Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TTGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 ACCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTA
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGT
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTT
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GTTGCGGGAT
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 TCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 TCCCGCTGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 ATTAATTAAT
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATTGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTAG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CTAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACT
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 ACTAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACT
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GAGCAATAGA
M1125_1.02 10 GCTAATTGGT
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 TTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ATTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 ACAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 TATTGTTTTT
M1601_1.02 9 ATTGTTTTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAAA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACATTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATTATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGAACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCTCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCTA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 AGAACATTCTGTTC
M4438_1.02 15 AGGTCATGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CACCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 ATGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCATCTGTTGCTAGG
M4477_1.02 19 CTATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCATC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACATAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCAAAGATGGCG
M4640_1.02 15 GGGCAGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGAGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCATCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTAGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 AACACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCT
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 TTTAATTATT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAAC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACT
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGTCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGACCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GATGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATTCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 TGTTAGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TTATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAAGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTTTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCAC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAAGGCGCGAAAA
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACTCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAATG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 AACCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACT
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATT
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 TTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTA
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ATTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACATAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATTATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TTCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 TAATTAAATT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGTGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CATAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGATTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 TTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TTTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAATTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGTG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCTAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAAA
M6459_1.02 14 AACCACAAAACCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCTGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 TCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTAGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTTTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTTTA
M6509_1.02 12 AAAAATAGCTCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAA
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 ACCCAGGTGG
M6529_1.02 7 TTTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGATGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GAGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATACCTGCGCCCCGT
M6557_1.02 12 GGAAAAAATCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.297 C 0.203 G 0.203 T 0.297


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M4612_1.02 CTCFL chr17 + 8094020 8094034 4.76e-09 0.0026 CCACAAGGGGGCGCC
M4612_1.02 CTCFL chr19 + 40348364 40348378 2.37e-07 0.0647 CCTCCCGGCGGCGCC
M4612_1.02 CTCFL chr18 - 48465396 48465410 8e-07 0.0778 CCACCAGAGGGCACA
M4612_1.02 CTCFL chr21 + 36123166 36123180 1.32e-06 0.0778 ccaacagagggagcc
M4612_1.02 CTCFL chr1 - 6404836 6404850 1.42e-06 0.0778 CCCCTAGGTGGAGCC
M4612_1.02 CTCFL chr7 - 138708131 138708145 2.55e-06 0.0778 CCGGGAGGTGGAGCT
M4612_1.02 CTCFL chr18 + 2565969 2565983 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr1 + 6404630 6404644 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr17 + 7449966 7449980 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr11 - 20441385 20441399 2.85e-06 0.0778 CCGGGAGGCGGAGCT
M4612_1.02 CTCFL chr1 + 26903933 26903947 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr20 - 34026482 34026496 2.85e-06 0.0778 CCGGGAGGCGGAGCT
M4612_1.02 CTCFL chr15 + 41247891 41247905 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr5 - 45172929 45172943 2.85e-06 0.0778 CCGGGAGGCGGAGCT
M4612_1.02 CTCFL chr3 + 61732499 61732513 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chrX - 72720090 72720104 2.85e-06 0.0778 CCGGGAGGCGGAGCT
M4612_1.02 CTCFL chr12 + 103286173 103286187 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr7 + 129819561 129819575 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr1 + 226199458 226199472 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr1 + 226747932 226747946 2.85e-06 0.0778 ccgggaggcggagct
M4612_1.02 CTCFL chr17 - 7359626 7359640 3.04e-06 0.0789 CAGCCTGGTGGCGCC
M4612_1.02 CTCFL chr1 - 244940328 244940342 3.52e-06 0.0874 CCCCAAGGGGGAGGT
M4612_1.02 CTCFL chr9 + 130342176 130342190 3.92e-06 0.0888 CCTGCAGGGTGAGCC
M4612_1.02 CTCFL chr17 + 16406717 16406731 4.75e-06 0.0888 ccgggaggtggaggc
M4612_1.02 CTCFL chr3 + 57590013 57590027 4.75e-06 0.0888 ccgggaggtggaggc
M4612_1.02 CTCFL chr19 - 40348338 40348352 5.08e-06 0.0888 GCGCGAGTGGGCGCG
M4612_1.02 CTCFL chr17 - 43576384 43576398 5.1e-06 0.0888 CCAGCAGGTGGAGGT
M4612_1.02 CTCFL chr17 - 20132819 20132833 5.25e-06 0.0888 CCAGGAGGTGGAGCT
M4612_1.02 CTCFL chr8 - 30923095 30923109 5.25e-06 0.0888 CCAGGAGGTGGAGCT
M4612_1.02 CTCFL chrX - 73792785 73792799 5.25e-06 0.0888 CCAGGAGGTGGAGCT
M4612_1.02 CTCFL chr6 + 87555026 87555040 5.25e-06 0.0888 ccaggaggtggagct
M4612_1.02 CTCFL chr14 - 102623488 102623502 5.83e-06 0.0888 CCAGGAGGCGGAGCT
M4612_1.02 CTCFL chr5 + 32282343 32282357 7.29e-06 0.0888 ccgggaggcggggct
M4612_1.02 CTCFL chr19 + 46797231 46797245 8.27e-06 0.0888 ccaggaggaggagct
M4612_1.02 CTCFL chr11 - 67122755 67122769 8.72e-06 0.0888 CCAGGAGGCGGAGCG
M4612_1.02 CTCFL chr3 + 61732631 61732645 9.3e-06 0.0888 ccgagaggcggagct
M4612_1.02 CTCFL chr12 - 32017515 32017529 9.49e-06 0.0888 CCAGGAGGTGGAGGC
M4612_1.02 CTCFL chr8 + 18944493 18944507 9.49e-06 0.0888 ccaggaggtggaggc
M4612_1.02 CTCFL chr19 + 35462118 35462132 9.49e-06 0.0888 ccaggaggtggaggc
M4612_1.02 CTCFL chr19 - 40348693 40348707 1.04e-05 0.0888 CCGCCTGACGGCCCC
M4612_1.02 CTCFL chr17 - 32176652 32176666 1.05e-05 0.0888 CCAGGAGGCGGAGGC
M4612_1.02 CTCFL chr1 - 36266960 36266974 1.05e-05 0.0888 CCAGGAGGCGGAGGC
M4612_1.02 CTCFL chr1 - 14997320 14997334 1.14e-05 0.0888 CCGGGAGGTGGAGGT
M4612_1.02 CTCFL chr19 - 18401367 18401381 1.14e-05 0.0888 CCGGGAGGTGGAGGT
M4612_1.02 CTCFL chr16 - 30590833 30590847 1.14e-05 0.0888 CCGGGAGGTGGAGGT
M4612_1.02 CTCFL chr5 - 175559389 175559403 1.14e-05 0.0888 CCGGGAGGTGGAGGT
M4612_1.02 CTCFL chr1 - 237368903 237368917 1.14e-05 0.0888 CCGGGAGGTGGAGGT
M4612_1.02 CTCFL chr19 + 16590962 16590976 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chr16 + 21572466 21572480 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chr8 + 21954556 21954570 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chr5 + 36019625 36019639 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chr19 + 40301085 40301099 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chrX + 67213779 67213793 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chr16 + 67555174 67555188 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chr7 + 100761861 100761875 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chrX + 129554874 129554888 1.14e-05 0.0888 ccgggaggtggaggt
M4612_1.02 CTCFL chr8 + 28291403 28291417 1.24e-05 0.0888 gcggtggcgggcgcc
M4612_1.02 CTCFL chr8 - 17616274 17616288 1.25e-05 0.0888 CCGGGAGGCGGAGGT
M4612_1.02 CTCFL chr19 - 18106651 18106665 1.25e-05 0.0888 CCGGGAGGCGGAGGT
M4612_1.02 CTCFL chr16 - 22295595 22295609 1.25e-05 0.0888 CCGGGAGGCGGAGGT
M4612_1.02 CTCFL chr1 - 37934013 37934027 1.25e-05 0.0888 CCGGGAGGCGGAGGT
M4612_1.02 CTCFL chr22 - 41961260 41961274 1.25e-05 0.0888 CCGGGAGGCGGAGGT
M4612_1.02 CTCFL chr22 - 44777775 44777789 1.25e-05 0.0888 CCGGGAGGCGGAGGT
M4612_1.02 CTCFL chr1 - 84620293 84620307 1.25e-05 0.0888 CCGGGAGGCGGAGGT
M4612_1.02 CTCFL chr17 + 2112430 2112444 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr20 + 4613171 4613185 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr17 + 8093785 8093799 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr18 + 23654188 23654202 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr19 + 39165437 39165451 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr17 + 40325173 40325187 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr17 + 59442711 59442725 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr11 + 72433462 72433476 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr12 + 101467890 101467904 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr10 + 102892902 102892916 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr5 + 138026861 138026875 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr5 + 143105299 143105313 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr1 + 244940129 244940143 1.25e-05 0.0888 ccgggaggcggaggt
M4612_1.02 CTCFL chr5 - 36992822 36992836 1.37e-05 0.095 CCGGAAGGCGGAGTC
M4612_1.02 CTCFL chr12 - 122919849 122919863 1.39e-05 0.095 CACCCAGGGGGAGGT
M4612_1.02 CTCFL chr10 + 114649291 114649305 1.39e-05 0.095 ccagaaggcggaggc
M4612_1.02 CTCFL chr16 + 30052933 30052947 1.41e-05 0.0954 CAGGCGGGCGGCGGC
M4612_1.02 CTCFL chr6 - 43088827 43088841 1.46e-05 0.0975 CCAGGAGGAGGAGGC
M4612_1.02 CTCFL chr15 - 71084686 71084700 1.49e-05 0.0983 CCACCAAGAGGAGCC
M4612_1.02 CTCFL chr19 - 40348565 40348579 1.66e-05 0.107 CCGACGGTGGGCGGT
M4612_1.02 CTCFL chr19 - 40348583 40348597 1.66e-05 0.107 GCGGAGGGGAGCGCC
M4612_1.02 CTCFL chrX - 123770642 123770656 1.81e-05 0.113 CCACTGGGAGGCACT
M4612_1.02 CTCFL chr16 - 23593646 23593660 2.14e-05 0.113 CCTCCAGTGGGCTTC
M4612_1.02 CTCFL chr17 - 7450223 7450237 2.18e-05 0.113 CCAGGAGGTGGAGGT
M4612_1.02 CTCFL chr8 - 22964896 22964910 2.18e-05 0.113 CCAGGAGGTGGAGGT
M4612_1.02 CTCFL chr16 - 30499828 30499842 2.18e-05 0.113 CCAGGAGGTGGAGGT
M4612_1.02 CTCFL chr17 - 49136626 49136640 2.18e-05 0.113 CCAGGAGGTGGAGGT
M4612_1.02 CTCFL chr10 - 72580556 72580570 2.18e-05 0.113 CCAGGAGGTGGAGGT
M4612_1.02 CTCFL chr1 - 155575902 155575916 2.18e-05 0.113 CCAGGAGGTGGAGGT
M4612_1.02 CTCFL chr2 - 219321391 219321405 2.18e-05 0.113 CCAGGAGGTGGAGGT
M4612_1.02 CTCFL chr19 + 10103512 10103526 2.18e-05 0.113 ccaggaggtggaggt
M4612_1.02 CTCFL chr1 + 62356208 62356222 2.18e-05 0.113 ccaggaggtggaggt
M4612_1.02 CTCFL chr10 + 98867984 98867998 2.18e-05 0.113 ccaggaggtggaggt
M4612_1.02 CTCFL chr5 + 127023653 127023667 2.18e-05 0.113 ccaggaggtggaggt
M4612_1.02 CTCFL chr7 + 158785347 158785361 2.18e-05 0.113 ccaggaggtggaggt
M4612_1.02 CTCFL chr5 + 177111214 177111228 2.18e-05 0.113 ccaggaggtggaggt
M4612_1.02 CTCFL chr1 + 177115579 177115593 2.18e-05 0.113 ccaggaggtggaggt
M4612_1.02 CTCFL chr17 + 39353547 39353561 2.25e-05 0.113 ccaccaggggtcttg
M4612_1.02 CTCFL chr17 + 16407015 16407029 2.3e-05 0.113 GCTCCAGAGCGCGCT
M4612_1.02 CTCFL chr20 - 2172230 2172244 2.31e-05 0.113 CAGGCAGAGGGAGCA
M4612_1.02 CTCFL chr10 - 2365327 2365341 2.36e-05 0.113 CCGGGAGGCGGAGTT
M4612_1.02 CTCFL chr17 - 3984504 3984518 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chr10 - 12171804 12171818 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chr19 - 35323800 35323814 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chr19 - 40795479 40795493 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chr22 - 42474158 42474172 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chr1 - 64860533 64860547 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chrX - 130362216 130362230 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chr3 - 195819023 195819037 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chr1 - 204720821 204720835 2.39e-05 0.113 CCAGGAGGCGGAGGT
M4612_1.02 CTCFL chrX + 18726275 18726289 2.39e-05 0.113 ccaggaggcggaggt
M4612_1.02 CTCFL chr5 + 122696772 122696786 2.39e-05 0.113 ccaggaggcggaggt
M4612_1.02 CTCFL chr19 - 17108855 17108869 2.42e-05 0.113 ACGGTGGTGGGCGCC
M4612_1.02 CTCFL chr22 - 42474161 42474175 2.45e-05 0.113 CACCCAGGAGGCGGA
M4612_1.02 CTCFL chr19 - 41564545 41564559 2.52e-05 0.116 CAGGCAGAGGGCGAA
M4612_1.02 CTCFL chr12 + 57075248 57075262 2.54e-05 0.116 acggtggcgggcgcc
M4612_1.02 CTCFL chr17 + 35764106 35764120 2.67e-05 0.12 caaccagaggccgct
M4612_1.02 CTCFL chr1 - 245044646 245044660 2.69e-05 0.12 CCGGGAGGTAGAGCC
M4612_1.02 CTCFL chr19 + 2102650 2102664 2.76e-05 0.122 ccgggaggtggacct
M4612_1.02 CTCFL chr16 + 31037887 31037901 2.76e-05 0.122 CCTCCCAGGGGCACT
M4612_1.02 CTCFL chr17 + 16406906 16406920 2.85e-05 0.123 ccgggagatggaggc
M4612_1.02 CTCFL chr17 + 38667161 38667175 2.86e-05 0.123 ccagaaggtggaggt
M4612_1.02 CTCFL chr1 - 6404878 6404892 2.87e-05 0.123 CCCGGGTGGGGCGCG
M4612_1.02 CTCFL chr1 + 232893579 232893593 3.04e-05 0.13 ccgggaggtggagat
M4612_1.02 CTCFL chr2 - 84993655 84993669 3.15e-05 0.133 CCAGGAGGTGGAGGG
M4612_1.02 CTCFL chr1 + 16493372 16493386 3.29e-05 0.136 ccaggaggaggaggt
M4612_1.02 CTCFL chr5 + 32157899 32157913 3.29e-05 0.136 ccaggaggaggaggt
M4612_1.02 CTCFL chr2 + 86598505 86598519 3.29e-05 0.136 ccaggaggaggaggt
M4612_1.02 CTCFL chr20 - 45349252 45349266 3.33e-05 0.137 CCACAGGGGTGCACC
M4612_1.02 CTCFL chr19 - 40348357 40348371 3.36e-05 0.137 CCGGGAGGGAGGGCG
M4612_1.02 CTCFL chr20 - 3554415 3554429 3.41e-05 0.138 CTGGGAGGCGGAGCC
M4612_1.02 CTCFL chr1 - 64860230 64860244 3.74e-05 0.15 CCACGAGGAGGCCTT
M4612_1.02 CTCFL chr9 + 136000139 136000153 3.81e-05 0.152 CCGGTACAGGGCTCC
M4612_1.02 CTCFL chr19 - 41348703 41348717 3.91e-05 0.153 CCTGGAGGCGGAGGT
M4612_1.02 CTCFL chr13 + 33247119 33247133 3.91e-05 0.153 cctggaggcggaggt
M4612_1.02 CTCFL chr21 + 27260773 27260787 3.99e-05 0.155 cccccagaggaagca
M4612_1.02 CTCFL chr2 + 69950765 69950779 4.01e-05 0.155 ccaggaggtggagtt
M4612_1.02 CTCFL chr22 - 39870096 39870110 4.39e-05 0.167 CCAGGAGGCGGAGTT
M4612_1.02 CTCFL chr22 + 38768606 38768620 4.44e-05 0.167 ctgggagggggaggt
M4612_1.02 CTCFL chr12 + 53550246 53550260 4.44e-05 0.167 ctgggagggggaggt
M4612_1.02 CTCFL chr17 + 61838468 61838482 4.44e-05 0.167 ccaggaggcggaact
M4612_1.02 CTCFL chr19 - 40348639 40348653 4.5e-05 0.168 CCGGCGGGGGCCAGG
M4612_1.02 CTCFL chr5 - 139490340 139490354 4.7e-05 0.172 CCACCTGAGGTCGGG
M4612_1.02 CTCFL chr9 + 135985542 135985556 4.72e-05 0.172 CCGCCACTGGGCCCT
M4612_1.02 CTCFL chr6 - 107553517 107553531 4.74e-05 0.172 GCGACAGAGGGAGAC
M4612_1.02 CTCFL chr1 + 67699160 67699174 4.74e-05 0.172 gcgacagagggagac
M4612_1.02 CTCFL chr6 - 43088830 43088844 4.77e-05 0.172 GCACCAGGAGGAGGA
M4612_1.02 CTCFL chr10 + 68022355 68022369 4.8e-05 0.173 gggcaaggtggcgca
M4612_1.02 CTCFL chr19 + 40348776 40348790 4.89e-05 0.174 CGATCTGGGGGCGCG
M4612_1.02 CTCFL chr19 + 40348684 40348698 4.96e-05 0.174 CGGCTAGGAGGGGCC
M4612_1.02 CTCFL chr5 + 34182724 34182738 4.98e-05 0.174 CCACCAGAGGTTGGC
M4612_1.02 CTCFL chrX + 106544821 106544835 4.98e-05 0.174 ccgagaggaggaggt
M4612_1.02 CTCFL chr7 - 98598878 98598892 5.12e-05 0.178 CAGCCAGAGGTCTCC
M4612_1.02 CTCFL chr19 - 40348373 40348387 5.22e-05 0.179 CTGACAGTTGGCGCC
M4612_1.02 CTCFL chr1 + 52123929 52123943 5.24e-05 0.179 ccggctggaggtgca
M4612_1.02 CTCFL chr17 - 16407024 16407038 5.25e-05 0.179 CGACCCGGGAGCGCG
M4612_1.02 CTCFL chr16 - 30642248 30642262 5.27e-05 0.179 CCGGAAGGCGGAAGC
M4612_1.02 CTCFL chr10 - 73829106 73829120 5.31e-05 0.179 CCGCTTGAGGGCAGG
M4612_1.02 CTCFL chr9 - 135985462 135985476 5.46e-05 0.181 CCTCCAGGAAGCTCT
M4612_1.02 CTCFL chr10 - 22719860 22719874 5.5e-05 0.181 CCAGCCTGGGGCACA
M4612_1.02 CTCFL chr2 - 84993610 84993624 5.5e-05 0.181 CCAGCCTGGGGCACA
M4612_1.02 CTCFL chr5 + 13673095 13673109 5.56e-05 0.181 tcgggaggcggagct
M4612_1.02 CTCFL chr19 + 33821307 33821321 5.58e-05 0.181 CACGTGGGGGGCTCC
M4612_1.02 CTCFL chr18 - 48465570 48465584 5.64e-05 0.181 CCTCCAGGCAGAGCA
M4612_1.02 CTCFL chr21 - 35002309 35002323 5.66e-05 0.181 GCAGCTGGGGGTGCA
M4612_1.02 CTCFL chr17 + 9255724 9255738 5.66e-05 0.181 CAAACAGGGGGAGAC
M4612_1.02 CTCFL chr1 - 39986393 39986407 5.68e-05 0.181 CCAGAAGGCGGAGTT
M4612_1.02 CTCFL chr22 + 23143188 23143202 5.78e-05 0.182 gctgaagggggaggg
M4612_1.02 CTCFL chr16 + 30052936 30052950 5.8e-05 0.182 GCGGGCGGCGGCGGG
M4612_1.02 CTCFL chr12 + 111191252 111191266 5.8e-05 0.182 cccacagGGGTCATT
M4612_1.02 CTCFL chrX - 23772122 23772136 5.97e-05 0.186 ACACCAGGAGGCAGG
M4612_1.02 CTCFL chr17 - 35567573 35567587 5.99e-05 0.186 CAGGCAGGCGTCACC
M4612_1.02 CTCFL chr17 + 8078281 8078295 6.08e-05 0.186 actacaggcgccgcc
M4612_1.02 CTCFL chrX + 83164155 83164169 6.12e-05 0.186 ccaagaggtggaggt
M4612_1.02 CTCFL chr5 + 45172936 45172950 6.14e-05 0.186 cctcccgggttcgcg
M4612_1.02 CTCFL chr12 - 48866693 48866707 6.16e-05 0.186 CCGGGAGATGGAGGT
M4612_1.02 CTCFL chr19 + 4719250 4719264 6.16e-05 0.186 ccgggagatggaggt
M4612_1.02 CTCFL chr1 - 26904247 26904261 6.23e-05 0.187 CCGGCAGGCAGAGGT
M4612_1.02 CTCFL chr16 - 23593960 23593974 6.39e-05 0.188 CCGGGAGGCAGAGCT
M4612_1.02 CTCFL chr17 - 60753489 60753503 6.39e-05 0.188 CCGGGAGGCAGAGCT
M4612_1.02 CTCFL chr5 - 76779335 76779349 6.39e-05 0.188 CCGGGAGGCAGAGCT
M4612_1.02 CTCFL chr19 - 40348482 40348496 6.61e-05 0.194 CTCGCTGGTGGCGGC
M4612_1.02 CTCFL chr7 - 131707339 131707353 6.68e-05 0.194 CCAAGAGGCGGAGGT
M4612_1.02 CTCFL chr17 - 44700571 44700585 6.7e-05 0.194 CTGGGAGGTGGAGCT
M4612_1.02 CTCFL chr6 + 89778808 89778822 6.7e-05 0.194 ctgggaggtggagct
M4612_1.02 CTCFL chr22 - 38768947 38768961 6.82e-05 0.196 CATCAACGGGGCGCT
M4612_1.02 CTCFL chr9 + 130342161 130342175 6.85e-05 0.196 GCACCATGGGGCCTC
M4612_1.02 CTCFL chr19 - 40348672 40348686 6.92e-05 0.197 CCGCGCGCAGGCGCA
M4612_1.02 CTCFL chr12 + 57075310 57075324 7.17e-05 0.202 ccgggaagtggagct
M4612_1.02 CTCFL chr9 - 130342169 130342183 7.22e-05 0.202 CCTGCAGGGAGGCCC
M4612_1.02 CTCFL chr1 - 6404808 6404822 7.29e-05 0.202 CCGAGAGACGGAGCG
M4612_1.02 CTCFL chr1 - 100011798 100011812 7.32e-05 0.202 CTGGGAGGCGGAGCT
M4612_1.02 CTCFL chrX + 123770304 123770318 7.32e-05 0.202 ctgggaggcggagct
M4612_1.02 CTCFL chr1 + 155489680 155489694 7.32e-05 0.202 ctgggaggcggagct
M4612_1.02 CTCFL chr1 - 35380407 35380421 7.82e-05 0.214 CCGGGAAGCGGAGCT
M4612_1.02 CTCFL chr8 + 28291465 28291479 7.82e-05 0.214 ccgggaagcggagct
M4612_1.02 CTCFL chr17 + 35764131 35764145 7.99e-05 0.217 gcgacggagggcgag
M4612_1.02 CTCFL chr9 - 135985534 135985548 8.1e-05 0.217 GTGGCGGGTGGCGGC
M4612_1.02 CTCFL chr20 - 44880322 44880336 8.12e-05 0.217 ACGCTTGGTGGCGGG
M4612_1.02 CTCFL chr4 + 190111966 190111980 8.12e-05 0.217 atcgcagcgggcgcc
M4612_1.02 CTCFL chr1 - 6404903 6404917 8.41e-05 0.224 CCAAGAGATGACGCC
M4612_1.02 CTCFL chr13 - 49967773 49967787 8.56e-05 0.225 GCAACAGAGGGAGAC
M4612_1.02 CTCFL chr18 + 49439986 49440000 8.56e-05 0.225 gcaacagagggagac
M4612_1.02 CTCFL chr1 + 155489734 155489748 8.56e-05 0.225 gcaacagagggagac
M4612_1.02 CTCFL chr5 - 59594400 59594414 8.65e-05 0.226 CCGGGAGGCGGAAGT
M4612_1.02 CTCFL chr9 + 135985469 135985483 8.68e-05 0.226 CCTGGAGGTGGTGTC
M4612_1.02 CTCFL chr19 + 35882270 35882284 8.77e-05 0.227 ccaggagatggcagt
M4612_1.02 CTCFL chr9 + 130342132 130342146 9.01e-05 0.232 CCAGCATGTGGGGCT
M4612_1.02 CTCFL chr19 + 29506149 29506163 9.11e-05 0.233 CCAAGGGGAGGCACT
M4612_1.02 CTCFL chrX - 120579667 120579681 9.2e-05 0.235 CCTCCATGTGGGGCT
M4612_1.02 CTCFL chr1 + 16493052 16493066 9.33e-05 0.237 CCAGTAGTGGGAGGG
M4612_1.02 CTCFL chr10 - 35197532 35197546 9.36e-05 0.237 CCGGGAGGCCGAGCT
M4612_1.02 CTCFL chr19 - 40348392 40348406 9.49e-05 0.238 CGGGCCGGGGGAGGA
M4612_1.02 CTCFL chr17 + 35763819 35763833 9.49e-05 0.238 ccgtgaggcggaggt
M4612_1.02 CTCFL chr19 - 35921296 35921310 9.72e-05 0.242 GCCCCAGAGGTCGAG

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_40 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M4612_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_40 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZFP64.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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