGAAGTGA chrX:132217208-132217708 - 36 1.35e-05 CCATCCCTTC CCCACCCTCCCCGACTCTACGC TCTTTCCCCT chr8:29350376-29350876 + 60 1.35e-05 CTGGCGCCAG CGCTGCCCTGCCTACGCTCCTC CGGCGCTCAG chr12:10673611-10674111 + 70 1.50e-05 AACTGCAAAG TCCTCCCCCAGCTGCCTCGCTG CCATTCCCT chr6:167826176-167826676 + 21 1.50e-05 CCCAGCACCG CCCGTCCCCGCCCGTCCGGACC GAACGCAGCA chr1:90851311-90851811 - 1 1.67e-05 AGCGTGAGTA TTCTCCGCCCGCTGTCCTCCCC chr6:19836694-19837194 - 38 1.67e-05 CCGGAATTCA CTCTCCACCGCCCCCCTTATCC CGACTAGGCT chr9:20622208-20622708 + 1 1.85e-05 . cgctcgcttgctcgctcgctcg ctTATTAAAC chr1:84299197-84299697 + 69 1.85e-05 TTGTTTGGTT GCCTCTCCccctcacccccaca caccacatac chr5:58460913-58461413 - 34 2.05e-05 GCTGTGTTTG CACTCACTGGCCTACGCTCCTC TCTTCATCCT chr19:45927494-45927994 - 31 2.05e-05 TCCACGTGGT TGCACGCCCTCTCTCTCTGTCC ATCTCTGTTT chr16:1610665-1611165 - 19 2.26e-05 CAGACGCCGG CCCTGCGCCGCCGTCTCTCCTA GAAAAAGCTC chr5:5271146-5271646 + 71 2.26e-05 tcccgctcct cccTCACACGGAGGCTCCTCCC TGCGCGGG chr5:6378234-6378734 + 42 2.26e-05 GTCAAACTTC TCCGCCATCGCCTCGGCCCGTC CCCGACCCAC chr11:102109805-10211030 - 44 2.50e-05 TTCCGCTCCG CTCGGCCCCTTTTCCCCGCCCG TGCTCGGGAA chr10:29735625-29736125 + 17 2.50e-05 GCGCCGCGGC CACGCCCCGCCTCGTTCCCACC GCGCGGGGAG chr10:75401870-75402370 - 21 2.76e-05 CGCAGTCTGT TCCTCACGCGCACCCCCCTTCA AAAGAAGGTT chrX:120468607-120469107 + 66 2.76e-05 TCCCTCGGCG TCCACCCCCCGTTACCGGCCCC TTCTTACTCT chr16:30052684-30053184 - 46 2.76e-05 AAGAGCGAAT CCCGCCGCCGCCCGCCTGGGTC GGATCCTCAT chr7:10973389-10973889 - 52 3.04e-05 AAACCCCAAA GGCTCCGCCCTCTCCGCGCCTA ATTCACCTCC chr19:43667779-43668279 + 73 3.04e-05 ACCGCACCGG CCCTCGGTCGATTACGCCTCTC CAGTTC chr4:5710636-5711136 - 3 3.35e-05 TTCCCGGGAA CACACCGCCCTCCACGCCTCTG AA chr6:109382213-109382713 + 22 3.35e-05 CTCAGTCAAC CCCTCAATCCCCTGCGGCGCCG CCTCCGAGAC chr15:70494726-70495226 + 11 3.35e-05 AAACTTAGGG GCCTCCCCTTCCCGCCCAGTTC CCAAGGAGGC chr19:43640128-43640628 - 55 3.68e-05 CTGCAGCCTC CCCTGTCCCGGTGGCTCAGCTC ACAGCCTCTC chr1:200669631-200670131 - 68 4.05e-05 GATTCTACTC TACGCTCCGCTCCGCTCCGCTC CGCACCACCA chr6:87155319-87155819 - 41 4.45e-05 CTTCACACCC CGCTCCGTCGCGTACGCACCTG GGTCACGTGA chr19:18677972-18678472 - 72 4.45e-05 CTTCCTA CTCACCCCCATTCACCCCGCGG CCCGCCTGGC chr1:30782679-30783179 + 44 4.45e-05 CTCCAGCATC TCCGCCATCCCCTGTTCTCCCA AGATGCTGAG chr5:50963114-50963614 - 64 4.45e-05 CATAAACCAT CCCACCCAGCCGCCGGCCCCCC GACTTTCTCC chr5:43602870-43603370 - 39 4.88e-05 CCGCTCCCAC CTCGGCCCGCGCCCCTTCCCCG CCCCAGCTTT chr13:113296791-11329729 + 25 4.88e-05 AGGACCTCGG CTCGGCCCCAGTCCCCCGGACC AGGCCGGGTC chr5:73216226-73216726 + 3 4.88e-05 CT GCCGCCCCCGGAGACTCGGATC GAGCGCTGGA chr19:11925252-11925752 - 27 5.85e-05 CGGGGCAGGG GCCGCGGCCGCAGTCGCCGCGC AGGGACGGGA chr5:123423258-123423758 - 72 5.85e-05 ACACCAA GTCGCCCGCCTCTCCTCGTCCG GCTAGCAGAG chr19:39445656-39446156 - 79 5.85e-05 . CTCGCCGTCACTGCTGCGCTCG CTGTCCTCCT chr14:103571834-10357233 - 3 5.85e-05 TGCAAGCTCT GCCTCCCGGGTTCACGCCATTC TC chr19:15125471-15125971 - 47 6.40e-05 AAGTGGGCCA CCCGGGCACGGCCACGCTCCCG GGTCACGTGA chr12:50025075-50025575 + 10 6.99e-05 AGCCTGTCC CGCTGTCCCGCTGTCCCGGACC CCCGCGGCGG chr1:92832134-92832634 - 5 7.63e-05 CTAAACTCAC CCTTCTCCCCAATCCGCCGTCC AAGC chr4:107036053-107036553 + 27 8.32e-05 TTGCGCTACG CTCGCCGCGGGctcccgctttc tctctctctg chr5:179023459-179023959 + 11 8.32e-05 GACCGCGTTC TCCGCTCTCGGCGCTGTGGTTC TCTCTCGGAC chr18:31942925-31943425 + 7 9.07e-05 CTCCCA GCTGCCCCCGCGCGCGTCCCTC ACGTGACTGT chr1:44775880-44776380 - 56 9.07e-05 GGCGGACAGG CCCACGCTCGCACCCACCTTGG TGTTGGCAGC chr14:49586370-49586870 - 6 9.87e-05 ACTACAGGCA CGCGCCACCGCGCCCGGCGGTC GGATA chr11:83071934-83072434 - 39 1.07e-04 GACCAGATCG TCCTCCACCTCACCGTCCCCAC TGAACCACCA chr11:67391590-67392090 + 33 1.37e-04 CTGGCTGGCG GGCGCCGCGGGCCTCCCCGGTC ACGTGACACC chr10:116273304-11627380 + 66 1.49e-04 TGCGGTGGGA CCCGCGGCCGGACCCGTACTCG CGCACAGGAC chr16:85610264-85610764 - 37 1.61e-04 GGAATTGCTC TCCTGCAGCCGGCGCGCTCCTC GCTAACGAGG chr1:44842881-44843381 - 40 1.75e-04 GCGGGTGAAT CCCGGCGCCGCGCCCCGGACCC GCAGCTCCCT chr17:29292263-29292763 - 5 1.89e-04 TCCTGCCAGG TTCGCTCACGACTCCGCCTCTG AGGC chr16:56932025-56932525 + 2 1.89e-04 C GACACCGCCGCCGCCGCCATGG AGTCCGAGAC chr1:108199724-108200224 + 2 2.20e-04 A CGCTCAGGCGGCGCCCCGGCGG CGACCCACCT chr8:95024704-95025204 - 70 2.37e-04 CCGGCACTG CGTGCCCTTCGACCCCCCGCCG TCGGCGCGCA chr7:25950994-25951494 - 19 2.56e-04 AGCGAGAGCA GCCGTGACCTCCGACCCCGCCC GCCGGCAGCC chr16:88856884-88857384 - 21 2.56e-04 CGCCAGGCAC CGCGTCACGTGACCCGCCGCTG GTCACGCGGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCKCCCYCSCYYCCBCCSYYC MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr21:33642266-33642766 6.7e-10 2_[-7]_76 chr3:134363954-134364454 3.5e-09 44_[-7]_34 chr1:184386811-184387311 2.6e-08 4_[+7]_74 chr17:48907962-48908462 3.1e-08 10_[+7]_68 chr6:75206010-75206510 5.3e-08 52_[-7]_26 chr2:98346222-98346722 6.3e-08 4_[-7]_74 chr2:79512372-79512872 7.4e-08 17_[+7]_61 chrX:129982192-129982692 7.4e-08 26_[+7]_52 chr22:17084613-17085113 8.8e-08 59_[-7]_19 chr7:121438449-121438949 1e-07 15_[+7]_63 chr10:72354661-72355161 1.7e-07 60_[-7]_18 chr6:33958678-33959178 1.7e-07 53_[+7]_25 chr19:45691569-45692069 2e-07 19_[+7]_59 chr21:39313564-39314064 2.7e-07 70_[-7]_8 chr5:140107576-140108076 3.1e-07 56_[-7]_22 chr16:1308127-1308627 3.1e-07 70_[-7]_8 chr19:43526982-43527482 3.1e-07 69_[-7]_9 chr6:142885047-142885547 3.6e-07 66_[+7]_12 chr3:39152701-39153201 7.4e-07 45_[+7]_33 chr1:145858534-145859034 9.7e-07 47_[+7]_31 chr1:204763669-204764169 9.7e-07 57_[+7]_21 chr1:155017330-155017830 9.7e-07 21_[+7]_57 chrX:71254959-71255459 1.1e-06 50_[+7]_28 chr10:97542226-97542726 1.3e-06 6_[+7]_72 chr8:21788556-21789056 1.4e-06 77_[+7]_1 chr3:12994415-12994915 1.4e-06 4_[+7]_74 chr21:42923899-42924399 1.7e-06 66_[-7]_12 chr5:115170155-115170655 1.7e-06 42_[-7]_36 chr6:149864228-149864728 1.7e-06 17_[-7]_61 chr17:68511809-68512309 2.4e-06 1_[-7]_77 chr12:51025959-51026459 2.4e-06 77_[+7]_1 chr6:131807474-131807974 2.4e-06 76_[-7]_2 chr4:139083018-139083518 2.7e-06 18_[+7]_60 chr17:48728667-48729167 2.7e-06 57_[+7]_21 chr1:109484011-109484511 2.7e-06 21_[+7]_57 chr12:15221263-15221763 2.7e-06 53_[+7]_25 chr7:149771732-149772232 3.1e-06 71_[+7]_7 chr9:99821670-99822170 3.1e-06 9_[-7]_69 chr1:44820052-44820552 3.5e-06 66_[-7]_12 chr19:40348304-40348804 3.9e-06 65_[+7]_13 chr16:31459261-31459761 3.9e-06 22_[-7]_56 chr5:1883555-1884055 4.4e-06 19_[+7]_59 chr1:63317060-63317560 5e-06 34_[+7]_44 chr16:77212503-77213003 5e-06 59_[-7]_19 chrX:103214794-103215294 5e-06 38_[-7]_40 chr17:7932001-7932501 5.6e-06 36_[-7]_42 chr11:123062395-12306289 5.6e-06 42_[-7]_36 chr7:149090399-149090899 5.6e-06 33_[+7]_45 chr1:159881992-159882492 6.3e-06 32_[+7]_46 chr12:14257911-14258411 6.3e-06 9_[-7]_69 chr6:35727551-35728051 6.3e-06 72_[+7]_6 chr16:28863947-28864447 6.3e-06 69_[+7]_9 chr15:40092246-40092746 7e-06 35_[+7]_43 chr9:35905972-35906472 7e-06 59_[-7]_19 chr14:105033354-10503385 7e-06 46_[+7]_32 chr12:28190345-28190845 7.9e-06 64_[-7]_14 chr22:21938223-21938723 7.9e-06 24_[-7]_54 chr16:31508117-31508617 8.8e-06 71_[+7]_7 chr17:50139926-50140426 1.2e-05 69_[+7]_9 chr20:38435027-38435527 1.2e-05 66_[-7]_12 chr19:42176309-42176809 1.2e-05 44_[+7]_34 chr5:134525825-134526325 1.2e-05 76_[+7]_2 chr10:78302860-78303360 1.2e-05 43_[-7]_35 chr21:45981028-45981528 1.4e-05 70_[-7]_8 chr22:41446504-41447004 1.4e-05 63_[+7]_15 chrX:132217208-132217708 1.4e-05 35_[-7]_43 chr8:29350376-29350876 1.4e-05 59_[+7]_19 chr12:10673611-10674111 1.5e-05 69_[+7]_9 chr6:167826176-167826676 1.5e-05 20_[+7]_58 chr1:90851311-90851811 1.7e-05 [-7]_78 chr6:19836694-19837194 1.7e-05 37_[-7]_41 chr9:20622208-20622708 1.8e-05 [+7]_78 chr1:84299197-84299697 1.8e-05 68_[+7]_10 chr5:58460913-58461413 2e-05 33_[-7]_45 chr19:45927494-45927994 2e-05 30_[-7]_48 chr16:1610665-1611165 2.3e-05 18_[-7]_60 chr5:5271146-5271646 2.3e-05 70_[+7]_8 chr5:6378234-6378734 2.3e-05 41_[+7]_37 chr11:102109805-10211030 2.5e-05 43_[-7]_35 chr10:29735625-29736125 2.5e-05 16_[+7]_62 chr10:75401870-75402370 2.8e-05 20_[-7]_58 chrX:120468607-120469107 2.8e-05 65_[+7]_13 chr16:30052684-30053184 2.8e-05 45_[-7]_33 chr7:10973389-10973889 3e-05 51_[-7]_27 chr19:43667779-43668279 3e-05 72_[+7]_6 chr4:5710636-5711136 3.3e-05 2_[-7]_76 chr6:109382213-109382713 3.3e-05 21_[+7]_57 chr15:70494726-70495226 3.3e-05 10_[+7]_68 chr19:43640128-43640628 3.7e-05 54_[-7]_24 chr1:200669631-200670131 4e-05 67_[-7]_11 chr6:87155319-87155819 4.4e-05 40_[-7]_38 chr19:18677972-18678472 4.4e-05 71_[-7]_7 chr1:30782679-30783179 4.4e-05 43_[+7]_35 chr5:50963114-50963614 4.4e-05 63_[-7]_15 chr5:43602870-43603370 4.9e-05 38_[-7]_40 chr13:113296791-11329729 4.9e-05 24_[+7]_54 chr5:73216226-73216726 4.9e-05 2_[+7]_76 chr19:11925252-11925752 5.8e-05 26_[-7]_52 chr5:123423258-123423758 5.8e-05 71_[-7]_7 chr19:39445656-39446156 5.8e-05 78_[-7] chr14:103571834-10357233 5.8e-05 2_[-7]_76 chr19:15125471-15125971 6.4e-05 46_[-7]_32 chr12:50025075-50025575 7e-05 9_[+7]_69 chr1:92832134-92832634 7.6e-05 4_[-7]_74 chr4:107036053-107036553 8.3e-05 26_[+7]_52 chr5:179023459-179023959 8.3e-05 10_[+7]_68 chr18:31942925-31943425 9.1e-05 6_[+7]_72 chr1:44775880-44776380 9.1e-05 55_[-7]_23 chr14:49586370-49586870 9.9e-05 5_[-7]_73 chr11:83071934-83072434 0.00011 38_[-7]_40 chr11:67391590-67392090 0.00014 32_[+7]_46 chr10:116273304-11627380 0.00015 65_[+7]_13 chr16:85610264-85610764 0.00016 36_[-7]_42 chr1:44842881-44843381 0.00017 39_[-7]_39 chr17:29292263-29292763 0.00019 4_[-7]_74 chr16:56932025-56932525 0.00019 1_[+7]_77 chr1:108199724-108200224 0.00022 1_[+7]_77 chr8:95024704-95025204 0.00024 69_[-7]_9 chr7:25950994-25951494 0.00026 18_[-7]_60 chr16:88856884-88857384 0.00026 20_[-7]_58 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCKCCCYCSCYYCCBCCSYYC MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCCKCCCYCSCYYCCBCCSYYC width=22 seqs=120 chr21:33642266-33642766 ( 3) CCCTCCCTCGCTCCCTCGCTCC 1 chr3:134363954-134364454 ( 45) CCCGCCCCCCGCCGCTCCCTCC 1 chr1:184386811-184387311 ( 5) CCCTCCCTCGCTCGCTCCTCGC 1 chr17:48907962-48908462 ( 11) TCCTCCCCCACTCCCTCCTCTC 1 chr6:75206010-75206510 ( 53) CCCTCCCTTCTCCCCGCCCCCC 1 chr2:98346222-98346722 ( 5) CCCTCCCCCGCGCTCCCGGCCC 1 chr2:79512372-79512872 ( 18) CCCGCACCCGGTCCCTCTCCCC 1 chrX:129982192-129982692 ( 27) CCCTCCCTCTCTTGCTCGCTCC 1 chr22:17084613-17085113 ( 60) CCCTCCCCCCGTTCCTCCTTGC 1 chr7:121438449-121438949 ( 16) CCCTCCCCCACCCTCGCTGCCG 1 chr10:72354661-72355161 ( 61) CGCTCGCCCGGCCTCCCCCTCC 1 chr6:33958678-33959178 ( 54) CCCACCCTCTCTGCCCCCCTTC 1 chr19:45691569-45692069 ( 20) CCCTGCCCCCCCCGCTCTGCTC 1 chr21:39313564-39314064 ( 71) CGCGCCCTCCCCTCCCCCACTC 1 chr5:140107576-140108076 ( 57) CTCGCCGCCGCCGCCGCCGCCG 1 chr16:1308127-1308627 ( 71) CCCTCCCTCACTCATTCCCTCC 1 chr19:43526982-43527482 ( 70) TCCGCCCCCGCCCCGCCCTTCC 1 chr6:142885047-142885547 ( 67) CCCTTCCCCTCCTTCTCCCTCC 1 chr3:39152701-39153201 ( 46) CCCTCCCTGACCCCCGCCGGCC 1 chr1:145858534-145859034 ( 48) CCCGCCCCCGGAGCCCCGCCGC 1 chr1:204763669-204764169 ( 58) TCCGCTCTCGCCCCTCCCGCTG 1 chr1:155017330-155017830 ( 22) GCCGCCACCGCTGCCGCCCCTG 1 chrX:71254959-71255459 ( 51) CGCTCTCTCTCTCTCTCTCCCC 1 chr10:97542226-97542726 ( 7) CCCTCCCTCTGCTCTCCCACTC 1 chr8:21788556-21789056 ( 78) CTCTCCCTCGCTCGCTCTTTGC 1 chr3:12994415-12994915 ( 5) CCCACCCCCGCCGCCGTCCCCA 1 chr21:42923899-42924399 ( 67) CCCACCCCGCCACCTTCCGCTC 1 chr5:115170155-115170655 ( 43) CTCGCCCTCGCCCGCACCGTCC 1 chr6:149864228-149864728 ( 18) CCCTCCCCGGGGCCTGCTCTCC 1 chr17:68511809-68512309 ( 2) CCCACTCTCCCTCCGGCCTCCC 1 chr12:51025959-51026459 ( 78) CCCTCGAGCCGCCCCGCGCCCC 1 chr6:131807474-131807974 ( 77) CCCTCCCCGCGCCCCGGCCACC 1 chr4:139083018-139083518 ( 19) GACTCCCTCCCTCCCGCCTCGC 1 chr17:48728667-48729167 ( 58) CGCTCTCTCGCTCTTTCTCTCC 1 chr1:109484011-109484511 ( 22) CGCTCCGTCACCTTCGCGCCTC 1 chr12:15221263-15221763 ( 54) TCCTCCCGCCGCGCTGCCTCCC 1 chr7:149771732-149772232 ( 72) CCCTCCCGGTTCTCCCCCGCTC 1 chr9:99821670-99822170 ( 10) CGCTCTCCCGGCTGCGCGTTCG 1 chr1:44820052-44820552 ( 67) TCCGCACCCGGCGCCGCCCACG 1 chr19:40348304-40348804 ( 66) CCCACCGTCGGCCCGGCGCTCC 1 chr16:31459261-31459761 ( 23) TCCGCCCCGCTTCTCGCCGCTG 1 chr5:1883555-1884055 ( 20) TGCTCCGCCGGCTTCCCCCTGC 1 chr1:63317060-63317560 ( 35) CCCACGGCCCTGCCCGCCCTCC 1 chr16:77212503-77213003 ( 60) TCCACCGCGGCTTCCTCTGTCC 1 chrX:103214794-103215294 ( 39) CCCACGCCCCCTCCTGCAGCCC 1 chr17:7932001-7932501 ( 37) CCCTCTCACGCCTCCCCCTACG 1 chr11:123062395-12306289 ( 43) TCCTGCCCGGCTCCCGCGCCCA 1 chr7:149090399-149090899 ( 34) TCCGCCATGGTCCCCGCGGTCC 1 chr1:159881992-159882492 ( 33) CTCTCGCTCCTTTTCCCCCTTC 1 chr12:14257911-14258411 ( 10) CCCTCTCGCACATTCCCCCCCC 1 chr6:35727551-35728051 ( 73) CCCACACCTGCTCCCTCCCCCA 1 chr16:28863947-28864447 ( 70) CCCTCCACCTCCCGCCCTTCGG 1 chr15:40092246-40092746 ( 36) TGCGCCCGCCCGCTCTCCCTCC 1 chr9:35905972-35906472 ( 60) TCCTCACTCCTTTCTCCCCTTC 1 chr14:105033354-10503385 ( 47) TTCGCTCCCGGTCGCGCTCTCG 1 chr12:28190345-28190845 ( 65) CTCTCGCTCTCCGCTGCCGCCG 1 chr22:21938223-21938723 ( 25) CGCGCTCTCCTCCTCGCTCTCG 1 chr16:31508117-31508617 ( 72) CCCAGCCCCGCCCCTGCCGCAC 1 chr17:50139926-50140426 ( 70) TGCTCTCCCGGCCGCTCCCGGC 1 chr20:38435027-38435527 ( 67) CCCTCGCCGTCCTTCGCCATCG 1 chr19:42176309-42176809 ( 45) TGCTTCCCCCTCCACGCCTCTC 1 chr5:134525825-134526325 ( 77) CTCGCTCTCTCTTGCTCGCTCG 1 chr10:78302860-78303360 ( 44) GCCTTTCCCGCCGCCGCGCCTG 1 chr21:45981028-45981528 ( 71) GGCTCACTCGCCTCTTCCCACC 1 chr22:41446504-41447004 ( 64) CCCGCACCTTCCCGCGCCCCGG 1 chrX:132217208-132217708 ( 36) CCCACCCTCCCCGACTCTACGC 1 chr8:29350376-29350876 ( 60) CGCTGCCCTGCCTACGCTCCTC 1 chr12:10673611-10674111 ( 70) TCCTCCCCCAGCTGCCTCGCTG 1 chr6:167826176-167826676 ( 21) CCCGTCCCCGCCCGTCCGGACC 1 chr1:90851311-90851811 ( 1) TTCTCCGCCCGCTGTCCTCCCC 1 chr6:19836694-19837194 ( 38) CTCTCCACCGCCCCCCTTATCC 1 chr9:20622208-20622708 ( 1) CGCTCGCTTGCTCGCTCGCTCG 1 chr1:84299197-84299697 ( 69) GCCTCTCCCCCTCACCCCCACA 1 chr5:58460913-58461413 ( 34) CACTCACTGGCCTACGCTCCTC 1 chr19:45927494-45927994 ( 31) TGCACGCCCTCTCTCTCTGTCC 1 chr16:1610665-1611165 ( 19) CCCTGCGCCGCCGTCTCTCCTA 1 chr5:5271146-5271646 ( 71) CCCTCACACGGAGGCTCCTCCC 1 chr5:6378234-6378734 ( 42) TCCGCCATCGCCTCGGCCCGTC 1 chr11:102109805-10211030 ( 44) CTCGGCCCCTTTTCCCCGCCCG 1 chr10:29735625-29736125 ( 17) CACGCCCCGCCTCGTTCCCACC 1 chr10:75401870-75402370 ( 21) TCCTCACGCGCACCCCCCTTCA 1 chrX:120468607-120469107 ( 66) TCCACCCCCCGTTACCGGCCCC 1 chr16:30052684-30053184 ( 46) CCCGCCGCCGCCCGCCTGGGTC 1 chr7:10973389-10973889 ( 52) GGCTCCGCCCTCTCCGCGCCTA 1 chr19:43667779-43668279 ( 73) CCCTCGGTCGATTACGCCTCTC 1 chr4:5710636-5711136 ( 3) CACACCGCCCTCCACGCCTCTG 1 chr6:109382213-109382713 ( 22) CCCTCAATCCCCTGCGGCGCCG 1 chr15:70494726-70495226 ( 11) GCCTCCCCTTCCCGCCCAGTTC 1 chr19:43640128-43640628 ( 55) CCCTGTCCCGGTGGCTCAGCTC 1 chr1:200669631-200670131 ( 68) TACGCTCCGCTCCGCTCCGCTC 1 chr6:87155319-87155819 ( 41) CGCTCCGTCGCGTACGCACCTG 1 chr19:18677972-18678472 ( 72) CTCACCCCCATTCACCCCGCGG 1 chr1:30782679-30783179 ( 44) TCCGCCATCCCCTGTTCTCCCA 1 chr5:50963114-50963614 ( 64) CCCACCCAGCCGCCGGCCCCCC 1 chr5:43602870-43603370 ( 39) CTCGGCCCGCGCCCCTTCCCCG 1 chr13:113296791-11329729 ( 25) CTCGGCCCCAGTCCCCCGGACC 1 chr5:73216226-73216726 ( 3) GCCGCCCCCGGAGACTCGGATC 1 chr19:11925252-11925752 ( 27) GCCGCGGCCGCAGTCGCCGCGC 1 chr5:123423258-123423758 ( 72) GTCGCCCGCCTCTCCTCGTCCG 1 chr19:39445656-39446156 ( 79) CTCGCCGTCACTGCTGCGCTCG 1 chr14:103571834-10357233 ( 3) GCCTCCCGGGTTCACGCCATTC 1 chr19:15125471-15125971 ( 47) CCCGGGCACGGCCACGCTCCCG 1 chr12:50025075-50025575 ( 10) CGCTGTCCCGCTGTCCCGGACC 1 chr1:92832134-92832634 ( 5) CCTTCTCCCCAATCCGCCGTCC 1 chr4:107036053-107036553 ( 27) CTCGCCGCGGGCTCCCGCTTTC 1 chr5:179023459-179023959 ( 11) TCCGCTCTCGGCGCTGTGGTTC 1 chr18:31942925-31943425 ( 7) GCTGCCCCCGCGCGCGTCCCTC 1 chr1:44775880-44776380 ( 56) CCCACGCTCGCACCCACCTTGG 1 chr14:49586370-49586870 ( 6) CGCGCCACCGCGCCCGGCGGTC 1 chr11:83071934-83072434 ( 39) TCCTCCACCTCACCGTCCCCAC 1 chr11:67391590-67392090 ( 33) GGCGCCGCGGGCCTCCCCGGTC 1 chr10:116273304-11627380 ( 66) CCCGCGGCCGGACCCGTACTCG 1 chr16:85610264-85610764 ( 37) TCCTGCAGCCGGCGCGCTCCTC 1 chr1:44842881-44843381 ( 40) CCCGGCGCCGCGCCCCGGACCC 1 chr17:29292263-29292763 ( 5) TTCGCTCACGACTCCGCCTCTG 1 chr16:56932025-56932525 ( 2) GACACCGCCGCCGCCGCCATGG 1 chr1:108199724-108200224 ( 2) CGCTCAGGCGGCGCCCCGGCGG 1 chr8:95024704-95025204 ( 70) CGTGCCCTTCGACCCCCCGCCG 1 chr7:25950994-25951494 ( 19) GCCGTGACCTCCGACCCCGCCC 1 chr16:88856884-88857384 ( 21) CGCGTCACGTGACCCGCCGCTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCKCCCYCSCYYCCBCCSYYC MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 9.89882 E= 3.1e-040 -1355 128 -110 -4 -221 120 -48 -71 -1355 186 -1355 -321 -63 -1355 38 111 -1355 165 -131 -221 -134 122 -110 -55 -110 142 -62 -1355 -248 108 -169 41 -1355 155 -76 -199 -148 12 85 -71 -321 108 4 -80 -110 92 -169 37 -1355 104 -62 25 -89 90 -31 -55 -1355 158 -242 -63 -380 8 66 25 -1355 172 -242 -180 -248 108 -31 -41 -180 80 16 -48 -148 101 -242 49 -380 101 -110 45 -180 128 8 -1355 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCKCCCYCSCYYCCBCCSYYC MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 120 E= 3.1e-040 0.000000 0.650000 0.125000 0.225000 0.050000 0.616667 0.191667 0.141667 0.000000 0.975000 0.000000 0.025000 0.150000 0.000000 0.350000 0.500000 0.000000 0.841667 0.108333 0.050000 0.091667 0.625000 0.125000 0.158333 0.108333 0.716667 0.175000 0.000000 0.041667 0.566667 0.083333 0.308333 0.000000 0.783333 0.158333 0.058333 0.083333 0.291667 0.483333 0.141667 0.025000 0.566667 0.275000 0.133333 0.108333 0.508333 0.083333 0.300000 0.000000 0.550000 0.175000 0.275000 0.125000 0.500000 0.216667 0.158333 0.000000 0.800000 0.050000 0.150000 0.016667 0.283333 0.425000 0.275000 0.000000 0.883333 0.050000 0.066667 0.041667 0.566667 0.216667 0.175000 0.066667 0.466667 0.300000 0.166667 0.083333 0.541667 0.050000 0.325000 0.016667 0.541667 0.125000 0.316667 0.066667 0.650000 0.283333 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCCKCCCYCSCYYCCBCCSYYC MEME-7 regular expression -------------------------------------------------------------------------------- [CT]CC[TG]CCC[CT]C[GC][CG][CT][CT][CG]C[GCT]C[CG][CG][CT][CT][CG] -------------------------------------------------------------------------------- Time 2003.39 secs. ******************************************************************************** ******************************************************************************** MOTIF CARCCTCCRCCTCCYGGGTTCAAGYRATYCT MEME-8 width = 31 sites = 11 llr = 304 E-value = 7.9e-031 ******************************************************************************** -------------------------------------------------------------------------------- Motif CARCCTCCRCCTCCYGGGTTCAAGYRATYCT MEME-8 Description -------------------------------------------------------------------------------- Simplified A :a6:::12531:11:1:2::1992:49:::: pos.-specific C a::9a176268:995::13191:25::149: probability G ::41::1231::::1786::::1626::::: matrix T :::::91:::1a::422179::::4:1961a bits 2.1 * * * 1.9 ** * * * 1.7 ** ** * * ** ** * 1.5 ** *** *** **** ** ** Relative 1.3 ** *** *** * ***** ** ** Entropy 1.1 ****** **** * ***** ****** (39.8 bits) 0.8 ****** **** ** ***** ****** 0.6 ***************** ****** ****** 0.4 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel CAACCTCCACCTCCCGGGTTCAAGCGATTCT consensus G GA T C TA C sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARCCTCCRCCTCCYGGGTTCAAGYRATYCT MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr16:179915-180415 - 43 4.74e-17 CGGCTCACTG CAACCTCCGCCTCCCGGGTTCAAACGATTCT CCTGCCTCAG chr15:43904185-43904685 + 62 1.33e-16 cagctcactg caacctccacctcccaggttcaagtaattct catgcctc chr14:102305238-10230573 + 61 2.38e-16 cggctcactg caacctccgcctcccggcttcaagcgattct cctgcctca chr6:27235449-27235949 + 56 4.94e-16 cggctcactg caacctcccactccctggttcaagcgattct tctgcttcaa chrX:17121571-17122071 + 58 4.25e-15 tagctcactg caacctccacttcccgggttcaagtaatttt cctgcctcag chr7:101118532-101119032 + 40 1.28e-13 cggctcactg cagcctcaaactcctggactcaagtgactct cctgtcttag chr11:75328917-75329417 + 62 1.40e-13 gggctcactg cagcctcaacatcctgtgttcaactgatcct cccacctc chr14:49586370-49586870 - 65 1.62e-12 CACTA CAGCCCAGAACTCCTGGACTCAAGCGATCCT CCAGCCTCAG chr9:128829868-128830368 + 64 3.32e-12 tagctcactg caggcttgagctcctgggctcaagggatcct cccacc chr11:74749429-74749929 - 9 2.37e-11 ACACCAATTC CAACCTGCCCCTAACTTGTTCCAACAATTCT GTTTCCCT chr16:31117077-31117577 - 1 1.16e-10 CGGCTCACTG CAACCTCCGCCTCCGGGTTCAAGCGATTCCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARCCTCCRCCTCCYGGGTTCAAGYRATYCT MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:179915-180415 4.7e-17 42_[-8]_27 chr15:43904185-43904685 1.3e-16 61_[+8]_8 chr14:102305238-10230573 2.4e-16 60_[+8]_9 chr6:27235449-27235949 4.9e-16 55_[+8]_14 chrX:17121571-17122071 4.3e-15 57_[+8]_12 chr7:101118532-101119032 1.3e-13 39_[+8]_30 chr11:75328917-75329417 1.4e-13 61_[+8]_8 chr14:49586370-49586870 1.6e-12 64_[-8]_5 chr9:128829868-128830368 3.3e-12 63_[+8]_6 chr11:74749429-74749929 2.4e-11 8_[-8]_61 chr16:31117077-31117577 1.2e-10 [-8]_69 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARCCTCCRCCTCCYGGGTTCAAGYRATYCT MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CARCCTCCRCCTCCYGGGTTCAAGYRATYCT width=31 seqs=11 chr16:179915-180415 ( 43) CAACCTCCGCCTCCCGGGTTCAAACGATTCT 1 chr15:43904185-43904685 ( 62) CAACCTCCACCTCCCAGGTTCAAGTAATTCT 1 chr14:102305238-10230573 ( 61) CAACCTCCGCCTCCCGGCTTCAAGCGATTCT 1 chr6:27235449-27235949 ( 56) CAACCTCCCACTCCCTGGTTCAAGCGATTCT 1 chrX:17121571-17122071 ( 58) CAACCTCCACTTCCCGGGTTCAAGTAATTTT 1 chr7:101118532-101119032 ( 40) CAGCCTCAAACTCCTGGACTCAAGTGACTCT 1 chr11:75328917-75329417 ( 62) CAGCCTCAACATCCTGTGTTCAACTGATCCT 1 chr14:49586370-49586870 ( 65) CAGCCCAGAACTCCTGGACTCAAGCGATCCT 1 chr9:128829868-128830368 ( 64) CAGGCTTGAGCTCCTGGGCTCAAGGGATCCT 1 chr11:74749429-74749929 ( 9) CAACCTGCCCCTAACTTGTTCCAACAATTCT 1 chr16:31117077-31117577 ( 1) CAACCTCCGCCTCCGGGTTCAAGCGATTCCT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARCCTCCRCCTCCYGGGTTCAAGYRATYCT MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 11.4507 E= 7.9e-031 -1010 190 -1010 -1010 211 -1010 -1010 -1010 146 -1010 44 -1010 -1010 176 -156 -1010 -1010 190 -1010 -1010 -1010 -156 -1010 197 -135 144 -156 -135 -35 125 -56 -1010 123 -56 2 -1010 23 125 -156 -1010 -135 161 -1010 -135 -1010 -1010 -1010 211 -135 176 -1010 -1010 -135 176 -1010 -1010 -1010 102 -156 65 -135 -1010 144 -35 -1010 -1010 161 -35 -35 -156 125 -135 -1010 2 -1010 165 -1010 -156 -1010 197 -135 176 -1010 -1010 197 -156 -1010 -1010 197 -1010 -156 -1010 -35 -56 125 -1010 -1010 76 -56 65 65 -1010 125 -1010 197 -1010 -1010 -135 -1010 -156 -1010 197 -1010 44 -1010 146 -1010 176 -1010 -135 -1010 -1010 -1010 211 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARCCTCCRCCTCCYGGGTTCAAGYRATYCT MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 11 E= 7.9e-031 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.636364 0.000000 0.363636 0.000000 0.000000 0.909091 0.090909 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.090909 0.000000 0.909091 0.090909 0.727273 0.090909 0.090909 0.181818 0.636364 0.181818 0.000000 0.545455 0.181818 0.272727 0.000000 0.272727 0.636364 0.090909 0.000000 0.090909 0.818182 0.000000 0.090909 0.000000 0.000000 0.000000 1.000000 0.090909 0.909091 0.000000 0.000000 0.090909 0.909091 0.000000 0.000000 0.000000 0.545455 0.090909 0.363636 0.090909 0.000000 0.727273 0.181818 0.000000 0.000000 0.818182 0.181818 0.181818 0.090909 0.636364 0.090909 0.000000 0.272727 0.000000 0.727273 0.000000 0.090909 0.000000 0.909091 0.090909 0.909091 0.000000 0.000000 0.909091 0.090909 0.000000 0.000000 0.909091 0.000000 0.090909 0.000000 0.181818 0.181818 0.636364 0.000000 0.000000 0.454545 0.181818 0.363636 0.363636 0.000000 0.636364 0.000000 0.909091 0.000000 0.000000 0.090909 0.000000 0.090909 0.000000 0.909091 0.000000 0.363636 0.000000 0.636364 0.000000 0.909091 0.000000 0.090909 0.000000 0.000000 0.000000 1.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CARCCTCCRCCTCCYGGGTTCAAGYRATYCT MEME-8 regular expression -------------------------------------------------------------------------------- CA[AG]CCTCC[AG][CA]CTCC[CT]GGG[TC]TCAAG[CT][GA]AT[TC]CT -------------------------------------------------------------------------------- Time 2245.72 secs. ******************************************************************************** ******************************************************************************** MOTIF CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY MEME-9 width = 30 sites = 53 llr = 672 E-value = 5.5e-025 ******************************************************************************** -------------------------------------------------------------------------------- Motif CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY MEME-9 Description -------------------------------------------------------------------------------- Simplified A :1:1:11121::12::11131412:2:22: pos.-specific C 732366346366447444837423738555 probability G 11111:1:::3:::::22::2:2:1:1:1: matrix T 25763255261454363324:355252425 bits 2.1 1.9 1.7 1.5 Relative 1.3 Entropy 1.1 * * ** * * (18.3 bits) 0.8 * * * * ** * * * 0.6 * * ** * **** ** * * **** * 0.4 ****** ********* **** ***** * 0.2 ****************************** 0.0 ------------------------------ Multilevel CTTTCCTTCTCCTCCTCCCTCATTCTCCCT consensus TCCCTTCC CGTCTTCTT AGCGC C T C sequence G C T A A -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr19:42176309-42176809 + 67 2.36e-13 CACGCCTCTC CTTTCCTCATCCTTCTTGCCCCTTCTCCCT TTTT chr17:48728667-48729167 + 6 2.55e-11 tctct ctttctctctctctctctctctctctctct ctctgtctct chr19:17779270-17779770 - 3 1.27e-10 CTGCAGCGAC CTTTCCACCTGCTTCTCCCACTGCCACCCT TA chr7:111855124-111855624 - 55 3.81e-10 GCCTCAGAGT CATTCCTTCTCCCTTTTGCCCTTTGTCTCT GTCTGTGGCC chr11:103109270-10310977 + 62 7.60e-10 CTGGTTTctt cttccttcccccttcccccaacttccctcc accccttcc chr16:1308127-1308627 - 31 3.21e-09 CTCACTCATT CATTCCCTCCCTCACTCACTCATTCTCACT CTCACTCATT chr5:77644692-77645192 + 29 5.03e-09 TCCCATCCGT CTCTCTTTCCCCTTTTCGCTCCTTTCCCTT TCTCTCTCCC chrX:25013744-25014244 + 69 5.82e-09 tgggttcctt cttttttcccctttcctctcccttctttcc gt chr1:86157032-86157532 + 51 7.76e-09 CAATTTGATG TTTCCCTCTTGCTTCTCTCTCATCCCCAAT CTTTTTCTCT chrX:129982192-129982692 + 51 1.03e-08 ctcgctccct cccttcgcctcctcctccccattccccccc acccGCGTAG chr7:149690765-149691265 + 57 1.55e-08 TTGGAGCCTC CTTCGCTCCTTTTCCTTCCTCTTCCCCTAC CAGTCCACAA chr6:52420843-52421343 + 66 3.00e-08 ccaaccccat tcttttttctccatcttctACATTTTCCAC AATTT chr6:85642856-85643356 + 22 3.86e-08 ctcctccagc tcctccttctccccctaccaccaccaccac cACTAGCCTC chr1:159881992-159882492 + 61 6.31e-08 CTTCTCCCTT TCTTCCTTTCCTTCCTAACTGCTTCTCACT GATTTTAGGC chr17:68511809-68512309 - 70 1.59e-07 T TCCTCCGCCTGCTCTTCGCTCTCTCTCCGC GCAGCTATCG chrX:132217208-132217708 - 3 1.59e-07 TCTACGCTCT TTCCCCTCCCCCTCCTGTAACTTCCTCTTC TT chrX:71254959-71255459 + 18 1.59e-07 tctcCTCCAG CCCCctttctgtccttgtctgtctctctct tctcgctctc chr6:18584947-18585447 + 53 1.98e-07 acTGTTTTAT CTGTCCCCCTTTATCTCCCCCCATCTTCCT GTCATTGGAA chr1:150321472-150321972 - 6 2.46e-07 CCAGGTACTC CTTTCACACTCCTTCCCGCTGAACCCTCCC GCTTC chr1:233635847-233636347 - 53 2.73e-07 GACTCCACTA CTTCCCTAATCTCATCTGCTACGACTCCCC ACTGTTTATT chr5:35777527-35778027 + 15 2.73e-07 CCTTCAAATC CTGTTCTTATTTTCCTGGCACTTTTTTCCT TCCGTTGTTA chr19:35869991-35870491 - 8 4.13e-07 CCCGCCTTTT CCTCTATTCCGCCTCTCCAAAACTCTCCCT TCCCGTT chr10:88978937-88979437 - 69 4.56e-07 TC CCTTCCTTATCTCTCCTCCCCAGATCCCTA CGCTCATACA chr6:33958678-33959178 + 1 4.56e-07 . TTTCCACACTGTTCCCTCCACCCTTTCCTT TTTCCCTGTC chr14:35814325-35814825 + 45 5.04e-07 agtttttcaa ccctttctctgctccctgctgcccccttct ggtagtctcc chr11:64916396-64916896 + 21 7.44e-07 TGGCCCAGCT CAGTTCCTACGCTCCCTCCCCAGCCCCTCC TCAGCCCGAG chr2:73177148-73177648 + 60 7.44e-07 AAGCACTGAT CCCTCCGCTCCTTCCCGGCACAGCCCCTTC CCGGCACGGC chr1:201740097-201740597 - 35 7.44e-07 GCCTAAGCTC CTTTCCTTCCCTTTCCACTCCCTAGAGCCC TCCACACACC chr19:39436257-39436757 + 63 8.18e-07 AATGTCCTTC CTTTCAGTTTCCTCTTCCCAGAATGTTTCC CATCCTTC chr1:145977744-145978244 - 71 8.98e-07 . TCTTCTTCTTCTTTCTCCTCATCCTCCTCT GAAGTTACTT chr10:43573501-43574001 + 68 9.86e-07 CTGCCTCTGA CGCTTCTTCAGTCACTTCCACCCACACTCC CTC chr18:31942925-31943425 - 43 1.08e-06 CCTCTCCTCA GCTCTCTTCCCTTGCCCCTACCGTCTCCTT TAACACAGTC chr6:33929661-33930161 - 12 1.42e-06 GATGACCACA TTTTCTTTATCCATTCGTCAGTTACACATT GGGGTTGTTT chr21:41783537-41784037 + 56 1.69e-06 ctgaccaatc gttaccttttgctccctgttgattctgcct agtaaatacg chr8:57747911-57748411 - 43 2.18e-06 CCTGTGGTGC TTTCTCTAAAGCTGCTTCCTCTTTCACTAC GCTCATTTTG chr6:73580764-73581264 - 8 2.58e-06 CAGCTCACTA CTTTCTCCACTCTCTTATCCCAGTGTCAAT GTCCATA chr21:33642266-33642766 - 29 2.80e-06 CGCTCCCTCC CCTGGCGCCTCCACTCTTCTCTACCTCCTT CGCTCCCTCC chr1:44820052-44820552 + 12 3.04e-06 ATGGGTCACT GATCTCCTTTGCTCTCCTATGCTCCTCTCT GCTGGTCCTC chr9:99821670-99822170 + 38 3.04e-06 AGCGGAGTCT CCTGCCTCCCGCCCCCCACCCCTCCAGCTC CTGCTCCTCC chr19:37077773-37078273 + 9 3.29e-06 TCAGTCCA CCTGGCATCTCCCATTGTCACACACACCCC AAGGGCCTGG chr21:43262411-43262911 - 3 3.56e-06 CCACCACCAC CACCTTCACTCCCACCACCACCATCACCAT CA chr19:38848900-38849400 + 38 3.86e-06 GCTAAAAGTG CATTTCACAAGTCCTCTTCCCATTTTCAAT GCCTACAAAA chr11:86302331-86302831 - 63 4.17e-06 GCACCCAG CTTCCCACGCTCCATCCTCACATACCCACC CAAAATATAA chr13:26964728-26965228 - 63 4.17e-06 TGGTGCTG CTTGTCCTCATCCACTTGCTGAGTGCCTCC CCATCTGGCA chr5:115545037-115545537 - 54 4.50e-06 TTTATATGGG GTTTCCCTTTTTCCTTGGCTCTGATTTTCC TCTCTTGCCT chr12:55681390-55681890 - 35 4.86e-06 TAGGACTTTG CTCCTTGTCTCCTACTTGACAATTTCCTAT TTGCCAGAGT chr15:74291471-74291971 - 56 6.08e-06 CTGCCTTCCT CCTACCCATTCCATCCCCTAGATCCCCAAT CATGCAAAAT chr17:68378465-68378965 + 33 7.04e-06 ACCAACACCT TGTTTTTCCCCTAACTGACTGCTCCTCTGT CTGGAAAATC chr21:46323987-46324487 - 26 7.04e-06 CCGCTGCTCT TGCTCAACTTCCATCTCCCTCAGACTCCGC GCGGGCCGCC chr16:83967679-83968179 - 40 1.07e-05 TCCATCTATA CATCCATCCACCCATCCTCCCATCCATCCA TCCGGCCGGC chr19:9791493-9791993 + 61 1.07e-05 TCACAGAGAC CTTACCCCGTCTCCCCGTCACCGAGACCGC TCCCCCATCT chr10:78302860-78303360 - 4 1.14e-05 GCCAGCACCA ACTTCCCCACGTCCCTTCCCCCAAGTCCGC GTA chr1:32240619-32241119 - 35 1.80e-05 CCTGGAATCA GTCATCACCTCCTTCCCTTTATTCTACCGT CCCAAGGGCC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr19:42176309-42176809 2.4e-13 66_[+9]_4 chr17:48728667-48729167 2.5e-11 5_[+9]_65 chr19:17779270-17779770 1.3e-10 2_[-9]_68 chr7:111855124-111855624 3.8e-10 54_[-9]_16 chr11:103109270-10310977 7.6e-10 61_[+9]_9 chr16:1308127-1308627 3.2e-09 30_[-9]_40 chr5:77644692-77645192 5e-09 28_[+9]_42 chrX:25013744-25014244 5.8e-09 68_[+9]_2 chr1:86157032-86157532 7.8e-09 50_[+9]_20 chrX:129982192-129982692 1e-08 50_[+9]_20 chr7:149690765-149691265 1.6e-08 56_[+9]_14 chr6:52420843-52421343 3e-08 65_[+9]_5 chr6:85642856-85643356 3.9e-08 21_[+9]_49 chr1:159881992-159882492 6.3e-08 60_[+9]_10 chr17:68511809-68512309 1.6e-07 69_[-9]_1 chrX:132217208-132217708 1.6e-07 2_[-9]_68 chrX:71254959-71255459 1.6e-07 17_[+9]_53 chr6:18584947-18585447 2e-07 52_[+9]_18 chr1:150321472-150321972 2.5e-07 5_[-9]_65 chr1:233635847-233636347 2.7e-07 52_[-9]_18 chr5:35777527-35778027 2.7e-07 14_[+9]_56 chr19:35869991-35870491 4.1e-07 7_[-9]_63 chr10:88978937-88979437 4.6e-07 68_[-9]_2 chr6:33958678-33959178 4.6e-07 [+9]_70 chr14:35814325-35814825 5e-07 44_[+9]_26 chr11:64916396-64916896 7.4e-07 20_[+9]_50 chr2:73177148-73177648 7.4e-07 59_[+9]_11 chr1:201740097-201740597 7.4e-07 34_[-9]_36 chr19:39436257-39436757 8.2e-07 62_[+9]_8 chr1:145977744-145978244 9e-07 70_[-9] chr10:43573501-43574001 9.9e-07 67_[+9]_3 chr18:31942925-31943425 1.1e-06 42_[-9]_28 chr6:33929661-33930161 1.4e-06 11_[-9]_59 chr21:41783537-41784037 1.7e-06 55_[+9]_15 chr8:57747911-57748411 2.2e-06 42_[-9]_28 chr6:73580764-73581264 2.6e-06 7_[-9]_63 chr21:33642266-33642766 2.8e-06 28_[-9]_42 chr1:44820052-44820552 3e-06 11_[+9]_59 chr9:99821670-99822170 3e-06 37_[+9]_33 chr19:37077773-37078273 3.3e-06 8_[+9]_62 chr21:43262411-43262911 3.6e-06 2_[-9]_68 chr19:38848900-38849400 3.9e-06 37_[+9]_33 chr11:86302331-86302831 4.2e-06 62_[-9]_8 chr13:26964728-26965228 4.2e-06 62_[-9]_8 chr5:115545037-115545537 4.5e-06 53_[-9]_17 chr12:55681390-55681890 4.9e-06 34_[-9]_36 chr15:74291471-74291971 6.1e-06 55_[-9]_15 chr17:68378465-68378965 7e-06 32_[+9]_38 chr21:46323987-46324487 7e-06 25_[-9]_45 chr16:83967679-83968179 1.1e-05 39_[-9]_31 chr19:9791493-9791993 1.1e-05 60_[+9]_10 chr10:78302860-78303360 1.1e-05 3_[-9]_67 chr1:32240619-32241119 1.8e-05 34_[-9]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY width=30 seqs=53 chr19:42176309-42176809 ( 67) CTTTCCTCATCCTTCTTGCCCCTTCTCCCT 1 chr17:48728667-48729167 ( 6) CTTTCTCTCTCTCTCTCTCTCTCTCTCTCT 1 chr19:17779270-17779770 ( 3) CTTTCCACCTGCTTCTCCCACTGCCACCCT 1 chr7:111855124-111855624 ( 55) CATTCCTTCTCCCTTTTGCCCTTTGTCTCT 1 chr11:103109270-10310977 ( 62) CTTCCTTCCCCCTTCCCCCAACTTCCCTCC 1 chr16:1308127-1308627 ( 31) CATTCCCTCCCTCACTCACTCATTCTCACT 1 chr5:77644692-77645192 ( 29) CTCTCTTTCCCCTTTTCGCTCCTTTCCCTT 1 chrX:25013744-25014244 ( 69) CTTTTTTCCCCTTTCCTCTCCCTTCTTTCC 1 chr1:86157032-86157532 ( 51) TTTCCCTCTTGCTTCTCTCTCATCCCCAAT 1 chrX:129982192-129982692 ( 51) CCCTTCGCCTCCTCCTCCCCATTCCCCCCC 1 chr7:149690765-149691265 ( 57) CTTCGCTCCTTTTCCTTCCTCTTCCCCTAC 1 chr6:52420843-52421343 ( 66) TCTTTTTTCTCCATCTTCTACATTTTCCAC 1 chr6:85642856-85643356 ( 22) TCCTCCTTCTCCCCCTACCACCACCACCAC 1 chr1:159881992-159882492 ( 61) TCTTCCTTTCCTTCCTAACTGCTTCTCACT 1 chr17:68511809-68512309 ( 70) TCCTCCGCCTGCTCTTCGCTCTCTCTCCGC 1 chrX:132217208-132217708 ( 3) TTCCCCTCCCCCTCCTGTAACTTCCTCTTC 1 chrX:71254959-71255459 ( 18) CCCCCTTTCTGTCCTTGTCTGTCTCTCTCT 1 chr6:18584947-18585447 ( 53) CTGTCCCCCTTTATCTCCCCCCATCTTCCT 1 chr1:150321472-150321972 ( 6) CTTTCACACTCCTTCCCGCTGAACCCTCCC 1 chr1:233635847-233636347 ( 53) CTTCCCTAATCTCATCTGCTACGACTCCCC 1 chr5:35777527-35778027 ( 15) CTGTTCTTATTTTCCTGGCACTTTTTTCCT 1 chr19:35869991-35870491 ( 8) CCTCTATTCCGCCTCTCCAAAACTCTCCCT 1 chr10:88978937-88979437 ( 69) CCTTCCTTATCTCTCCTCCCCAGATCCCTA 1 chr6:33958678-33959178 ( 1) TTTCCACACTGTTCCCTCCACCCTTTCCTT 1 chr14:35814325-35814825 ( 45) CCCTTTCTCTGCTCCCTGCTGCCCCCTTCT 1 chr11:64916396-64916896 ( 21) CAGTTCCTACGCTCCCTCCCCAGCCCCTCC 1 chr2:73177148-73177648 ( 60) CCCTCCGCTCCTTCCCGGCACAGCCCCTTC 1 chr1:201740097-201740597 ( 35) CTTTCCTTCCCTTTCCACTCCCTAGAGCCC 1 chr19:39436257-39436757 ( 63) CTTTCAGTTTCCTCTTCCCAGAATGTTTCC 1 chr1:145977744-145978244 ( 71) TCTTCTTCTTCTTTCTCCTCATCCTCCTCT 1 chr10:43573501-43574001 ( 68) CGCTTCTTCAGTCACTTCCACCCACACTCC 1 chr18:31942925-31943425 ( 43) GCTCTCTTCCCTTGCCCCTACCGTCTCCTT 1 chr6:33929661-33930161 ( 12) TTTTCTTTATCCATTCGTCAGTTACACATT 1 chr21:41783537-41784037 ( 56) GTTACCTTTTGCTCCCTGTTGATTCTGCCT 1 chr8:57747911-57748411 ( 43) TTTCTCTAAAGCTGCTTCCTCTTTCACTAC 1 chr6:73580764-73581264 ( 8) CTTTCTCCACTCTCTTATCCCAGTGTCAAT 1 chr21:33642266-33642766 ( 29) CCTGGCGCCTCCACTCTTCTCTACCTCCTT 1 chr1:44820052-44820552 ( 12) GATCTCCTTTGCTCTCCTATGCTCCTCTCT 1 chr9:99821670-99822170 ( 38) CCTGCCTCCCGCCCCCCACCCCTCCAGCTC 1 chr19:37077773-37078273 ( 9) CCTGGCATCTCCCATTGTCACACACACCCC 1 chr21:43262411-43262911 ( 3) CACCTTCACTCCCACCACCACCATCACCAT 1 chr19:38848900-38849400 ( 38) CATTTCACAAGTCCTCTTCCCATTTTCAAT 1 chr11:86302331-86302831 ( 63) CTTCCCACGCTCCATCCTCACATACCCACC 1 chr13:26964728-26965228 ( 63) CTTGTCCTCATCCACTTGCTGAGTGCCTCC 1 chr5:115545037-115545537 ( 54) GTTTCCCTTTTTCCTTGGCTCTGATTTTCC 1 chr12:55681390-55681890 ( 35) CTCCTTGTCTCCTACTTGACAATTTCCTAT 1 chr15:74291471-74291971 ( 56) CCTACCCATTCCATCCCCTAGATCCCCAAT 1 chr17:68378465-68378965 ( 33) TGTTTTTCCCCTAACTGACTGCTCCTCTGT 1 chr21:46323987-46324487 ( 26) TGCTCAACTTCCATCTCCCTCAGACTCCGC 1 chr16:83967679-83968179 ( 40) CATCCATCCACCCATCCTCCCATCCATCCA 1 chr19:9791493-9791993 ( 61) CTTACCCCGTCTCCCCGTCACCGAGACCGC 1 chr10:78302860-78303360 ( 4) ACTTCCCCACGTCCCTTCCCCCAAGTCCGC 1 chr1:32240619-32241119 ( 35) GTCATCACCTCCTTCCCTTTATTCTACCGT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 10.1994 E= 5.5e-025 -362 130 -151 -3 -81 26 -224 108 -1237 -13 -224 159 -162 8 -183 129 -1237 122 -224 47 -103 126 -1237 8 -103 8 -124 108 -103 69 -1237 97 -30 113 -283 -30 -130 17 -1237 138 -1237 113 8 -81 -1237 117 -1237 77 -81 42 -1237 114 -30 63 -283 63 -1237 142 -1237 29 -1237 69 -1237 129 -130 56 -66 55 -162 63 -13 19 -162 153 -1237 -62 55 8 -1237 70 -81 130 -37 -1237 63 42 -1237 29 -81 -66 -37 108 -16 34 -1237 97 -1237 134 -102 -30 -3 8 -1237 108 -1237 156 -224 -62 -62 87 -1237 63 -30 98 -124 -45 -262 76 -1237 114 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 53 E= 5.5e-025 0.018868 0.660377 0.094340 0.226415 0.132075 0.320755 0.056604 0.490566 0.000000 0.245283 0.056604 0.698113 0.075472 0.283019 0.075472 0.566038 0.000000 0.622642 0.056604 0.320755 0.113208 0.641509 0.000000 0.245283 0.113208 0.283019 0.113208 0.490566 0.113208 0.433962 0.000000 0.452830 0.188679 0.584906 0.037736 0.188679 0.094340 0.301887 0.000000 0.603774 0.000000 0.584906 0.283019 0.132075 0.000000 0.603774 0.000000 0.396226 0.132075 0.358491 0.000000 0.509434 0.188679 0.415094 0.037736 0.358491 0.000000 0.716981 0.000000 0.283019 0.000000 0.433962 0.000000 0.566038 0.094340 0.396226 0.169811 0.339623 0.075472 0.415094 0.245283 0.264151 0.075472 0.773585 0.000000 0.150943 0.339623 0.283019 0.000000 0.377358 0.132075 0.660377 0.207547 0.000000 0.358491 0.358491 0.000000 0.283019 0.132075 0.169811 0.207547 0.490566 0.207547 0.339623 0.000000 0.452830 0.000000 0.679245 0.132075 0.188679 0.226415 0.283019 0.000000 0.490566 0.000000 0.792453 0.056604 0.150943 0.150943 0.490566 0.000000 0.358491 0.188679 0.528302 0.113208 0.169811 0.037736 0.452830 0.000000 0.509434 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CYTYYCYYCYCYYYCYYBCHCHTYCYCYCY MEME-9 regular expression -------------------------------------------------------------------------------- [CT][TC][TC][TC][CT][CT][TC][TC]C[TC][CG][CT][TC][CT][CT][TC][CT][CTG]C[TAC][CG][ACT][TG][TCA]C[TCA]C[CT]C[TC] -------------------------------------------------------------------------------- Time 2486.68 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG MEME-10 width = 31 sites = 7 llr = 226 E-value = 6.9e-018 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG MEME-10 Description -------------------------------------------------------------------------------- Simplified A ::11:76::::9::46:::::19::::4a:: pos.-specific C aa::::::aaa::6:36:4::::::94:::: probability G :::9:13::::1a:1::::999:aa1:6:aa matrix T ::9:a11a:::::4414a611:1:::6:::: bits 2.1 * * * * 1.9 ** * **** * * ** *** 1.7 ** * **** * * ** *** 1.5 *** * ****** * *** *** Relative 1.3 ***** ****** * ******* *** Entropy 1.1 ***** ******* *************** (46.6 bits) 0.8 ****** ******* *************** 0.6 ******************************* 0.4 ******************************* 0.2 ******************************* 0.0 ------------------------------- Multilevel CCTGTAATCCCAGCAACTTGGGAGGCTGAGG consensus G TTCT C CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr14:49586370-49586870 + 30 2.80e-17 gtggcgcgtg cctgtagtcccagctactcgggaggctgagg ctggaggatc chr9:128192577-128193077 - 14 4.99e-17 GTGGCTCACC CCTGTAATCCCAGCACTTTGGGAGGCCAAGG CAGGCGAATC chr10:8703027-8703527 + 69 8.08e-17 gtggtgtttg cctgtaatcccagcttctcgggaggctgagg c chr10:6410491-6410991 + 31 1.70e-16 gtggttcaca cctgtattcccagtaatttgggaggccaagg cgggtggatc chr16:179915-180415 + 8 2.14e-16 gcatgca cctgtgatcccagttactcgggaggctgagg caggagaatc chr19:37468498-37468998 - 56 6.18e-16 GTGGCTCACG CCTGTAATCCCAGCACTTTGGAAGGCCAAGG TGGGCAGATC chr8:12753910-12754410 + 68 2.31e-12 CCCGCGGTTC CCAATTGTCCCGGTGACTTTTGTGGGTGAGG AA -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:49586370-49586870 2.8e-17 29_[+10]_40 chr9:128192577-128193077 5e-17 13_[-10]_56 chr10:8703027-8703527 8.1e-17 68_[+10]_1 chr10:6410491-6410991 1.7e-16 30_[+10]_39 chr16:179915-180415 2.1e-16 7_[+10]_62 chr19:37468498-37468998 6.2e-16 55_[-10]_14 chr8:12753910-12754410 2.3e-12 67_[+10]_2 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG width=31 seqs=7 chr14:49586370-49586870 ( 30) CCTGTAGTCCCAGCTACTCGGGAGGCTGAGG 1 chr9:128192577-128193077 ( 14) CCTGTAATCCCAGCACTTTGGGAGGCCAAGG 1 chr10:8703027-8703527 ( 69) CCTGTAATCCCAGCTTCTCGGGAGGCTGAGG 1 chr10:6410491-6410991 ( 31) CCTGTATTCCCAGTAATTTGGGAGGCCAAGG 1 chr16:179915-180415 ( 8) CCTGTGATCCCAGTTACTCGGGAGGCTGAGG 1 chr19:37468498-37468998 ( 56) CCTGTAATCCCAGCACTTTGGAAGGCCAAGG 1 chr8:12753910-12754410 ( 68) CCAATTGTCCCGGTGACTTTTGTGGGTGAGG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 12.3944 E= 6.9e-018 -945 190 -945 -945 -945 190 -945 -945 -70 -945 -945 188 -70 -945 168 -945 -945 -945 -945 211 162 -945 -91 -70 130 -945 9 -70 -945 -945 -945 211 -945 190 -945 -945 -945 190 -945 -945 -945 190 -945 -945 188 -945 -91 -945 -945 -945 190 -945 -945 109 -945 89 89 -945 -91 89 130 9 -945 -70 -945 109 -945 89 -945 -945 -945 211 -945 68 -945 130 -945 -945 168 -70 -945 -945 168 -70 -70 -945 168 -945 188 -945 -945 -70 -945 -945 190 -945 -945 -945 190 -945 -945 168 -91 -945 -945 68 -945 130 89 -945 109 -945 211 -945 -945 -945 -945 -945 190 -945 -945 -945 190 -945 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 7 E= 6.9e-018 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.142857 0.000000 0.000000 0.857143 0.142857 0.000000 0.857143 0.000000 0.000000 0.000000 0.000000 1.000000 0.714286 0.000000 0.142857 0.142857 0.571429 0.000000 0.285714 0.142857 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.857143 0.000000 0.142857 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.571429 0.000000 0.428571 0.428571 0.000000 0.142857 0.428571 0.571429 0.285714 0.000000 0.142857 0.000000 0.571429 0.000000 0.428571 0.000000 0.000000 0.000000 1.000000 0.000000 0.428571 0.000000 0.571429 0.000000 0.000000 0.857143 0.142857 0.000000 0.000000 0.857143 0.142857 0.142857 0.000000 0.857143 0.000000 0.857143 0.000000 0.000000 0.142857 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.857143 0.142857 0.000000 0.000000 0.428571 0.000000 0.571429 0.428571 0.000000 0.571429 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTGTARTCCCAGYWMYTYGGGAGGCYRAGG MEME-10 regular expression -------------------------------------------------------------------------------- CCTGTA[AG]TCCCAG[CT][AT][AC][CT]T[TC]GGGAGGC[TC][GA]AGG -------------------------------------------------------------------------------- Time 2719.46 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr14:95452413-95452913 3.53e-01 100 chr16:66549347-66549847 7.70e-02 35_[-2(1.07e-05)]_50 chrX:48834537-48835037 9.99e-15 13_[+4(4.82e-05)]_13_[-6(8.02e-19)]_\ 28 chr10:97542226-97542726 3.53e-04 3_[+9(5.04e-07)]_67 chr19:33081454-33081954 6.83e-01 100 chr13:26964728-26965228 2.71e-04 40_[-4(2.23e-06)]_6_[-9(4.17e-06)]_\ 8 chr19:42244596-42245096 2.16e-03 33_[+2(5.81e-07)]_52 chr14:70254538-70255038 7.70e-01 100 chrX:25013744-25014244 4.39e-11 23_[+9(3.21e-09)]_15_[+9(5.82e-09)]_\ 2 chr1:115138929-115139429 4.21e-03 15_[+2(7.03e-06)]_31_[+4(8.99e-07)]_\ 23 chr10:80260913-80261413 9.40e-01 100 chr15:88878673-88879173 1.13e-03 78_[+2(2.53e-06)]_7 chr1:56571181-56571681 3.36e-04 63_[+2(3.20e-06)]_22 chr12:15221263-15221763 3.53e-01 53_[+7(2.74e-06)]_25 chr19:9791493-9791993 4.46e-02 60_[+9(1.07e-05)]_10 chr20:34362595-34363095 1.36e-05 3_[+5(7.26e-08)]_75 chr11:33912567-33913067 3.19e-01 100 chr14:105033354-10503385 1.73e-01 46_[+7(7.03e-06)]_9_[+7(1.09e-05)]_\ 1 chr19:42075333-42075833 1.62e-02 49_[+9(4.46e-05)]_21 chr6:33958678-33959178 1.33e-05 [+9(4.56e-07)]_23_[+7(1.68e-07)]_25 chrX:71301195-71301695 1.34e-01 100 chr16:87574697-87575197 1.52e-01 100 chr2:121095127-121095627 3.50e-01 100 chr5:1883555-1884055 1.28e-01 19_[+7(4.43e-06)]_59 chr12:122266222-12226672 8.14e-01 100 chr17:65516318-65516818 3.23e-01 100 chr14:88013773-88014273 8.36e-02 100 chr6:136822698-136823198 5.00e-01 100 chr3:194324218-194324718 9.61e-02 41_[+2(3.62e-06)]_44 chr3:12994415-12994915 3.45e-01 4_[+7(1.45e-06)]_74 chr19:47427120-47427620 2.13e-02 65_[+8(8.54e-05)]_4 chrX:64394485-64394985 9.28e-02 100 chr16:56932025-56932525 2.74e-01 100 chr19:49017629-49018129 1.40e-01 22_[-3(2.70e-05)]_19_[-2(9.01e-05)]_\ 22 chrX:115912709-115913209 2.34e-05 47_[+5(4.11e-08)]_31 chr11:86302331-86302831 1.11e-03 62_[-9(4.17e-06)]_8 chr1:26921791-26922291 9.63e-01 100 chrX:17121571-17122071 7.53e-10 18_[+8(1.93e-11)]_8_[+8(4.25e-15)]_\ 12 chr6:35468068-35468568 5.33e-01 100 chr17:4366253-4366753 1.18e-02 37_[+9(3.41e-05)]_33 chr1:81126981-81127481 4.78e-04 36_[+5(1.27e-06)]_42 chr22:43862623-43863123 7.37e-01 69_[+3(7.59e-05)]_9 chr5:14168623-14169123 2.35e-02 66_[+2(3.62e-06)]_19 chr1:150321472-150321972 5.97e-03 5_[-9(2.46e-07)]_29_[-9(1.59e-05)]_\ 6 chr8:89689059-89689559 6.64e-05 27_[+9(1.69e-06)]_43 chr5:10357892-10358392 5.74e-01 100 chr12:46446636-46447136 5.34e-01 100 chr19:46746538-46747038 9.00e-03 10_[-3(1.78e-05)]_68 chr7:135200980-135201480 1.09e-01 13_[-2(3.20e-06)]_72 chr10:102766634-10276713 1.51e-07 [+5(9.48e-11)]_34_[+9(6.01e-05)]_14 chrX:71254959-71255459 1.33e-06 17_[+9(1.59e-07)]_5_[+9(2.76e-09)]_\ 18 chr17:29292263-29292763 7.08e-02 100 chr1:201740097-201740597 1.63e-05 34_[-9(7.44e-07)]_36 chr19:35248041-35248541 9.02e-01 100 chr10:94165144-94165644 2.56e-01 100 chr19:46412986-46413486 8.85e-01 100 chr5:111550465-111550965 5.44e-01 100 chr10:78302860-78303360 2.10e-02 3_[-9(1.14e-05)]_10_[-7(1.22e-05)]_\ 35 chr7:33932654-33933154 1.24e-02 56_[+9(7.26e-05)]_14 chr5:136729797-136730297 1.01e-01 7_[+5(7.65e-05)]_48_[-5(3.62e-05)]_\ 1 chr16:86443551-86444051 2.56e-08 1_[-6(6.50e-09)]_35_[-6(1.84e-12)]_\ 4 chr3:123066311-123066811 8.68e-03 17_[-2(7.03e-06)]_9_[-5(3.47e-05)]_\ 37 chr6:155400581-155401081 7.66e-01 100 chr5:50963114-50963614 1.07e-02 63_[-7(4.45e-05)]_15 chr6:85642856-85643356 1.09e-05 21_[+9(3.86e-08)]_49 chr16:31117077-31117577 3.34e-10 [-8(1.16e-10)]_2_[-4(5.78e-05)]_19_\ [-3(3.27e-10)]_10 chr1:109484011-109484511 9.77e-02 21_[+7(2.74e-06)]_57 chr14:68665859-68666359 9.86e-04 [-4(9.99e-07)]_84 chr2:65033612-65034112 2.02e-27 39_[+1(2.80e-29)]_16 chr21:29024076-29024576 6.49e-02 100 chr10:44233516-44234016 2.33e-01 100 chr16:88856884-88857384 3.62e-01 100 chr17:74514008-74514508 4.65e-01 100 chr7:81684948-81685448 7.09e-01 100 chr9:99821670-99822170 9.14e-05 9_[-7(3.09e-06)]_6_[+9(3.04e-06)]_4_\ [+2(4.71e-05)]_14 chr1:40039734-40040234 7.04e-01 100 chr6:41591748-41592248 1.16e-05 39_[+6(2.33e-11)]_31 chr5:134525825-134526325 8.35e-03 27_[+3(6.12e-05)]_27_[+7(1.22e-05)]_\ 2 chr1:86157032-86157532 2.82e-03 50_[+9(7.76e-09)]_20 chr6:149864228-149864728 1.79e-03 17_[-7(1.65e-06)]_9_[+2(1.59e-05)]_\ 37 chr14:102305238-10230573 2.97e-16 1_[+3(3.83e-11)]_10_[-3(2.62e-05)]_\ 5_[+8(2.38e-16)]_9 chr1:44820052-44820552 2.71e-03 11_[+9(3.04e-06)]_25_[-7(3.49e-06)]_\ 12 chr19:37655817-37656317 7.24e-01 100 chr21:39380436-39380936 3.87e-01 100 chr6:19836694-19837194 3.54e-02 37_[-7(1.67e-05)]_41 chr1:30782679-30783179 3.22e-02 52_[-10(3.06e-05)]_17 chr10:8703027-8703527 1.85e-18 5_[-3(3.05e-09)]_4_[+5(2.45e-07)]_\ 15_[+10(8.08e-17)]_1 chr16:28863947-28864447 4.01e-03 69_[+7(6.28e-06)]_9 chr4:3954441-3954941 8.15e-01 100 chr19:39436257-39436757 1.62e-03 14_[+9(4.50e-06)]_18_[+9(8.18e-07)]_\ 8 chr12:26135017-26135517 1.05e-01 100 chr10:110620235-11062073 4.46e-02 45_[+6(6.52e-05)]_25 chr6:35727551-35728051 1.02e-02 72_[+7(6.28e-06)]_6 chr2:20381553-20382053 2.27e-04 41_[+2(1.75e-06)]_44 chr12:124469172-12446967 1.69e-01 100 chr22:35380668-35381168 2.71e-07 1_[+6(4.68e-14)]_69 chr3:55702025-55702525 9.47e-02 78_[-2(1.44e-05)]_7 chr5:431024-431524 1.13e-02 53_[+6(7.07e-05)]_17 chr4:3009386-3009886 2.71e-01 100 chr6:136289373-136289873 4.81e-02 65_[+5(8.53e-05)]_13 chr1:44775880-44776380 7.89e-02 55_[-7(9.07e-05)]_23 chr22:21938223-21938723 6.91e-03 14_[-7(4.98e-06)]_64 chr1:81801257-81801757 2.48e-01 100 chr13:77698294-77698794 9.11e-02 50_[+7(8.32e-05)]_28 chr9:35905972-35906472 1.96e-03 59_[-7(7.03e-06)]_19 chr19:37077773-37078273 4.50e-03 8_[+9(3.29e-06)]_22_[-8(2.47e-05)]_\ 9 chrX:54482227-54482727 1.41e-05 36_[-2(8.95e-07)]_12_[-4(1.05e-05)]_\ 21 chr15:74291471-74291971 2.40e-02 55_[-9(6.08e-06)]_15 chr6:167826176-167826676 2.53e-01 20_[+7(1.50e-05)]_58 chr16:30052684-30053184 3.75e-02 45_[-7(2.76e-05)]_33 chr1:179039038-179039538 1.47e-03 41_[-4(1.51e-07)]_43 chr3:138774414-138774914 1.52e-02 39_[-2(5.12e-05)]_46 chr2:218909168-218909668 1.35e-02 13_[+2(6.34e-06)]_72 chr1:92832134-92832634 1.97e-01 4_[-7(7.63e-05)]_74 chrX:102494847-102495347 4.12e-27 3_[-5(1.14e-07)]_2_[+1(5.60e-29)]_\ 28 chr19:40831731-40832231 2.38e-02 28_[+4(4.23e-06)]_56 chr15:70494726-70495226 1.43e-02 10_[+7(3.35e-05)]_68 chr17:81683467-81683967 5.70e-01 100 chr5:128083241-128083741 7.37e-01 100 chr3:23019834-23020334 3.35e-03 79_[-4(2.23e-06)]_5 chr19:37654986-37655486 5.50e-01 100 chr12:6866859-6867359 9.74e-01 100 chr8:117936648-117937148 2.27e-30 3_[-3(5.47e-12)]_2_[-1(7.33e-23)]_\ 28 chrX:107893910-107894410 2.33e-03 76_[-5(1.14e-07)]_2 chr7:149690765-149691265 1.10e-03 13_[+9(7.60e-05)]_13_[+9(1.55e-08)]_\ 14 chr5:174382663-174383163 3.59e-01 100 chr14:103571834-10357233 1.75e-05 1_[-8(1.12e-08)]_2_[-4(1.05e-05)]_\ 50 chr10:60434193-60434693 1.22e-05 11_[+5(5.22e-05)]_9_[+5(7.26e-08)]_\ 36 chr16:179915-180415 1.99e-24 7_[+10(2.14e-16)]_4_[-8(4.74e-17)]_\ 2_[-4(5.20e-07)]_9 chr21:43262411-43262911 4.46e-03 2_[-9(3.56e-06)]_9_[-9(1.07e-05)]_\ 29 chr12:110887837-11088833 1.01e-01 100 chr3:174441126-174441626 4.25e-01 45_[-2(5.12e-05)]_40 chr6:73580764-73581264 7.55e-11 7_[-9(2.58e-06)]_2_[-2(7.88e-07)]_\ 20_[-5(1.27e-09)]_4 chr12:123233661-12323416 4.28e-02 1_[-2(1.18e-05)]_5_[+3(7.80e-05)]_\ 57 chrX:131768296-131768796 1.79e-01 47_[+9(8.69e-05)]_23 chr1:33342223-33342723 1.02e-01 9_[-2(3.05e-05)]_76 chr10:93074415-93074915 6.68e-01 100 chr11:64998027-64998527 3.57e-01 100 chrX:103214794-103215294 7.24e-03 38_[-7(4.98e-06)]_40 chr20:23937146-23937646 3.42e-04 43_[+4(7.41e-08)]_15_[+2(4.71e-05)]_\ 11 chr16:77409215-77409715 6.09e-03 83_[+2(3.05e-05)]_2 chr1:224884724-224885224 1.98e-01 100 chr16:83967679-83968179 2.91e-03 39_[-9(1.07e-05)]_31 chr10:6410491-6410991 4.23e-10 30_[+10(1.70e-16)]_4_[-8(4.83e-05)]_\ 4 chr3:17430956-17431456 6.14e-05 14_[-5(8.36e-07)]_[+2(2.32e-05)]_15_\ [-4(2.19e-05)]_18 chr6:149473306-149473806 1.84e-01 68_[-6(1.46e-05)]_2 chr10:121310083-12131058 5.63e-01 100 chr1:162023947-162024447 6.88e-01 100 chr1:145977744-145978244 2.09e-04 11_[+4(5.78e-05)]_43_[-9(8.98e-07)] chr19:43526982-43527482 7.58e-02 69_[-7(3.11e-07)]_9 chr16:77212503-77213003 1.39e-01 59_[-7(4.98e-06)]_19 chr9:41229849-41230349 7.62e-03 20_[+6(2.11e-08)]_16_[+6(8.51e-06)]_\ 4 chr12:12645286-12645786 5.11e-01 100 chr21:46323987-46324487 3.82e-02 25_[-9(7.04e-06)]_45 chr5:109468630-109469130 6.54e-09 31_[+5(1.37e-11)]_47 chr16:31508117-31508617 7.53e-03 1_[-2(1.44e-05)]_55_[+7(8.79e-06)]_\ 7 chr10:43573501-43574001 1.86e-04 44_[+2(9.65e-06)]_8_[+9(9.86e-07)]_\ 3 chr6:44264901-44265401 5.26e-01 100 chr14:35814325-35814825 6.52e-04 44_[+9(5.04e-07)]_26 chr21:39313564-39314064 1.04e-02 25_[-7(9.87e-05)]_23_[-7(2.67e-07)]_\ 8 chr12:14257911-14258411 6.75e-06 9_[-7(6.28e-06)]_5_[-4(3.87e-06)]_1_\ [+9(6.93e-05)]_17 chr1:241408197-241408697 1.28e-02 14_[-4(8.22e-05)]_70 chr12:50025075-50025575 7.74e-02 9_[+7(6.99e-05)]_69 chr9:118170031-118170531 8.00e-04 34_[+4(4.09e-07)]_50 chrX:120468607-120469107 7.38e-04 26_[+7(1.67e-05)]_17_[+9(4.17e-06)]_\ 5 chr2:121266648-121267148 3.99e-27 13_[-5(3.38e-08)]_2_[+1(2.80e-29)]_\ 18 chr3:4320335-4320835 7.68e-04 8_[-9(6.31e-05)]_12_[-2(1.93e-05)]_\ 35 chr3:154428521-154429021 8.42e-01 100 chr16:3191319-3191819 6.83e-01 100 chr19:57477623-57478123 1.07e-02 8_[-8(9.30e-06)]_18_[+5(7.65e-05)]_\ 21 chr1:90851311-90851811 3.59e-01 [-7(1.67e-05)]_78 chrX:72305771-72306271 2.18e-06 [+6(5.78e-09)]_54_[+2(4.71e-05)]_1 chr14:18667518-18668018 1.06e-01 100 chr11:32892076-32892576 5.08e-03 33_[-2(1.18e-05)]_52 chr5:77644692-77645192 2.12e-04 4_[+9(9.08e-05)]_22_[+9(5.82e-09)]_\ 14 chr2:73177148-73177648 6.94e-04 59_[+9(7.44e-07)]_11 chr5:149799045-149799545 2.16e-02 67_[-2(3.05e-05)]_18 chr17:63826679-63827179 3.73e-01 7_[+4(5.12e-05)]_77 chr7:92179637-92180137 5.74e-02 49_[+3(1.84e-05)]_29 chr7:101118532-101119032 7.70e-11 21_[+4(3.38e-09)]_2_[+8(1.28e-13)]_\ 30 chr17:39687698-39688198 6.62e-01 100 chr12:55681390-55681890 2.24e-03 34_[-9(4.86e-06)]_36 chr2:172428116-172428616 5.70e-02 59_[-2(6.57e-05)]_26 chr4:87084303-87084803 1.66e-29 14_[+8(5.26e-06)]_3_[-1(5.60e-29)]_\ 7 chr1:92030849-92031349 1.71e-01 57_[-2(3.20e-06)]_28 chr1:63317060-63317560 1.05e-03 34_[+7(4.98e-06)]_44 chr3:16517013-16517513 1.24e-14 52_[+5(2.20e-14)]_26 chr19:9075688-9076188 4.49e-02 100 chr16:69131711-69132211 1.06e-02 74_[+4(1.42e-05)]_10 chr10:75401870-75402370 3.01e-01 20_[-7(2.76e-05)]_58 chr1:112619919-112620419 2.05e-03 47_[-5(4.27e-07)]_31 chrX:135463854-135464354 4.79e-01 100 chr7:150378245-150378745 6.03e-01 21_[+2(2.12e-05)]_64 chr11:93741638-93742138 2.47e-01 100 chr13:98033222-98033722 1.89e-06 [+5(4.29e-10)]_78 chr4:76804075-76804575 6.05e-03 45_[+5(2.66e-07)]_33 chr5:74327096-74327596 2.50e-05 [+5(6.19e-09)]_78 chr17:48728667-48729167 3.38e-08 5_[+9(2.55e-11)]_34_[+9(3.40e-08)]_\ 1 chr19:34677738-34678238 3.64e-02 67_[-7(3.35e-05)]_11 chr19:42176309-42176809 2.52e-08 13_[+7(4.45e-05)]_[+9(1.98e-07)]_1_\ [+9(2.36e-13)]_4 chr17:78057900-78058400 1.37e-02 38_[-4(4.09e-07)]_46 chr5:73216226-73216726 2.02e-02 2_[+7(4.88e-05)]_32_[-2(5.12e-05)]_\ 29 chr13:23558616-23559116 5.68e-05 56_[+6(1.00e-09)]_14 chr2:73907913-73908413 9.93e-02 100 chr8:29350376-29350876 4.27e-01 59_[+7(1.35e-05)]_19 chr2:223837975-223838475 1.41e-27 47_[+1(5.60e-29)]_8 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4.04e-02 10_[+2(1.20e-06)]_75 chr17:13114518-13115018 1.87e-01 100 chr1:46246991-46247491 3.10e-01 33_[-10(9.47e-05)]_36 chr7:135653636-135654136 6.78e-30 25_[+1(1.75e-24)]_2_[+3(1.57e-10)]_\ 6 chr3:39152701-39153201 7.78e-05 10_[+7(7.63e-05)]_13_[+7(7.38e-07)]_\ 33 chr1:148402262-148402762 9.93e-01 100 chr12:48903747-48904247 8.07e-20 [-1(5.04e-21)]_55 chr2:111897765-111898265 1.23e-01 68_[-2(7.03e-06)]_17 chr3:159787249-159787749 1.43e-04 32_[-2(1.04e-06)]_5_[-3(2.20e-05)]_\ 26 chr4:169957708-169958208 1.78e-02 41_[-2(2.08e-07)]_44 chr6:131807474-131807974 1.61e-03 14_[+4(1.97e-07)]_46_[-7(2.42e-06)]_\ 2 chr4:154506199-154506699 5.33e-03 9_[+2(2.83e-06)]_76 chr6:19837190-19837690 3.76e-01 100 chr5:139517314-139517814 1.96e-26 27_[-1(7.26e-19)]_28 chr19:39320108-39320608 1.81e-12 [-6(8.02e-19)]_70 chr6:43510324-43510824 7.66e-05 33_[-2(3.62e-06)]_13_[+3(6.12e-05)]_\ 17 chr9:86855049-86855549 7.91e-01 100 chr4:141133222-141133722 2.17e-13 42_[+6(1.29e-16)]_28 chr4:139083018-139083518 1.71e-04 18_[+7(2.74e-06)]_60 chr8:28445365-28445865 1.70e-02 10_[+1(8.29e-05)]_45 chr3:170222117-170222617 1.96e-01 100 chr21:42923899-42924399 1.47e-03 66_[-7(1.65e-06)]_12 chr1:37764217-37764717 9.27e-01 100 chr6:52420843-52421343 2.02e-04 25_[+9(6.31e-05)]_10_[+9(3.00e-08)]_\ 5 chr1:233635847-233636347 1.03e-02 34_[-2(9.73e-05)]_3_[-9(2.73e-07)]_\ 18 chr2:69307390-69307890 5.03e-05 43_[+7(3.49e-06)]_35 chr1:145858534-145859034 1.33e-04 6_[+2(1.30e-05)]_1_[+7(3.68e-05)]_3_\ [+7(9.72e-07)]_31 chr6:134672888-134673388 5.75e-27 9_[-1(2.80e-29)]_46 chr21:32709973-32710473 5.77e-27 3_[-3(1.26e-08)]_[-1(4.73e-21)]_30 chr20:5582322-5582822 1.07e-03 18_[+2(4.52e-06)]_[+9(4.01e-05)]_37 chr17:751097-751597 1.42e-03 19_[+4(4.23e-06)]_22_[+2(1.00e-07)]_\ 28 chr2:208040770-208041270 5.68e-02 34_[+4(5.20e-07)]_50 chr1:221085655-221086155 1.52e-05 17_[-2(2.41e-07)]_16_[+1(1.20e-05)]_\ 7 chr19:44551793-44552293 8.96e-25 29_[-1(4.98e-27)]_26 chr19:44094218-44094718 1.66e-01 3_[+2(6.57e-05)]_82 chr6:33929661-33930161 2.14e-02 11_[-9(1.42e-06)]_59 chr5:140107576-140108076 3.23e-01 56_[-7(3.11e-07)]_22 chr8:61714680-61715180 3.43e-02 23_[-2(4.71e-05)]_62 chr1:51648403-51648903 6.29e-03 41_[+4(1.97e-07)]_43 chr7:102391039-102391539 1.78e-32 [-3(5.95e-10)]_3_[-1(6.88e-28)]_30 chr10:72354661-72355161 5.21e-04 60_[-7(1.68e-07)]_18 chr17:4407703-4408203 5.23e-28 23_[-1(5.60e-29)]_32 chr7:149406464-149406964 1.16e-28 24_[-1(5.60e-29)]_31 chr22:41667573-41668073 6.95e-19 34_[+1(2.20e-21)]_21 chr12:10673611-10674111 7.37e-04 18_[+2(2.25e-06)]_4_[+9(1.69e-05)]_\ 2_[+7(1.50e-05)]_9 chr1:62356058-62356558 1.56e-31 4_[-3(1.09e-12)]_2_[-1(1.04e-23)]_\ 27 chr19:11925252-11925752 1.72e-03 26_[-7(5.85e-05)]_[+7(4.88e-05)]_\ [+2(1.71e-07)]_15 chrX:54999803-55000303 5.60e-02 25_[+2(2.41e-07)]_60 chr15:66461249-66461749 4.67e-32 4_[-3(7.87e-13)]_[-1(4.02e-26)]_29 chr17:62827760-62828260 5.42e-03 22_[+2(1.44e-05)]_63 chr1:984382-984882 7.07e-36 2_[-5(1.30e-10)]_4_[+1(9.53e-28)]_3_\ [+3(1.57e-10)]_2 chr15:74434057-74434557 6.37e-01 100 chr3:169863530-169864030 1.93e-02 26_[+1(2.85e-05)]_29 chr19:45653162-45653662 5.96e-30 21_[-1(9.53e-28)]_9_[+5(3.35e-06)]_\ 3 chr1:228861053-228861553 2.01e-02 58_[-4(3.51e-05)]_26 chr11:15073449-15073949 3.59e-02 31_[+2(2.83e-06)]_54 chr1:28964378-28964878 1.54e-19 26_[-1(1.72e-18)]_29 chr8:118127309-118127809 4.68e-21 23_[-1(1.86e-17)]_32 chr6:2748214-2748714 4.04e-02 17_[-4(3.74e-05)]_11_[-4(4.23e-06)]_\ 40 chr2:401187-401687 2.44e-07 21_[+5(8.98e-07)]_25_[+2(8.95e-07)]_\ 17 chr1:33458894-33459394 3.93e-32 31_[+1(4.98e-27)]_2_[+3(6.81e-11)] chr2:79512372-79512872 4.30e-05 17_[+7(7.42e-08)]_15_[+2(9.65e-06)]_\ 31 chr22:23248114-23248614 6.10e-16 11_[-3(5.47e-12)]_2_[+5(1.49e-08)]_\ 15_[-2(3.38e-07)]_13 chr3:41158133-41158633 2.89e-28 8_[-2(5.12e-05)]_2_[-1(7.55e-26)]_\ 30 chr22:38768458-38768958 4.33e-31 [-3(1.20e-11)]_3_[-1(2.27e-25)]_30 chr22:41446504-41447004 4.56e-02 63_[+7(1.35e-05)]_15 chr11:66720266-66720766 3.36e-01 100 chr10:101258431-10125893 8.90e-28 29_[+1(5.60e-29)]_26 chr4:53929877-53930377 6.42e-03 37_[-4(1.31e-05)]_2_[-2(1.37e-06)]_\ 30 chr21:34129014-34129514 1.61e-01 100 chr1:35691550-35692050 2.42e-09 [+5(3.31e-12)]_78 chr19:49746252-49746752 9.09e-03 47_[+4(4.79e-08)]_37 chr11:102109805-10211030 9.62e-03 43_[-7(2.50e-05)]_[-2(1.93e-05)]_20 chr19:45691569-45692069 3.53e-04 19_[+7(1.97e-07)]_33_[+7(4.88e-05)]_\ 4 chr20:43456975-43457475 7.15e-01 100 chr2:20584178-20584678 3.77e-01 100 chr5:176005687-176006187 1.24e-33 29_[+1(5.60e-29)]_3_[+3(1.35e-11)]_\ 1 chr1:201223111-201223611 8.14e-30 33_[+1(1.32e-23)]_[+3(4.79e-12)] chr14:36767596-36768096 4.24e-03 9_[+4(1.53e-05)]_75 chr15:70111678-70112178 5.33e-04 44_[+2(4.51e-07)]_41 chr17:7656955-7657455 7.36e-02 47_[+4(2.19e-05)]_37 chr15:84142754-84143254 4.30e-02 70_[-2(5.69e-06)]_15 chr19:45927494-45927994 1.49e-06 20_[-9(1.07e-05)]_33_[+2(1.30e-05)]_\ 2 chr11:73120821-73121321 3.35e-04 26_[+2(7.82e-06)]_59 chr1:84891991-84892491 1.28e-27 21_[-1(2.80e-29)]_34 chr7:121438449-121438949 2.05e-05 15_[+7(1.04e-07)]_3_[+4(8.09e-07)]_\ 44 chr6:18584947-18585447 3.26e-08 15_[-6(7.18e-08)]_7_[+9(1.98e-07)]_\ 18 chr17:57849960-57850460 4.39e-01 100 chr2:240194344-240194844 1.16e-01 100 chr3:86969446-86969946 1.28e-26 29_[+1(5.60e-29)]_26 chr10:21241020-21241520 5.04e-27 23_[-1(8.83e-29)]_2_[+5(1.27e-06)]_\ 8 chr13:39385526-39386026 1.71e-04 22_[+2(2.08e-07)]_63 chr4:110411678-110412178 1.84e-02 23_[-4(1.84e-06)]_16_[-4(1.84e-06)]_\ 29 chr20:4613025-4613525 1.00e-34 [-3(1.52e-11)]_3_[-1(2.80e-29)]_30 chr4:5710636-5711136 4.51e-06 18_[+10(2.37e-05)]_16_\ [-4(5.20e-07)]_19 chr21:32578444-32578944 4.74e-03 55_[-2(2.08e-07)]_30 chr19:15125471-15125971 1.88e-01 46_[-7(6.40e-05)]_32 chr12:51025959-51026459 2.29e-03 77_[+7(2.42e-06)]_1 chr1:54577420-54577920 2.57e-11 1_[+6(1.29e-08)]_25_[-2(1.00e-07)]_\ 29 chr18:48465163-48465663 5.53e-03 46_[+1(9.97e-05)]_9 chr1:39720387-39720887 7.79e-22 29_[-1(7.48e-24)]_26 chr15:36925666-36926166 1.00e-05 17_[+5(9.64e-07)]_[+2(2.89e-07)]_46 chr19:40348304-40348804 2.64e-02 [-6(6.70e-05)]_35_[+7(3.94e-06)]_13 chr10:32207574-32208074 5.12e-25 4_[-5(4.26e-06)]_20_[+1(3.35e-25)]_\ 9 chrX:120664487-120664987 1.24e-26 30_[+1(5.60e-29)]_25 chr1:112395875-112396375 1.72e-01 100 chr19:48782549-48783049 9.01e-27 30_[+1(5.60e-29)]_25 chr5:175871379-175871879 4.55e-03 43_[-4(4.79e-08)]_41 chr1:51956454-51956954 5.44e-03 39_[+2(2.53e-06)]_46 chr5:80488407-80488907 1.31e-03 35_[+2(2.08e-07)]_10_[-5(6.58e-05)]_\ 18 chr20:44829502-44830002 1.21e-03 37_[+2(4.51e-07)]_48 chr20:57698122-57698622 1.91e-01 100 chr21:32493540-32494040 7.61e-29 30_[+1(5.60e-29)]_3_[+3(3.05e-06)] chr1:228838626-228839126 1.81e-02 14_[+2(6.57e-05)]_15_[+2(1.75e-06)]_\ 41 chr1:159881992-159882492 9.43e-05 [+9(8.71e-06)]_30_[+9(6.31e-08)]_10 chr17:81018002-81018502 4.40e-02 51_[-2(1.20e-06)]_34 chr3:194583792-194584292 7.84e-01 100 chr2:98346222-98346722 1.10e-05 4_[-7(6.26e-08)]_1_[-2(3.20e-06)]_\ 58 chr17:7932001-7932501 3.75e-03 36_[-7(5.60e-06)]_42 chr1:24593620-24594120 2.06e-27 40_[+1(2.80e-29)]_15 chr10:96640914-96641414 4.07e-06 1_[+6(1.52e-08)]_28_[-2(5.81e-07)]_\ 26 chr4:147616942-147617442 5.78e-04 64_[+2(7.82e-06)]_21 chr22:42473819-42474319 4.77e-32 9_[-5(7.45e-10)]_1_[+1(7.44e-28)]_1_\ [+3(2.01e-08)] chr20:2646896-2647396 5.78e-29 24_[+1(2.80e-29)]_1_[+3(5.49e-05)]_\ 8 chr6:73461335-73461835 1.63e-26 1_[-1(5.60e-29)]_2_[+5(2.68e-12)]_1_\ [+5(6.00e-06)]_7 chr10:74418420-74418920 1.62e-10 8_[-5(6.24e-07)]_30_[-6(2.98e-09)]_\ 10 chr8:127914211-127914711 6.76e-05 1_[+5(2.04e-05)]_9_[+2(1.00e-07)]_\ 53 chr17:49368166-49368666 2.03e-28 23_[-1(5.60e-29)]_32 chr4:107036053-107036553 7.43e-05 6_[-2(9.65e-06)]_26_[+9(1.13e-07)]_\ 23 chr5:58460913-58461413 4.88e-04 11_[-9(6.55e-06)]_59 chr14:77040207-77040707 2.71e-02 22_[+2(1.98e-06)]_63 chr7:149771732-149772232 8.66e-04 71_[+7(3.09e-06)]_7 chr6:90369148-90369648 2.15e-01 54_[+2(1.44e-05)]_31 chr17:76842116-76842616 7.06e-02 35_[-2(3.38e-07)]_50 chr13:19863590-19864090 3.15e-03 46_[+2(8.95e-07)]_39 chr21:32258605-32259105 1.92e-26 29_[+1(6.88e-28)]_26 chr5:142233607-142234107 1.78e-02 43_[+4(5.57e-08)]_41 chr4:84582169-84582669 2.29e-01 37_[-2(7.03e-06)]_48 chr17:35763669-35764169 8.94e-31 4_[-3(8.78e-10)]_[-1(6.14e-27)]_29 chr15:72473916-72474416 2.74e-03 50_[+4(2.24e-07)]_34 chrX:135625982-135626482 1.99e-27 4_[+10(8.81e-05)]_19_[+1(2.27e-27)]_\ 1 chr11:71928313-71928813 1.03e-03 78_[-5(4.11e-08)] chr16:1610665-1611165 4.43e-02 18_[-7(2.26e-05)]_60 chr19:55117887-55118387 2.31e-16 37_[+8(9.31e-15)]_1_[-10(2.47e-10)] chr17:68511809-68512309 3.75e-07 1_[-7(2.42e-06)]_7_[-7(4.98e-06)]_\ 17_[-9(1.59e-07)]_1 chr8:37892197-37892697 7.08e-33 30_[+1(8.83e-29)]_[+3(4.35e-08)]_3 chrX:129984518-129985018 2.41e-05 69_[+7(2.13e-06)]_9 chr3:39383773-39384273 2.78e-02 57_[-2(2.83e-06)]_28 chr12:131454338-13145483 1.75e-27 14_[-1(2.80e-29)]_41 chr1:44842881-44843381 1.96e-02 11_[-7(5.34e-05)]_67 chr6:36642753-36643253 4.06e-05 23_[-2(1.37e-06)]_4_[+4(5.47e-06)]_\ 42 chr17:8093649-8094149 4.36e-26 22_[-1(5.60e-29)]_33 chr11:57527031-57527531 1.33e-02 60_[-2(1.44e-05)]_25 chr1:65002571-65003071 1.03e-03 28_[+4(1.51e-06)]_56 chr17:48816705-48817205 2.33e-03 34_[+3(7.01e-05)]_9_[+4(1.72e-07)]_\ 19 chr1:149899379-149899879 2.75e-04 18_[+3(2.47e-05)]_16_[-4(3.22e-07)]_\ 28 chr8:12753910-12754410 1.19e-09 43_[+2(2.83e-06)]_9_[+10(2.31e-12)]_\ 2 chr7:10973389-10973889 2.88e-05 51_[-7(3.04e-05)]_10_[-2(5.13e-07)]_\ 2 chr17:76737309-76737809 3.83e-04 21_[-2(2.53e-06)]_64 chr1:15876241-15876741 1.60e-02 53_[-2(4.52e-06)]_32 chr15:40092246-40092746 1.33e-10 1_[-6(3.42e-15)]_4_[+7(7.03e-06)]_\ 43 chr5:160243018-160243518 1.66e-31 2_[-3(2.99e-08)]_4_[-1(5.60e-29)]_\ 27 chrX:123770199-123770699 3.96e-31 29_[-1(5.34e-28)]_26 chr16:21820747-21821247 8.67e-28 31_[+1(2.97e-28)]_24 chr22:17084613-17085113 9.66e-06 17_[-8(2.47e-05)]_11_[-7(8.78e-08)]_\ 19 chr16:30052468-30052968 1.81e-36 5_[-3(1.54e-13)]_1_[-1(2.65e-28)]_\ [+5(6.72e-07)]_5 chr14:102639271-10263977 4.97e-26 4_[-5(3.95e-07)]_[+1(5.60e-29)]_29 chr18:48873506-48874006 1.62e-32 32_[+1(8.83e-29)]_[+3(2.99e-08)]_1 chr1:111747264-111747764 2.85e-05 52_[+2(2.39e-08)]_33 chr1:236531605-236532105 3.73e-02 67_[-2(7.03e-06)]_18 chr21:33642266-33642766 5.58e-07 2_[-7(6.69e-10)]_18_[-7(1.11e-06)]_\ 36 chr6:142885047-142885547 5.01e-11 25_[-4(1.97e-07)]_22_[+9(3.21e-09)]_\ 7 chr9:35102935-35103435 3.43e-04 40_[+2(6.19e-08)]_45 chr17:50139926-50140426 1.25e-03 69_[+7(1.22e-05)]_9 chr3:63343712-63344212 3.47e-03 19_[-4(1.30e-07)]_65 chr1:116556488-116556988 7.13e-04 69_[+2(2.83e-06)]_16 chrX:150692743-150693243 5.53e-05 3_[-9(8.18e-07)]_67 chr6:7684864-7685364 2.64e-04 31_[-2(2.41e-07)]_22_[-9(8.69e-05)]_\ 2 chr16:27203571-27204071 2.03e-01 36_[+2(1.18e-05)]_49 chr20:25237860-25238360 1.43e-03 80_[-2(1.20e-06)]_5 chr10:114359304-11435980 8.67e-06 37_[+2(2.08e-07)]_15_[-4(4.23e-06)]_\ 17 chr17:34706005-34706505 1.92e-04 54_[-2(1.55e-06)]_31 chr3:9976916-9977416 3.91e-02 32_[+2(1.98e-06)]_53 chr19:35869991-35870491 7.05e-04 7_[-9(4.13e-07)]_5_[-7(9.07e-05)]_\ 36 chr10:12656443-12656943 2.71e-02 100 chr7:143345312-143345812 2.90e-01 35_[-4(8.22e-05)]_49 chr16:30570495-30570995 1.09e-36 30_[+1(2.80e-29)]_1_[+3(9.74e-13)]_\ 2 chr1:6404492-6404992 1.21e-27 17_[-1(5.60e-29)]_38 chr19:35881941-35882441 7.40e-27 25_[-1(1.50e-26)]_10_[+2(2.78e-05)]_\ 5 chr1:145977545-145978045 3.54e-03 36_[+2(1.19e-07)]_49 chr18:21704812-21705312 7.61e-03 59_[+2(7.03e-06)]_26 chr17:75855458-75855958 2.48e-02 14_[+2(2.08e-07)]_71 chr5:160008634-160009134 1.26e-27 15_[-1(2.80e-29)]_40 chr1:116878999-116879499 8.15e-03 73_[-2(3.91e-07)]_12 chr19:43626069-43626569 6.93e-05 49_[+4(2.03e-06)]_3_[-10(1.94e-05)]_\ 1 chr11:74749429-74749929 5.46e-09 8_[-8(2.37e-11)]_61 chr6:3612740-3613240 7.42e-03 46_[-4(9.99e-07)]_38 chr20:52105095-52105595 1.37e-03 48_[+2(1.19e-07)]_37 chr15:74433854-74434354 1.21e-03 22_[-2(1.71e-07)]_4_[+8(8.89e-06)]_\ 28 chr16:52191435-52191935 6.68e-04 29_[+2(1.20e-06)]_56 chr21:37435163-37435663 8.92e-03 61_[+4(2.53e-07)]_23 chr9:128192577-128193077 6.64e-13 13_[-10(4.99e-17)]_26_\ [+4(6.93e-09)]_14 chr21:45981028-45981528 5.69e-06 29_[+2(2.41e-07)]_26_[-7(1.35e-05)]_\ 8 chr21:33025531-33026031 1.13e-01 29_[-2(9.65e-06)]_56 chr19:16660212-16660712 8.98e-05 1_[+4(2.02e-08)]_11_[+8(4.28e-05)]_\ 41 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: surya ********************************************************************************