Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 GCCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GGTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATGACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATG
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCCAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 GCCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACACTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATCTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCG
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAGA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 GTGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCAGC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGCCTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAC
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 CTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAG
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGCCCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GCTAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GGCCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTC
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CGTAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTCTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAGA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAGTCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/background):
A 0.209 C 0.291 G 0.291 T 0.209


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M4479_1.02 TCF12 chr1 + 24694459 24694469 2.42e-07 0.0351 acagcagctgt
M4479_1.02 TCF12 chr1 - 27300672 27300682 2.42e-07 0.0351 ACAGCAGCTGT
M4479_1.02 TCF12 chr14 + 76486422 76486432 2.42e-07 0.0351 ACAGCAGCTGT
M4479_1.02 TCF12 chr1 - 153967210 153967220 2.42e-07 0.0351 ACAGCAGCTGT
M4479_1.02 TCF12 chr6 - 41456916 41456926 5.8e-07 0.0529 GCAGCAGCTGT
M4479_1.02 TCF12 chr10 - 101019190 101019200 5.8e-07 0.0529 GCAGCAGCTGT
M4479_1.02 TCF12 chr12 + 26274776 26274786 8.21e-07 0.0529 AGAGCAGCTGT
M4479_1.02 TCF12 chr22 + 32881170 32881180 8.21e-07 0.0529 AGAGCAGCTGT
M4479_1.02 TCF12 chr7 - 44184567 44184577 8.21e-07 0.0529 AGAGCAGCTGT
M4479_1.02 TCF12 chr5 + 16867073 16867083 1.16e-06 0.056 ACAGCAGCTGG
M4479_1.02 TCF12 chr19 - 41127793 41127803 1.16e-06 0.056 ACAGCAGCTGG
M4479_1.02 TCF12 chr17 - 41777734 41777744 1.16e-06 0.056 ACAGCAGCTGG
M4479_1.02 TCF12 chr10 - 127485290 127485300 1.4e-06 0.0625 ACAGCAGGTGT
M4479_1.02 TCF12 chr17 - 82330703 82330713 1.91e-06 0.0792 GGAGCAGCTGT
M4479_1.02 TCF12 chr5 + 32116183 32116193 2.38e-06 0.0806 gcagcagctgg
M4479_1.02 TCF12 chr10 + 71266637 71266647 2.38e-06 0.0806 GCAGCAGCTGG
M4479_1.02 TCF12 chr2 + 216339952 216339962 2.38e-06 0.0806 GCAGCAGCTGG
M4479_1.02 TCF12 chr8 - 30950317 30950327 3.06e-06 0.0806 GCAGCAGGTGT
M4479_1.02 TCF12 chr15 + 75694998 75695008 3.06e-06 0.0806 acagcagctgc
M4479_1.02 TCF12 chr3 + 194134931 194134941 3.06e-06 0.0806 ACAGCAGCTGC
M4479_1.02 TCF12 chr1 - 229694482 229694492 3.06e-06 0.0806 ACAGCAGCTGC
M4479_1.02 TCF12 chr2 - 241499884 241499894 3.06e-06 0.0806 GCAGCAGGTGT
M4479_1.02 TCF12 chr18 + 48605693 48605703 3.3e-06 0.0832 ACTGCAGCTGT
M4479_1.02 TCF12 chr15 + 67030352 67030362 3.54e-06 0.0844 gaagcagctgt
M4479_1.02 TCF12 chr1 + 15112303 15112313 3.78e-06 0.0844 TCAGCAGCTGT
M4479_1.02 TCF12 chr3 + 171809879 171809889 3.78e-06 0.0844 TCAGCAGCTGT
M4479_1.02 TCF12 chr22 - 17266848 17266858 4.12e-06 0.0885 CCAGCAGCTGT
M4479_1.02 TCF12 chr16 + 85525202 85525212 5.17e-06 0.107 GCAGCAGCTGC
M4479_1.02 TCF12 chr12 + 113232871 113232881 6.02e-06 0.116 ACAGCAGGTGG
M4479_1.02 TCF12 chr11 + 120645908 120645918 6.02e-06 0.116 ACAGCAGGTGG
M4479_1.02 TCF12 chr17 - 65100798 65100808 6.26e-06 0.117 AAAGCAGCTGG
M4479_1.02 TCF12 chr14 - 103607293 103607303 6.68e-06 0.118 ACACCAGCTGT
M4479_1.02 TCF12 chr10 - 77305700 77305710 7.15e-06 0.118 GGAGCAGCTGG
M4479_1.02 TCF12 chr1 - 89524459 89524469 7.15e-06 0.118 GGAGCAGCTGG
M4479_1.02 TCF12 chr7 - 138001533 138001543 7.15e-06 0.118 GGAGCAGCTGG
M4479_1.02 TCF12 chr8 - 23714927 23714937 7.83e-06 0.123 AGAGCAGCTGC
M4479_1.02 TCF12 chr11 + 117870453 117870463 7.83e-06 0.123 AGAGCAGCTGc
M4479_1.02 TCF12 chr20 - 63224702 63224712 8.98e-06 0.131 ACGGCAGCTGT
M4479_1.02 TCF12 chr9 + 134379273 134379283 9.23e-06 0.131 GCAACAGCTGT
M4479_1.02 TCF12 chr9 - 134379276 134379286 9.23e-06 0.131 GCAACAGCTGT
M4479_1.02 TCF12 chr1 + 92485896 92485906 9.7e-06 0.131 GCAGCAGGTGG
M4479_1.02 TCF12 chr19 - 36604862 36604872 1e-05 0.131 ACAGCAGGTGC
M4479_1.02 TCF12 chr22 - 39292593 39292603 1e-05 0.131 ACAGCAGGTGC
M4479_1.02 TCF12 chr16 + 87924437 87924447 1e-05 0.131 ACAGCAGGTGC
M4479_1.02 TCF12 chr6 - 1070451 1070461 1.1e-05 0.131 ACTGCAGGTGT
M4479_1.02 TCF12 chr8 - 22877802 22877812 1.1e-05 0.131 ACTGCAGGTGT
M4479_1.02 TCF12 chr14 + 103021998 103022008 1.1e-05 0.131 GAAGCAGCTGG
M4479_1.02 TCF12 chr2 + 24833369 24833379 1.18e-05 0.131 gaagcaggtgt
M4479_1.02 TCF12 chr12 + 124506804 124506814 1.18e-05 0.131 GCaccagctgt
M4479_1.02 TCF12 chr17 + 82330526 82330536 1.21e-05 0.131 TCAGCAGCTGG
M4479_1.02 TCF12 chr15 + 67030041 67030051 1.24e-05 0.131 TCAGCAGGTGT
M4479_1.02 TCF12 chr11 - 117870386 117870396 1.24e-05 0.131 TCAGCAGGTGT
M4479_1.02 TCF12 chr3 - 194621562 194621572 1.24e-05 0.131 TCAGCAGGTGT
M4479_1.02 TCF12 chr9 + 136144005 136144015 1.28e-05 0.131 CCAGCAGCTGG
M4479_1.02 TCF12 chr1 + 1907569 1907579 1.33e-05 0.131 CCAGCAGGTGT
M4479_1.02 TCF12 chr1 + 26328338 26328348 1.33e-05 0.131 CCAGCAGGTGT
M4479_1.02 TCF12 chr8 - 29126789 29126799 1.33e-05 0.131 CCAGCAGGTGT
M4479_1.02 TCF12 chr8 + 41713116 41713126 1.33e-05 0.131 CCAGCAGGTGT
M4479_1.02 TCF12 chr1 + 229410736 229410746 1.33e-05 0.131 ccagcaggtgt
M4479_1.02 TCF12 chr6 - 43933343 43933353 1.4e-05 0.133 GGAGCAGCTGC
M4479_1.02 TCF12 chr10 + 132447116 132447126 1.4e-05 0.133 GGAGCAGCTGC
M4479_1.02 TCF12 chr19 - 38596479 38596489 1.63e-05 0.144 GCAGCAGGTGC
M4479_1.02 TCF12 chr2 + 85772279 85772289 1.67e-05 0.144 GCTGCAGCTGG
M4479_1.02 TCF12 chr1 + 92485613 92485623 1.67e-05 0.144 GCTGCAGCTGG
M4479_1.02 TCF12 chr17 - 81926746 81926756 1.74e-05 0.144 GCTGCAGGTGT
M4479_1.02 TCF12 chr5 - 139697275 139697285 1.74e-05 0.144 ACTGCAGCTGC
M4479_1.02 TCF12 chr9 + 136160646 136160656 1.77e-05 0.144 GAAGCAGCTGC
M4479_1.02 TCF12 chr8 - 10654881 10654891 1.81e-05 0.144 TCAGCAGCTGC
M4479_1.02 TCF12 chr22 + 36451997 36452007 1.9e-05 0.144 CCAGCAGCTGC
M4479_1.02 TCF12 chr17 + 50178635 50178645 1.9e-05 0.144 acaacagctgg
M4479_1.02 TCF12 chr14 - 58777652 58777662 1.9e-05 0.144 GATGCAGCTGT
M4479_1.02 TCF12 chr15 - 65415321 65415331 1.9e-05 0.144 CCAGCAGCTGC
M4479_1.02 TCF12 chr10 - 132447119 132447129 1.9e-05 0.144 CCAGCAGCTGC
M4479_1.02 TCF12 chr1 - 160046661 160046671 1.9e-05 0.144 ACAACAGCTGG
M4479_1.02 TCF12 chr10 - 624962 624972 1.98e-05 0.144 CCTGCAGCTGT
M4479_1.02 TCF12 chr7 - 3722687 3722697 1.98e-05 0.144 CCTGCAGCTGT
M4479_1.02 TCF12 chr17 - 17914173 17914183 1.98e-05 0.144 CCTGCAGCTGT
M4479_1.02 TCF12 chr10 + 71266179 71266189 1.98e-05 0.144 CCTGCAGCTGT
M4479_1.02 TCF12 chr16 + 89917819 89917829 1.98e-05 0.144 CCTGCAGCTGT
M4479_1.02 TCF12 chr1 - 183040220 183040230 1.99e-05 0.144 AAAACAGCTGT
M4479_1.02 TCF12 chr17 + 48588002 48588012 2.07e-05 0.148 AAAGCAGGTGG
M4479_1.02 TCF12 chr12 + 8039076 8039086 2.12e-05 0.148 AGGGCAGCTGT
M4479_1.02 TCF12 chr15 - 78212779 78212789 2.12e-05 0.148 AGGGCAGCTGT
M4479_1.02 TCF12 chr2 - 241499959 241499969 2.2e-05 0.149 AAACCAGCTGT
M4479_1.02 TCF12 chr4 - 1533779 1533789 2.25e-05 0.149 GGAGCAGGTGG
M4479_1.02 TCF12 chr8 + 38567004 38567014 2.25e-05 0.149 GGAGCAGGTGG
M4479_1.02 TCF12 chr1 + 180195040 180195050 2.25e-05 0.149 GGAGCAGGTGG
M4479_1.02 TCF12 chr1 + 3403193 3403203 2.28e-05 0.149 AGAGCAGGTGC
M4479_1.02 TCF12 chr1 - 110120985 110120995 2.34e-05 0.149 AGTGCAGGTGT
M4479_1.02 TCF12 chr12 - 121748495 121748505 2.37e-05 0.149 GGACCAGCTGT
M4479_1.02 TCF12 chr1 + 227794132 227794142 2.37e-05 0.149 GGACCAGCTGT
M4479_1.02 TCF12 chr5 + 174372161 174372171 2.41e-05 0.149 TGAGCAGCTGG
M4479_1.02 TCF12 chr1 - 224503579 224503589 2.41e-05 0.149 TGAGCAGCTGG
M4479_1.02 TCF12 chr2 + 85772647 85772657 2.48e-05 0.149 CGAGCAGCTGG
M4479_1.02 TCF12 chr6 + 15662409 15662419 2.51e-05 0.149 CGAGCAGGTGT
M4479_1.02 TCF12 chr6 - 37222602 37222612 2.58e-05 0.149 GCTGCAGCTGC
M4479_1.02 TCF12 chr6 + 37222605 37222615 2.58e-05 0.149 gctgcagctgc
M4479_1.02 TCF12 chr1 + 209675440 209675450 2.58e-05 0.149 GCTGCAGCTGC
M4479_1.02 TCF12 chr1 + 226083893 226083903 2.58e-05 0.149 GCTGCAGCTGC
M4479_1.02 TCF12 chr1 + 229694479 229694489 2.58e-05 0.149 GCTGCAGCTGC
M4479_1.02 TCF12 chr1 - 227914487 227914497 2.69e-05 0.153 GCAACAGCTGG
M4479_1.02 TCF12 chr9 + 98172689 98172699 2.69e-05 0.153 GCAACAGCTGG
M4479_1.02 TCF12 chr1 + 222546667 222546677 2.8e-05 0.153 GAAACAGCTGT
M4479_1.02 TCF12 chr15 + 75694838 75694848 2.87e-05 0.153 ACTGCAGGTGG
M4479_1.02 TCF12 chr1 + 168243558 168243568 2.87e-05 0.153 ACTGCAGGTGG
M4479_1.02 TCF12 chr15 - 45403172 45403182 2.98e-05 0.153 GCACCAGCTGG
M4479_1.02 TCF12 chr7 - 114653559 114653569 2.98e-05 0.153 CCAACAGCTGT
M4479_1.02 TCF12 chr5 - 172355210 172355220 2.98e-05 0.153 GCACCAGCTGG
M4479_1.02 TCF12 chr19 + 5962187 5962197 3.07e-05 0.153 ACACCAGCTGC
M4479_1.02 TCF12 chr17 + 17523628 17523638 3.15e-05 0.153 TCAGCAGGTGG
M4479_1.02 TCF12 chr8 + 26641869 26641879 3.15e-05 0.153 ggggcagctgt
M4479_1.02 TCF12 chr3 + 64239288 64239298 3.15e-05 0.153 GGGGCAGCTGT
M4479_1.02 TCF12 chr5 + 149805980 149805990 3.15e-05 0.153 GGGGCAGCTGT
M4479_1.02 TCF12 chr3 + 195270751 195270761 3.15e-05 0.153 TCAGCAGGTGG
M4479_1.02 TCF12 chr1 + 227762273 227762283 3.15e-05 0.153 GGGGCAGCTGT
M4479_1.02 TCF12 chr22 - 43848888 43848898 3.22e-05 0.153 CCAGCAGGTGG
M4479_1.02 TCF12 chr22 - 50237319 50237329 3.22e-05 0.153 CCAGCAGGTGG
M4479_1.02 TCF12 chr5 + 35617793 35617803 3.22e-05 0.153 CCAGCAGGTGG
M4479_1.02 TCF12 chr21 + 45780777 45780787 3.22e-05 0.153 ccagcaggtgg
M4479_1.02 TCF12 chr20 + 63224780 63224790 3.22e-05 0.153 CCAGCAGGTGG
M4479_1.02 TCF12 chr12 + 69043190 69043200 3.22e-05 0.153 ccagcaggtgg
M4479_1.02 TCF12 chr7 + 101857063 101857073 3.22e-05 0.153 CCAGCAGGTGG
M4479_1.02 TCF12 chr15 + 101121822 101121832 3.31e-05 0.156 ACTCCAGCTGT
M4479_1.02 TCF12 chr19 - 1028607 1028617 3.33e-05 0.156 GAACCAGCTGT
M4479_1.02 TCF12 chr16 + 10976645 10976655 3.45e-05 0.16 TCACCAGCTGT
M4479_1.02 TCF12 chr8 - 38567177 38567187 3.48e-05 0.16 CAAGCAGCTGG
M4479_1.02 TCF12 chr19 - 5046489 5046499 3.54e-05 0.16 CCACCAGCTGT
M4479_1.02 TCF12 chr5 + 76403090 76403100 3.54e-05 0.16 CCACCAGCTGT
M4479_1.02 TCF12 chr1 + 229694623 229694633 3.59e-05 0.161 GGTGCAGCTGG
M4479_1.02 TCF12 chr17 - 7886160 7886170 3.76e-05 0.164 AGAACAGCTGG
M4479_1.02 TCF12 chr19 - 40603757 40603767 3.76e-05 0.164 AGAACAGCTGG
M4479_1.02 TCF12 chr18 - 50748714 50748724 3.76e-05 0.164 AGAACAGCTGG
M4479_1.02 TCF12 chr15 + 65415318 65415328 3.76e-05 0.164 CGAGCAGCTGC
M4479_1.02 TCF12 chr3 + 73490847 73490857 3.87e-05 0.167 AGACCAGCTGG
M4479_1.02 TCF12 chr17 - 75565389 75565399 3.89e-05 0.167 AGACCAGGTGT
M4479_1.02 TCF12 chrX - 46904168 46904178 3.95e-05 0.168 GCAGCAGATGT
M4479_1.02 TCF12 chr14 + 67532940 67532950 4.02e-05 0.169 GCGGCAGCTGG
M4479_1.02 TCF12 chr17 + 81821818 81821828 4.02e-05 0.169 GCGGCAGCTGG
M4479_1.02 TCF12 chr19 + 5962091 5962101 4.17e-05 0.17 ACAGCAGCTGA
M4479_1.02 TCF12 chr12 + 49869455 49869465 4.17e-05 0.17 ACAGCAGCTGA
M4479_1.02 TCF12 chr15 + 70033873 70033883 4.17e-05 0.17 ACAGCAGCTGA
M4479_1.02 TCF12 chr19 + 33273217 33273227 4.23e-05 0.17 gaggcagctgt
M4479_1.02 TCF12 chr6 - 154615776 154615786 4.23e-05 0.17 GAGGCAGCTGT
M4479_1.02 TCF12 chr19 - 18438704 18438714 4.35e-05 0.17 GCTGCAGGTGG
M4479_1.02 TCF12 chr6 - 53651842 53651852 4.35e-05 0.17 GCTGCAGGTGG
M4479_1.02 TCF12 chr14 - 67532943 67532953 4.47e-05 0.17 GCACCAGCTGC
M4479_1.02 TCF12 chr8 - 38567267 38567277 4.5e-05 0.17 TCAGCAGGTGC
M4479_1.02 TCF12 chr19 + 50921943 50921953 4.5e-05 0.17 tcagcaggtgc
M4479_1.02 TCF12 chr10 + 71266485 71266495 4.5e-05 0.17 TCAGCAGGTGC
M4479_1.02 TCF12 chr1 + 160046465 160046475 4.5e-05 0.17 TCAGCAGGTGC
M4479_1.02 TCF12 chr1 - 12433685 12433695 4.69e-05 0.17 CCAGCAGGTGC
M4479_1.02 TCF12 chr12 - 132400961 132400971 4.69e-05 0.17 AATGCAGCTGC
M4479_1.02 TCF12 chr8 - 143289389 143289399 4.69e-05 0.17 CCAGCAGGTGC
M4479_1.02 TCF12 chr3 + 169669329 169669339 4.69e-05 0.17 GCTCCAGCTGT
M4479_1.02 TCF12 chr3 - 169669372 169669382 4.69e-05 0.17 GCTCCAGCTGT
M4479_1.02 TCF12 chr1 - 223023229 223023239 4.69e-05 0.17 GCTCCAGCTGT
M4479_1.02 TCF12 chr1 + 12433558 12433568 4.72e-05 0.17 TCTGCAGCTGG
M4479_1.02 TCF12 chr22 - 17266601 17266611 4.72e-05 0.17 TCTGCAGCTGG
M4479_1.02 TCF12 chr5 + 52840635 52840645 4.76e-05 0.17 AGAGCAGATGT
M4479_1.02 TCF12 chr1 - 31239492 31239502 4.84e-05 0.17 CCTGCAGCTGG
M4479_1.02 TCF12 chr5 - 76403110 76403120 4.84e-05 0.17 CCTGCAGCTGG
M4479_1.02 TCF12 chr16 + 85525220 85525230 4.84e-05 0.17 CCTGCAGCTGG
M4479_1.02 TCF12 chr8 + 97434382 97434392 4.84e-05 0.17 CCTGCAGCTGG
M4479_1.02 TCF12 chr3 - 142578355 142578365 4.84e-05 0.17 CCTGCAGCTGG
M4479_1.02 TCF12 chr22 + 19975265 19975275 4.87e-05 0.17 CCTGCAGGTGT
M4479_1.02 TCF12 chr9 - 136160603 136160613 4.87e-05 0.17 CCTGCAGGTGT
M4479_1.02 TCF12 chr6 + 154616055 154616065 4.92e-05 0.17 AAAACAGCTGG
M4479_1.02 TCF12 chr1 + 223023226 223023236 4.92e-05 0.17 AAAACAGCTGG
M4479_1.02 TCF12 chr6 - 37222608 37222618 5.02e-05 0.172 GGTGCAGCTGC
M4479_1.02 TCF12 chr5 + 52840382 52840392 5.14e-05 0.174 AGGGCAGCTGG
M4479_1.02 TCF12 chr20 + 60058544 60058554 5.14e-05 0.174 AGGGCAGCTGG
M4479_1.02 TCF12 chr19 + 1028604 1028614 5.21e-05 0.174 GGAACAGCTGG
M4479_1.02 TCF12 chr19 + 5046486 5046496 5.21e-05 0.174 GGAACAGCTGG
M4479_1.02 TCF12 chr2 - 120245454 120245464 5.21e-05 0.174 AGGGCAGGTGT
M4479_1.02 TCF12 chr1 + 24321802 24321812 5.37e-05 0.177 AAACCAGCTGG
M4479_1.02 TCF12 chr9 + 136143831 136143841 5.37e-05 0.177 AAACCAGCTGG
M4479_1.02 TCF12 chr20 - 63224579 63224589 5.4e-05 0.177 AGTACAGCTGT
M4479_1.02 TCF12 chr13 + 39768287 39768297 5.55e-05 0.179 GGACCAGCTGG
M4479_1.02 TCF12 chr3 + 48598763 48598773 5.55e-05 0.179 GGACCAGCTGG
M4479_1.02 TCF12 chr12 + 49869266 49869276 5.55e-05 0.179 GGACCAGCTGG
M4479_1.02 TCF12 chr10 + 102645090 102645100 5.7e-05 0.182 CGAGCAGGTGG
M4479_1.02 TCF12 chr10 - 121310331 121310341 5.77e-05 0.184 AGTCCAGCTGT
M4479_1.02 TCF12 chr16 + 2148098 2148108 5.79e-05 0.184 TGACCAGCTGT
M4479_1.02 TCF12 chr1 - 92485725 92485735 5.89e-05 0.184 GCGGCAGCTGC
M4479_1.02 TCF12 chr17 - 82236708 82236718 5.92e-05 0.184 GCAGCAGCTGA
M4479_1.02 TCF12 chr1 + 229411046 229411056 5.92e-05 0.184 GCAGCAGCTGA
M4479_1.02 TCF12 chr10 - 102644979 102644989 6.03e-05 0.184 GCTGCAGGTGC
M4479_1.02 TCF12 chr6 - 41456870 41456880 6.15e-05 0.184 GCAACAGGTGG
M4479_1.02 TCF12 chr6 + 43933340 43933350 6.23e-05 0.184 TCTGCAGCTGC
M4479_1.02 TCF12 chr1 + 9473312 9473322 6.33e-05 0.184 CCTGCAGCTGC
M4479_1.02 TCF12 chr19 + 17305526 17305536 6.33e-05 0.184 CCTGCAGCTGC
M4479_1.02 TCF12 chr9 - 136160649 136160659 6.33e-05 0.184 CCTGCAGCTGC
M4479_1.02 TCF12 chr1 - 160046597 160046607 6.33e-05 0.184 ACTACAGCTGG
M4479_1.02 TCF12 chr5 - 172195501 172195511 6.33e-05 0.184 CCTGCAGCTGC
M4479_1.02 TCF12 chr1 + 229410925 229410935 6.33e-05 0.184 CCTGCAGCTGC
M4479_1.02 TCF12 chr1 - 236001883 236001893 6.33e-05 0.184 AAGGCAGCTGG
M4479_1.02 TCF12 chr16 - 10976648 10976658 6.43e-05 0.184 GAAACAGCTGG
M4479_1.02 TCF12 chr12 - 113245992 113246002 6.43e-05 0.184 GAAACAGCTGG
M4479_1.02 TCF12 chr3 + 169669369 169669379 6.43e-05 0.184 GAAACAGCTGG
M4479_1.02 TCF12 chr1 - 236001853 236001863 6.47e-05 0.184 GAAACAGGTGT
M4479_1.02 TCF12 chr19 - 5962190 5962200 6.53e-05 0.184 GTAGCAGCTGG
M4479_1.02 TCF12 chr22 - 37633831 37633841 6.53e-05 0.184 GTAGCAGCTGG
M4479_1.02 TCF12 chr12 + 113232908 113232918 6.53e-05 0.184 GTAGCAGCTGG
M4479_1.02 TCF12 chr15 + 74546472 74546482 6.59e-05 0.184 GTAGCAGGTGT
M4479_1.02 TCF12 chr3 - 194134934 194134944 6.59e-05 0.184 ATAGCAGCTGC
M4479_1.02 TCF12 chr1 - 229230781 229230791 6.59e-05 0.184 GTAGCAGGTGT
M4479_1.02 TCF12 chr17 - 17523570 17523580 6.63e-05 0.184 CCAACAGCTGG
M4479_1.02 TCF12 chr8 - 37545714 37545724 6.63e-05 0.184 CCAACAGCTGG
M4479_1.02 TCF12 chr8 - 37545714 37545724 6.63e-05 0.184 CCAACAGCTGG
M4479_1.02 TCF12 chr1 + 3403112 3403122 6.71e-05 0.184 ccAACAGGTGT
M4479_1.02 TCF12 chr19 + 40605462 40605472 6.71e-05 0.184 GCACCAGGTGG
M4479_1.02 TCF12 chr20 - 62887864 62887874 6.81e-05 0.185 GGGGCAGCTGG
M4479_1.02 TCF12 chr5 + 169081327 169081337 6.81e-05 0.185 GGGGCAGCTGG
M4479_1.02 TCF12 chr1 - 9473315 9473325 6.92e-05 0.185 AGGGCAGCTGC
M4479_1.02 TCF12 chr10 - 122504878 122504888 6.92e-05 0.185 AGGGCAGCTGC
M4479_1.02 TCF12 chr5 + 139697272 139697282 6.92e-05 0.185 AGGGCAGCTGC
M4479_1.02 TCF12 chr22 - 32881173 32881183 6.97e-05 0.185 GGAACAGCTGC
M4479_1.02 TCF12 chr17 - 49976309 49976319 6.97e-05 0.185 GGAACAGCTGC
M4479_1.02 TCF12 chr9 + 69099394 69099404 7.11e-05 0.188 actccagctgg
M4479_1.02 TCF12 chr1 + 3403221 3403231 7.3e-05 0.192 GCCGCAGGTGT
M4479_1.02 TCF12 chr15 - 75694791 75694801 7.3e-05 0.192 GAACCAGCTGG
M4479_1.02 TCF12 chr2 - 85772650 85772660 7.35e-05 0.192 AAACCAGCTGC
M4479_1.02 TCF12 chr19 - 3266687 3266697 7.59e-05 0.196 CAAGCAGGTGG
M4479_1.02 TCF12 chr1 - 26328204 26328214 7.59e-05 0.196 CAAGCAGGTGG
M4479_1.02 TCF12 chr17 + 74430936 74430946 7.59e-05 0.196 CCACCAGCTGG
M4479_1.02 TCF12 chr17 + 81926674 81926684 7.91e-05 0.203 GGACCAGCTGC
M4479_1.02 TCF12 chr17 + 17523567 17523577 8.01e-05 0.204 CAACCAGCTGT
M4479_1.02 TCF12 chr13 - 51262869 51262879 8.01e-05 0.204 TGAGCAGGTGC
M4479_1.02 TCF12 chr10 + 121310456 121310466 8.12e-05 0.205 AGAACAGGTGG
M4479_1.02 TCF12 chr17 - 50178393 50178403 8.15e-05 0.205 TGTGCAGCTGG
M4479_1.02 TCF12 chr1 - 110120965 110120975 8.17e-05 0.205 TGTGCAGGTGT
M4479_1.02 TCF12 chr17 - 82330557 82330567 8.22e-05 0.206 CGTGCAGCTGG
M4479_1.02 TCF12 chr17 + 17523488 17523498 8.37e-05 0.208 GCAGCAGATGG
M4479_1.02 TCF12 chr15 + 65415439 65415449 8.51e-05 0.21 TCAGCAGATGT
M4479_1.02 TCF12 chr11 + 12067173 12067183 8.6e-05 0.21 GCGGCAGGTGG
M4479_1.02 TCF12 chr17 + 65100725 65100735 8.6e-05 0.21 GCGGCAGGTGG
M4479_1.02 TCF12 chr1 - 183040424 183040434 8.6e-05 0.21 CCAGCAGATGT
M4479_1.02 TCF12 chr3 + 13057924 13057934 8.71e-05 0.21 ACAGCAGGTGA
M4479_1.02 TCF12 chr22 + 42365710 42365720 8.79e-05 0.21 GAGGCAGCTGG
M4479_1.02 TCF12 chr7 - 50963263 50963273 8.79e-05 0.21 GAGGCAGCTGG
M4479_1.02 TCF12 chr17 - 74430870 74430880 8.79e-05 0.21 GAGGCAGCTGG
M4479_1.02 TCF12 chr12 - 123105690 123105700 8.79e-05 0.21 GAGGCAGCTGG
M4479_1.02 TCF12 chr5 - 139697123 139697133 8.79e-05 0.21 GAGGCAGCTGG
M4479_1.02 TCF12 chr5 - 16867059 16867069 8.95e-05 0.211 AAGGCAGCTGC
M4479_1.02 TCF12 chr3 + 115148003 115148013 8.95e-05 0.211 GAGGCAGGTGT
M4479_1.02 TCF12 chr5 + 172195498 172195508 8.95e-05 0.211 AAGGCAGCTGC
M4479_1.02 TCF12 chr15 + 77527127 77527137 9.07e-05 0.211 aaagcagctga
M4479_1.02 TCF12 chr17 - 81926677 81926687 9.2e-05 0.211 CCGGCAGCTGG
M4479_1.02 TCF12 chr1 - 92485857 92485867 9.2e-05 0.211 CCGGCAGCTGG
M4479_1.02 TCF12 chr1 - 229410928 229410938 9.2e-05 0.211 GTAGCAGCTGC
M4479_1.02 TCF12 chr3 + 169669182 169669192 9.34e-05 0.211 GCACCAGGTGC
M4479_1.02 TCF12 chr16 - 85525205 85525215 9.48e-05 0.211 GGGGCAGCTGC
M4479_1.02 TCF12 chr9 - 132182890 132182900 9.48e-05 0.211 GGGGCAGCTGC
M4479_1.02 TCF12 chr5 - 17306549 17306559 9.65e-05 0.211 GCTCCAGCTGG
M4479_1.02 TCF12 chr8 + 22392741 22392751 9.65e-05 0.211 GCTCCAGCTGG
M4479_1.02 TCF12 chr22 - 32881040 32881050 9.65e-05 0.211 CAGGCAGCTGT
M4479_1.02 TCF12 chr17 + 41777877 41777887 9.65e-05 0.211 GCTCCAGCTGG
M4479_1.02 TCF12 chr17 - 41777880 41777890 9.65e-05 0.211 GCTCCAGCTGG
M4479_1.02 TCF12 chr1 - 44786407 44786417 9.65e-05 0.211 GATGCAGGTGG
M4479_1.02 TCF12 chr17 + 49976306 49976316 9.65e-05 0.211 CAGGCAGCTGT
M4479_1.02 TCF12 chr17 + 50035529 50035539 9.65e-05 0.211 GGAGCAGCTGA
M4479_1.02 TCF12 chr17 - 75393975 75393985 9.65e-05 0.211 CAGGCAGCTGT
M4479_1.02 TCF12 chr17 - 78723360 78723370 9.65e-05 0.211 CCTACAGCTGT
M4479_1.02 TCF12 chr14 + 96204729 96204739 9.65e-05 0.211 GCTCCAGCTGG
M4479_1.02 TCF12 chr2 - 120245628 120245638 9.65e-05 0.211 CAGGCAGCTGT
M4479_1.02 TCF12 chr9 + 132182887 132182897 9.81e-05 0.212 gccgcagctgc
M4479_1.02 TCF12 chr7 + 138001530 138001540 9.81e-05 0.212 ACTCCAGCTGC
M4479_1.02 TCF12 chr1 - 226083896 226083906 9.81e-05 0.212 GCCGCAGCTGC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_11 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/background --motif M4479_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/fimo_out_11 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZIC2.IDR0.05.filt.narrowPeak.inPolsteinDNase.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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