# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 TATTTATTTATTTATTTATTTATT MEME-1 TATTTATTTATTTATTTATTTATT 6.7e-420 8.9e-423 -971.80 0.0 37 477 413 434 0.07757 3.7e-425 238 1 TATTTATTTATTTATT MEME-2 TATTTATTTATTTATT 3.9e-395 5.2e-398 -914.77 0.0 37 485 403 439 0.07629 2.2e-400 242 1 TTTGAGACRGAGTCTC MEME-3 TTTGAGACRGAGTCTC 6.3e-123 8.3e-126 -288.00 0.0 97 485 320 433 0.20000 3.5e-128 242 1 RCTCTGTCRCCC MEME-4 RCTCTGTCRCCC 7.9e-080 1.1e-082 -188.76 0.0 117 489 281 400 0.23926 4.3e-085 244 1 TWTTTATTTWTT MEME-5 TWTTTATTTWTT 7.5e-362 1.0e-364 -838.15 0.0 41 489 407 464 0.08384 4.1e-367 244 1 ACAGGCRTGAGCCACCRYGCCY MEME-6 ACAGGCRTGAGCCACCRYGCCY 3.5e-011 4.7e-014 -30.69 0.0 373 479 333 355 0.77871 2.0e-016 239 1 CTCTGTYGC MEME-8 CTCTGTYGC 1.6e-072 2.2e-075 -171.91 0.0 116 492 259 375 0.23577 9.0e-078 245 1 CCACCAYGCCYGGCY MEME-10 CCACCAYGCCYGGCY 1.8e-013 2.4e-016 -35.97 0.0 380 486 360 381 0.78189 9.8e-019 242 2 AATAAATA DREME-1 AATAAATA 2.3e-366 3.1e-369 -848.52 0.0 45 493 405 440 0.09128 1.3e-371 246 2 GAGDC DREME-2 GAGWC 4.4e-003 5.8e-006 -12.06 0.0 92 496 162 580 0.18548 2.3e-008 247 2 ACASAG DREME-3 ACAGAG 8.3e-050 1.1e-052 -119.64 0.0 113 495 238 403 0.22828 4.5e-055 247 2 AGAGYGA DREME-6 AGAGYGA 9.9e-048 1.3e-050 -114.86 0.0 116 494 163 228 0.23482 5.3e-053 246 2 CACCACB DREME-7 CACCACB 1.3e-004 1.7e-007 -15.56 0.0 378 494 251 277 0.76518 7.1e-010 246 2 GCMAC DREME-8 GCMAC 6.9e-002 9.1e-005 -9.30 0.0 354 496 450 559 0.71371 3.7e-007 247 3 M0104_1.02 (ARID3B)_(Mus_musculus)_(DBD_0.99) AWATTAATWAN 3.5e-079 4.7e-082 -187.26 0.0 58 490 239 516 0.11837 1.9e-084 244 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 1.8e-043 2.3e-046 -105.07 0.0 56 492 194 548 0.11382 9.5e-049 245 3 M0212_1.02 (TCFL5)_(Mus_musculus)_(DBD_1.00) NBCDCGHGVN 3.6e0000 4.7e-003 -5.35 0.0 353 491 365 454 0.71894 1.9e-005 245 3 M0396_1.02 (OSR2)_(Mus_musculus)_(DBD_1.00) WACRGTAGCN 1.8e-001 2.3e-004 -8.36 0.0 331 491 458 599 0.67413 9.5e-007 245 3 M0398_1.02 (ZSCAN10)_(Mus_musculus)_(DBD_0.82) NGKRAGTGCNN 1.2e-025 1.6e-028 -63.99 0.0 146 490 296 555 0.29796 6.7e-031 244 3 M0422_1.02 (ZIC5)_(Mus_musculus)_(DBD_0.99) SYRGGGGGTM 6.0e-003 8.0e-006 -11.74 0.0 233 491 346 590 0.47454 3.3e-008 245 3 M0424_1.02 (SNAI3)_(Mus_musculus)_(DBD_0.75) NNTGACAKNN 3.2e-003 4.2e-006 -12.37 0.0 125 491 212 591 0.25458 1.7e-008 245 3 M0431_1.02 (OSR1)_(Mus_musculus)_(DBD_1.00) MCRGTAGCN 3.0e-003 4.0e-006 -12.42 0.0 356 492 493 600 0.72358 1.6e-008 245 3 M0436_1.02 (ZNF35)_(Mus_musculus)_(DBD_0.96) TTRTTKDHYN 1.9e-167 2.6e-170 -390.49 0.0 57 491 350 579 0.11609 1.1e-172 245 3 M0437_1.02 (ZNF32)_(Mus_musculus)_(DBD_0.99) TATRTATRT 4.2e-129 5.6e-132 -302.21 0.0 46 492 258 475 0.09350 2.3e-134 245 3 M0442_1.02 (ZBTB3)_(Mus_musculus)_(DBD_1.00) NNTGCAGYG 3.2e-028 4.3e-031 -69.92 0.0 206 492 397 599 0.41870 1.7e-033 245 3 M0608_1.02 MLL NNNRSCGNDN 4.8e-001 6.4e-004 -7.36 0.0 355 491 419 517 0.72301 2.6e-006 245 3 M0610_1.02 TET1 NNYRCGYWN 5.3e-002 7.0e-005 -9.57 0.0 350 492 368 451 0.71138 2.9e-007 245 3 M0629_1.02 DMRT3 MATGTATCAAN 4.2e0000 5.6e-003 -5.19 0.0 144 490 181 472 0.29388 2.3e-005 244 3 M0633_1.02 DMRT2 KAATKTATWN 3.8e-180 5.1e-183 -419.74 0.0 45 491 316 526 0.09165 2.1e-185 245 3 M0718_1.02 FOXK1 DNRTMAACAH 1.5e-063 2.0e-066 -151.29 0.0 45 491 208 580 0.09165 8.1e-069 245 3 M0719_1.02 FOXG1 RTAAACAW 5.9e-053 7.8e-056 -126.89 0.0 43 493 180 539 0.08722 3.2e-058 246 3 M0728_1.02 (FOXJ1)_(Mus_musculus)_(DBD_1.00) NRTAAACAAANN 1.7e-122 2.3e-125 -287.01 0.0 41 489 264 568 0.08384 9.3e-128 244 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 1.7e-036 2.3e-039 -88.96 0.0 41 493 158 575 0.08316 9.4e-042 246 3 M0737_1.02 (FOXB2)_(Mus_musculus)_(DBD_0.94) WRWGTAAAYA 1.2e-252 1.6e-255 -586.72 0.0 39 491 368 559 0.07943 6.3e-258 245 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 6.1e-171 8.2e-174 -398.55 0.0 63 491 366 579 0.12831 3.3e-176 245 3 M0893_1.02 ZFHX2 NNTAATTANN 8.1e0000 1.1e-002 -4.53 0.0 399 491 447 509 0.81263 4.4e-005 245 3 M0896_1.02 VENTX TTAATTAG 8.1e-049 1.1e-051 -117.36 0.0 51 493 188 530 0.10345 4.4e-054 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 7.6e-018 1.0e-020 -46.05 0.0 65 491 165 565 0.13238 4.1e-023 245 3 M0906_1.02 (VTN)_(Mus_musculus)_(DBD_0.79) NMTTAATTAR 4.0e-064 5.4e-067 -152.59 0.0 49 491 201 506 0.09980 2.2e-069 245 3 M0943_1.02 (OTP)_(Mus_musculus)_(DBD_1.00) NYTAATTR 5.3e0000 7.0e-003 -4.96 0.0 383 493 430 506 0.77688 2.9e-005 246 3 M0958_1.02 (LHX4)_(Mus_musculus)_(DBD_1.00) BYAATYW 6.7e-001 8.9e-004 -7.03 0.0 392 494 483 557 0.79352 3.6e-006 246 3 M0961_1.02 (BARHL1)_(Mus_musculus)_(DBD_1.00) NTAAWYGNN 9.1e0000 1.2e-002 -4.41 0.0 426 492 514 559 0.86585 5.0e-005 245 3 M1030_1.02 (NKX2-3)_(Mus_musculus)_(DBD_1.00) NVYACTTVD 2.8e0000 3.8e-003 -5.58 0.0 292 492 402 593 0.59350 1.5e-005 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 5.2e-019 7.0e-022 -48.72 0.0 65 491 165 557 0.13238 2.8e-024 245 3 M1359_1.02 (MYPOP)_(Mus_musculus)_(DBD_0.97) NWTTGCGCCR 1.1e-002 1.5e-005 -11.12 0.0 329 491 361 461 0.67006 6.0e-008 245 3 M1418_1.02 C11orf9 TGGTACCA 2.9e0000 3.9e-003 -5.55 0.0 361 493 415 511 0.73225 1.6e-005 246 3 M1528_1.02 (RFX6)_(Mus_musculus)_(DBD_0.66) VCNTRGYWAC 2.8e-008 3.7e-011 -24.02 0.0 133 491 245 597 0.27088 1.5e-013 245 3 M1545_1.02 GMEB1 NNNRCGTNN 6.0e-003 8.0e-006 -11.74 0.0 364 492 401 475 0.73984 3.3e-008 245 3 M1582_1.02 (HMG20B)_(Mus_musculus)_(DBD_0.94) NWAWATAATWN 1.1e-097 1.4e-100 -229.91 0.0 42 490 229 518 0.08571 5.8e-103 244 3 M1583_1.02 (BBX)_(Mus_musculus)_(DBD_0.99) TTCATTGA 1.3e-009 1.8e-012 -27.06 0.0 219 493 301 486 0.44422 7.2e-015 246 3 M1589_1.02 (SOX30)_(Mus_musculus)_(DBD_1.00) NNDNRACAAT 4.4e0000 5.9e-003 -5.13 0.0 423 491 528 575 0.86151 2.4e-005 245 3 M1668_1.02 PRKRIR NCCVNVSKRNNN 1.5e-007 2.1e-010 -22.31 0.0 305 489 451 593 0.62372 8.4e-013 244 3 M1882_1.02 IRF1 AAANNGAAAGTGAAASYRRRN 1.4e-004 1.8e-007 -15.53 0.0 92 480 153 501 0.19167 7.6e-010 239 3 M1884_1.02 MEF2A DKCTAAAAATAGMHH 2.3e-014 3.0e-017 -38.04 0.0 70 486 156 523 0.14403 1.2e-019 242 3 M1906_1.02 SP1 RGGGGMGGGGC 3.3e-001 4.3e-004 -7.74 0.0 290 490 394 574 0.59184 1.8e-006 244 3 M1963_1.02 (ZFY)_(Mus_musculus)_(DBD_0.97) SSSGSCBVGGCCTS 2.3e-004 3.0e-007 -15.02 0.0 289 487 411 576 0.59343 1.2e-009 243 3 M1968_1.02 EBF1 TCCCWGGGGRV 8.7e0000 1.2e-002 -4.46 0.0 282 490 366 556 0.57551 4.8e-005 244 3 M2267_1.02 CDX2 TTTTATKRCHB 1.1e-002 1.4e-005 -11.15 0.0 94 490 147 504 0.19184 5.9e-008 244 3 M2273_1.02 E2F6 RGGCGGGARRV 6.8e-007 9.0e-010 -20.82 0.0 286 490 419 580 0.58367 3.7e-012 244 3 M2275_1.02 ELF1 RRAVCMGGAAGTG 5.3e0000 7.0e-003 -4.96 0.0 252 488 332 551 0.51639 2.9e-005 243 3 M2278_1.02 FOS DVTGASTCATB 5.7e0000 7.5e-003 -4.89 0.0 286 490 330 490 0.58367 3.1e-005 244 3 M2283_1.02 FOXP1 HWWADGTAAACAAAR 2.5e-124 3.3e-127 -291.23 0.0 54 486 297 566 0.11111 1.4e-129 242 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 4.7e-124 6.3e-127 -290.59 0.0 58 488 297 537 0.11885 2.6e-129 243 3 M2292_1.02 JUND DRTGASTCATS 2.9e-001 3.9e-004 -7.85 0.0 322 490 353 466 0.65714 1.6e-006 244 3 M2306_1.02 POU2F2 NDNATTTGCATRW 2.5e0000 3.4e-003 -5.70 0.0 430 488 439 467 0.88115 1.4e-005 243 3 M2307_1.02 PRDM1 DRAAAGTGAAAGTRA 9.8e0000 1.3e-002 -4.34 0.0 118 486 176 557 0.24280 5.4e-005 242 3 M2314_1.02 SP2 SSVVRGRGGCGGGRC 3.6e-004 4.8e-007 -14.54 0.0 338 486 459 570 0.69547 2.0e-009 242 3 M2323_1.02 ZBTB33 SARVTCTCGCGAGAV 2.8e-001 3.7e-004 -7.89 0.0 296 486 270 372 0.60905 1.5e-006 242 3 M2385_1.02 FOXP2 RWGTAAACAVR 1.3e-119 1.7e-122 -280.40 0.0 40 490 254 549 0.08163 6.8e-125 244 3 M2387_1.02 SREBF1 RTGGGGTGAB 5.1e-002 6.8e-005 -9.60 0.0 237 491 324 548 0.48269 2.8e-007 245 3 M2388_1.02 SREBF2 RTGGGGTGAY 2.7e-004 3.6e-007 -14.82 0.0 237 491 326 532 0.48269 1.5e-009 245 3 M4344_1.02 (ARID2)_(Saccharomyces_cerevisiae)_(DBD_0.26) SGTTGCYA 5.2e0000 6.9e-003 -4.97 0.0 221 493 304 569 0.44828 2.8e-005 246 3 M4452_1.02 BATF TYYYRWWATGASTCA 4.6e-019 6.2e-022 -48.84 0.0 80 486 181 518 0.16461 2.5e-024 242 3 M4454_1.02 BRCA1 ARVTCTCGCGAGAVB 5.1e-001 6.8e-004 -7.29 0.0 298 486 198 265 0.61317 2.8e-006 242 3 M4459_1.02 EGR1 SBGCGKGGGCGGVRGSGSGG 2.7e0000 3.5e-003 -5.64 0.0 361 481 436 527 0.75052 1.5e-005 240 3 M4467_1.02 MEF2C DDKCYAAAAATAGMH 4.2e-036 5.6e-039 -88.07 0.0 70 486 208 551 0.14403 2.3e-041 242 3 M4471_1.02 PAX5 BCAGYSRAGCGTGAC 2.3e-004 3.1e-007 -15.00 0.0 174 486 280 583 0.35802 1.3e-009 242 3 M4476_1.02 RFX5 TCABYWGTTGCYRGG 1.9e-002 2.5e-005 -10.58 0.0 314 486 434 580 0.64609 1.0e-007 242 3 M4509_1.02 POU5F1 ATYTGCATRACAAWGRV 6.1e-001 8.1e-004 -7.12 0.0 72 484 102 442 0.14876 3.4e-006 241 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 1.4e-007 1.9e-010 -22.37 0.0 294 486 393 522 0.60494 7.9e-013 242 3 M4537_1.02 E2F4 GGCGGGAARWTBVRR 5.5e-001 7.4e-004 -7.21 0.0 320 486 420 561 0.65844 3.0e-006 242 3 M4551_1.02 ZNF274 YTCAYACTGGAGAGAAA 9.2e-026 1.2e-028 -64.27 0.0 148 484 198 318 0.30579 5.1e-031 241 3 M4565_1.02 FOSL2 VDGGATGASTCAYH 2.6e-004 3.5e-007 -14.88 0.0 319 487 385 494 0.65503 1.4e-009 243 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 3.0e-165 4.1e-168 -385.44 0.0 56 486 340 559 0.11523 1.7e-170 242 3 M4572_1.02 MAFF TGCTGACTCAGCAWW 2.7e-010 3.7e-013 -28.64 0.0 286 486 351 459 0.58848 1.5e-015 242 3 M4604_1.02 ZNF263 RRGGAGGASGVVGRGGRGGRG 2.1e-001 2.8e-004 -8.17 0.0 298 480 406 567 0.62083 1.2e-006 239 3 M4612_1.02 CTCFL CCRSCAGGGGGCGCY 1.7e-005 2.3e-008 -17.60 0.0 234 486 300 478 0.48148 9.4e-011 242 3 M4619_1.02 FOSL1 BGGTGASTCAK 7.4e-004 9.9e-007 -13.83 0.0 322 490 372 477 0.65714 4.0e-009 244 3 M4623_1.02 JUNB NDRTGASTCATNYHY 4.5e0000 5.9e-003 -5.13 0.0 330 486 384 503 0.67901 2.5e-005 242 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 4.1e-007 5.5e-010 -21.32 0.0 280 484 322 435 0.57851 2.3e-012 241 3 M4636_1.02 THAP1 YTGCCCDBANYMAAGATGGCG 3.4e-002 4.5e-005 -10.01 0.0 198 480 168 300 0.41250 1.9e-007 239 3 M4681_1.02 BACH2 TGCTGAGTCA 4.5e-011 5.9e-014 -30.46 0.0 291 491 371 483 0.59267 2.4e-016 245 3 M4692_1.02 SIX5 ACTACAAYTC 5.1e-002 6.8e-005 -9.60 0.0 95 491 137 472 0.19348 2.8e-007 245 3 M4698_1.02 HNF4A BTGRMCTTTGVHCYB 2.4e-008 3.2e-011 -24.16 0.0 150 486 260 572 0.30864 1.3e-013 242 3 M4708_1.02 TBP TATGCAAATA 2.1e-002 2.8e-005 -10.49 0.0 427 491 498 530 0.86965 1.1e-007 245 3 M5284_1.02 ALX3 BNTAATTRGY 2.8e0000 3.8e-003 -5.58 0.0 415 491 486 535 0.84521 1.5e-005 245 3 M5287_1.02 ALX4 HTAATYNAATTAN 7.2e-250 9.6e-253 -580.29 0.0 46 488 369 512 0.09426 4.0e-255 243 3 M5291_1.02 ARX YTAATTNRATTAN 3.5e-293 4.7e-296 -680.01 0.0 46 488 393 497 0.09426 1.9e-298 243 3 M5294_1.02 BARHL2 NHTAAAYGNY 4.8e-041 6.4e-044 -99.47 0.0 49 491 180 564 0.09980 2.6e-046 245 3 M5300_1.02 BARX1 TAATBGNTWTTTAATBG 2.3e-025 3.1e-028 -63.34 0.0 68 484 153 417 0.14050 1.3e-030 241 3 M5322_1.02 CPEB1 YTTTTATT 1.4e-044 1.9e-047 -107.60 0.0 53 493 192 562 0.10751 7.6e-050 246 3 M5335_1.02 CUX2 ATCGATAHNDTTATYGAT 1.3e-361 1.8e-364 -837.55 0.0 41 483 400 448 0.08489 7.5e-367 241 3 M5339_1.02 DLX1 NNTAATTRNN 1.4e-002 1.8e-005 -10.92 0.0 415 491 503 546 0.84521 7.4e-008 245 3 M5348_1.02 DRGX NTAATYHAATTAN 1.7e-184 2.3e-187 -429.75 0.0 46 488 315 500 0.09426 9.5e-190 243 3 M5377_1.02 ELF4 AACCCGGAAGTR 1.9e-003 2.5e-006 -12.91 0.0 265 489 279 410 0.54192 1.0e-008 244 3 M5390_1.02 EN1 VBTAATTRSB 4.1e0000 5.5e-003 -5.21 0.0 375 491 449 536 0.76375 2.2e-005 245 3 M5414_1.02 ESX1 DNTAATTRRN 1.5e0000 2.0e-003 -6.20 0.0 413 491 500 553 0.84114 8.3e-006 245 3 M5425_1.02 ETV6 CCGGAASCGGAAGYR 6.3e-008 8.4e-011 -23.20 0.0 272 486 282 381 0.55967 3.5e-013 242 3 M5427_1.02 EVX1 SNTAATYABB 5.9e-001 7.8e-004 -7.15 0.0 417 491 503 550 0.84929 3.2e-006 245 3 M5428_1.02 EVX2 NNTAATKABB 7.7e0000 1.0e-002 -4.57 0.0 401 491 482 548 0.81670 4.2e-005 245 3 M5435_1.02 FOXB1 TCGCYGTGTCATTC 6.2e-004 8.3e-007 -14.00 0.0 145 487 182 420 0.29774 3.4e-009 243 3 M5445_1.02 FOXD2 DRTMAATATTWDYD 1.3e-026 1.7e-029 -66.26 0.0 53 487 148 482 0.10883 6.9e-032 243 3 M5446_1.02 FOXD4L2 RTAAACA 2.5e-152 3.4e-155 -355.68 0.0 44 494 304 584 0.08907 1.4e-157 246 3 M5460_1.02 FOXL1 RTAAACA 2.4e-212 3.1e-215 -493.91 0.0 44 494 352 565 0.08907 1.3e-217 246 3 M5481_1.02 GBX2 NYTAATTRSB 7.6e0000 1.0e-002 -4.60 0.0 401 491 471 535 0.81670 4.1e-005 245 3 M5493_1.02 GMEB2 KTRCGTAA 1.7e0000 2.3e-003 -6.08 0.0 367 493 338 405 0.74442 9.3e-006 246 3 M5504_1.02 HES5 YGGCACGTGYCR 4.0e0000 5.3e-003 -5.24 0.0 377 489 255 294 0.77096 2.2e-005 244 3 M5509_1.02 HEY1 GRCACGTGBC 3.1e-002 4.1e-005 -10.09 0.0 383 491 402 460 0.78004 1.7e-007 245 3 M5544_1.02 HOXC10 DTTTWATKDB 4.3e-053 5.7e-056 -127.21 0.0 63 491 225 563 0.12831 2.3e-058 245 3 M5547_1.02 HOXC11 DGTCRTWAAAH 1.6e-002 2.2e-005 -10.74 0.0 76 490 117 467 0.15510 8.9e-008 244 3 M5551_1.02 HOXC12 TTTTATTRC 1.5e-001 2.0e-004 -8.54 0.0 56 492 104 564 0.11382 8.0e-007 245 3 M5553_1.02 HOXC13 CYAATAAAAH 4.1e-004 5.5e-007 -14.41 0.0 63 491 122 555 0.12831 2.2e-009 245 3 M5555_1.02 HOXD11 RTCGTAAAAH 3.7e-009 5.0e-012 -26.02 0.0 67 491 128 476 0.13646 2.0e-014 245 3 M5557_1.02 HOXD12 GTAATAAAA 7.6e-001 1.0e-003 -6.89 0.0 428 492 526 566 0.86992 4.2e-006 245 3 M5563_1.02 HOXD8 VHWAATTADV 1.3e-002 1.7e-005 -11.00 0.0 421 491 527 567 0.85743 6.8e-008 245 3 M5584_1.02 ISX YTAATCTAATTAR 8.2e-239 1.1e-241 -554.84 0.0 46 488 350 482 0.09426 4.5e-244 243 3 M5602_1.02 LHX9 YTAATTRN 4.2e0000 5.6e-003 -5.19 0.0 427 493 497 539 0.86613 2.3e-005 246 3 M5604_1.02 LMX1A YTAATTAA 1.8e-042 2.3e-045 -102.76 0.0 51 493 178 526 0.10345 9.5e-048 246 3 M5605_1.02 LMX1B TTAATTRN 1.7e-050 2.3e-053 -121.21 0.0 51 493 196 553 0.10345 9.3e-056 246 3 M5616_1.02 MEF2B RCTAWAAATAGM 7.5e-004 1.0e-006 -13.82 0.0 431 489 426 443 0.88139 4.1e-009 244 3 M5621_1.02 MEIS3 SCTGTCAH 2.1e-004 2.7e-007 -15.11 0.0 125 493 215 588 0.25355 1.1e-009 246 3 M5628_1.02 MGA AGGTGTGA 3.3e0000 4.4e-003 -5.42 0.0 365 493 469 576 0.74037 1.8e-005 246 3 M5631_1.02 MIXL1 NBTAATTRVN 8.2e-001 1.1e-003 -6.82 0.0 399 491 480 543 0.81263 4.5e-006 245 3 M5635_1.02 MNX1 TTTAATTRNH 1.5e-043 2.0e-046 -105.21 0.0 49 491 182 552 0.09980 8.3e-049 245 3 M5637_1.02 MSX1 TAATTGSWWTTTAATTGS 3.0e-089 4.0e-092 -210.44 0.0 55 483 237 478 0.11387 1.7e-094 241 3 M5660_1.02 NFIA TTGGCANNDTGCCAR 2.1e0000 2.8e-003 -5.89 0.0 186 486 155 308 0.38272 1.1e-005 242 3 M5697_1.02 ONECUT3 DTTATYGATTTTTY 1.9e-262 2.5e-265 -609.26 0.0 59 487 400 497 0.12115 1.0e-267 243 3 M5702_1.02 PAX1 DKCABTCAWGCGTGACG 2.0e0000 2.7e-003 -5.92 0.0 410 484 261 280 0.84711 1.1e-005 241 3 M5704_1.02 PAX3 TAATYRATTA 1.0e-002 1.4e-005 -11.20 0.0 59 491 65 271 0.12016 5.6e-008 245 3 M5709_1.02 PAX7 WAATYRATTA 1.9e-001 2.6e-004 -8.27 0.0 59 491 75 357 0.12016 1.0e-006 245 3 M5711_1.02 PAX9 KKCASTCAWGCGTGACS 4.2e-008 5.6e-011 -23.61 0.0 186 484 151 246 0.38430 2.3e-013 241 3 M5714_1.02 PHOX2A TAATYYAATTA 1.2e-149 1.7e-152 -349.49 0.0 46 490 286 507 0.09388 6.8e-155 244 3 M5715_1.02 PHOX2B TAATYYAATTA 2.6e-140 3.4e-143 -328.04 0.0 46 490 277 506 0.09388 1.4e-145 244 3 M5735_1.02 POU3F3 WAATTWGCATAWW 4.0e-001 5.3e-004 -7.53 0.0 64 488 97 464 0.13115 2.2e-006 243 3 M5740_1.02 POU4F1 ATGMATAATTAATG 6.1e-289 8.2e-292 -670.26 0.0 39 487 374 499 0.08008 3.4e-294 243 3 M5743_1.02 POU4F3 RTGMATWATTAATGAV 7.8e-283 1.0e-285 -656.20 0.0 41 485 374 495 0.08454 4.3e-288 242 3 M5753_1.02 PROX1 YAAGACGYCTTA 1.5e-012 2.0e-015 -33.86 0.0 91 489 120 299 0.18609 8.1e-018 244 3 M5772_1.02 RAX2 BTAATTRR 7.5e0000 1.0e-002 -4.60 0.0 375 493 454 547 0.76065 4.1e-005 246 3 M5777_1.02 RFX4 NGTWRCCATGGYWACS 4.1e-002 5.5e-005 -9.82 0.0 341 485 353 435 0.70309 2.3e-007 242 3 M5807_1.02 SHOX2 YTAATTRR 2.7e0000 3.6e-003 -5.62 0.0 375 493 453 543 0.76065 1.5e-005 246 3 M5856_1.02 SP8 RGKGGGCGTGKY 3.1e0000 4.1e-003 -5.50 0.0 379 489 482 570 0.77505 1.7e-005 244 3 M5883_1.02 TBX20 TCACACSTTCACACCT 5.8e-001 7.7e-004 -7.17 0.0 163 485 164 363 0.33608 3.2e-006 242 3 M5896_1.02 TBX4 AGGTGTGA 9.2e-001 1.2e-003 -6.70 0.0 385 493 498 583 0.78093 5.0e-006 246 3 M5941_1.02 UNCX NTAATYBAATTAN 4.1e-123 5.5e-126 -288.43 0.0 46 488 266 525 0.09426 2.2e-128 243 3 M5972_1.02 ZNF410 GANTATTATGGGATGKM 1.8e-003 2.4e-006 -12.93 0.0 84 484 47 119 0.17355 1.0e-008 241 3 M5974_1.02 ZNF524 GGGTTCRAGGGT 8.8e-001 1.2e-003 -6.75 0.0 239 489 277 468 0.48875 4.8e-006 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 1.7e-190 2.2e-193 -443.59 0.0 63 491 375 555 0.12831 9.1e-196 245 3 M6115_1.02 TP73 CATGYCWGRRCHTGY 2.4e-002 3.2e-005 -10.36 0.0 290 486 401 572 0.59671 1.3e-007 242 3 M6139_1.02 AHR KCACGCRAH 5.3e-006 7.0e-009 -18.77 0.0 376 492 490 560 0.76423 2.9e-011 245 3 M6141_1.02 ALX1 TAATBYAATTAB 3.9e-068 5.2e-071 -161.83 0.0 45 489 202 525 0.09202 2.1e-073 244 3 M6144_1.02 TFAP2B BCCCBCRGGC 1.3e-005 1.8e-008 -17.84 0.0 283 491 412 584 0.57637 7.3e-011 245 3 M6146_1.02 TFAP2D ACGNGCCBCRGGCK 1.7e-008 2.3e-011 -24.49 0.0 289 487 383 511 0.59343 9.6e-014 243 3 M6147_1.02 ARID3A TWWAWTTTGATWYYVWTTAATH 3.7e-267 4.9e-270 -620.10 0.0 49 479 381 489 0.10230 2.1e-272 239 3 M6150_1.02 ARNT2 GYSYSCCACGNC 3.3e-003 4.4e-006 -12.33 0.0 365 489 490 582 0.74642 1.8e-008 244 3 M6157_1.02 BARX2 TYRWTAATKR 5.1e-007 6.8e-010 -21.11 0.0 63 491 127 533 0.12831 2.8e-012 245 3 M6161_1.02 BHLHE41 WSVRKSYCACGTGMWGRRRV 6.2e-001 8.3e-004 -7.10 0.0 283 481 374 548 0.58836 3.5e-006 240 3 M6163_1.02 BPTF KKTBTTGTKKKS 6.9e0000 9.2e-003 -4.69 0.0 407 489 524 588 0.83231 3.8e-005 244 3 M6187_1.02 DDIT3 GGGGATTGCABBB 7.5e-011 9.9e-014 -29.94 0.0 226 488 364 576 0.46311 4.1e-016 243 3 M6211_1.02 EOMES CGGGGATACGAAAT 6.3e-005 8.3e-008 -16.30 0.0 211 487 124 188 0.43326 3.4e-010 243 3 M6221_1.02 ETS2 VMVGGAAGTKS 1.9e-006 2.5e-009 -19.81 0.0 242 490 374 592 0.49388 1.0e-011 244 3 M6225_1.02 MECOM WAGAYAAGATAANAKW 2.4e0000 3.2e-003 -5.75 0.0 375 485 374 437 0.77320 1.3e-005 242 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 8.4e-232 1.1e-234 -538.69 0.0 58 488 403 564 0.11885 4.6e-237 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 1.0e-125 1.4e-128 -294.41 0.0 54 486 287 524 0.11111 5.7e-131 242 3 M6236_1.02 FOXC2 YCTRDSWAAACAAAC 8.9e-005 1.2e-007 -15.94 0.0 424 486 479 502 0.87243 4.9e-010 242 3 M6237_1.02 FOXD3 AAACAAACA 3.7e-192 4.9e-195 -447.41 0.0 46 492 338 555 0.09350 2.0e-197 245 3 M6238_1.02 FOXF1 WAAATAAACAW 3.9e-234 5.2e-237 -544.06 0.0 62 490 399 531 0.12653 2.1e-239 244 3 M6239_1.02 FOXF2 HWADGTAAACA 3.2e-193 4.3e-196 -449.85 0.0 58 490 363 543 0.11837 1.8e-198 244 3 M6241_1.02 FOXJ2 WAAAYAAAYA 4.0e-302 5.3e-305 -700.62 0.0 39 491 396 539 0.07943 2.2e-307 245 3 M6242_1.02 FOXJ3 TAAACAWWAAMMA 1.5e-143 2.0e-146 -335.49 0.0 46 488 283 515 0.09426 8.2e-149 243 3 M6244_1.02 FOXM1 RWAAWCAMWCAAV 4.5e-162 6.0e-165 -378.13 0.0 56 488 343 577 0.11475 2.5e-167 243 3 M6245_1.02 FOXO1 AAAWWVWAAACAAVHH 1.6e-183 2.1e-186 -427.55 0.0 49 485 341 560 0.10103 8.5e-189 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 1.1e-202 1.5e-205 -471.63 0.0 42 488 342 572 0.08607 6.1e-208 243 3 M6247_1.02 FOXO4 MRTAAACAA 4.3e-086 5.7e-089 -203.19 0.0 46 492 236 570 0.09350 2.3e-091 245 3 M6249_1.02 FOXP3 AAWCAMATT 1.8e-001 2.3e-004 -8.36 0.0 388 492 487 562 0.78862 9.5e-007 245 3 M6250_1.02 FOXQ1 AAATAAACAATD 1.7e-173 2.3e-176 -404.42 0.0 55 489 328 508 0.11247 9.5e-179 244 3 M6251_1.02 FUBP1 TYGTNTTTTTTT 2.9e-002 3.9e-005 -10.15 0.0 405 489 526 582 0.82822 1.6e-007 244 3 M6257_1.02 GATA5 WVANWGATAABTYRRHK 1.5e-009 2.0e-012 -26.92 0.0 68 484 145 543 0.14050 8.5e-015 241 3 M6262_1.02 GFI1B WGCMGTGATTT 1.4e-001 1.9e-004 -8.57 0.0 304 490 400 557 0.62041 7.8e-007 244 3 M6263_1.02 GFI1 RCWSTGATTT 4.2e-001 5.5e-004 -7.50 0.0 307 491 413 576 0.62525 2.3e-006 245 3 M6269_1.02 HBP1 AYYCATTGA 1.8e-022 2.4e-025 -56.68 0.0 48 492 144 556 0.09756 9.9e-028 245 3 M6271_1.02 HES1 KGKCKCGTGBCKB 4.6e0000 6.2e-003 -5.09 0.0 342 488 451 580 0.70082 2.5e-005 243 3 M6276_1.02 HINFP DMSHHMGCGGACGTTV 1.9e-008 2.5e-011 -24.40 0.0 229 485 255 387 0.47216 1.0e-013 242 3 M6279_1.02 HMGA1 AAAATWN 3.3e-001 4.3e-004 -7.74 0.0 412 494 513 568 0.83401 1.8e-006 246 3 M6281_1.02 HNF1A KGKTAAWBATTAACY 2.3e-018 3.1e-021 -47.22 0.0 38 486 113 513 0.07819 1.3e-023 242 3 M6282_1.02 HNF1B GTTAAWYATTAACY 6.9e-019 9.2e-022 -48.44 0.0 47 487 131 528 0.09651 3.8e-024 243 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 2.1e-255 2.8e-258 -593.04 0.0 59 487 405 519 0.12115 1.1e-260 243 3 M6289_1.02 HOXA9 WCATAAAYYRTH 4.1e-082 5.5e-085 -194.02 0.0 53 489 238 531 0.10838 2.2e-087 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 7.0e-006 9.3e-009 -18.49 0.0 52 490 110 545 0.10612 3.8e-011 244 3 M6292_1.02 HOXA5 CATTAATYAR 1.2e-026 1.7e-029 -66.27 0.0 53 491 157 534 0.10794 6.8e-032 245 3 M6293_1.02 HOXA7 KCCAATCKATYGAKB 1.1e0000 1.5e-003 -6.49 0.0 264 486 361 568 0.54321 6.3e-006 242 3 M6296_1.02 HOXB6 KKCATMAATCAWT 2.3e-097 3.1e-100 -229.13 0.0 52 488 245 500 0.10656 1.3e-102 243 3 M6297_1.02 HOXB7 MATYAATCAA 6.6e-210 8.9e-213 -488.27 0.0 43 491 330 507 0.08758 3.6e-215 245 3 M6298_1.02 HOXB8 BMATTAATCAA 2.6e-171 3.5e-174 -399.40 0.0 44 490 300 503 0.08980 1.4e-176 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 2.0e-308 2.6e-311 -715.13 0.0 52 486 402 467 0.10700 1.1e-313 242 3 M6301_1.02 HOXD10 AATTAAARCA 2.6e-032 3.5e-035 -79.34 0.0 67 491 194 551 0.13646 1.4e-037 245 3 M6302_1.02 HOXD13 TCYCTAATAAA 7.2e-001 9.5e-004 -6.96 0.0 436 490 543 575 0.88980 3.9e-006 244 3 M6304_1.02 HOXD9 HMATNAAWYT 1.2e-017 1.5e-020 -45.62 0.0 57 491 146 535 0.11609 6.3e-023 245 3 M6312_1.02 IRF7 GAAASYGAAA 2.8e-005 3.7e-008 -17.12 0.0 91 491 172 584 0.18534 1.5e-010 245 3 M6316_1.02 TCF4 VCAGGTGYD 9.2e0000 1.2e-002 -4.40 0.0 384 492 462 545 0.78049 5.0e-005 245 3 M6321_1.02 KLF15 RSMKGGGAGDKGGGGSS 1.9e0000 2.5e-003 -5.99 0.0 346 484 454 572 0.71488 1.0e-005 241 3 M6322_1.02 KLF1 CAGGGTGKGGC 2.7e0000 3.6e-003 -5.64 0.0 350 490 454 573 0.71429 1.5e-005 244 3 M6329_1.02 LHX3 AAAATTAATTARY 7.7e-168 1.0e-170 -391.41 0.0 60 488 324 482 0.12295 4.2e-173 243 3 M6330_1.02 MAFA BTGCTGACBMYGCARYHTYCV 1.0e-003 1.3e-006 -13.53 0.0 288 480 417 583 0.60000 5.5e-009 239 3 M6336_1.02 MAZ RGGGDRGGGAGGGRGGG 2.8e0000 3.8e-003 -5.58 0.0 286 484 390 577 0.59091 1.6e-005 241 3 M6342_1.02 MEF2D BCTAWAAATAGC 3.9e-004 5.2e-007 -14.48 0.0 63 489 116 519 0.12883 2.1e-009 244 3 M6348_1.02 MTF1 MGKGCCGTGYGCAAADS 1.2e-023 1.6e-026 -59.42 0.0 146 484 260 473 0.30165 6.5e-029 241 3 M6360_1.02 NFE2L2 VRTGACTCAGCA 4.1e-004 5.5e-007 -14.42 0.0 291 489 418 587 0.59509 2.2e-009 244 3 M6374_1.02 NKX2-1 STCAAGKGCH 9.6e-006 1.3e-008 -18.17 0.0 145 491 252 598 0.29532 5.2e-011 245 3 M6378_1.02 NKX3-1 WWTAAGTATWTWW 4.7e-321 6.3e-324 -744.20 0.0 40 488 397 501 0.08197 2.6e-326 243 3 M6387_1.02 NR1I3 HTGAACTYBBYTGACCYY 7.0e0000 9.3e-003 -4.67 0.0 243 483 313 530 0.50311 3.9e-005 241 3 M6391_1.02 NR2E3 TGACTTTTGACTTT 5.4e0000 7.2e-003 -4.94 0.0 407 487 488 544 0.83573 3.0e-005 243 3 M6399_1.02 ONECUT2 DKSWTKWTATKGATTTTWYYT 4.6e-301 6.2e-304 -698.17 0.0 48 480 399 485 0.10000 2.6e-306 239 3 M6400_1.02 OTX1 BTAAKCCT 5.7e-002 7.6e-005 -9.49 0.0 373 493 482 572 0.75659 3.1e-007 246 3 M6401_1.02 OTX2 HYYTAATCCBWKHDM 1.3e0000 1.7e-003 -6.38 0.0 358 486 444 543 0.73663 7.0e-006 242 3 M6406_1.02 PAX2 RHTCAGTSAYGMGTGAYW 1.6e0000 2.2e-003 -6.12 0.0 363 483 462 558 0.75155 9.1e-006 241 3 M6411_1.02 PAX8 BTVAYTSRMGYRKR 9.6e0000 1.3e-002 -4.36 0.0 335 487 449 590 0.68789 5.3e-005 243 3 M6412_1.02 PBX1 VHMATCAATCAAWTH 1.1e-010 1.5e-013 -29.53 0.0 60 486 139 558 0.12346 6.2e-016 242 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 2.3e-130 3.0e-133 -305.14 0.0 46 486 286 569 0.09465 1.3e-135 242 3 M6417_1.02 POU1F1 RWATATTCATKAR 2.2e-091 2.9e-094 -215.39 0.0 44 488 231 537 0.09016 1.2e-096 243 3 M6418_1.02 PITX2 DBTAATCCMA 6.8e-001 9.1e-004 -7.01 0.0 331 491 439 577 0.67413 3.7e-006 245 3 M6423_1.02 POU2F1 ATTTGCATD 9.7e0000 1.3e-002 -4.35 0.0 440 492 522 554 0.89431 5.3e-005 245 3 M6426_1.02 POU3F2 CATRAATWWT 3.7e-223 4.9e-226 -518.79 0.0 43 491 351 542 0.08758 2.0e-228 245 3 M6427_1.02 POU4F2 MARCTCATTAATR 1.5e-001 2.0e-004 -8.54 0.0 58 488 89 447 0.11885 8.0e-007 243 3 M6429_1.02 POU6F1 CATAAWTTATGCR 5.2e-007 7.0e-010 -21.08 0.0 50 488 86 382 0.10246 2.9e-012 243 3 M6438_1.02 PROP1 RASHAATTAAHWTVR 1.2e-060 1.6e-063 -144.60 0.0 64 486 229 524 0.13169 6.6e-066 242 3 M6440_1.02 PRRX2 YTAATTR 1.9e0000 2.5e-003 -6.00 0.0 416 494 478 527 0.84211 1.0e-005 246 3 M6442_1.02 PURA CCMBGCCCNCCMMYWCC 3.3e-003 4.4e-006 -12.33 0.0 320 484 447 583 0.66116 1.8e-008 241 3 M6465_1.02 SMAD3 STGTCTGBCY 9.5e0000 1.3e-002 -4.37 0.0 129 491 200 595 0.26273 5.2e-005 245 3 M6471_1.02 SOX13 YATTGTTY 2.1e-006 2.8e-009 -19.68 0.0 53 493 116 566 0.10751 1.2e-011 246 3 M6482_1.02 SP3 VGVVGGGGGCGGGGCBRGSS 4.7e-001 6.2e-004 -7.39 0.0 347 481 454 563 0.72141 2.6e-006 240 3 M6490_1.02 SRY DAAACAAWR 3.1e0000 4.2e-003 -5.48 0.0 412 492 508 565 0.83740 1.7e-005 245 3 M6505_1.02 TBX5 AGGTGTGA 9.8e0000 1.3e-002 -4.34 0.0 355 493 470 594 0.72008 5.3e-005 246 3 M6509_1.02 TEAD4 AAAAAYAKCYCT 3.3e-003 4.4e-006 -12.34 0.0 67 489 121 533 0.13701 1.8e-008 244 3 M6510_1.02 TEF TGTTTATRTAAMTK 3.9e-101 5.2e-104 -237.83 0.0 63 487 285 546 0.12936 2.1e-106 243 3 M6534_1.02 VSX2 WDAGCTAATTA 5.7e-003 7.6e-006 -11.79 0.0 386 490 419 474 0.78776 3.1e-008 244 3 M6542_1.02 ZBTB6 VGRTGATRGAGCC 1.2e-002 1.6e-005 -11.04 0.0 202 488 289 549 0.41393 6.6e-008 243 3 M6546_1.02 ZFHX3 ATTAWTAATTA 2.7e-280 3.6e-283 -650.34 0.0 44 490 374 485 0.08980 1.5e-285 244 3 M6547_1.02 ZFX SVGSSSSSCAGGCCBVGSC 3.8e-002 5.1e-005 -9.88 0.0 352 482 469 571 0.73029 2.1e-007 240 3 M6552_1.02 ZNF148 KGVGKGGGGGAGGGG 8.8e-001 1.2e-003 -6.75 0.0 362 486 455 551 0.74486 4.9e-006 242 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).