Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
CAGYRGG | 7 | CAGCAGG |
DTAAA | 5 | ATAAA |
GGRAA | 5 | GGGAA |
CCTGGKGA | 8 | CCTGGGGA |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.212 C 0.288 G 0.288 T 0.212
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
CCTGGKGA | DREME-4 | chr19 | + | 867511 | 867518 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr16 | - | 1070032 | 1070039 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr6 | - | 1388232 | 1388239 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr16 | + | 1408547 | 1408554 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 1907528 | 1907535 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr16 | - | 2148033 | 2148040 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 3403151 | 3403158 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr4 | - | 3837060 | 3837067 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 3890300 | 3890307 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr5 | - | 5332325 | 5332332 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr5 | - | 5340474 | 5340481 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 6331804 | 6331811 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 9145182 | 9145189 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr18 | + | 11850006 | 11850013 | 2.57e-05 | 0.148 | cctgggga |
CCTGGKGA | DREME-4 | chr1 | + | 11944570 | 11944577 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr3 | + | 13400337 | 13400344 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr3 | - | 13400471 | 13400478 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr3 | + | 14439979 | 14439986 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 16146596 | 16146603 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | - | 16929717 | 16929724 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 16929869 | 16929876 | 2.57e-05 | 0.148 | cctgggga |
CCTGGKGA | DREME-4 | chr22 | - | 17171241 | 17171248 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr22 | - | 17266886 | 17266893 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr5 | - | 17306575 | 17306582 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr19 | + | 18451213 | 18451220 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 21286396 | 21286403 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr13 | - | 21812325 | 21812332 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr22 | - | 29267046 | 29267053 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 29597812 | 29597819 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr22 | - | 29702414 | 29702421 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr22 | + | 29702496 | 29702503 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 32818102 | 32818109 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr19 | - | 33268581 | 33268588 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr19 | - | 33803115 | 33803122 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 34756842 | 34756849 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr19 | + | 35049164 | 35049171 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | - | 39231256 | 39231263 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr13 | + | 39768282 | 39768289 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr19 | - | 41931489 | 41931496 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr22 | - | 43290538 | 43290545 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr6 | + | 43824086 | 43824093 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr20 | + | 44598697 | 44598704 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 47884281 | 47884288 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr14 | - | 50000556 | 50000563 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr7 | - | 50963113 | 50963120 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr13 | + | 51148609 | 51148616 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr20 | + | 57124834 | 57124841 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr20 | - | 57125028 | 57125035 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr20 | - | 57198459 | 57198466 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr10 | - | 58967663 | 58967670 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr20 | + | 63224968 | 63224975 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr20 | + | 63626393 | 63626400 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr20 | + | 63626437 | 63626444 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr15 | - | 70120351 | 70120358 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr15 | - | 70495470 | 70495477 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 72420051 | 72420058 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | - | 73639251 | 73639258 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 76029446 | 76029453 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 76547318 | 76547325 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 76547595 | 76547602 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr17 | + | 77365806 | 77365813 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | - | 77379050 | 77379057 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr10 | + | 79346586 | 79346593 | 2.57e-05 | 0.148 | cctgggga |
CCTGGKGA | DREME-4 | chr10 | + | 79346847 | 79346854 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr16 | + | 85397732 | 85397739 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr16 | - | 85523782 | 85523789 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr14 | - | 93825202 | 93825209 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr9 | - | 98172673 | 98172680 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr14 | + | 100473477 | 100473484 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr15 | - | 101121965 | 101121972 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr14 | + | 105165430 | 105165437 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr14 | - | 105213135 | 105213142 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr14 | - | 105213319 | 105213326 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr14 | - | 105470950 | 105470957 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr12 | - | 108131639 | 108131646 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr12 | + | 108584188 | 108584195 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr12 | - | 111409862 | 111409869 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr12 | - | 111410097 | 111410104 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 119327846 | 119327853 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr12 | - | 124481579 | 124481586 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr12 | - | 131313706 | 131313713 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr7 | - | 131897390 | 131897397 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr12 | + | 132316828 | 132316835 | 2.57e-05 | 0.148 | cctgggga |
CCTGGKGA | DREME-4 | chr3 | + | 135456361 | 135456368 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr9 | - | 136143682 | 136143689 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr5 | - | 142432561 | 142432568 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr8 | + | 143499741 | 143499748 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr8 | - | 143499809 | 143499816 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr5 | - | 149805901 | 149805908 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr5 | - | 150511580 | 150511587 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr5 | + | 151961696 | 151961703 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 155244662 | 155244669 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr5 | - | 169081035 | 169081042 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | - | 203153697 | 203153704 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | - | 226428853 | 226428860 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | - | 227794215 | 227794222 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 231596436 | 231596443 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | - | 231596687 | 231596694 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr2 | + | 241505365 | 241505372 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 243114125 | 243114132 | 2.57e-05 | 0.148 | CCTGGGGA |
CCTGGKGA | DREME-4 | chr1 | + | 6331972 | 6331979 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr8 | + | 11677083 | 11677090 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr10 | + | 13505244 | 13505251 | 4.46e-05 | 0.186 | cctggtga |
CCTGGKGA | DREME-4 | chr19 | + | 13616101 | 13616108 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr17 | - | 17922994 | 17923001 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr1 | + | 18938852 | 18938859 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr22 | + | 19975164 | 19975171 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr17 | - | 21286201 | 21286208 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr17 | + | 21723245 | 21723252 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr13 | + | 21812673 | 21812680 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr20 | + | 23325345 | 23325352 | 4.46e-05 | 0.186 | CCtggtga |
CCTGGKGA | DREME-4 | chr17 | - | 34756926 | 34756933 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr22 | + | 36586016 | 36586023 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr22 | + | 37340507 | 37340514 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr8 | + | 38567336 | 38567343 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr6 | - | 39060004 | 39060011 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr8 | + | 41882221 | 41882228 | 4.46e-05 | 0.186 | cctggtga |
CCTGGKGA | DREME-4 | chr21 | - | 45781032 | 45781039 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr22 | - | 46774026 | 46774033 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr17 | - | 48504029 | 48504036 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr17 | + | 50178547 | 50178554 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr15 | - | 65954584 | 65954591 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr15 | - | 70495375 | 70495382 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr17 | - | 74245540 | 74245547 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr17 | + | 76547368 | 76547375 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr15 | - | 78395525 | 78395532 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr1 | + | 91428571 | 91428578 | 4.46e-05 | 0.186 | cctggtga |
CCTGGKGA | DREME-4 | chr14 | + | 93892197 | 93892204 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr14 | - | 99606483 | 99606490 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr12 | - | 108131836 | 108131843 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr12 | - | 117086921 | 117086928 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr11 | - | 119992698 | 119992705 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr2 | + | 120826032 | 120826039 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr9 | + | 121453668 | 121453675 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr9 | + | 121453701 | 121453708 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr6 | - | 154615720 | 154615727 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr1 | + | 229694613 | 229694620 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr1 | - | 233113136 | 233113143 | 4.46e-05 | 0.186 | CCTGGTGA |
CCTGGKGA | DREME-4 | chr16 | - | 67386 | 67393 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | - | 3890394 | 3890401 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr16 | - | 4529412 | 4529419 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr1 | - | 6199292 | 6199299 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | - | 21723447 | 21723454 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr22 | - | 23431529 | 23431536 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr2 | - | 24833156 | 24833163 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr22 | - | 25942990 | 25942997 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr8 | - | 29126772 | 29126779 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr1 | - | 32817757 | 32817764 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr20 | - | 32894152 | 32894159 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr6 | - | 33280106 | 33280113 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr6 | - | 33280229 | 33280236 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr6 | - | 33280329 | 33280336 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr19 | - | 33414183 | 33414190 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr19 | - | 37988854 | 37988861 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr19 | - | 40921571 | 40921578 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | - | 41124067 | 41124074 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | - | 43656916 | 43656923 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr6 | - | 43707883 | 43707890 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr6 | - | 43762388 | 43762395 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | - | 44767944 | 44767951 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr13 | - | 51263165 | 51263172 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr15 | - | 69826287 | 69826294 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr3 | - | 72316626 | 72316633 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr15 | - | 78212955 | 78212962 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr10 | - | 78377500 | 78377507 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr10 | - | 79256718 | 79256725 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr15 | - | 101121750 | 101121757 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr9 | - | 114460795 | 114460802 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr7 | - | 131897339 | 131897346 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr7 | - | 131897531 | 131897538 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr12 | - | 132400916 | 132400923 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr6 | - | 148747793 | 148747800 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr6 | - | 158031478 | 158031485 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr1 | - | 206909817 | 206909824 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr1 | - | 223023014 | 223023021 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | + | 1121402 | 1121409 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr19 | + | 1155084 | 1155091 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr17 | + | 1316036 | 1316043 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | + | 1770083 | 1770090 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr1 | + | 2556673 | 2556680 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr1 | + | 2556695 | 2556702 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr7 | + | 2856619 | 2856626 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | + | 3890148 | 3890155 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr12 | + | 6946537 | 6946544 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | + | 9144912 | 9144919 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr11 | + | 12066866 | 12066873 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr1 | + | 16146366 | 16146373 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr5 | + | 16866957 | 16866964 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr5 | + | 17306600 | 17306607 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr12 | + | 26274670 | 26274677 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr19 | + | 33392615 | 33392622 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr5 | + | 35617947 | 35617954 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr17 | + | 41777867 | 41777874 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr10 | + | 44314091 | 44314098 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr7 | + | 44767421 | 44767428 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | + | 47884424 | 47884431 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | + | 50035745 | 50035752 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr10 | + | 58967618 | 58967625 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr1 | + | 58982774 | 58982781 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr1 | + | 65026411 | 65026418 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr17 | + | 77437249 | 77437256 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr10 | + | 78775312 | 78775319 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr1 | + | 81127184 | 81127191 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr14 | + | 99606431 | 99606438 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr15 | + | 101121949 | 101121956 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr10 | + | 102644808 | 102644815 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr12 | + | 109861719 | 109861726 | 8.92e-05 | 0.238 | cctggcga |
CCTGGKGA | DREME-4 | chr13 | + | 112756636 | 112756643 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr2 | + | 120716415 | 120716422 | 8.92e-05 | 0.238 | cctggaga |
CCTGGKGA | DREME-4 | chr7 | + | 128361910 | 128361917 | 8.92e-05 | 0.238 | CCTGGCGA |
CCTGGKGA | DREME-4 | chr9 | + | 128888196 | 128888203 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr1 | + | 206909857 | 206909864 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr1 | + | 206909973 | 206909980 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr1 | + | 223022974 | 223022981 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr2 | + | 241505445 | 241505452 | 8.92e-05 | 0.238 | CCTGGAGA |
CCTGGKGA | DREME-4 | chr2 | + | 241505811 | 241505818 | 8.92e-05 | 0.238 | CCTGGAGA |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_8 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif CCTGGKGA /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_8 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out/dreme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.