******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZEB2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr9:35079774-35080274 1.0000 100 chr8:630793-631293 1.0000 100 chr17:58417377-58417877 1.0000 100 chr10:126247447-12624794 1.0000 100 chr6:90895482-90895982 1.0000 100 chr17:2399619-2400119 1.0000 100 chr5:43017841-43018341 1.0000 100 chr10:5548763-5549263 1.0000 100 chr6:90368966-90369466 1.0000 100 chr10:110210839-11021133 1.0000 100 chr1:80403332-80403832 1.0000 100 chr1:1615371-1615871 1.0000 100 chr1:228378503-228379003 1.0000 100 chr1:224929281-224929781 1.0000 100 chr7:116211190-116211690 1.0000 100 chr5:124747154-124747654 1.0000 100 chr19:44051583-44052083 1.0000 100 chr1:85297815-85298315 1.0000 100 chr20:41339855-41340355 1.0000 100 chr14:103333660-10333416 1.0000 100 chr17:79839559-79840059 1.0000 100 chr20:53828147-53828647 1.0000 100 chr1:161399457-161399957 1.0000 100 chr5:81422640-81423140 1.0000 100 chr21:36909854-36910354 1.0000 100 chr5:113203239-113203739 1.0000 100 chr15:75625526-75626026 1.0000 100 chr14:55027010-55027510 1.0000 100 chr5:66981751-66982251 1.0000 100 chr19:2529477-2529977 1.0000 100 chr1:1064101-1064601 1.0000 100 chr15:74374454-74374954 1.0000 100 chr1:228377636-228378136 1.0000 100 chr6:75524318-75524818 1.0000 100 chr19:40715554-40716054 1.0000 100 chr16:30021319-30021819 1.0000 100 chr1:232704711-232705211 1.0000 100 chr7:100673352-100673852 1.0000 100 chr19:35717070-35717570 1.0000 100 chr7:133492120-133492620 1.0000 100 chr12:49296674-49297174 1.0000 100 chr12:80187690-80188190 1.0000 100 chr12:104064189-10406468 1.0000 100 chr19:11344301-11344801 1.0000 100 chr14:64986737-64987237 1.0000 100 chr11:118252066-11825256 1.0000 100 chr12:806367-806867 1.0000 100 chr5:139517791-139518291 1.0000 100 chr10:110916481-11091698 1.0000 100 chrX:153319921-153320421 1.0000 100 chr16:29943959-29944459 1.0000 100 chr5:137754429-137754929 1.0000 100 chr7:70092372-70092872 1.0000 100 chr17:79993497-79993997 1.0000 100 chrX:41084835-41085335 1.0000 100 chr1:163321659-163322159 1.0000 100 chr12:50025358-50025858 1.0000 100 chr1:230978760-230979260 1.0000 100 chr1:3402109-3402609 1.0000 100 chr18:109161-109661 1.0000 100 chr6:27230315-27230815 1.0000 100 chr5:10601294-10601794 1.0000 100 chr11:9565894-9566394 1.0000 100 chr12:1592662-1593162 1.0000 100 chr6:49541148-49541648 1.0000 100 chr1:227563510-227564010 1.0000 100 chr17:81393857-81394357 1.0000 100 chr6:2021659-2022159 1.0000 100 chr18:50629060-50629560 1.0000 100 chr3:9396959-9397459 1.0000 100 chr1:70509856-70510356 1.0000 100 chr5:90547052-90547552 1.0000 100 chr11:27209517-27210017 1.0000 100 chr7:114530031-114530531 1.0000 100 chr19:1021412-1021912 1.0000 100 chr10:12720315-12720815 1.0000 100 chr14:32134486-32134986 1.0000 100 chr12:26274586-26275086 1.0000 100 chr8:350619-351119 1.0000 100 chr19:17305342-17305842 1.0000 100 chr16:25049569-25050069 1.0000 100 chr15:66386426-66386926 1.0000 100 chr1:237166630-237167130 1.0000 100 chr1:146051951-146052451 1.0000 100 chr8:10959981-10960481 1.0000 100 chr6:16712780-16713280 1.0000 100 chr7:74079296-74079796 1.0000 100 chr3:168974988-168975488 1.0000 100 chr19:17606085-17606585 1.0000 100 chr5:14580228-14580728 1.0000 100 chr10:63268977-63269477 1.0000 100 chr1:229558794-229559294 1.0000 100 chr3:194140644-194141144 1.0000 100 chr9:12814245-12814745 1.0000 100 chr12:110468295-11046879 1.0000 100 chr6:30717230-30717730 1.0000 100 chr17:64796454-64796954 1.0000 100 chr19:2236329-2236829 1.0000 100 chr14:31026549-31027049 1.0000 100 chr14:100192666-10019316 1.0000 100 chr6:125050651-125051151 1.0000 100 chr20:297173-297673 1.0000 100 chr3:172140718-172141218 1.0000 100 chr1:81032883-81033383 1.0000 100 chr7:98476712-98477212 1.0000 100 chr1:145465458-145465958 1.0000 100 chr22:35364154-35364654 1.0000 100 chr19:41884133-41884633 1.0000 100 chr3:157475986-157476486 1.0000 100 chr6:35259211-35259711 1.0000 100 chr1:16644413-16644913 1.0000 100 chr19:40602141-40602641 1.0000 100 chr17:45148442-45148942 1.0000 100 chr10:72800371-72800871 1.0000 100 chr19:8389767-8390267 1.0000 100 chr10:86283858-86284358 1.0000 100 chr14:30625483-30625983 1.0000 100 chr6:52482899-52483399 1.0000 100 chr19:38224230-38224730 1.0000 100 chr19:40348256-40348756 1.0000 100 chr22:42965005-42965505 1.0000 100 chr19:30662181-30662681 1.0000 100 chr1:233635918-233636418 1.0000 100 chr1:234612503-234613003 1.0000 100 chr1:30824005-30824505 1.0000 100 chr19:34734054-34734554 1.0000 100 chr1:228861081-228861581 1.0000 100 chr5:140295314-140295814 1.0000 100 chr7:158097521-158098021 1.0000 100 chr3:181328996-181329496 1.0000 100 chr8:25998525-25999025 1.0000 100 chr18:79832124-79832624 1.0000 100 chr12:54033407-54033907 1.0000 100 chr6:37819214-37819714 1.0000 100 chr6:169396219-169396719 1.0000 100 chr2:47176443-47176943 1.0000 100 chr6:2985908-2986408 1.0000 100 chr20:45972045-45972545 1.0000 100 chr4:118327841-118328341 1.0000 100 chr1:224623817-224624317 1.0000 100 chr7:73738815-73739315 1.0000 100 chr3:42819868-42820368 1.0000 100 chr5:59303198-59303698 1.0000 100 chr12:65169171-65169671 1.0000 100 chr14:20662864-20663364 1.0000 100 chr8:109611120-109611620 1.0000 100 chr1:225508441-225508941 1.0000 100 chr1:36464111-36464611 1.0000 100 chr11:47578692-47579192 1.0000 100 chr12:66169614-66170114 1.0000 100 chr9:86983548-86984048 1.0000 100 chr7:100335958-100336458 1.0000 100 chr18:105755-106255 1.0000 100 chr1:3403725-3404225 1.0000 100 chr17:1080712-1081212 1.0000 100 chr6:41787305-41787805 1.0000 100 chr7:149028585-149029085 1.0000 100 chr19:14217384-14217884 1.0000 100 chr10:73966173-73966673 1.0000 100 chr21:43857404-43857904 1.0000 100 chr4:128393120-128393620 1.0000 100 chr17:18087705-18088205 1.0000 100 chr12:89769185-89769685 1.0000 100 chr3:138833428-138833928 1.0000 100 chr12:106074973-10607547 1.0000 100 chr15:41230790-41231290 1.0000 100 chr14:101073134-10107363 1.0000 100 chr19:4575288-4575788 1.0000 100 chr2:177263377-177263877 1.0000 100 chr5:116766522-116767022 1.0000 100 chr5:136729877-136730377 1.0000 100 chr7:114417991-114418491 1.0000 100 chr12:54052026-54052526 1.0000 100 chr1:225653577-225654077 1.0000 100 chr22:29388219-29388719 1.0000 100 chr16:71808725-71809225 1.0000 100 chr1:155017285-155017785 1.0000 100 chr1:220089696-220090196 1.0000 100 chr3:71102146-71102646 1.0000 100 chr13:113557054-11355755 1.0000 100 chr14:24366893-24367393 1.0000 100 chr1:198763233-198763733 1.0000 100 chr6:125913869-125914369 1.0000 100 chr2:46481535-46482035 1.0000 100 chr6:125956558-125957058 1.0000 100 chr19:45265298-45265798 1.0000 100 chr20:35954209-35954709 1.0000 100 chr5:66144151-66144651 1.0000 100 chr6:159726771-159727271 1.0000 100 chr10:35195673-35196173 1.0000 100 chr10:3197576-3198076 1.0000 100 chr11:36149639-36150139 1.0000 100 chr19:10416622-10417122 1.0000 100 chr1:28736455-28736955 1.0000 100 chr10:121831744-12183224 1.0000 100 chr11:69498446-69498946 1.0000 100 chr5:154754791-154755291 1.0000 100 chr1:10210048-10210548 1.0000 100 chr22:19984259-19984759 1.0000 100 chr15:69414086-69414586 1.0000 100 chr16:3152414-3152914 1.0000 100 chr2:70142558-70143058 1.0000 100 chr21:32771761-32772261 1.0000 100 chr1:211258758-211259258 1.0000 100 chr9:138149930-138150430 1.0000 100 chr16:1782541-1783041 1.0000 100 chr1:226122527-226123027 1.0000 100 chr6:47477379-47477879 1.0000 100 chr13:113592990-11359349 1.0000 100 chr17:81926645-81927145 1.0000 100 chr20:50731018-50731518 1.0000 100 chr19:55259040-55259540 1.0000 100 chr7:151426360-151426860 1.0000 100 chr10:22552816-22553316 1.0000 100 chr19:40219726-40220226 1.0000 100 chr10:22229190-22229690 1.0000 100 chr12:25333765-25334265 1.0000 100 chr10:122980266-12298076 1.0000 100 chr19:10333076-10333576 1.0000 100 chrX:41333190-41333690 1.0000 100 chr1:15675655-15676155 1.0000 100 chr8:22244962-22245462 1.0000 100 chr1:228781105-228781605 1.0000 100 chr1:59214647-59215147 1.0000 100 chr1:225655408-225655908 1.0000 100 chr17:17280818-17281318 1.0000 100 chr16:10743651-10744151 1.0000 100 chr5:181222133-181222633 1.0000 100 chr1:244970837-244971337 1.0000 100 chr3:184249516-184250016 1.0000 100 chr1:228139833-228140333 1.0000 100 chr22:37905006-37905506 1.0000 100 chr12:8082009-8082509 1.0000 100 chr1:183060420-183060920 1.0000 100 chr16:73070478-73070978 1.0000 100 chr1:1340850-1341350 1.0000 100 chr10:102151944-10215244 1.0000 100 chr20:53609848-53610348 1.0000 100 chr5:67015615-67016115 1.0000 100 chr19:267138-267638 1.0000 100 chr1:1658897-1659397 1.0000 100 chr7:148339258-148339758 1.0000 100 chr5:61408472-61408972 1.0000 100 chr19:36331438-36331938 1.0000 100 chr15:65610913-65611413 1.0000 100 chr10:71266277-71266777 1.0000 100 chr17:78840911-78841411 1.0000 100 chr19:8529392-8529892 1.0000 100 chr17:68511915-68512415 1.0000 100 chr17:59619512-59620012 1.0000 100 chr15:96356870-96357370 1.0000 100 chr16:2915981-2916481 1.0000 100 chr6:89977823-89978323 1.0000 100 chr9:1458422-1458922 1.0000 100 chr16:28863267-28863767 1.0000 100 chr22:37607020-37607520 1.0000 100 chr1:244665794-244666294 1.0000 100 chr1:226062591-226063091 1.0000 100 chr5:69521095-69521595 1.0000 100 chr12:95217702-95218202 1.0000 100 chr15:71747481-71747981 1.0000 100 chr16:46883816-46884316 1.0000 100 chr17:42017346-42017846 1.0000 100 chr4:173252283-173252783 1.0000 100 chr17:82458140-82458640 1.0000 100 chr16:2682164-2682664 1.0000 100 chr18:48998082-48998582 1.0000 100 chr10:3420689-3421189 1.0000 100 chr10:133764448-13376494 1.0000 100 chr1:110338217-110338717 1.0000 100 chr10:12448696-12449196 1.0000 100 chr19:38374258-38374758 1.0000 100 chr22:24727040-24727540 1.0000 100 chr16:2251631-2252131 1.0000 100 chr5:124908856-124909356 1.0000 100 chr2:65432450-65432950 1.0000 100 chr22:41832539-41833039 1.0000 100 chr5:140174969-140175469 1.0000 100 chr6:1630614-1631114 1.0000 100 chr12:68808674-68809174 1.0000 100 chr10:7302362-7302862 1.0000 100 chr16:30558208-30558708 1.0000 100 chr6:158040348-158040848 1.0000 100 chr13:41061235-41061735 1.0000 100 chr6:151452090-151452590 1.0000 100 chr2:178414743-178415243 1.0000 100 chr1:229221406-229221906 1.0000 100 chr21:37267378-37267878 1.0000 100 chr16:4944707-4945207 1.0000 100 chr10:17228359-17228859 1.0000 100 chr5:14156492-14156992 1.0000 100 chr17:46101218-46101718 1.0000 100 chr22:38701219-38701719 1.0000 100 chr10:665558-666058 1.0000 100 chr5:180861295-180861795 1.0000 100 chr17:77233818-77234318 1.0000 100 chr11:59550340-59550840 1.0000 100 chr5:92552235-92552735 1.0000 100 chr19:36139782-36140282 1.0000 100 chr10:72354661-72355161 1.0000 100 chr13:50357564-50358064 1.0000 100 chr13:113617269-11361776 1.0000 100 chr16:31033046-31033546 1.0000 100 chr17:67978522-67979022 1.0000 100 chr16:29807629-29808129 1.0000 100 chr11:65570034-65570534 1.0000 100 chr5:116574671-116575171 1.0000 100 chr5:56123693-56124193 1.0000 100 chr1:228457444-228457944 1.0000 100 chr16:1271724-1272224 1.0000 100 chr20:61218123-61218623 1.0000 100 chr19:42268143-42268643 1.0000 100 chr5:176388724-176389224 1.0000 100 chr6:28589245-28589745 1.0000 100 chr9:131373536-131374036 1.0000 100 chr16:30430003-30430503 1.0000 100 chr8:144222665-144223165 1.0000 100 chr10:1048899-1049399 1.0000 100 chr5:175378373-175378873 1.0000 100 chr8:33513426-33513926 1.0000 100 chr14:22982558-22983058 1.0000 100 chr8:89984242-89984742 1.0000 100 chr17:7484232-7484732 1.0000 100 chr19:29696185-29696685 1.0000 100 chr1:182616088-182616588 1.0000 100 chr1:67686545-67687045 1.0000 100 chr16:30065114-30065614 1.0000 100 chr1:8626333-8626833 1.0000 100 chr17:71438646-71439146 1.0000 100 chr20:44728734-44729234 1.0000 100 chr8:37359491-37359991 1.0000 100 chr17:48492603-48493103 1.0000 100 chr13:113594047-11359454 1.0000 100 chr1:30270390-30270890 1.0000 100 chr12:122965999-12296649 1.0000 100 chr5:43064755-43065255 1.0000 100 chr20:43657246-43657746 1.0000 100 chr8:125429953-125430453 1.0000 100 chr1:28648615-28649115 1.0000 100 chrX:24054434-24054934 1.0000 100 chr10:5889780-5890280 1.0000 100 chr20:50165950-50166450 1.0000 100 chr11:111879070-11187957 1.0000 100 chr15:70526450-70526950 1.0000 100 chr17:60392113-60392613 1.0000 100 chr19:35510297-35510797 1.0000 100 chr8:37380738-37381238 1.0000 100 chr1:113904944-113905444 1.0000 100 chr5:124740951-124741451 1.0000 100 chr5:5340266-5340766 1.0000 100 chr22:19168243-19168743 1.0000 100 chr19:33176893-33177393 1.0000 100 chr1:89524960-89525460 1.0000 100 chr9:137494516-137495016 1.0000 100 chr16:1826890-1827390 1.0000 100 chr1:161765015-161765515 1.0000 100 chr5:69369417-69369917 1.0000 100 chr12:89352463-89352963 1.0000 100 chr7:3582070-3582570 1.0000 100 chr5:180293516-180294016 1.0000 100 chr7:80883509-80884009 1.0000 100 chr1:228902922-228903422 1.0000 100 chr1:220119010-220119510 1.0000 100 chr1:159916143-159916643 1.0000 100 chr21:45433808-45434308 1.0000 100 chr12:53321297-53321797 1.0000 100 chr1:175470992-175471492 1.0000 100 chr16:30526872-30527372 1.0000 100 chr16:11915938-11916438 1.0000 100 chr14:99821640-99822140 1.0000 100 chr1:41870086-41870586 1.0000 100 chr19:39390760-39391260 1.0000 100 chr17:45320830-45321330 1.0000 100 chrX:724739-725239 1.0000 100 chr16:89142413-89142913 1.0000 100 chr1:233624200-233624700 1.0000 100 chr17:82359880-82360380 1.0000 100 chr8:25458842-25459342 1.0000 100 chr16:29816011-29816511 1.0000 100 chr19:40444377-40444877 1.0000 100 chr9:93671043-93671543 1.0000 100 chr5:181173615-181174115 1.0000 100 chr18:28156293-28156793 1.0000 100 chr13:112346328-11234682 1.0000 100 chr19:40623694-40624194 1.0000 100 chr1:148263221-148263721 1.0000 100 chr13:41696511-41697011 1.0000 100 chr5:88516271-88516771 1.0000 100 chrX:73943909-73944409 1.0000 100 chr17:83050631-83051131 1.0000 100 chr21:46324007-46324507 1.0000 100 chr12:12398110-12398610 1.0000 100 chr6:79078081-79078581 1.0000 100 chr13:110870151-11087065 1.0000 100 chr16:12120415-12120915 1.0000 100 chr8:37360408-37360908 1.0000 100 chr12:45728640-45729140 1.0000 100 chr19:40831774-40832274 1.0000 100 chr1:2683919-2684419 1.0000 100 chr19:38336469-38336969 1.0000 100 chr6:27688060-27688560 1.0000 100 chr10:23408465-23408965 1.0000 100 chr19:32373695-32374195 1.0000 100 chr10:21525530-21526030 1.0000 100 chr6:125946184-125946684 1.0000 100 chr1:234975036-234975536 1.0000 100 chr16:14974646-14975146 1.0000 100 chr6:2028584-2029084 1.0000 100 chr5:6419324-6419824 1.0000 100 chr14:104777105-10477760 1.0000 100 chr19:47243994-47244494 1.0000 100 chr17:75035161-75035661 1.0000 100 chr6:56529631-56530131 1.0000 100 chr16:25257934-25258434 1.0000 100 chr1_KI270713v1_random:2 1.0000 100 chr3:194134780-194135280 1.0000 100 chr1:26620537-26621037 1.0000 100 chr10:102917542-10291804 1.0000 100 chr10:68153504-68154004 1.0000 100 chr22:40711465-40711965 1.0000 100 chr12:117128158-11712865 1.0000 100 chr8:1857948-1858448 1.0000 100 chr1:229221205-229221705 1.0000 100 chr12:64759338-64759838 1.0000 100 chr5:69217700-69218200 1.0000 100 chr19:18364910-18365410 1.0000 100 chr19:36572896-36573396 1.0000 100 chr15:72231135-72231635 1.0000 100 chr19:40920950-40921450 1.0000 100 chr19:36604733-36605233 1.0000 100 chr20:18507407-18507907 1.0000 100 chr1:233112894-233113394 1.0000 100 chr15:98896820-98897320 1.0000 100 chr13:45464662-45465162 1.0000 100 chr9:18976694-18977194 1.0000 100 chr5:124908645-124909145 1.0000 100 chr19:38831699-38832199 1.0000 100 chr5:1950698-1951198 1.0000 100 chr16:86338153-86338653 1.0000 100 chr10:72272694-72273194 1.0000 100 chr20:5112973-5113473 1.0000 100 chr10:93209008-93209508 1.0000 100 chr14:103520822-10352132 1.0000 100 chr1:148522485-148522985 1.0000 100 chr2:241572836-241573336 1.0000 100 chr10:7311206-7311706 1.0000 100 chr17:83096357-83096857 1.0000 100 chr3:9731309-9731809 1.0000 100 chr6:27545445-27545945 1.0000 100 chr21:33541826-33542326 1.0000 100 chr1:225999231-225999731 1.0000 100 chr13:27990684-27991184 1.0000 100 chr15:66497593-66498093 1.0000 100 chr19:37655790-37656290 1.0000 100 chr10:87845974-87846474 1.0000 100 chr5:1844655-1845155 1.0000 100 chr8:320015-320515 1.0000 100 chr1:234700155-234700655 1.0000 100 chr6:149545919-149546419 1.0000 100 chr5:81169870-81170370 1.0000 100 chr12:121672249-12167274 1.0000 100 chr13:113625814-11362631 1.0000 100 chr17:48626374-48626874 1.0000 100 chr11:68459812-68460312 1.0000 100 chr1:22260763-22261263 1.0000 100 chr6:30717025-30717525 1.0000 100 chr12:124939262-12493976 1.0000 100 chr5:96934819-96935319 1.0000 100 chr12:56041729-56042229 1.0000 100 chr9:135563163-135563663 1.0000 100 chr19:1383415-1383915 1.0000 100 chr19:2636761-2637261 1.0000 100 chr1:16122829-16123329 1.0000 100 chr4:105708461-105708961 1.0000 100 chr8:37479254-37479754 1.0000 100 chr19:14267194-14267694 1.0000 100 chr17:3890017-3890517 1.0000 100 chr19:41926073-41926573 1.0000 100 chr17:75904861-75905361 1.0000 100 chr1:226186571-226187071 1.0000 100 chr1:12478104-12478604 1.0000 100 chrX:41084635-41085135 1.0000 100 chr12:45727442-45727942 1.0000 100 chr1:236168919-236169419 1.0000 100 chr15:70494074-70494574 1.0000 100 chr11:694060-694560 1.0000 100 chr21:46286089-46286589 1.0000 100 chr10:7818105-7818605 1.0000 100 chr1:40691599-40692099 1.0000 100 chr17:45449586-45450086 1.0000 100 chr19:11210445-11210945 1.0000 100 chr7:80876837-80877337 1.0000 100 chr19:34218155-34218655 1.0000 100 chr5:124735010-124735510 1.0000 100 chr13:35762896-35763396 1.0000 100 chr8:37393026-37393526 1.0000 100 chr1:1000651-1001151 1.0000 100 chr7:116218163-116218663 1.0000 100 chr9:85743228-85743728 1.0000 100 chr5:17305900-17306400 1.0000 100 chr10:72204280-72204780 1.0000 100 chr1:16132643-16133143 1.0000 100 chr5:149551454-149551954 1.0000 100 chr17:60173283-60173783 1.0000 100 chr14:105567443-10556794 1.0000 100 chr10:133057992-13305849 1.0000 100 chr17:15999373-15999873 1.0000 100 chr21:36257658-36258158 1.0000 100 chr13:113493265-11349376 1.0000 100 chr16:30698087-30698587 1.0000 100 chr3:194089467-194089967 1.0000 100 chr1:235504692-235505192 1.0000 100 chr1:244970638-244971138 1.0000 100 chr15:67792434-67792934 1.0000 100 chr9:128656624-128657124 1.0000 100 chr19:39409313-39409813 1.0000 100 chr10:72320644-72321144 1.0000 100 chr21:39313509-39314009 1.0000 100 chr12:132237196-13223769 1.0000 100 chr12:49060537-49061037 1.0000 100 chr8:37302610-37303110 1.0000 100 chr16:4253949-4254449 1.0000 100 chr12:122266239-12226673 1.0000 100 chr1:145280990-145281490 1.0000 100 chr5:181173412-181173912 1.0000 100 chr21:29217744-29218244 1.0000 100 chr16:15590836-15591336 1.0000 100 chr15:74546088-74546588 1.0000 100 chr3:49021613-49022113 1.0000 100 chr19:9858697-9859197 1.0000 100 chr8:350416-350916 1.0000 100 chr1:212608392-212608892 1.0000 100 chr6:82260184-82260684 1.0000 100 chr13:113666022-11366652 1.0000 100 chr10:75379166-75379666 1.0000 100 chr5:81169653-81170153 1.0000 100 chr16:29805396-29805896 1.0000 100 chr6:150418293-150418793 1.0000 100 chr2:241572635-241573135 1.0000 100 chr6:27602243-27602743 1.0000 100 chr10:63707207-63707707 1.0000 100 chr5:1157496-1157996 1.0000 100 chr19:41925133-41925633 1.0000 100 chr7:100081637-100082137 1.0000 100 chr13:113624851-11362535 1.0000 100 chr1:209770546-209771046 1.0000 100 chr17:8173279-8173779 1.0000 100 chr1:148264728-148265228 1.0000 100 chr1:234723935-234724435 1.0000 100 chr19:37594320-37594820 1.0000 100 chr17:78558322-78558822 1.0000 100 chr1:93078949-93079449 1.0000 100 chr1:16132442-16132942 1.0000 100 chr1:155244567-155245067 1.0000 100 chr14:90383123-90383623 1.0000 100 chr8:1378144-1378644 1.0000 100 chr20:31723574-31724074 1.0000 100 chr16:86337953-86338453 1.0000 100 chr19:42242804-42243304 1.0000 100 chr1:186375319-186375819 1.0000 100 chr1:17675868-17676368 1.0000 100 chr1:839323-839823 1.0000 100 chr1:214439432-214439932 1.0000 100 chr10:1571857-1572357 1.0000 100 chr12:12266907-12267407 1.0000 100 chr13:113556852-11355735 1.0000 100 chr10:131850812-13185131 1.0000 100 chr16:71426515-71427015 1.0000 100 chr12:132429745-13243024 1.0000 100 chr17:82359675-82360175 1.0000 100 chr14:105567243-10556774 1.0000 100 chr6:169396020-169396520 1.0000 100 chr1:236097029-236097529 1.0000 100 chr7:98548317-98548817 1.0000 100 chr8:144222437-144222937 1.0000 100 chr20:63815608-63816108 1.0000 100 chr5:1545403-1545903 1.0000 100 chr1:53555949-53556449 1.0000 100 chr22:44730992-44731492 1.0000 100 chr11:71448046-71448546 1.0000 100 chr4:622624-623124 1.0000 100 chr13:113624643-11362514 1.0000 100 chr10:133057792-13305829 1.0000 100 chr13:33542523-33543023 1.0000 100 chr9:93672479-93672979 1.0000 100 chr19:11210110-11210610 1.0000 100 chr1:53555724-53556224 1.0000 100 chr11:3257415-3257915 1.0000 100 chr1:1123802-1124302 1.0000 100 chr10:1571658-1572158 1.0000 100 chr19:11209870-11210370 1.0000 100 chr20:63815398-63815898 1.0000 100 chr1:230588390-230588890 1.0000 100 chr7:98548102-98548602 1.0000 100 chr1:27668893-27669393 1.0000 100 chr14:99551250-99551750 1.0000 100 chr1:17675618-17676118 1.0000 100 chr20:52424130-52424630 1.0000 100 chr1:1123592-1124092 1.0000 100 chr16:90032082-90032582 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZEB2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZEB2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/meme_out -mod zoops -nmotifs 3 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZEB2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 3 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.224 C 0.276 G 0.276 T 0.224 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZEB2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background): A 0.223 C 0.277 G 0.277 T 0.223 ******************************************************************************** ******************************************************************************** MOTIF KGTRGRKGTGTGTGCAGGTGWG MEME-1 width = 22 sites = 75 llr = 1113 E-value = 1.7e-159 ******************************************************************************** -------------------------------------------------------------------------------- Motif KGTRGRKGTGTGTGCAGGTGWG MEME-1 Description -------------------------------------------------------------------------------- Simplified A 111614:2:31212:91::333 pos.-specific C ::3:2:::1:::118:::::1: probability G 49145648373827:19a:727 matrix T 4:5:2:6:6:6:6:2:::a:5: bits 2.2 * 2.0 * * 1.7 * ** 1.5 **** Relative 1.3 * * **** Entropy 1.1 * * * * * ****** * (21.4 bits) 0.9 * * *** * * ****** * 0.7 * * ******* ****** * 0.4 **** ***************** 0.2 ********************** 0.0 ---------------------- Multilevel GGTAGGTGTGTGTGCAGGTGTG consensus T CGCAG GAGAG T AAA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGTRGRKGTGTGTGCAGGTGWG MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr5:1545403-1545903 - 39 5.83e-12 CAGGTGTGTG TGTAGGTATGTGTGCAGGTGTG TGCAGAGGTA chr14:99551250-99551750 + 50 5.39e-11 gaaggcagtg tgcaggtgggtgtgcaggtgag tacgtgagtg chr1:1340850-1341350 - 42 5.39e-11 CAGGCGTGCG TGTGCAGGTGTGTGCAGGTGTG CCTGTGTGCA chr1:53555724-53556224 + 31 8.25e-11 GTGTACTGCA GGTATGTGTGTGTGCAGGTATA CTGCAGGTGT chr1:17675618-17676118 + 31 2.26e-10 caggtgtggg tgcaggtgtgggtacaggtgtg ggtgcaggtg chr1:53555949-53556449 + 8 2.74e-10 CTGCAGC TGTGTGTGTGTATGCAGGTGTA CTGTAGGTTT chr20:61218123-61218623 + 8 5.61e-10 gtgtaga tgcaggtgtaggtgcaggtgta ggtgcaggtg chr10:133057792-13305829 + 27 7.87e-10 GGGCCCCGCA GGTGAGGGTATGTGCAGGTGAG GGACCGGGCA chr10:133057992-13305849 + 35 7.87e-10 GGGCCCCGCA GGTGAGGGTATGTGCAGGTGAG GGACTGGGCA chr19:2636761-2637261 - 66 7.87e-10 GTGCAGTGGG TGTGCAGGTGGGTGCAGGTGAG GACAAGTGGA chr13:113556852-11355735 + 4 9.32e-10 gtg tacaggtgtgtgtacaggtgtg tgtgtacagt chr13:113557054-11355755 + 27 9.32e-10 ggtgtgtcca ggtatgtgtgtgtgcaagtgta atgtccctca chr16:90032082-90032582 + 50 1.10e-09 TGAGCAGGAG TGTACAGGTATGTACAGGTGAG GAGGTGTGGT chr8:144222437-144222937 + 46 1.10e-09 caggcatagg tgtggatgtgggtgcaggtagg tacagatgca chr1:17675868-17676368 + 19 1.52e-09 caggcatggg tgcgggtgtaggtgcaggtgta cgtgcaggca chr10:1571857-1572357 + 65 1.78e-09 caggtgagta ggcaggtgagtgtgcaggtgag tggacaggtg chr13:35762896-35763396 - 29 1.78e-09 TAGGTGTGTA TGCGTAGGTGTGTGTAGGTGTG TATAGGTGTG chr1:230588390-230588890 + 52 2.78e-09 TGTGTGGATA AGTAGGTGGGTGTGTAGGTAAG TAGATAGGTG chr1:22260763-22261263 + 3 2.78e-09 TG TGTACGTGTACGTGCAGGTGTG CGGCAAGTGT chr10:86283858-86284358 - 5 3.22e-09 TGTAGGTGCT GGTATGTGTGAGGGCAGGTATG TATA chr12:132429745-13243024 - 23 8.47e-09 TTCCCAGGTG TGTGCAGGTGTGCCCAGGTGTG TGCCGATGTG chr10:131850812-13185131 - 10 8.47e-09 TATGTGTAGG TGGAAAGGTGTGTGCAGGTGGA AAGGTGTGT chr1:1123592-1124092 - 65 9.64e-09 CAGGAGTGTG TGCAGGTGTGTGCTCAGGTGTG TGCTCAAGTG chr12:132237196-13223769 - 2 9.64e-09 AGAAGGTGTA GGCAGGTGTTTGGGCAGGTGTG A chr5:1844655-1845155 - 75 9.64e-09 CAGG TGTAGGTGCAGGTGTAGGTGAG GTGTCGGCAT chr11:69498446-69498946 + 56 1.10e-08 GAGGGGTGCA GGTGAAGGTATGTGCAAGTGTG GGTAGGTGGA chr1:839323-839823 - 1 1.24e-08 TGTGTGTGTC TACGTGTGTGTGTCCAGGTGTG chr16:89142413-89142913 - 1 1.24e-08 TGTGCCTGCA GGTGTAGGTGTCTGCAGGTGTG chr20:52424130-52424630 - 48 1.41e-08 AGTGAAGGTG GGTGCAGGTAGGTACAGGTGAG TGAAGGTGGG chr13:27990684-27991184 + 44 1.59e-08 taggtatagg tgtaggtatatgtataggtata ggtatatgta chr18:79832124-79832624 - 42 1.59e-08 CAGGTGAGGA TGGGCAGGTGAGTGCAGGTGAG GATGGACAGG chr8:320015-320515 + 58 2.56e-08 TGTGTACGTC TAGGTGTGTGTGTCCAGGTGTG TGTGTCTAGG chr9:93672479-93672979 + 6 3.21e-08 GGAGG TACAGGTGTAGATGCAGGTATG GGTATAGGAG chr1:16132643-16133143 + 62 4.96e-08 ACAGGTATCG GGGAGAGGTGGGCACAGGTGTA GAGGAGGTGG chr1:209770546-209771046 + 54 5.52e-08 TGTGCATATG GAGGTGTGTGTGTGCAGGTGGA GGTGTGTGTC chr9:135563163-135563663 + 10 5.52e-08 aggtgggca ggtgggtaggtgggtaggtata caggtggaca chr1:1123802-1124302 - 46 6.13e-08 CAGTGGTGTG CGCAGGTGTGTGCACAGGTGTG TGGCGTGTGT chr11:71448046-71448546 - 62 6.13e-08 AGCGAGGCCA GGGGAAGGTGGGCGCAGGTGAG GGGCCGAGGT chr5:1157496-1157996 - 37 6.13e-08 TGAGCAGATG AGAACAGGTGTGAGCAGGTGTG GGCAGGTGGC chr9:93671043-93671543 + 4 6.13e-08 AGG TGTAGATGCAGGTGCGGGTGTG GGAGTAGGCA chr19:11209870-11210370 - 40 7.52e-08 AGAGTGGACA GGTAAGGGGATAGACAGGTGAG AGGTGGACAG chr17:64796454-64796954 - 25 8.31e-08 CAGATGGTTA GGTGGATGGGTAGGTAGGTAGG TGAATGAGCA chr1:236168919-236169419 + 60 1.12e-07 CCACtgcagg tgcaggtgcaggtgcaggtgca ggtgcaggtg chr19:38224230-38224730 - 12 1.12e-07 GCCATGCGTG GGCGTGTGCGAGTCCAGGTGTG CATGTGGTTG chr20:63815608-63816108 + 37 1.48e-07 GCACAGGTGC AGTGAGTGCAGGTGCAGGTGGG CGCAGGTCCA chr1:15675655-15676155 - 19 1.48e-07 CAGGCAGATA GGTAGGTAGGTAGGTAGGTAGG CAGGCAGATA chr14:30625483-30625983 + 19 1.48e-07 tataggtata ggtatataggtatataggtata taggtatatC chr10:3420689-3421189 + 9 1.63e-07 aggtgaga tgcaggtagggacgcaggtggg atgcaggtgg chr19:45265298-45265798 + 75 1.63e-07 AAGAAGTGCA GGTATAAGGGTGCCCAGGTGTG GGGT chr17:45449586-45450086 - 75 1.78e-07 GTTA GGTGGATGGATAGGTAGGTAGG TGAATGAGCA chr10:1571658-1572158 + 1 2.13e-07 . tgcaggtgagtgtgcaggcgag taggcaggtg chr8:350416-350916 + 35 2.13e-07 aaagcaggta ggtaggtagataggcaggtaga caggtaggta chr7:98548102-98548602 - 57 2.33e-07 CAGGTACATA GATAGGTAGGTAGGCAGGTAAA TAGGTAGCTA chr8:144222665-144223165 + 44 2.33e-07 caggtacaga tgtggaggtaggtccaggtaca ggtgtggatt chr1:16132442-16132942 + 48 2.77e-07 ACAGGTATTG AGGACAGGTGGGCACAGGTGTA GAGGAGGTGG chr1:27668893-27669393 - 3 3.02e-07 CAGGTAAGGA TGCGGGTAAGGATGCAGGTAAG GG chr19:39409313-39409813 + 44 3.02e-07 GCCGTTCACC TGAAAGGGTGGGACCAGGTGAG GTCACCAGAT chr19:11210445-11210945 - 28 3.28e-07 GGGGTAGATA GGTAAAGGGGTGGACAGATGAG GGGATAGACA chr17:83050631-83051131 + 22 3.28e-07 AGGTGTgcac ggcaggtgcacgggcaggtatg gggcacgggc chr5:116574671-116575171 + 77 3.28e-07 GGAGAGCTGT GGTGTATGTGAGTGCGAGTGAG CG chr7:98548317-98548817 - 66 3.57e-07 TAGGTAGGCA GGTAGATAGGTAAGTAGGTAGG CAGCCAGGTA chr20:63815398-63815898 + 40 4.93e-07 aggtgcagtg ggtacaggtgggcataggtgca gtgagtgcag chr19:11210110-11210610 - 7 5.77e-07 TAAGGAGACA GGTGAAGGGATGGCCAAGTGAG ATGAAC chr8:350619-351119 + 18 7.26e-07 caagcaggta agtaggtaggtaagtaggtagg agggtgggta chr8:1378144-1378644 - 23 9.07e-07 GTGTGTGGCA AGGACAGGTGAGGTCAGGTGTG TGCAGGACAG chr3:194134780-194135280 - 66 9.07e-07 AGGATGTGTG TGTGCGTGCGTGTGTGAGTGAG TGTGTGTGCG chr21:45433808-45434308 + 48 9.07e-07 AGGTGCATGG GCCAGGTGTGTGAGCAGGTGCA TGGGCCAGGT chr13:113617269-11361776 - 46 9.07e-07 CGGCTCTGCA GGTGAATGGTTCTGCAGGTGAA GGGCTCTGCA chr20:41339855-41340355 - 31 9.07e-07 ACTGCGGGAG GGGACAGGTGAGCCCAGGTGCG CCGAGGCACG chr1:30270390-30270890 - 42 1.05e-06 GCAGGCAGGT AGTAGGTGGGCAGACAGGTAGG AGGTGGGCAG chr21:36257658-36258158 + 42 1.29e-06 ggtaggtaga tgtaggtaggtagatagatgta ggtacgtagg chr1:233624200-233624700 - 35 2.34e-06 AGGCCAGGTG AAGATAGGTGAGGCCAGGTGAA GACAGATGTT chr8:10959981-10960481 + 76 2.82e-06 aggtgcaggt atagcaggtgggtgcaggtata gca chr11:47578692-47579192 - 36 4.28e-06 GCTCCGGGAT GAAAGGAGGGAACGCAGGTGAG AAAGCGAGAC chr1:40691599-40692099 + 60 4.79e-06 CCTGGACTCC TGAGCAGAGGTGTGTGAGTGTG CGGGAGTTTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGTRGRKGTGTGTGCAGGTGWG MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:1545403-1545903 5.8e-12 38_[-1]_40 chr14:99551250-99551750 5.4e-11 49_[+1]_29 chr1:1340850-1341350 5.4e-11 41_[-1]_37 chr1:53555724-53556224 8.3e-11 30_[+1]_48 chr1:17675618-17676118 2.3e-10 30_[+1]_48 chr1:53555949-53556449 2.7e-10 7_[+1]_71 chr20:61218123-61218623 5.6e-10 7_[+1]_71 chr10:133057792-13305829 7.9e-10 26_[+1]_52 chr10:133057992-13305849 7.9e-10 34_[+1]_44 chr19:2636761-2637261 7.9e-10 65_[-1]_13 chr13:113556852-11355735 9.3e-10 3_[+1]_75 chr13:113557054-11355755 9.3e-10 26_[+1]_52 chr16:90032082-90032582 1.1e-09 49_[+1]_29 chr8:144222437-144222937 1.1e-09 45_[+1]_33 chr1:17675868-17676368 1.5e-09 18_[+1]_60 chr10:1571857-1572357 1.8e-09 64_[+1]_14 chr13:35762896-35763396 1.8e-09 28_[-1]_50 chr1:230588390-230588890 2.8e-09 51_[+1]_27 chr1:22260763-22261263 2.8e-09 2_[+1]_76 chr10:86283858-86284358 3.2e-09 4_[-1]_74 chr12:132429745-13243024 8.5e-09 22_[-1]_56 chr10:131850812-13185131 8.5e-09 9_[-1]_69 chr1:1123592-1124092 9.6e-09 64_[-1]_14 chr12:132237196-13223769 9.6e-09 1_[-1]_77 chr5:1844655-1845155 9.6e-09 74_[-1]_4 chr11:69498446-69498946 1.1e-08 55_[+1]_23 chr1:839323-839823 1.2e-08 [-1]_78 chr16:89142413-89142913 1.2e-08 [-1]_78 chr20:52424130-52424630 1.4e-08 47_[-1]_31 chr13:27990684-27991184 1.6e-08 43_[+1]_35 chr18:79832124-79832624 1.6e-08 41_[-1]_37 chr8:320015-320515 2.6e-08 57_[+1]_21 chr9:93672479-93672979 3.2e-08 5_[+1]_73 chr1:16132643-16133143 5e-08 61_[+1]_17 chr1:209770546-209771046 5.5e-08 53_[+1]_25 chr9:135563163-135563663 5.5e-08 9_[+1]_69 chr1:1123802-1124302 6.1e-08 45_[-1]_33 chr11:71448046-71448546 6.1e-08 61_[-1]_17 chr5:1157496-1157996 6.1e-08 36_[-1]_42 chr9:93671043-93671543 6.1e-08 3_[+1]_75 chr19:11209870-11210370 7.5e-08 39_[-1]_39 chr17:64796454-64796954 8.3e-08 24_[-1]_54 chr1:236168919-236169419 1.1e-07 59_[+1]_19 chr19:38224230-38224730 1.1e-07 11_[-1]_67 chr20:63815608-63816108 1.5e-07 36_[+1]_42 chr1:15675655-15676155 1.5e-07 18_[-1]_60 chr14:30625483-30625983 1.5e-07 18_[+1]_60 chr10:3420689-3421189 1.6e-07 8_[+1]_70 chr19:45265298-45265798 1.6e-07 74_[+1]_4 chr17:45449586-45450086 1.8e-07 74_[-1]_4 chr10:1571658-1572158 2.1e-07 [+1]_78 chr8:350416-350916 2.1e-07 34_[+1]_44 chr7:98548102-98548602 2.3e-07 56_[-1]_22 chr8:144222665-144223165 2.3e-07 43_[+1]_35 chr1:16132442-16132942 2.8e-07 47_[+1]_31 chr1:27668893-27669393 3e-07 2_[-1]_76 chr19:39409313-39409813 3e-07 43_[+1]_35 chr19:11210445-11210945 3.3e-07 27_[-1]_51 chr17:83050631-83051131 3.3e-07 21_[+1]_57 chr5:116574671-116575171 3.3e-07 76_[+1]_2 chr7:98548317-98548817 3.6e-07 65_[-1]_13 chr20:63815398-63815898 4.9e-07 39_[+1]_39 chr19:11210110-11210610 5.8e-07 6_[-1]_72 chr8:350619-351119 7.3e-07 17_[+1]_61 chr8:1378144-1378644 9.1e-07 22_[-1]_56 chr3:194134780-194135280 9.1e-07 65_[-1]_13 chr21:45433808-45434308 9.1e-07 47_[+1]_31 chr13:113617269-11361776 9.1e-07 45_[-1]_33 chr20:41339855-41340355 9.1e-07 30_[-1]_48 chr1:30270390-30270890 1e-06 41_[-1]_37 chr21:36257658-36258158 1.3e-06 41_[+1]_37 chr1:233624200-233624700 2.3e-06 34_[-1]_44 chr8:10959981-10960481 2.8e-06 75_[+1]_3 chr11:47578692-47579192 4.3e-06 35_[-1]_43 chr1:40691599-40692099 4.8e-06 59_[+1]_19 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGTRGRKGTGTGTGCAGGTGWG MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF KGTRGRKGTGTGTGCAGGTGWG width=22 seqs=75 chr5:1545403-1545903 ( 39) TGTAGGTATGTGTGCAGGTGTG 1 chr14:99551250-99551750 ( 50) TGCAGGTGGGTGTGCAGGTGAG 1 chr1:1340850-1341350 ( 42) TGTGCAGGTGTGTGCAGGTGTG 1 chr1:53555724-53556224 ( 31) GGTATGTGTGTGTGCAGGTATA 1 chr1:17675618-17676118 ( 31) TGCAGGTGTGGGTACAGGTGTG 1 chr1:53555949-53556449 ( 8) TGTGTGTGTGTATGCAGGTGTA 1 chr20:61218123-61218623 ( 8) TGCAGGTGTAGGTGCAGGTGTA 1 chr10:133057792-13305829 ( 27) GGTGAGGGTATGTGCAGGTGAG 1 chr10:133057992-13305849 ( 35) GGTGAGGGTATGTGCAGGTGAG 1 chr19:2636761-2637261 ( 66) TGTGCAGGTGGGTGCAGGTGAG 1 chr13:113556852-11355735 ( 4) TACAGGTGTGTGTACAGGTGTG 1 chr13:113557054-11355755 ( 27) GGTATGTGTGTGTGCAAGTGTA 1 chr16:90032082-90032582 ( 50) TGTACAGGTATGTACAGGTGAG 1 chr8:144222437-144222937 ( 46) TGTGGATGTGGGTGCAGGTAGG 1 chr1:17675868-17676368 ( 19) TGCGGGTGTAGGTGCAGGTGTA 1 chr10:1571857-1572357 ( 65) GGCAGGTGAGTGTGCAGGTGAG 1 chr13:35762896-35763396 ( 29) TGCGTAGGTGTGTGTAGGTGTG 1 chr1:230588390-230588890 ( 52) AGTAGGTGGGTGTGTAGGTAAG 1 chr1:22260763-22261263 ( 3) TGTACGTGTACGTGCAGGTGTG 1 chr10:86283858-86284358 ( 5) GGTATGTGTGAGGGCAGGTATG 1 chr12:132429745-13243024 ( 23) TGTGCAGGTGTGCCCAGGTGTG 1 chr10:131850812-13185131 ( 10) TGGAAAGGTGTGTGCAGGTGGA 1 chr1:1123592-1124092 ( 65) TGCAGGTGTGTGCTCAGGTGTG 1 chr12:132237196-13223769 ( 2) GGCAGGTGTTTGGGCAGGTGTG 1 chr5:1844655-1845155 ( 75) TGTAGGTGCAGGTGTAGGTGAG 1 chr11:69498446-69498946 ( 56) GGTGAAGGTATGTGCAAGTGTG 1 chr1:839323-839823 ( 1) TACGTGTGTGTGTCCAGGTGTG 1 chr16:89142413-89142913 ( 1) GGTGTAGGTGTCTGCAGGTGTG 1 chr20:52424130-52424630 ( 48) GGTGCAGGTAGGTACAGGTGAG 1 chr13:27990684-27991184 ( 44) TGTAGGTATATGTATAGGTATA 1 chr18:79832124-79832624 ( 42) TGGGCAGGTGAGTGCAGGTGAG 1 chr8:320015-320515 ( 58) TAGGTGTGTGTGTCCAGGTGTG 1 chr9:93672479-93672979 ( 6) TACAGGTGTAGATGCAGGTATG 1 chr1:16132643-16133143 ( 62) GGGAGAGGTGGGCACAGGTGTA 1 chr1:209770546-209771046 ( 54) GAGGTGTGTGTGTGCAGGTGGA 1 chr9:135563163-135563663 ( 10) GGTGGGTAGGTGGGTAGGTATA 1 chr1:1123802-1124302 ( 46) CGCAGGTGTGTGCACAGGTGTG 1 chr11:71448046-71448546 ( 62) GGGGAAGGTGGGCGCAGGTGAG 1 chr5:1157496-1157996 ( 37) AGAACAGGTGTGAGCAGGTGTG 1 chr9:93671043-93671543 ( 4) TGTAGATGCAGGTGCGGGTGTG 1 chr19:11209870-11210370 ( 40) GGTAAGGGGATAGACAGGTGAG 1 chr17:64796454-64796954 ( 25) GGTGGATGGGTAGGTAGGTAGG 1 chr1:236168919-236169419 ( 60) TGCAGGTGCAGGTGCAGGTGCA 1 chr19:38224230-38224730 ( 12) GGCGTGTGCGAGTCCAGGTGTG 1 chr20:63815608-63816108 ( 37) AGTGAGTGCAGGTGCAGGTGGG 1 chr1:15675655-15676155 ( 19) GGTAGGTAGGTAGGTAGGTAGG 1 chr14:30625483-30625983 ( 19) GGTATATAGGTATATAGGTATA 1 chr10:3420689-3421189 ( 9) TGCAGGTAGGGACGCAGGTGGG 1 chr19:45265298-45265798 ( 75) GGTATAAGGGTGCCCAGGTGTG 1 chr17:45449586-45450086 ( 75) GGTGGATGGATAGGTAGGTAGG 1 chr10:1571658-1572158 ( 1) TGCAGGTGAGTGTGCAGGCGAG 1 chr8:350416-350916 ( 35) GGTAGGTAGATAGGCAGGTAGA 1 chr7:98548102-98548602 ( 57) GATAGGTAGGTAGGCAGGTAAA 1 chr8:144222665-144223165 ( 44) TGTGGAGGTAGGTCCAGGTACA 1 chr1:16132442-16132942 ( 48) AGGACAGGTGGGCACAGGTGTA 1 chr1:27668893-27669393 ( 3) TGCGGGTAAGGATGCAGGTAAG 1 chr19:39409313-39409813 ( 44) TGAAAGGGTGGGACCAGGTGAG 1 chr19:11210445-11210945 ( 28) GGTAAAGGGGTGGACAGATGAG 1 chr17:83050631-83051131 ( 22) GGCAGGTGCACGGGCAGGTATG 1 chr5:116574671-116575171 ( 77) GGTGTATGTGAGTGCGAGTGAG 1 chr7:98548317-98548817 ( 66) GGTAGATAGGTAAGTAGGTAGG 1 chr20:63815398-63815898 ( 40) GGTACAGGTGGGCATAGGTGCA 1 chr19:11210110-11210610 ( 7) GGTGAAGGGATGGCCAAGTGAG 1 chr8:350619-351119 ( 18) AGTAGGTAGGTAAGTAGGTAGG 1 chr8:1378144-1378644 ( 23) AGGACAGGTGAGGTCAGGTGTG 1 chr3:194134780-194135280 ( 66) TGTGCGTGCGTGTGTGAGTGAG 1 chr21:45433808-45434308 ( 48) GCCAGGTGTGTGAGCAGGTGCA 1 chr13:113617269-11361776 ( 46) GGTGAATGGTTCTGCAGGTGAA 1 chr20:41339855-41340355 ( 31) GGGACAGGTGAGCCCAGGTGCG 1 chr1:30270390-30270890 ( 42) AGTAGGTGGGCAGACAGGTAGG 1 chr21:36257658-36258158 ( 42) TGTAGGTAGGTAGATAGATGTA 1 chr1:233624200-233624700 ( 35) AAGATAGGTGAGGCCAGGTGAA 1 chr8:10959981-10960481 ( 76) ATAGCAGGTGGGTGCAGGTATA 1 chr11:47578692-47579192 ( 36) GAAAGGAGGGAACGCAGGTGAG 1 chr1:40691599-40692099 ( 60) TGAGCAGAGGTGTGTGAGTGTG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGTRGRKGTGTGTGCAGGTGWG MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 11.479 E= 1.7e-159 -89 -438 67 94 -106 -438 164 -406 -174 -13 -106 130 143 -1287 53 -1287 -60 -47 75 -25 94 -1287 105 -1287 -306 -1287 38 146 -36 -1287 158 -1287 -248 -157 1 140 26 -1287 135 -306 -106 -279 -6 140 -6 -338 145 -1287 -174 -92 -38 136 -25 -106 124 -306 -1287 153 -1287 -15 209 -1287 -238 -1287 -148 -1287 173 -1287 -306 -1287 181 -1287 -1287 -438 -1287 215 26 -1287 140 -1287 46 -206 -79 107 40 -1287 135 -1287 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGTRGRKGTGTGTGCAGGTGWG MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 75 E= 1.7e-159 0.120000 0.013333 0.440000 0.426667 0.106667 0.013333 0.866667 0.013333 0.066667 0.253333 0.133333 0.546667 0.600000 0.000000 0.400000 0.000000 0.146667 0.200000 0.466667 0.186667 0.426667 0.000000 0.573333 0.000000 0.026667 0.000000 0.360000 0.613333 0.173333 0.000000 0.826667 0.000000 0.040000 0.093333 0.280000 0.586667 0.266667 0.000000 0.706667 0.026667 0.106667 0.040000 0.266667 0.586667 0.213333 0.026667 0.760000 0.000000 0.066667 0.146667 0.213333 0.573333 0.186667 0.133333 0.653333 0.026667 0.000000 0.800000 0.000000 0.200000 0.946667 0.000000 0.053333 0.000000 0.080000 0.000000 0.920000 0.000000 0.026667 0.000000 0.973333 0.000000 0.000000 0.013333 0.000000 0.986667 0.266667 0.000000 0.733333 0.000000 0.306667 0.066667 0.160000 0.466667 0.293333 0.000000 0.706667 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif KGTRGRKGTGTGTGCAGGTGWG MEME-1 regular expression -------------------------------------------------------------------------------- [GT]G[TC][AG][GC][GA][TG]G[TG][GA][TG][GA][TG]G[CT]AGGT[GA][TA][GA] -------------------------------------------------------------------------------- Time 649.40 secs. ******************************************************************************** ******************************************************************************** MOTIF GTGTGKGCAGGTGT MEME-2 width = 14 sites = 81 llr = 889 E-value = 9.0e-064 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTGTGKGCAGGTGT MEME-2 Description -------------------------------------------------------------------------------- Simplified A 2131212:a:::32 pos.-specific C :::111:9:::::1 probability G 8373737::aa:72 matrix T :6:6:511:::a:6 bits 2.2 * * 2.0 **** 1.7 **** 1.5 **** Relative 1.3 ***** Entropy 1.1 * ****** (15.8 bits) 0.9 * * * ****** 0.7 *** * ******* 0.4 ************** 0.2 ************** 0.0 -------------- Multilevel GTGTGTGCAGGTGT consensus AGAGAG A sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGKGCAGGTGT MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- -------------- chr1:1123802-1124302 - 28 4.26e-09 GGTGTGTGGC GTGTGTGCAGGTGT GTGCGCGCAG chr1:53555724-53556224 + 11 4.26e-09 TATTGCAGGT GTGTGTGCAGGTGT ACTGCAGGTA chr1:53555949-53556449 + 44 4.26e-09 AGGTTTGTGT GTGTGTGCAGGTGT ATTGCAGGTG chr12:132429745-13243024 - 74 4.26e-09 GTGTGCTCCA GTGTGTGCAGGTGT GCTCAGGTGT chr1:1340850-1341350 - 11 4.26e-09 GCAGGGGTGC GTGTGTGCAGGTGT GCATGTGTGT chr5:1157496-1157996 - 68 1.64e-08 GTGTGAGCCA GTGTGGGCAGGTGT GAGCAGATGA chr10:86283858-86284358 - 82 1.99e-08 GATGT GTGTATGCAGGTGT GTGCATGAGG chr12:132237196-13223769 - 65 5.29e-08 GTGTAAACAG GTATGGGCAGGTGT GAGCAGCAGT chr10:131850812-13185131 - 65 6.37e-08 AGGTGGAAAG GTGTGTGCAGGTGG AAAGGTGTGT chr1:17675618-17676118 + 14 9.74e-08 gggtacaggt gtgtgttcaggtgt gggtgcaggt chr1:17675868-17676368 + 74 9.74e-08 gggtgcaggt gtaggtgcaggtgt aggtgcaggc chr1:16132643-16133143 + 3 9.74e-08 AG GTGGGTGCAGGTAT GGGGGGAAGG chr8:10959981-10960481 + 26 9.74e-08 GGTACAGCAG GTGGGTgcaggtat agcaggtggg chr10:133057792-13305829 + 66 1.38e-07 GCAGGTGAGG GTATGTGCAGGTGA GGGACCGGGC chr14:105567243-10556774 + 76 1.61e-07 CAGGTGTGCG GTGTGGACAGGTGT GTATTGTGGG chr14:105567443-10556794 + 77 1.61e-07 CAGGTGTGTG GTGTGGACAGGTGT GTGGGGTGGA chr1:1123592-1124092 - 20 2.01e-07 GTGCTGAGGT GTGTGCGCAGGTGT GTGCTCAGGT chr13:35762896-35763396 - 6 2.01e-07 GTATAGGTGT GTATGTGTAGGTGT GTGTA chr1:22260763-22261263 + 79 2.47e-07 TGCGGCGGGT GTGCGTGCAGGTGT GCGGCGGG chr13:113556852-11355735 + 77 3.85e-07 gtatgtgcag atgtgtgtaggtgt gcgtgtacag chr21:45433808-45434308 + 5 4.62e-07 AGAT GTGTGTGCAGGTGC ATGAGCCAGG chr1:839323-839823 - 44 5.39e-07 GTCTAGGTGT GTGTGTCCAGGTGT GTGTCTCTAG chr20:52424130-52424630 - 29 8.29e-07 GTGAGTGAAG GTGGGTGCAGGTAG GTTCAGGTGA chr9:93672479-93672979 + 49 8.29e-07 AGGTACAGGT GTAGATGCAGGTAT GGGTATAGGA chr8:144222665-144223165 + 17 8.29e-07 aggcccagat gtgggtgcaggtag atccaggtac chr1:16132442-16132942 + 11 1.10e-06 ATGGGGAGAG GTGGGTTCAGGTAT TGGGGAGGAG chr13:113557054-11355755 + 8 1.10e-06 caggtgt gtgtgcacaggtgt gtccaggtat chr11:71448046-71448546 - 17 1.24e-06 AGTGGCCAAG GTGTGCGCAGGTGA GGCCAGGGGA chr5:1545403-1545903 - 64 1.43e-06 GGGAAAGTGT ATAGATGCAGGTGT GTGTGTAGGT chr20:63815608-63816108 + 13 1.43e-06 CATAGGTGCA GTGAGTGCAGGTGA GCACAGGTGC chr10:1571857-1572357 + 36 1.43e-06 gtgtgctggt gagtgtgcaggtga gtggacaggt chr14:99551250-99551750 + 77 1.65e-06 gtgagtacgt gagtgtgcaggtgg gtgggcaggt chr18:79832124-79832624 - 1 1.65e-06 GGGCAGGTAA GGATGGGCAGGTGA chr19:29696185-29696685 - 33 1.87e-06 CTGGGTATCT GGGTGTCCAGGTGT CTGGATGTCA chr19:45265298-45265798 + 25 1.87e-06 TGGAGTAAGA GGACGTGCAGGTGT GAGGGTGCCC chrX:153319921-153320421 - 12 2.34e-06 AGGTGAGGCA GGAGGTGCAGGTGA GGCAGGAGGT chr9:93671043-93671543 + 65 2.63e-06 GGGTGTGGGA GTAGGGTCAGGTGT AGATGCAGAT chr5:180861295-180861795 - 33 2.97e-06 TTCAGGAACC AGGTAGGCAGGTAT TTACTTTATT chr19:11209870-11210370 - 73 3.33e-06 GGCAGGTGAG GGGTGGACAGGTGA GAGAGTGGAC chr2:241572635-241573135 - 34 3.33e-06 TGGGGCTCAG GTGAGAGCAGGTGT TCCGGGCCCC chr17:45449586-45450086 - 40 3.33e-06 GTGGCTAGGT GGATGGGCAGGTAG GTAGGTGGCT chr2:241572836-241573336 - 35 3.33e-06 TGGGGCTCAG GTGAGAGCAGGTGT TCCGGGCCCC chr19:41926073-41926573 + 78 3.71e-06 CAGGTGTTGC GTGCAGGCAGGTAT GAGGAGATA chrX:724739-725239 - 25 3.71e-06 GGGTCACTGC AGGTGGTCAGGTGT TCAGATCTCA chr8:1378144-1378644 - 82 4.62e-06 GACAG GTGAGGTCAGGTGT GTGCAGGACG chr5:1844655-1845155 - 8 5.11e-06 AGGTGTCTGT ATAGGTGTAGGTAT AGATATA chr17:68511915-68512415 + 32 5.11e-06 GGACAGGTAA GGAGGGGCAGGTGA GCAGGAAGGA chr1:230588390-230588890 + 11 5.67e-06 GTGTGTGGAT AAGTAGGCAGGTGT GTAGGTAAGT chr19:11210445-11210945 - 60 5.67e-06 GACAGTGAAA GGATGGACAGGTGA GGGGTAGATA chr13:27990684-27991184 + 9 5.67e-06 gtataggt atatgtataggtat atgtataggt chr10:1571658-1572158 + 56 7.59e-06 gtggaaaggt gagtaggcaggtga tatgctggtg chr19:2636761-2637261 - 3 7.59e-06 AGGTGGGGAC GGAAGTGCAGGTGG GC chr19:41925133-41925633 + 43 9.15e-06 GTGGGAAAAC AGGTATACAGGTGA CGCAGATACC chr9:135563163-135563663 + 49 9.15e-06 acaggtgggt aggtggacaggtgg gcaggtgagt chr20:61218123-61218623 + 63 9.97e-06 agaggcaagt gcatgtgtaggtat aagtgtagct chr22:19168243-19168743 - 57 1.19e-05 GCATCTACCT GGACGGACAGGTGT GTGTTTACCA chr8:320015-320515 + 37 1.30e-05 GTCCAGGTGT GTGCATCCAGGTGT GTACGTCTAG chr5:180293516-180294016 - 55 1.41e-05 TGAGTCTGAG GTAGCGACAGGTGT GGGCCCTCCT chr10:3420689-3421189 + 82 1.41e-05 agaactcagg agggatgcaggtag gatgc chr13:113624643-11362514 + 16 1.52e-05 TGTCTCTCAC GTGTCCTCAGGTGT TTCTCAGGTG chr13:113624851-11362535 + 21 1.52e-05 TGTCTCTCAC GTGTCCTCAGGTGT CTCTCACGTG chr13:113625814-11362631 + 3 1.52e-05 AC GTGTCCTCAGGTGT CTCTCACGCG chr1:27668893-27669393 - 76 1.65e-05 GGATGCAAGT AAGGGTGCAGGTAA GGATGCGGGT chr17:64796454-64796954 - 82 1.78e-05 TAGGT GAATGAGCAGGTGG CTAGGTGGAT chr1:233624200-233624700 - 66 1.93e-05 GTGAGGCCAG GTGAAGACAGGTGA GGCCAGGTGA chr8:144222437-144222937 + 11 2.08e-05 gtggaggaag gtaggttcaggtac aggtgtggga chr16:89142413-89142913 - 54 2.08e-05 AGGTGAGGGT GTCTCTGCAGGTGT GGCTCTGTCT chr17:83050631-83051131 + 4 2.39e-05 GAT GCGCAGGCAGGTGT gcacggcagg chr16:90032082-90032582 + 84 2.57e-05 GGTGTGGTAC AGGTGACCAGGTGT GTA chr7:98548102-98548602 - 14 2.57e-05 GTAGATAGGT AGGTAGGCAGGTAC ATAGGTAGTT chr1:30270390-30270890 - 24 2.57e-05 GGTAGGAGGT GGGCAGGCAGGTAG AAGGTGAGCA chr11:69498446-69498946 + 33 2.75e-05 GTGGAGGGGT GCGGGTGTAGGTGG AGGGGTGCAG chr20:63815398-63815898 + 7 2.93e-05 gtgcag gtgggcacaggtgc agaaggtgca chr21:36257658-36258158 + 5 2.93e-05 agag atagatgtaggtag atgtagttag chr8:350416-350916 + 6 3.14e-05 tacac aggtaggtaggtag ataggaaagc chr1:15675655-15676155 - 52 3.14e-05 GCAGGCAGAT AGGTAGGTAGGTAG GCAGGCAGAT chr8:350619-351119 + 61 3.14e-05 ataggcaagt aggtaggtaggtag cttggcaggt chr7:98548317-98548817 - 15 4.25e-05 ATAGGTAGAC AGATAGGTAGGTAG GCAAGTAGGT chr1:236168919-236169419 + 85 4.25e-05 aggtgcaggt gcaggtgcaggtac ag chr17:8173279-8173779 + 76 4.51e-05 gccctccgga ggaggaacaggtaa ggattatccc chr14:30625483-30625983 + 46 8.44e-05 gtatataggt atatCAATAGGTAT ATTGATATAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGKGCAGGTGT MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:1123802-1124302 4.3e-09 27_[-2]_59 chr1:53555724-53556224 4.3e-09 10_[+2]_76 chr1:53555949-53556449 4.3e-09 43_[+2]_43 chr12:132429745-13243024 4.3e-09 73_[-2]_13 chr1:1340850-1341350 4.3e-09 10_[-2]_76 chr5:1157496-1157996 1.6e-08 67_[-2]_19 chr10:86283858-86284358 2e-08 81_[-2]_5 chr12:132237196-13223769 5.3e-08 64_[-2]_22 chr10:131850812-13185131 6.4e-08 64_[-2]_22 chr1:17675618-17676118 9.7e-08 13_[+2]_73 chr1:17675868-17676368 9.7e-08 73_[+2]_13 chr1:16132643-16133143 9.7e-08 2_[+2]_84 chr8:10959981-10960481 9.7e-08 25_[+2]_61 chr10:133057792-13305829 1.4e-07 65_[+2]_21 chr14:105567243-10556774 1.6e-07 75_[+2]_11 chr14:105567443-10556794 1.6e-07 76_[+2]_10 chr1:1123592-1124092 2e-07 19_[-2]_67 chr13:35762896-35763396 2e-07 5_[-2]_81 chr1:22260763-22261263 2.5e-07 78_[+2]_8 chr13:113556852-11355735 3.8e-07 76_[+2]_10 chr21:45433808-45434308 4.6e-07 4_[+2]_82 chr1:839323-839823 5.4e-07 43_[-2]_43 chr20:52424130-52424630 8.3e-07 28_[-2]_58 chr9:93672479-93672979 8.3e-07 48_[+2]_38 chr8:144222665-144223165 8.3e-07 16_[+2]_70 chr1:16132442-16132942 1.1e-06 10_[+2]_76 chr13:113557054-11355755 1.1e-06 7_[+2]_79 chr11:71448046-71448546 1.2e-06 16_[-2]_70 chr5:1545403-1545903 1.4e-06 63_[-2]_23 chr20:63815608-63816108 1.4e-06 12_[+2]_74 chr10:1571857-1572357 1.4e-06 35_[+2]_51 chr14:99551250-99551750 1.6e-06 76_[+2]_10 chr18:79832124-79832624 1.6e-06 [-2]_86 chr19:29696185-29696685 1.9e-06 32_[-2]_54 chr19:45265298-45265798 1.9e-06 24_[+2]_62 chrX:153319921-153320421 2.3e-06 11_[-2]_75 chr9:93671043-93671543 2.6e-06 64_[+2]_22 chr5:180861295-180861795 3e-06 32_[-2]_54 chr19:11209870-11210370 3.3e-06 72_[-2]_14 chr2:241572635-241573135 3.3e-06 33_[-2]_53 chr17:45449586-45450086 3.3e-06 39_[-2]_47 chr2:241572836-241573336 3.3e-06 34_[-2]_52 chr19:41926073-41926573 3.7e-06 77_[+2]_9 chrX:724739-725239 3.7e-06 24_[-2]_62 chr8:1378144-1378644 4.6e-06 81_[-2]_5 chr5:1844655-1845155 5.1e-06 7_[-2]_79 chr17:68511915-68512415 5.1e-06 31_[+2]_55 chr1:230588390-230588890 5.7e-06 10_[+2]_76 chr19:11210445-11210945 5.7e-06 59_[-2]_27 chr13:27990684-27991184 5.7e-06 8_[+2]_78 chr10:1571658-1572158 7.6e-06 55_[+2]_31 chr19:2636761-2637261 7.6e-06 2_[-2]_84 chr19:41925133-41925633 9.1e-06 42_[+2]_44 chr9:135563163-135563663 9.1e-06 48_[+2]_38 chr20:61218123-61218623 1e-05 62_[+2]_24 chr22:19168243-19168743 1.2e-05 56_[-2]_30 chr8:320015-320515 1.3e-05 36_[+2]_50 chr5:180293516-180294016 1.4e-05 54_[-2]_32 chr10:3420689-3421189 1.4e-05 81_[+2]_5 chr13:113624643-11362514 1.5e-05 15_[+2]_71 chr13:113624851-11362535 1.5e-05 20_[+2]_66 chr13:113625814-11362631 1.5e-05 2_[+2]_84 chr1:27668893-27669393 1.6e-05 75_[-2]_11 chr17:64796454-64796954 1.8e-05 81_[-2]_5 chr1:233624200-233624700 1.9e-05 65_[-2]_21 chr8:144222437-144222937 2.1e-05 10_[+2]_76 chr16:89142413-89142913 2.1e-05 53_[-2]_33 chr17:83050631-83051131 2.4e-05 3_[+2]_83 chr16:90032082-90032582 2.6e-05 83_[+2]_3 chr7:98548102-98548602 2.6e-05 13_[-2]_73 chr1:30270390-30270890 2.6e-05 23_[-2]_63 chr11:69498446-69498946 2.7e-05 32_[+2]_54 chr20:63815398-63815898 2.9e-05 6_[+2]_80 chr21:36257658-36258158 2.9e-05 4_[+2]_82 chr8:350416-350916 3.1e-05 5_[+2]_81 chr1:15675655-15676155 3.1e-05 51_[-2]_35 chr8:350619-351119 3.1e-05 60_[+2]_26 chr7:98548317-98548817 4.3e-05 14_[-2]_72 chr1:236168919-236169419 4.3e-05 84_[+2]_2 chr17:8173279-8173779 4.5e-05 75_[+2]_11 chr14:30625483-30625983 8.4e-05 45_[+2]_41 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGKGCAGGTGT MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTGTGKGCAGGTGT width=14 seqs=81 chr1:1123802-1124302 ( 28) GTGTGTGCAGGTGT 1 chr1:53555724-53556224 ( 11) GTGTGTGCAGGTGT 1 chr1:53555949-53556449 ( 44) GTGTGTGCAGGTGT 1 chr12:132429745-13243024 ( 74) GTGTGTGCAGGTGT 1 chr1:1340850-1341350 ( 11) GTGTGTGCAGGTGT 1 chr5:1157496-1157996 ( 68) GTGTGGGCAGGTGT 1 chr10:86283858-86284358 ( 82) GTGTATGCAGGTGT 1 chr12:132237196-13223769 ( 65) GTATGGGCAGGTGT 1 chr10:131850812-13185131 ( 65) GTGTGTGCAGGTGG 1 chr1:17675618-17676118 ( 14) GTGTGTTCAGGTGT 1 chr1:17675868-17676368 ( 74) GTAGGTGCAGGTGT 1 chr1:16132643-16133143 ( 3) GTGGGTGCAGGTAT 1 chr8:10959981-10960481 ( 26) GTGGGTGCAGGTAT 1 chr10:133057792-13305829 ( 66) GTATGTGCAGGTGA 1 chr14:105567243-10556774 ( 76) GTGTGGACAGGTGT 1 chr14:105567443-10556794 ( 77) GTGTGGACAGGTGT 1 chr1:1123592-1124092 ( 20) GTGTGCGCAGGTGT 1 chr13:35762896-35763396 ( 6) GTATGTGTAGGTGT 1 chr1:22260763-22261263 ( 79) GTGCGTGCAGGTGT 1 chr13:113556852-11355735 ( 77) ATGTGTGTAGGTGT 1 chr21:45433808-45434308 ( 5) GTGTGTGCAGGTGC 1 chr1:839323-839823 ( 44) GTGTGTCCAGGTGT 1 chr20:52424130-52424630 ( 29) GTGGGTGCAGGTAG 1 chr9:93672479-93672979 ( 49) GTAGATGCAGGTAT 1 chr8:144222665-144223165 ( 17) GTGGGTGCAGGTAG 1 chr1:16132442-16132942 ( 11) GTGGGTTCAGGTAT 1 chr13:113557054-11355755 ( 8) GTGTGCACAGGTGT 1 chr11:71448046-71448546 ( 17) GTGTGCGCAGGTGA 1 chr5:1545403-1545903 ( 64) ATAGATGCAGGTGT 1 chr20:63815608-63816108 ( 13) GTGAGTGCAGGTGA 1 chr10:1571857-1572357 ( 36) GAGTGTGCAGGTGA 1 chr14:99551250-99551750 ( 77) GAGTGTGCAGGTGG 1 chr18:79832124-79832624 ( 1) GGATGGGCAGGTGA 1 chr19:29696185-29696685 ( 33) GGGTGTCCAGGTGT 1 chr19:45265298-45265798 ( 25) GGACGTGCAGGTGT 1 chrX:153319921-153320421 ( 12) GGAGGTGCAGGTGA 1 chr9:93671043-93671543 ( 65) GTAGGGTCAGGTGT 1 chr5:180861295-180861795 ( 33) AGGTAGGCAGGTAT 1 chr19:11209870-11210370 ( 73) GGGTGGACAGGTGA 1 chr2:241572635-241573135 ( 34) GTGAGAGCAGGTGT 1 chr17:45449586-45450086 ( 40) GGATGGGCAGGTAG 1 chr2:241572836-241573336 ( 35) GTGAGAGCAGGTGT 1 chr19:41926073-41926573 ( 78) GTGCAGGCAGGTAT 1 chrX:724739-725239 ( 25) AGGTGGTCAGGTGT 1 chr8:1378144-1378644 ( 82) GTGAGGTCAGGTGT 1 chr5:1844655-1845155 ( 8) ATAGGTGTAGGTAT 1 chr17:68511915-68512415 ( 32) GGAGGGGCAGGTGA 1 chr1:230588390-230588890 ( 11) AAGTAGGCAGGTGT 1 chr19:11210445-11210945 ( 60) GGATGGACAGGTGA 1 chr13:27990684-27991184 ( 9) ATATGTATAGGTAT 1 chr10:1571658-1572158 ( 56) GAGTAGGCAGGTGA 1 chr19:2636761-2637261 ( 3) GGAAGTGCAGGTGG 1 chr19:41925133-41925633 ( 43) AGGTATACAGGTGA 1 chr9:135563163-135563663 ( 49) AGGTGGACAGGTGG 1 chr20:61218123-61218623 ( 63) GCATGTGTAGGTAT 1 chr22:19168243-19168743 ( 57) GGACGGACAGGTGT 1 chr8:320015-320515 ( 37) GTGCATCCAGGTGT 1 chr5:180293516-180294016 ( 55) GTAGCGACAGGTGT 1 chr10:3420689-3421189 ( 82) AGGGATGCAGGTAG 1 chr13:113624643-11362514 ( 16) GTGTCCTCAGGTGT 1 chr13:113624851-11362535 ( 21) GTGTCCTCAGGTGT 1 chr13:113625814-11362631 ( 3) GTGTCCTCAGGTGT 1 chr1:27668893-27669393 ( 76) AAGGGTGCAGGTAA 1 chr17:64796454-64796954 ( 82) GAATGAGCAGGTGG 1 chr1:233624200-233624700 ( 66) GTGAAGACAGGTGA 1 chr8:144222437-144222937 ( 11) GTAGGTTCAGGTAC 1 chr16:89142413-89142913 ( 54) GTCTCTGCAGGTGT 1 chr17:83050631-83051131 ( 4) GCGCAGGCAGGTGT 1 chr16:90032082-90032582 ( 84) AGGTGACCAGGTGT 1 chr7:98548102-98548602 ( 14) AGGTAGGCAGGTAC 1 chr1:30270390-30270890 ( 24) GGGCAGGCAGGTAG 1 chr11:69498446-69498946 ( 33) GCGGGTGTAGGTGG 1 chr20:63815398-63815898 ( 7) GTGGGCACAGGTGC 1 chr21:36257658-36258158 ( 5) ATAGATGTAGGTAG 1 chr8:350416-350916 ( 6) AGGTAGGTAGGTAG 1 chr1:15675655-15676155 ( 52) AGGTAGGTAGGTAG 1 chr8:350619-351119 ( 61) AGGTAGGTAGGTAG 1 chr7:98548317-98548817 ( 15) AGATAGGTAGGTAG 1 chr1:236168919-236169419 ( 85) GCAGGTGCAGGTAC 1 chr17:8173279-8173779 ( 76) GGAGGAACAGGTAA 1 chr14:30625483-30625983 ( 46) ATATCAATAGGTAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGKGCAGGTGT MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 14 n= 52200 bayes= 11.1729 E= 9.0e-064 8 -1298 146 -1298 -159 -249 3 141 53 -449 126 -1298 -159 -168 -10 138 8 -190 132 -1298 -159 -168 26 119 -36 -249 126 -100 -1298 162 -1298 -59 217 -1298 -1298 -1298 -1298 -1298 185 -1298 -1298 -1298 185 -1298 -1298 -1298 -1298 217 47 -1298 132 -1298 -36 -217 -49 135 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGKGCAGGTGT MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 14 nsites= 81 E= 9.0e-064 0.234568 0.000000 0.765432 0.000000 0.074074 0.049383 0.283951 0.592593 0.320988 0.012346 0.666667 0.000000 0.074074 0.086420 0.259259 0.580247 0.234568 0.074074 0.691358 0.000000 0.074074 0.086420 0.333333 0.506173 0.172840 0.049383 0.666667 0.111111 0.000000 0.851852 0.000000 0.148148 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.308642 0.000000 0.691358 0.000000 0.172840 0.061728 0.197531 0.567901 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTGTGKGCAGGTGT MEME-2 regular expression -------------------------------------------------------------------------------- [GA][TG][GA][TG][GA][TG]GCAGGT[GA]T -------------------------------------------------------------------------------- Time 1232.01 secs. ******************************************************************************** ******************************************************************************** MOTIF RKGYAGGTRDRBAKGYRGGTRK MEME-3 width = 22 sites = 44 llr = 600 E-value = 7.4e-043 ******************************************************************************** -------------------------------------------------------------------------------- Motif RKGYAGGTRDRBAKGYRGGTRK MEME-3 Description -------------------------------------------------------------------------------- Simplified A 411:821:3241711:5:3:51 pos.-specific C :::5:::::::3:::3:1:2:: probability G 549:378:7453249:578:54 matrix T :5:5:219:3:315:612:8:5 bits 2.2 2.0 1.7 1.5 * * * Relative 1.3 * * * * * Entropy 1.1 * * ** * * *** (19.7 bits) 0.9 *** *** * ** **** 0.7 ********* * ********* 0.4 *********** ********** 0.2 ********************** 0.0 ---------------------- Multilevel GTGTAGGTGGGTATGTAGGTAT consensus AG CG ATAGGG CGTA GG sequence A C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKGYAGGTRDRBAKGYRGGTRK MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------------- chr5:1844655-1845155 - 32 1.05e-10 GGTGACATAG GTGTAGGTGTAGATGTAGATGT AGGTGTCTGT chr20:61218123-61218623 + 31 2.13e-10 gcaggtgtag gtgcaggtgtagatgtagatgt agaggcaagt chr1:15675655-15676155 - 76 2.66e-10 GAT AGGTAGGTAGGTAGGTAGGTAG GCAGGCAGAT chr21:36257658-36258158 + 19 2.97e-09 atgtaggtag atgtagttaggtaggtaggtag atgtaggtag chr9:93672479-93672979 + 77 4.74e-09 ATAGGAGTAG GTACAGGTGTAGATGCAGGTAT GG chr13:35762896-35763396 - 60 4.74e-09 GTGTAGGTGT GTGTAGGTGTTTATGTGTGTAT AGGTGTGTAT chr9:135563163-135563663 + 69 5.51e-09 gtgggcaggt gagtaggtgaacaggtgggtgg gtgaacaggt chr1:27668893-27669393 - 40 9.83e-09 GCGGGTAAGG ATGCAGGTAAAGATGCGGGTAA GGATGCAGGT chr1:53555949-53556449 + 63 1.29e-08 GGTGTATTGC AGGTGTGTGTGTATGCAGGTGT ACTGTAGGTG chr1:230588390-230588890 + 27 1.48e-08 GCAGGTGTGT AGGTAAGTAGGTAGGTGTGTGG ATAAGTAGGT chr10:131850812-13185131 - 35 2.19e-08 GGAAAGGTGT GTGTGGGTGGAAAGGTATGTGT AGGTGGAAAG chr1:17675618-17676118 + 54 2.49e-08 acaggtgtgg gtgcaggtgtaggtgcaggcat gggtaaaggt chr1:209770546-209771046 + 3 2.82e-08 GT GTGCAGGTGGAGGTGTGCGTGT GCCTATGGAG chr14:99551250-99551750 + 17 3.19e-08 atgagtgagc aggtaagtgagcaagtgggtgt agaaggcagt chr7:98548317-98548817 - 35 3.19e-08 GCAGCCAGGT AGGTAGGTAGGCAAGTAGATAG GTAGACAGAT chr8:350619-351119 + 77 4.06e-08 gtaggtagct tggcaggtagacaggtaggtag gt chr1:53555724-53556224 + 57 5.13e-08 GGTATACTGC AGGTGTGTGTGTGTGCAGGTAT ACTGCAGGTG chr8:350416-350916 + 78 5.76e-08 gtagatagga aagcaggtaggaaggtagatag g chr7:98548102-98548602 - 34 9.00e-08 GCAGGTAAAT AGGTAGCTAGATAGGCAGGTAG ATAGGTAGGT chr1:22260763-22261263 + 25 9.00e-08 TGCAGGTGTG CGGCAAGTGTGCATGTAGGTGT GCAGCAGGTG chr9:93671043-93671543 + 39 1.12e-07 GTAGGCACAG GTGCAGATGCAGATGTGGGTGT GGGAGTAGGG chr5:1545403-1545903 - 10 1.38e-07 GTGTGCAGAG GTACAGATGTGCATGCAGGTGG TGTGCAGAG chr8:144222437-144222937 + 73 1.53e-07 gtaggtacag atgcaggtatggatgcaggcac aggtgc chr17:45449586-45450086 - 8 1.53e-07 GTAGGTGGCT GAGCAGGTGGCTAGGTGGATGG GTAGGTA chr10:86283858-86284358 - 60 2.28e-07 ATGCAGGTGT GTGCATGAGGGCAGGTGTGTAT ATGCAGGCGT chr10:1571658-1572158 + 24 3.04e-07 gcaggcgagt aggcaggtgagtgtgctggtga gtggaaaggt chr10:1571857-1572357 + 4 3.04e-07 agt gtgcaggtgagtggacaggtga gtgtgctggt chr13:27990684-27991184 + 73 3.04e-07 ataggtatat gtatatgtatatgtataggtat aggtat chr13:113557054-11355755 + 58 3.34e-07 aatgtccctc atgtgggtggggttgtgtgcgt gggtgtgtgt chr1:839323-839823 - 68 4.01e-07 GTGCGTCCAG GTGTGTGTGTCCAGGTGTGTGT GTCTAGGTGT chr19:11209870-11210370 - 14 5.73e-07 GGTGAGAGGT GGACAGGTGAGAAGGTGGGCAG GTGAGGGGAT chr1:17675868-17676368 + 42 1.12e-06 gcaggtgtac gtgcaggcatgggtgcaggcgt gggtgcaggt chr19:2636761-2637261 - 39 1.21e-06 GTGAGGACAA GTGGAGTTGGAGGTGCAGGTGG GGACAGAGGT chr21:45433808-45434308 + 26 1.21e-06 TGCATGAGCC AGGTGTGTGAGCAGGTGCATGG GCCAGGTGTG chr19:11210110-11210610 - 40 1.65e-06 ATGAGAAGAT GAACAAGTGAGGAGGTGGACAG ATAAGGAGAC chr10:7311206-7311706 - 2 1.65e-06 TTTACATTCT TAGCAGGTGAATTTGCAGATAG A chr17:64796454-64796954 - 58 1.92e-06 GCAGGTGGCT AGGTGGATGGTTAGGTGGATGA GCAGATGGTT chr20:63815398-63815898 + 66 2.07e-06 ggtgcagtga gtgcaggtgggcataggtgcag tgagtgcagG chr19:38374258-38374758 + 37 2.07e-06 TGGAACCGTG AGGTGGGTAGGGGGGGTGGTGT TGAGACAGCT chr1:1340850-1341350 - 77 4.16e-06 GA AGGTGTGCGTGCAGGTGTGCAT GTGCAGGCGT chr6:52482899-52483399 - 12 4.16e-06 ACTAACCACA ATGTAATTAAACAGATGCATAT CACAATCAGT chr19:36604733-36605233 - 37 4.74e-06 GAGGGAGACT GTGTGATTGTGTTTGTGTGTGC CGTTCTGTGG chr9:86983548-86984048 - 64 6.92e-06 ATTCAGATAT GAGTAAAAAGATATGTTGGTAA TAAAGCCAAA chr6:151452090-151452590 - 20 1.31e-05 GGCCAGCGGA GGGCGACTAGAGGAGCGGATAT GGAAGCGAGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKGYAGGTRDRBAKGYRGGTRK MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:1844655-1845155 1e-10 31_[-3]_47 chr20:61218123-61218623 2.1e-10 30_[+3]_48 chr1:15675655-15676155 2.7e-10 75_[-3]_3 chr21:36257658-36258158 3e-09 18_[+3]_60 chr9:93672479-93672979 4.7e-09 76_[+3]_2 chr13:35762896-35763396 4.7e-09 59_[-3]_19 chr9:135563163-135563663 5.5e-09 68_[+3]_10 chr1:27668893-27669393 9.8e-09 39_[-3]_39 chr1:53555949-53556449 1.3e-08 62_[+3]_16 chr1:230588390-230588890 1.5e-08 26_[+3]_52 chr10:131850812-13185131 2.2e-08 34_[-3]_44 chr1:17675618-17676118 2.5e-08 53_[+3]_25 chr1:209770546-209771046 2.8e-08 2_[+3]_76 chr14:99551250-99551750 3.2e-08 16_[+3]_62 chr7:98548317-98548817 3.2e-08 34_[-3]_44 chr8:350619-351119 4.1e-08 76_[+3]_2 chr1:53555724-53556224 5.1e-08 56_[+3]_22 chr8:350416-350916 5.8e-08 77_[+3]_1 chr7:98548102-98548602 9e-08 33_[-3]_45 chr1:22260763-22261263 9e-08 24_[+3]_54 chr9:93671043-93671543 1.1e-07 38_[+3]_40 chr5:1545403-1545903 1.4e-07 9_[-3]_69 chr8:144222437-144222937 1.5e-07 72_[+3]_6 chr17:45449586-45450086 1.5e-07 7_[-3]_71 chr10:86283858-86284358 2.3e-07 59_[-3]_19 chr10:1571658-1572158 3e-07 23_[+3]_55 chr10:1571857-1572357 3e-07 3_[+3]_75 chr13:27990684-27991184 3e-07 72_[+3]_6 chr13:113557054-11355755 3.3e-07 57_[+3]_21 chr1:839323-839823 4e-07 67_[-3]_11 chr19:11209870-11210370 5.7e-07 13_[-3]_65 chr1:17675868-17676368 1.1e-06 41_[+3]_37 chr19:2636761-2637261 1.2e-06 38_[-3]_40 chr21:45433808-45434308 1.2e-06 25_[+3]_53 chr19:11210110-11210610 1.7e-06 39_[-3]_39 chr10:7311206-7311706 1.7e-06 1_[-3]_77 chr17:64796454-64796954 1.9e-06 57_[-3]_21 chr20:63815398-63815898 2.1e-06 65_[+3]_13 chr19:38374258-38374758 2.1e-06 36_[+3]_42 chr1:1340850-1341350 4.2e-06 76_[-3]_2 chr6:52482899-52483399 4.2e-06 11_[-3]_67 chr19:36604733-36605233 4.7e-06 36_[-3]_42 chr9:86983548-86984048 6.9e-06 63_[-3]_15 chr6:151452090-151452590 1.3e-05 19_[-3]_59 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKGYAGGTRDRBAKGYRGGTRK MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RKGYAGGTRDRBAKGYRGGTRK width=22 seqs=44 chr5:1844655-1845155 ( 32) GTGTAGGTGTAGATGTAGATGT 1 chr20:61218123-61218623 ( 31) GTGCAGGTGTAGATGTAGATGT 1 chr1:15675655-15676155 ( 76) AGGTAGGTAGGTAGGTAGGTAG 1 chr21:36257658-36258158 ( 19) ATGTAGTTAGGTAGGTAGGTAG 1 chr9:93672479-93672979 ( 77) GTACAGGTGTAGATGCAGGTAT 1 chr13:35762896-35763396 ( 60) GTGTAGGTGTTTATGTGTGTAT 1 chr9:135563163-135563663 ( 69) GAGTAGGTGAACAGGTGGGTGG 1 chr1:27668893-27669393 ( 40) ATGCAGGTAAAGATGCGGGTAA 1 chr1:53555949-53556449 ( 63) AGGTGTGTGTGTATGCAGGTGT 1 chr1:230588390-230588890 ( 27) AGGTAAGTAGGTAGGTGTGTGG 1 chr10:131850812-13185131 ( 35) GTGTGGGTGGAAAGGTATGTGT 1 chr1:17675618-17676118 ( 54) GTGCAGGTGTAGGTGCAGGCAT 1 chr1:209770546-209771046 ( 3) GTGCAGGTGGAGGTGTGCGTGT 1 chr14:99551250-99551750 ( 17) AGGTAAGTGAGCAAGTGGGTGT 1 chr7:98548317-98548817 ( 35) AGGTAGGTAGGCAAGTAGATAG 1 chr8:350619-351119 ( 77) TGGCAGGTAGACAGGTAGGTAG 1 chr1:53555724-53556224 ( 57) AGGTGTGTGTGTGTGCAGGTAT 1 chr8:350416-350916 ( 78) AAGCAGGTAGGAAGGTAGATAG 1 chr7:98548102-98548602 ( 34) AGGTAGCTAGATAGGCAGGTAG 1 chr1:22260763-22261263 ( 25) CGGCAAGTGTGCATGTAGGTGT 1 chr9:93671043-93671543 ( 39) GTGCAGATGCAGATGTGGGTGT 1 chr5:1545403-1545903 ( 10) GTACAGATGTGCATGCAGGTGG 1 chr8:144222437-144222937 ( 73) ATGCAGGTATGGATGCAGGCAC 1 chr17:45449586-45450086 ( 8) GAGCAGGTGGCTAGGTGGATGG 1 chr10:86283858-86284358 ( 60) GTGCATGAGGGCAGGTGTGTAT 1 chr10:1571658-1572158 ( 24) AGGCAGGTGAGTGTGCTGGTGA 1 chr10:1571857-1572357 ( 4) GTGCAGGTGAGTGGACAGGTGA 1 chr13:27990684-27991184 ( 73) GTATATGTATATGTATAGGTAT 1 chr13:113557054-11355755 ( 58) ATGTGGGTGGGGTTGTGTGCGT 1 chr1:839323-839823 ( 68) GTGTGTGTGTCCAGGTGTGTGT 1 chr19:11209870-11210370 ( 14) GGACAGGTGAGAAGGTGGGCAG 1 chr1:17675868-17676368 ( 42) GTGCAGGCATGGGTGCAGGCGT 1 chr19:2636761-2637261 ( 39) GTGGAGTTGGAGGTGCAGGTGG 1 chr21:45433808-45434308 ( 26) AGGTGTGTGAGCAGGTGCATGG 1 chr19:11210110-11210610 ( 40) GAACAAGTGAGGAGGTGGACAG 1 chr10:7311206-7311706 ( 2) TAGCAGGTGAATTTGCAGATAG 1 chr17:64796454-64796954 ( 58) AGGTGGATGGTTAGGTGGATGA 1 chr20:63815398-63815898 ( 66) GTGCAGGTGGGCATAGGTGCAG 1 chr19:38374258-38374758 ( 37) AGGTGGGTAGGGGGGGTGGTGT 1 chr1:1340850-1341350 ( 77) AGGTGTGCGTGCAGGTGTGCAT 1 chr6:52482899-52483399 ( 12) ATGTAATTAAACAGATGCATAT 1 chr19:36604733-36605233 ( 37) GTGTGATTGTGTTTGTGTGTGC 1 chr9:86983548-86984048 ( 64) GAGTAAAAAGATATGTTGGTAA 1 chr6:151452090-151452590 ( 20) GGGCGACTAGAGGAGCGGATAT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKGYAGGTRDRBAKGYRGGTRK MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 22 n= 47400 bayes= 11.6061 E= 7.4e-043 88 -361 91 -229 -71 -1210 39 117 -97 -1210 168 -1210 -1210 78 -361 117 175 -1210 -15 -1210 -29 -1210 125 -48 -129 -261 148 -129 -229 -261 -1210 203 61 -1210 125 -1210 3 -361 56 61 80 -261 91 -229 -171 -2 20 61 166 -1210 -29 -171 -171 -1210 64 117 -129 -1210 171 -1210 -1210 20 -261 152 110 -1210 71 -171 -1210 -202 139 -12 17 -1210 143 -1210 -1210 -61 -1210 188 117 -1210 85 -1210 -97 -261 39 110 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKGYAGGTRDRBAKGYRGGTRK MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 22 nsites= 44 E= 7.4e-043 0.409091 0.022727 0.522727 0.045455 0.136364 0.000000 0.363636 0.500000 0.113636 0.000000 0.886364 0.000000 0.000000 0.477273 0.022727 0.500000 0.750000 0.000000 0.250000 0.000000 0.181818 0.000000 0.659091 0.159091 0.090909 0.045455 0.772727 0.090909 0.045455 0.045455 0.000000 0.909091 0.340909 0.000000 0.659091 0.000000 0.227273 0.022727 0.409091 0.340909 0.386364 0.045455 0.522727 0.045455 0.068182 0.272727 0.318182 0.340909 0.704545 0.000000 0.227273 0.068182 0.068182 0.000000 0.431818 0.500000 0.090909 0.000000 0.909091 0.000000 0.000000 0.318182 0.045455 0.636364 0.477273 0.000000 0.454545 0.068182 0.000000 0.068182 0.727273 0.204545 0.250000 0.000000 0.750000 0.000000 0.000000 0.181818 0.000000 0.818182 0.500000 0.000000 0.500000 0.000000 0.113636 0.045455 0.363636 0.477273 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RKGYAGGTRDRBAKGYRGGTRK MEME-3 regular expression -------------------------------------------------------------------------------- [GA][TG]G[TC][AG]GGT[GA][GTA][GA][TGC][AG][TG]G[TC][AG][GT][GA]T[AG][TG] -------------------------------------------------------------------------------- Time 1768.09 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr9:35079774-35080274 1.76e-01 100 chr8:630793-631293 4.10e-02 100 chr17:58417377-58417877 3.20e-02 100 chr10:126247447-12624794 1.00e+00 100 chr6:90895482-90895982 7.56e-01 100 chr17:2399619-2400119 9.70e-01 100 chr5:43017841-43018341 5.05e-01 100 chr10:5548763-5549263 1.37e-01 100 chr6:90368966-90369466 9.96e-01 100 chr10:110210839-11021133 1.84e-01 100 chr1:80403332-80403832 5.99e-01 100 chr1:1615371-1615871 2.74e-01 100 chr1:228378503-228379003 4.73e-01 100 chr1:224929281-224929781 3.57e-01 100 chr7:116211190-116211690 3.47e-01 100 chr5:124747154-124747654 7.24e-02 100 chr19:44051583-44052083 5.25e-01 100 chr1:85297815-85298315 6.54e-02 100 chr20:41339855-41340355 2.98e-05 30_[-1(9.07e-07)]_48 chr14:103333660-10333416 9.39e-01 100 chr17:79839559-79840059 6.74e-01 100 chr20:53828147-53828647 8.08e-01 100 chr1:161399457-161399957 8.61e-01 100 chr5:81422640-81423140 2.21e-01 100 chr21:36909854-36910354 3.30e-01 100 chr5:113203239-113203739 8.88e-01 100 chr15:75625526-75626026 5.67e-01 100 chr14:55027010-55027510 1.21e-01 100 chr5:66981751-66982251 4.98e-03 65_[+2(4.76e-05)]_21 chr19:2529477-2529977 6.30e-01 100 chr1:1064101-1064601 1.11e-01 100 chr15:74374454-74374954 3.64e-02 3_[+2(6.80e-05)]_30_[+2(1.93e-05)]_\ 39 chr1:228377636-228378136 3.83e-03 47_[-2(6.80e-05)]_39 chr6:75524318-75524818 8.98e-01 100 chr19:40715554-40716054 1.87e-01 100 chr16:30021319-30021819 1.83e-01 100 chr1:232704711-232705211 6.68e-01 100 chr7:100673352-100673852 9.87e-01 100 chr19:35717070-35717570 6.03e-01 100 chr7:133492120-133492620 6.03e-01 100 chr12:49296674-49297174 1.97e-02 22_[+2(5.87e-05)]_64 chr12:80187690-80188190 9.82e-01 100 chr12:104064189-10406468 9.11e-01 100 chr19:11344301-11344801 3.30e-02 100 chr14:64986737-64987237 1.60e-01 100 chr11:118252066-11825256 3.47e-02 100 chr12:806367-806867 6.03e-01 100 chr5:139517791-139518291 8.18e-01 100 chr10:110916481-11091698 8.74e-02 45_[-3(9.22e-05)]_33 chrX:153319921-153320421 2.64e-05 11_[-2(2.34e-06)]_4_[-2(5.87e-05)]_\ 4_[-2(5.87e-05)]_4_[-2(5.87e-05)]_4_[-2(9.97e-06)]_3 chr16:29943959-29944459 1.81e-02 73_[+3(5.18e-05)]_5 chr5:137754429-137754929 1.24e-01 100 chr7:70092372-70092872 1.81e-02 29_[+3(3.52e-05)]_49 chr17:79993497-79993997 8.73e-01 100 chrX:41084835-41085335 3.30e-01 100 chr1:163321659-163322159 2.17e-01 100 chr12:50025358-50025858 1.35e-01 100 chr1:230978760-230979260 9.86e-01 100 chr1:3402109-3402609 1.06e-01 100 chr18:109161-109661 2.77e-01 100 chr6:27230315-27230815 7.11e-02 100 chr5:10601294-10601794 5.16e-02 100 chr11:9565894-9566394 1.00e+00 100 chr12:1592662-1593162 8.18e-03 1_[-2(6.17e-05)]_85 chr6:49541148-49541648 1.02e-01 100 chr1:227563510-227564010 9.99e-01 100 chr17:81393857-81394357 9.96e-01 100 chr6:2021659-2022159 7.83e-01 100 chr18:50629060-50629560 9.73e-01 100 chr3:9396959-9397459 3.71e-01 100 chr1:70509856-70510356 7.69e-02 100 chr5:90547052-90547552 2.86e-01 100 chr11:27209517-27210017 1.79e-01 100 chr7:114530031-114530531 8.60e-01 100 chr19:1021412-1021912 4.05e-01 100 chr10:12720315-12720815 1.26e-01 100 chr14:32134486-32134986 1.53e-01 100 chr12:26274586-26275086 9.72e-01 100 chr8:350619-351119 1.09e-10 8_[+3(1.29e-08)]_22_[+3(2.97e-09)]_\ 2_[+3(4.06e-08)]_2 chr19:17305342-17305842 8.24e-01 100 chr16:25049569-25050069 6.25e-01 100 chr15:66386426-66386926 2.58e-02 56_[-2(6.48e-05)]_30 chr1:237166630-237167130 9.72e-01 100 chr1:146051951-146052451 8.10e-01 100 chr8:10959981-10960481 1.09e-07 25_[+2(9.74e-08)]_5_[+2(6.16e-07)]_\ 5_[+2(2.47e-07)]_5_[+2(9.74e-08)]_4 chr6:16712780-16713280 7.05e-01 100 chr7:74079296-74079796 9.63e-01 100 chr3:168974988-168975488 2.99e-01 100 chr19:17606085-17606585 2.08e-01 100 chr5:14580228-14580728 5.90e-01 100 chr10:63268977-63269477 7.75e-01 100 chr1:229558794-229559294 6.94e-01 100 chr3:194140644-194141144 9.84e-01 100 chr9:12814245-12814745 4.81e-01 100 chr12:110468295-11046879 8.48e-01 100 chr6:30717230-30717730 9.43e-01 100 chr17:64796454-64796954 5.53e-11 9_[-2(1.78e-05)]_2_[-3(2.49e-08)]_\ 22_[-3(1.53e-07)]_9 chr19:2236329-2236829 2.74e-01 100 chr14:31026549-31027049 5.27e-01 100 chr14:100192666-10019316 9.82e-01 100 chr6:125050651-125051151 8.34e-01 100 chr20:297173-297673 7.99e-01 100 chr3:172140718-172141218 6.60e-01 100 chr1:81032883-81033383 8.37e-01 100 chr7:98476712-98477212 7.03e-01 100 chr1:145465458-145465958 9.28e-01 100 chr22:35364154-35364654 1.48e-01 100 chr19:41884133-41884633 2.90e-02 100 chr3:157475986-157476486 7.06e-01 100 chr6:35259211-35259711 8.10e-01 100 chr1:16644413-16644913 2.03e-01 100 chr19:40602141-40602641 3.82e-03 1_[+2(6.90e-06)]_85 chr17:45148442-45148942 2.93e-02 100 chr10:72800371-72800871 9.98e-01 100 chr19:8389767-8390267 2.82e-01 100 chr10:86283858-86284358 4.64e-14 4_[-1(3.22e-09)]_9_[-2(2.34e-06)]_\ 10_[-3(2.28e-07)]_[-2(1.99e-08)]_5 chr14:30625483-30625983 1.81e-10 13_[+3(4.57e-08)]_17_[+1(1.60e-05)]_\ 26 chr6:52482899-52483399 2.88e-03 11_[-3(4.16e-06)]_67 chr19:38224230-38224730 7.42e-07 11_[-1(1.12e-07)]_67 chr19:40348256-40348756 2.65e-01 100 chr22:42965005-42965505 8.16e-01 100 chr19:30662181-30662681 6.47e-01 100 chr1:233635918-233636418 5.01e-01 100 chr1:234612503-234613003 6.55e-01 100 chr1:30824005-30824505 1.82e-01 100 chr19:34734054-34734554 1.00e+00 100 chr1:228861081-228861581 1.95e-01 100 chr5:140295314-140295814 6.71e-01 100 chr7:158097521-158098021 3.38e-01 100 chr3:181328996-181329496 7.35e-01 100 chr8:25998525-25999025 2.36e-01 100 chr18:79832124-79832624 3.96e-09 [-2(1.65e-06)]_[-2(1.93e-05)]_13_\ [-1(1.59e-08)]_2_[-1(2.77e-07)]_13 chr12:54033407-54033907 4.51e-01 100 chr6:37819214-37819714 5.42e-01 100 chr6:169396219-169396719 2.66e-01 100 chr2:47176443-47176943 9.33e-02 100 chr6:2985908-2986408 6.07e-01 100 chr20:45972045-45972545 8.72e-01 100 chr4:118327841-118328341 8.99e-01 100 chr1:224623817-224624317 6.25e-01 100 chr7:73738815-73739315 4.79e-02 100 chr3:42819868-42820368 5.57e-01 100 chr5:59303198-59303698 2.87e-01 100 chr12:65169171-65169671 5.10e-01 100 chr14:20662864-20663364 2.09e-02 100 chr8:109611120-109611620 6.65e-01 100 chr1:225508441-225508941 9.30e-01 100 chr1:36464111-36464611 6.48e-01 100 chr11:47578692-47579192 1.40e-04 15_[-2(5.87e-05)]_6_[-1(4.28e-06)]_\ 43 chr12:66169614-66170114 6.46e-01 100 chr9:86983548-86984048 1.58e-03 63_[-3(6.92e-06)]_15 chr7:100335958-100336458 9.99e-01 100 chr18:105755-106255 9.94e-01 100 chr1:3403725-3404225 8.12e-02 100 chr17:1080712-1081212 3.18e-01 100 chr6:41787305-41787805 5.01e-01 100 chr7:149028585-149029085 3.47e-01 100 chr19:14217384-14217884 2.49e-02 100 chr10:73966173-73966673 6.17e-01 100 chr21:43857404-43857904 1.03e-01 100 chr4:128393120-128393620 9.00e-01 100 chr17:18087705-18088205 9.80e-01 100 chr12:89769185-89769685 8.22e-01 100 chr3:138833428-138833928 1.12e-01 100 chr12:106074973-10607547 8.03e-01 100 chr15:41230790-41231290 1.00e+00 100 chr14:101073134-10107363 9.44e-01 100 chr19:4575288-4575788 5.67e-01 100 chr2:177263377-177263877 8.94e-01 100 chr5:116766522-116767022 9.53e-01 100 chr5:136729877-136730377 1.89e-01 100 chr7:114417991-114418491 3.94e-01 100 chr12:54052026-54052526 9.58e-01 100 chr1:225653577-225654077 1.15e-02 33_[+1(4.64e-05)]_45 chr22:29388219-29388719 4.34e-01 100 chr16:71808725-71809225 1.44e-01 100 chr1:155017285-155017785 5.26e-02 100 chr1:220089696-220090196 8.86e-02 100 chr3:71102146-71102646 9.55e-01 100 chr13:113557054-11355755 9.17e-13 7_[+2(1.10e-06)]_5_[+1(9.32e-10)]_\ 30_[+1(9.64e-09)] chr14:24366893-24367393 3.77e-01 100 chr1:198763233-198763733 9.08e-01 100 chr6:125913869-125914369 5.81e-01 100 chr2:46481535-46482035 4.13e-01 100 chr6:125956558-125957058 4.05e-01 100 chr19:45265298-45265798 5.49e-10 1_[+2(1.09e-05)]_18_[+1(4.93e-07)]_\ 19_[+1(1.63e-07)]_4 chr20:35954209-35954709 4.51e-01 100 chr5:66144151-66144651 4.81e-01 100 chr6:159726771-159727271 1.17e-02 100 chr10:35195673-35196173 7.02e-01 100 chr10:3197576-3198076 5.93e-01 100 chr11:36149639-36150139 4.92e-01 100 chr19:10416622-10417122 9.35e-01 100 chr1:28736455-28736955 5.25e-01 100 chr10:121831744-12183224 8.15e-01 100 chr11:69498446-69498946 4.78e-11 6_[+2(2.93e-05)]_4_[+3(1.54e-05)]_9_\ [+1(1.10e-08)]_23 chr5:154754791-154755291 1.14e-02 100 chr1:10210048-10210548 9.26e-01 100 chr22:19984259-19984759 6.72e-01 100 chr15:69414086-69414586 1.88e-01 100 chr16:3152414-3152914 6.84e-01 100 chr2:70142558-70143058 4.67e-01 100 chr21:32771761-32772261 9.23e-01 100 chr1:211258758-211259258 1.00e+00 100 chr9:138149930-138150430 8.95e-01 100 chr16:1782541-1783041 8.47e-01 100 chr1:226122527-226123027 5.48e-01 100 chr6:47477379-47477879 5.16e-01 100 chr13:113592990-11359349 2.05e-02 100 chr17:81926645-81927145 2.51e-01 100 chr20:50731018-50731518 8.05e-01 100 chr19:55259040-55259540 6.26e-01 100 chr7:151426360-151426860 6.66e-01 100 chr10:22552816-22553316 3.04e-01 100 chr19:40219726-40220226 7.79e-01 100 chr10:22229190-22229690 2.52e-01 100 chr12:25333765-25334265 5.48e-01 100 chr10:122980266-12298076 9.21e-01 100 chr19:10333076-10333576 1.42e-01 100 chrX:41333190-41333690 2.37e-01 100 chr1:15675655-15676155 3.07e-12 19_[-3(2.66e-10)]_10_[-3(1.13e-08)]_\ 2_[-3(2.66e-10)]_3 chr8:22244962-22245462 6.35e-01 100 chr1:228781105-228781605 8.15e-01 100 chr1:59214647-59215147 2.23e-01 100 chr1:225655408-225655908 8.95e-01 100 chr17:17280818-17281318 2.51e-01 100 chr16:10743651-10744151 4.41e-01 100 chr5:181222133-181222633 9.08e-01 100 chr1:244970837-244971337 3.43e-01 100 chr3:184249516-184250016 5.92e-01 100 chr1:228139833-228140333 7.24e-01 100 chr22:37905006-37905506 9.71e-01 100 chr12:8082009-8082509 7.46e-01 100 chr1:183060420-183060920 7.60e-01 100 chr16:73070478-73070978 8.74e-02 100 chr1:1340850-1341350 2.19e-16 10_[-2(4.26e-09)]_17_[-1(5.39e-11)]_\ 17_[-2(2.47e-07)]_6 chr10:102151944-10215244 9.34e-01 100 chr20:53609848-53610348 4.60e-03 35_[+3(7.96e-05)]_43 chr5:67015615-67016115 9.06e-01 100 chr19:267138-267638 4.53e-01 100 chr1:1658897-1659397 4.10e-01 100 chr7:148339258-148339758 9.99e-01 100 chr5:61408472-61408972 9.26e-01 100 chr19:36331438-36331938 1.83e-01 100 chr15:65610913-65611413 9.71e-01 100 chr10:71266277-71266777 1.05e-03 27_[+3(6.33e-05)]_51 chr17:78840911-78841411 2.95e-01 100 chr19:8529392-8529892 3.14e-01 100 chr17:68511915-68512415 2.15e-05 31_[+2(5.11e-06)]_55 chr17:59619512-59620012 1.83e-01 100 chr15:96356870-96357370 4.21e-01 100 chr16:2915981-2916481 1.74e-02 34_[-3(7.11e-05)]_44 chr6:89977823-89978323 5.51e-01 100 chr9:1458422-1458922 8.44e-01 100 chr16:28863267-28863767 9.85e-01 100 chr22:37607020-37607520 6.20e-02 22_[+2(8.10e-05)]_64 chr1:244665794-244666294 9.65e-01 100 chr1:226062591-226063091 7.48e-02 100 chr5:69521095-69521595 5.00e-01 100 chr12:95217702-95218202 7.39e-01 100 chr15:71747481-71747981 4.78e-01 100 chr16:46883816-46884316 9.33e-02 100 chr17:42017346-42017846 2.62e-01 100 chr4:173252283-173252783 6.77e-01 100 chr17:82458140-82458640 7.90e-01 100 chr16:2682164-2682664 8.74e-01 100 chr18:48998082-48998582 9.80e-01 100 chr10:3420689-3421189 3.33e-08 8_[+1(1.63e-07)]_51_[+2(1.41e-05)]_\ 5 chr10:133764448-13376494 6.62e-01 100 chr1:110338217-110338717 1.95e-01 100 chr10:12448696-12449196 9.94e-01 100 chr19:38374258-38374758 1.11e-03 36_[+3(2.07e-06)]_42 chr22:24727040-24727540 2.92e-01 100 chr16:2251631-2252131 8.74e-02 100 chr5:124908856-124909356 1.31e-01 100 chr2:65432450-65432950 3.83e-01 100 chr22:41832539-41833039 3.45e-02 60_[+3(9.56e-05)]_18 chr5:140174969-140175469 9.17e-01 100 chr6:1630614-1631114 4.64e-01 100 chr12:68808674-68809174 7.54e-01 100 chr10:7302362-7302862 4.29e-01 100 chr16:30558208-30558708 4.08e-01 100 chr6:158040348-158040848 3.54e-01 100 chr13:41061235-41061735 4.40e-01 100 chr6:151452090-151452590 1.18e-03 19_[-3(1.31e-05)]_59 chr2:178414743-178415243 1.32e-01 100 chr1:229221406-229221906 2.62e-02 8_[+1(6.68e-05)]_70 chr21:37267378-37267878 9.35e-01 100 chr16:4944707-4945207 7.18e-01 100 chr10:17228359-17228859 4.19e-01 100 chr5:14156492-14156992 6.12e-01 100 chr17:46101218-46101718 3.87e-01 100 chr22:38701219-38701719 4.77e-01 100 chr10:665558-666058 8.52e-01 100 chr5:180861295-180861795 3.38e-05 10_[+2(5.58e-05)]_8_[-2(2.97e-06)]_\ 54 chr17:77233818-77234318 5.21e-01 100 chr11:59550340-59550840 3.08e-01 100 chr5:92552235-92552735 4.65e-01 100 chr19:36139782-36140282 6.63e-01 100 chr10:72354661-72355161 3.20e-02 58_[+1(5.00e-05)]_20 chr13:50357564-50358064 1.68e-01 100 chr13:113617269-11361776 9.61e-06 30_[-2(7.12e-05)]_1_[-1(9.07e-07)]_\ 10_[-1(9.07e-07)]_1 chr16:31033046-31033546 3.59e-01 100 chr17:67978522-67979022 6.75e-01 100 chr16:29807629-29808129 2.52e-01 100 chr11:65570034-65570534 9.77e-01 100 chr5:116574671-116575171 1.27e-04 76_[+1(3.28e-07)]_2 chr5:56123693-56124193 1.18e-02 75_[+1(4.47e-05)]_3 chr1:228457444-228457944 7.89e-01 100 chr16:1271724-1272224 9.31e-01 100 chr20:61218123-61218623 5.22e-17 7_[+1(5.61e-10)]_1_[+3(2.13e-10)]_3_\ [+1(1.01e-07)]_1_[+3(1.12e-06)] chr19:42268143-42268643 3.90e-01 100 chr5:176388724-176389224 2.52e-02 100 chr6:28589245-28589745 9.89e-01 100 chr9:131373536-131374036 7.22e-01 100 chr16:30430003-30430503 4.90e-03 100 chr8:144222665-144223165 1.85e-08 16_[+2(8.29e-07)]_13_[+1(2.33e-07)]_\ 8_[+1(4.04e-06)]_5 chr10:1048899-1049399 9.96e-01 100 chr5:175378373-175378873 5.20e-01 100 chr8:33513426-33513926 2.31e-01 100 chr14:22982558-22983058 2.59e-03 100 chr8:89984242-89984742 1.35e-01 100 chr17:7484232-7484732 2.58e-01 100 chr19:29696185-29696685 2.39e-05 [-2(3.33e-06)]_18_[-2(1.87e-06)]_54 chr1:182616088-182616588 1.73e-01 100 chr1:67686545-67687045 5.61e-01 100 chr16:30065114-30065614 9.97e-01 100 chr1:8626333-8626833 4.58e-02 17_[-3(3.52e-05)]_61 chr17:71438646-71439146 3.25e-01 100 chr20:44728734-44729234 3.70e-01 100 chr8:37359491-37359991 5.83e-01 100 chr17:48492603-48493103 3.56e-01 100 chr13:113594047-11359454 4.86e-01 100 chr1:30270390-30270890 2.53e-08 23_[-2(2.57e-05)]_5_[-3(7.42e-07)]_\ 16_[-2(5.03e-05)]_6 chr12:122965999-12296649 4.66e-01 100 chr5:43064755-43065255 9.66e-01 100 chr20:43657246-43657746 8.95e-02 100 chr8:125429953-125430453 2.80e-01 100 chr1:28648615-28649115 3.13e-01 100 chrX:24054434-24054934 7.62e-01 100 chr10:5889780-5890280 4.63e-01 100 chr20:50165950-50166450 6.97e-01 100 chr11:111879070-11187957 8.48e-02 100 chr15:70526450-70526950 9.93e-01 100 chr17:60392113-60392613 6.09e-01 100 chr19:35510297-35510797 3.87e-01 100 chr8:37380738-37381238 9.82e-01 100 chr1:113904944-113905444 5.07e-01 100 chr5:124740951-124741451 8.55e-01 100 chr5:5340266-5340766 8.25e-01 100 chr22:19168243-19168743 1.16e-04 32_[-2(2.23e-05)]_10_[-2(1.19e-05)]_\ 30 chr19:33176893-33177393 1.33e-01 100 chr1:89524960-89525460 8.21e-01 100 chr9:137494516-137495016 4.47e-02 100 chr16:1826890-1827390 8.33e-01 100 chr1:161765015-161765515 6.36e-01 100 chr5:69369417-69369917 5.08e-01 100 chr12:89352463-89352963 9.25e-02 100 chr7:3582070-3582570 9.98e-01 100 chr5:180293516-180294016 3.33e-03 54_[-2(1.41e-05)]_32 chr7:80883509-80884009 9.89e-01 100 chr1:228902922-228903422 3.03e-02 76_[-1(6.00e-05)]_2 chr1:220119010-220119510 3.20e-01 100 chr1:159916143-159916643 7.66e-01 100 chr21:45433808-45434308 8.56e-10 4_[+2(4.62e-07)]_4_[+1(9.07e-07)]_3_\ [+1(9.07e-07)]_3_[+1(9.07e-07)]_6 chr12:53321297-53321797 2.23e-01 100 chr1:175470992-175471492 1.25e-03 11_[-1(7.95e-05)]_67 chr16:30526872-30527372 9.83e-01 100 chr16:11915938-11916438 8.67e-01 100 chr14:99821640-99822140 2.15e-01 100 chr1:41870086-41870586 3.37e-01 100 chr19:39390760-39391260 7.34e-02 100 chr17:45320830-45321330 9.03e-01 100 chrX:724739-725239 2.91e-04 24_[-2(3.71e-06)]_28_[-2(3.71e-06)]_\ 20 chr16:89142413-89142913 1.15e-10 [-1(1.24e-08)]_30_[-1(1.83e-05)]_26 chr1:233624200-233624700 5.18e-05 34_[-1(2.34e-06)]_9_[-2(1.93e-05)]_\ 21 chr17:82359880-82360380 9.98e-01 100 chr8:25458842-25459342 8.51e-01 100 chr16:29816011-29816511 1.20e-01 100 chr19:40444377-40444877 6.53e-02 69_[+3(9.56e-05)]_9 chr9:93671043-93671543 2.80e-11 3_[+1(6.13e-08)]_13_[+3(1.12e-07)]_\ 14_[+3(8.07e-08)]_4 chr5:181173615-181174115 1.35e-02 100 chr18:28156293-28156793 8.70e-01 100 chr13:112346328-11234682 2.62e-01 100 chr19:40623694-40624194 8.07e-01 100 chr1:148263221-148263721 2.63e-02 100 chr13:41696511-41697011 3.17e-02 100 chr5:88516271-88516771 1.15e-01 73_[+3(8.89e-05)]_5 chrX:73943909-73944409 5.35e-01 100 chr17:83050631-83051131 3.98e-08 3_[+2(2.39e-05)]_4_[+1(3.28e-07)]_\ 57 chr21:46324007-46324507 3.09e-01 100 chr12:12398110-12398610 5.88e-03 7_[+3(9.56e-05)]_71 chr6:79078081-79078581 9.04e-01 100 chr13:110870151-11087065 7.00e-01 100 chr16:12120415-12120915 1.39e-01 100 chr8:37360408-37360908 8.08e-01 100 chr12:45728640-45729140 2.02e-01 100 chr19:40831774-40832274 3.33e-02 100 chr1:2683919-2684419 1.31e-01 100 chr19:38336469-38336969 2.17e-01 100 chr6:27688060-27688560 6.92e-03 100 chr10:23408465-23408965 5.51e-01 100 chr19:32373695-32374195 9.43e-01 100 chr10:21525530-21526030 1.33e-01 100 chr6:125946184-125946684 2.11e-01 100 chr1:234975036-234975536 4.74e-01 100 chr16:14974646-14975146 2.52e-01 100 chr6:2028584-2029084 1.36e-01 100 chr5:6419324-6419824 1.81e-01 100 chr14:104777105-10477760 9.80e-01 100 chr19:47243994-47244494 9.49e-01 100 chr17:75035161-75035661 8.08e-01 100 chr6:56529631-56530131 9.96e-01 100 chr16:25257934-25258434 4.57e-01 100 chr1_KI270713v1_random:2 4.44e-01 100 chr3:194134780-194135280 4.92e-07 72_[-3(2.06e-07)]_6 chr1:26620537-26621037 3.31e-01 100 chr10:102917542-10291804 2.58e-01 100 chr10:68153504-68154004 7.25e-01 100 chr22:40711465-40711965 2.28e-01 100 chr12:117128158-11712865 3.62e-02 33_[-3(8.57e-05)]_45 chr8:1857948-1858448 3.44e-03 10_[+1(6.44e-05)]_2_[+1(7.42e-05)]_\ 2_[+1(4.64e-05)]_20 chr1:229221205-229221705 8.51e-03 69_[-1(5.19e-05)]_9 chr12:64759338-64759838 8.91e-01 100 chr5:69217700-69218200 5.89e-01 100 chr19:18364910-18365410 4.00e-01 100 chr19:36572896-36573396 9.13e-01 100 chr15:72231135-72231635 2.20e-01 100 chr19:40920950-40921450 8.38e-01 100 chr19:36604733-36605233 4.19e-03 36_[-3(4.74e-06)]_42 chr20:18507407-18507907 9.14e-01 100 chr1:233112894-233113394 6.32e-01 100 chr15:98896820-98897320 9.12e-01 100 chr13:45464662-45465162 1.00e+00 100 chr9:18976694-18977194 5.72e-01 100 chr5:124908645-124909145 7.51e-02 100 chr19:38831699-38832199 9.94e-01 100 chr5:1950698-1951198 2.67e-01 100 chr16:86338153-86338653 2.61e-01 100 chr10:72272694-72273194 7.50e-01 100 chr20:5112973-5113473 7.75e-01 100 chr10:93209008-93209508 1.00e+00 100 chr14:103520822-10352132 1.22e-01 100 chr1:148522485-148522985 2.63e-01 100 chr2:241572836-241573336 1.01e-03 34_[-2(3.33e-06)]_27_[-2(3.33e-06)]_\ 11 chr10:7311206-7311706 3.31e-04 1_[-3(1.65e-06)]_77 chr17:83096357-83096857 1.19e-02 6_[+1(9.76e-05)]_72 chr3:9731309-9731809 9.97e-01 100 chr6:27545445-27545945 6.33e-03 33_[+2(5.03e-05)]_53 chr21:33541826-33542326 3.56e-01 100 chr1:225999231-225999731 2.11e-01 100 chr13:27990684-27991184 1.79e-12 [+3(9.00e-08)]_4_[+2(1.41e-05)]_2_\ [+3(8.54e-09)]_[+3(1.00e-07)]_14 chr15:66497593-66498093 7.13e-01 100 chr19:37655790-37656290 9.93e-01 100 chr10:87845974-87846474 9.46e-01 100 chr5:1844655-1845155 4.00e-16 1_[-3(2.06e-07)]_8_[-3(1.05e-10)]_\ 21_[-1(9.64e-09)]_4 chr8:320015-320515 1.26e-11 29_[+1(7.38e-06)]_6_[+1(2.56e-08)]_\ 21 chr1:234700155-234700655 4.76e-01 100 chr6:149545919-149546419 8.90e-01 100 chr5:81169870-81170370 1.20e-02 100 chr12:121672249-12167274 7.71e-01 100 chr13:113625814-11362631 2.59e-02 2_[+2(1.52e-05)]_7_[+2(7.44e-05)]_7_\ [+2(2.93e-05)]_7_[+2(1.52e-05)]_21 chr17:48626374-48626874 9.75e-01 100 chr11:68459812-68460312 4.75e-01 100 chr1:22260763-22261263 1.83e-13 2_[+1(2.78e-09)]_1_[+1(6.13e-08)]_1_\ [+1(1.10e-08)]_1_[+1(3.22e-09)]_7 chr6:30717025-30717525 4.51e-01 100 chr12:124939262-12493976 9.50e-01 100 chr5:96934819-96935319 6.92e-02 100 chr12:56041729-56042229 5.75e-01 100 chr9:135563163-135563663 1.06e-13 4_[+3(3.30e-10)]_2_[+3(8.54e-09)]_\ 18_[+3(5.51e-09)]_10 chr19:1383415-1383915 9.31e-01 100 chr19:2636761-2637261 8.75e-13 2_[-2(7.59e-06)]_4_[-2(6.90e-06)]_4_\ [-3(1.21e-06)]_5_[-1(7.87e-10)]_13 chr1:16122829-16123329 8.62e-01 100 chr4:105708461-105708961 8.84e-01 100 chr8:37479254-37479754 3.67e-01 100 chr19:14267194-14267694 8.72e-01 100 chr17:3890017-3890517 1.25e-01 100 chr19:41926073-41926573 2.76e-04 2_[+2(5.11e-06)]_[+2(7.77e-05)]_17_\ [+2(5.30e-05)]_16_[+2(3.71e-06)]_9 chr17:75904861-75905361 7.84e-01 100 chr1:226186571-226187071 7.19e-01 100 chr1:12478104-12478604 8.85e-01 100 chrX:41084635-41085135 1.67e-01 100 chr12:45727442-45727942 6.55e-02 58_[-3(9.91e-05)]_20 chr1:236168919-236169419 5.65e-09 53_[+1(1.12e-07)]_2_[+1(2.33e-07)]_\ 1 chr15:70494074-70494574 7.76e-01 100 chr11:694060-694560 1.47e-01 100 chr21:46286089-46286589 8.83e-01 100 chr10:7818105-7818605 1.20e-02 30_[-2(7.12e-05)]_11_[-2(2.39e-05)]_\ 31 chr1:40691599-40692099 1.93e-04 59_[+1(4.79e-06)]_19 chr17:45449586-45450086 3.55e-11 7_[-3(1.53e-07)]_6_[-3(4.57e-08)]_\ 18_[-3(2.82e-08)]_3 chr19:11210445-11210945 2.41e-09 [-3(6.58e-05)]_5_[-1(3.28e-07)]_9_\ [-1(9.75e-07)]_6_[-2(3.33e-06)] chr7:80876837-80877337 8.65e-01 100 chr19:34218155-34218655 4.97e-02 100 chr5:124735010-124735510 2.60e-03 57_[+3(3.07e-05)]_21 chr13:35762896-35763396 2.55e-15 1_[-3(1.38e-07)]_5_[-1(1.78e-09)]_3_\ [-2(5.39e-07)]_8_[-3(2.19e-08)]_3 chr8:37393026-37393526 6.62e-01 100 chr1:1000651-1001151 5.84e-01 100 chr7:116218163-116218663 1.95e-01 100 chr9:85743228-85743728 4.88e-01 100 chr5:17305900-17306400 3.13e-01 100 chr10:72204280-72204780 6.42e-02 100 chr1:16132643-16133143 8.87e-10 2_[+2(9.74e-08)]_2_[+1(2.13e-07)]_5_\ [+2(6.16e-07)]_2_[+1(4.96e-08)]_17 chr5:149551454-149551954 6.19e-01 100 chr17:60173283-60173783 9.85e-01 100 chr14:105567443-10556794 2.41e-05 10_[+2(3.85e-07)]_35_[+2(1.61e-07)]_\ 3_[+2(1.61e-07)]_10 chr10:133057992-13305849 3.87e-12 2_[+1(7.42e-05)]_10_[+1(7.87e-10)]_\ 1_[+2(6.17e-05)]_5_[+3(1.46e-05)]_2 chr17:15999373-15999873 5.39e-01 100 chr21:36257658-36258158 1.14e-10 1_[+1(8.18e-06)]_3_[+2(3.14e-05)]_\ [+3(9.83e-09)]_8_[+3(2.51e-07)]_8 chr13:113493265-11349376 1.59e-01 100 chr16:30698087-30698587 9.09e-01 100 chr3:194089467-194089967 1.30e-01 100 chr1:235504692-235505192 4.51e-01 100 chr1:244970638-244971138 6.74e-01 100 chr15:67792434-67792934 7.61e-01 100 chr9:128656624-128657124 9.60e-01 100 chr19:39409313-39409813 1.69e-05 43_[+1(3.02e-07)]_35 chr10:72320644-72321144 5.63e-01 100 chr21:39313509-39314009 8.90e-01 100 chr12:132237196-13223769 1.69e-13 1_[-1(9.64e-09)]_11_[-2(1.19e-05)]_\ 16_[-2(5.29e-08)]_22 chr12:49060537-49061037 2.46e-01 100 chr8:37302610-37303110 9.94e-01 100 chr16:4253949-4254449 8.54e-01 100 chr12:122266239-12226673 5.24e-01 100 chr1:145280990-145281490 7.08e-01 100 chr5:181173412-181173912 4.76e-01 100 chr21:29217744-29218244 1.77e-02 6_[-3(7.67e-05)]_72 chr16:15590836-15591336 7.09e-01 100 chr15:74546088-74546588 9.90e-01 100 chr3:49021613-49022113 3.82e-01 100 chr19:9858697-9859197 9.37e-01 100 chr8:350416-350916 1.22e-11 1_[+3(2.93e-05)]_10_[+3(1.81e-09)]_\ 22_[+3(5.76e-08)]_1 chr1:212608392-212608892 1.23e-01 100 chr6:82260184-82260684 7.21e-01 100 chr13:113666022-11366652 6.77e-01 100 chr10:75379166-75379666 9.94e-01 100 chr5:81169653-81170153 7.57e-03 5_[-3(5.39e-05)]_73 chr16:29805396-29805896 1.21e-01 100 chr6:150418293-150418793 9.40e-01 100 chr2:241572635-241573135 2.53e-03 33_[-2(3.33e-06)]_26_[-2(3.33e-06)]_\ 13 chr6:27602243-27602743 2.62e-02 100 chr10:63707207-63707707 7.89e-01 100 chr5:1157496-1157996 5.05e-11 7_[-1(2.77e-07)]_7_[-1(6.13e-08)]_9_\ [-2(1.64e-08)]_19 chr19:41925133-41925633 9.64e-07 30_[+3(4.44e-06)]_48 chr7:100081637-100082137 9.96e-01 100 chr13:113624851-11362535 3.20e-02 20_[+2(1.52e-05)]_7_[+2(1.52e-05)]_\ 7_[+2(1.52e-05)]_24 chr1:209770546-209771046 2.85e-13 2_[+3(2.82e-08)]_4_[+3(5.73e-07)]_3_\ [+1(5.52e-08)]_25 chr17:8173279-8173779 5.64e-03 75_[+2(4.51e-05)]_11 chr1:148264728-148265228 7.56e-02 100 chr1:234723935-234724435 6.63e-03 100 chr19:37594320-37594820 9.71e-01 100 chr17:78558322-78558822 8.59e-01 100 chr1:93078949-93079449 5.53e-01 100 chr1:16132442-16132942 7.95e-08 10_[+2(1.10e-06)]_7_[+2(3.14e-05)]_\ 2_[+1(2.77e-07)]_31 chr1:155244567-155245067 6.82e-01 100 chr14:90383123-90383623 8.96e-01 100 chr8:1378144-1378644 1.53e-06 4_[-2(4.76e-05)]_4_[-1(9.07e-07)]_7_\ [-1(1.83e-05)]_8_[-2(4.62e-06)]_5 chr20:31723574-31724074 1.54e-01 100 chr16:86337953-86338453 2.85e-01 100 chr19:42242804-42243304 2.96e-01 100 chr1:186375319-186375819 9.42e-01 100 chr1:17675868-17676368 2.18e-16 18_[+1(1.52e-09)]_1_[+3(1.12e-06)]_\ 3_[+1(5.61e-10)]_12 chr1:839323-839823 4.11e-12 [-1(1.24e-08)]_20_[-1(2.56e-08)]_7_\ [-2(5.39e-07)]_[-2(6.26e-06)]_1 chr1:214439432-214439932 5.80e-01 100 chr10:1571857-1572357 2.96e-13 4_[+1(2.56e-08)]_14_[+1(2.56e-08)]_\ 2_[+1(1.78e-09)]_14 chr12:12266907-12267407 2.52e-01 100 chr13:113556852-11355735 8.43e-15 3_[+1(9.32e-10)]_20_[+1(8.31e-08)]_\ 2_[+1(3.73e-09)]_9 chr10:131850812-13185131 1.36e-14 9_[-1(8.47e-09)]_3_[-3(2.19e-08)]_7_\ [-1(8.47e-09)]_15 chr16:71426515-71427015 1.62e-01 100 chr12:132429745-13243024 3.27e-11 3_[-2(3.57e-05)]_16_[-2(4.26e-09)]_\ 26_[-2(4.26e-09)]_13 chr17:82359675-82360175 9.97e-01 100 chr14:105567243-10556774 1.27e-05 24_[+2(1.61e-07)]_3_[+2(1.61e-07)]_\ 3_[+2(2.97e-06)]_3_[+2(1.61e-07)]_11 chr6:169396020-169396520 8.44e-01 100 chr1:236097029-236097529 1.66e-01 100 chr7:98548317-98548817 7.66e-11 2_[-3(9.83e-09)]_10_[-3(3.19e-08)]_\ 10_[-3(5.76e-08)]_12 chr8:144222437-144222937 1.41e-13 20_[+3(1.12e-06)]_3_[+1(1.10e-09)]_\ 5_[+3(1.53e-07)]_6 chr20:63815608-63816108 5.52e-09 12_[+2(1.43e-06)]_10_[+1(1.48e-07)]_\ 10_[+2(1.87e-06)]_1_[+2(4.01e-05)]_3 chr5:1545403-1545903 1.30e-19 9_[-3(1.38e-07)]_7_[-1(5.83e-12)]_2_\ [-1(1.21e-06)]_16 chr1:53555949-53556449 6.70e-17 7_[+1(2.74e-10)]_14_[+2(4.26e-09)]_\ 6_[+1(3.97e-10)]_15 chr22:44730992-44731492 3.47e-02 100 chr11:71448046-71448546 1.11e-07 16_[-2(1.24e-06)]_9_[-2(1.24e-06)]_\ 8_[-1(6.13e-08)]_17 chr4:622624-623124 8.90e-01 100 chr13:113624643-11362514 1.50e-02 15_[+2(1.52e-05)]_71 chr10:133057792-13305829 3.45e-13 1_[+2(1.38e-07)]_11_[+1(7.87e-10)]_\ 10_[+1(7.87e-10)]_20 chr13:33542523-33543023 3.87e-01 100 chr9:93672479-93672979 2.71e-13 4_[+3(4.74e-09)]_14_[+3(4.74e-09)]_\ 14_[+3(4.74e-09)]_2 chr19:11210110-11210610 6.79e-08 6_[-1(5.77e-07)]_11_[-3(1.65e-06)]_\ 5_[-1(3.19e-06)]_12 chr1:53555724-53556224 2.72e-18 3_[+1(1.27e-11)]_5_[+1(8.25e-11)]_5_\ [+1(2.74e-10)]_21 chr11:3257415-3257915 1.24e-01 100 chr1:1123802-1124302 1.14e-12 [-1(8.43e-07)]_5_[-2(4.26e-09)]_4_\ [-1(6.13e-08)]_33 chr10:1571658-1572158 7.60e-10 [+1(2.13e-07)]_1_[+3(3.04e-07)]_10_\ [+2(7.59e-06)]_9_[+3(3.36e-05)] chr19:11209870-11210370 2.12e-10 8_[-1(2.77e-07)]_9_[-1(7.52e-08)]_\ 11_[-2(3.33e-06)]_14 chr20:63815398-63815898 2.60e-09 6_[+2(2.93e-05)]_1_[+2(2.08e-05)]_4_\ [+1(4.93e-07)]_3_[+1(1.59e-06)]_[+2(5.67e-06)] chr1:230588390-230588890 3.09e-15 3_[+1(5.52e-08)]_1_[+3(1.48e-08)]_3_\ [+1(2.78e-09)]_5_[+3(1.12e-06)] chr7:98548102-98548602 3.49e-12 5_[-2(9.87e-05)]_2_[-3(6.09e-10)]_\ 14_[-3(7.22e-08)]_21 chr1:27668893-27669393 4.76e-11 3_[-3(3.60e-08)]_2_[-3(3.60e-08)]_2_\ [-3(3.60e-08)]_2_[-3(1.12e-07)]_3 chr14:99551250-99551750 7.06e-16 16_[+3(3.19e-08)]_11_[+1(5.39e-11)]_\ 5_[+2(1.65e-06)]_10 chr1:17675618-17676118 8.09e-16 6_[+1(1.41e-08)]_2_[+1(2.26e-10)]_1_\ [+3(2.49e-08)]_3_[+1(2.00e-05)] chr20:52424130-52424630 1.83e-10 28_[-2(8.29e-07)]_5_[-1(1.41e-08)]_\ 8_[-1(7.52e-08)]_1 chr1:1123592-1124092 7.28e-13 6_[-1(3.57e-07)]_2_[-1(6.00e-05)]_\ 25_[-2(4.26e-09)]_9 chr16:90032082-90032582 1.30e-10 49_[+1(1.10e-09)]_12_[+2(2.57e-05)]_\ 3 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (3) found. ******************************************************************************** CPU: wotan ********************************************************************************