# DREME 4.12.0
#     command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB7A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB7A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB7A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled
#   positives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB7A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered (Thu May 10 16:13:04 PDT 2018)
#   negatives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB7A.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled (Thu May 10 16:13:04 PDT 2018)
#        host: wotan
#        when: Thu May 10 18:00:59 PDT 2018

MEME version 4.12.0

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.176 C 0.318 G 0.330 T 0.177


MOTIF GACCCCD DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST     GACCCCD    HGGGGTC        106         42   1.0e-008   3.0e-004
#          GACCCCG    CGGGGTC         39         12   7.2e-005   2.1e+000
#          GACCCCA    TGGGGTC         38         14   4.7e-004   1.4e+001
#          GACCCCT    AGGGGTC         40         16   7.2e-004   2.1e+001

letter-probability matrix: alength= 4 w= 7 nsites= 125 E= 3.0e-004
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.312000 0.000000 0.328000 0.360000


MOTIF CGCSGCS DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST     CGCSGCS    SGCSGCG        110         54   1.6e-006   4.6e-002
#          CGCCGCG    CGCGGCG         42         20   2.9e-003   8.3e+001
#          CGCCGCC    GGCGGCG         41         20   4.0e-003   1.2e+002
#          CGCGGCC    GGCCGCG         41         20   4.0e-003   1.2e+002

letter-probability matrix: alength= 4 w= 7 nsites= 126 E= 4.6e-002
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.500000 0.500000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.682540 0.317460 0.000000


# Stopping reason: E-value threshold exceeded
#    Running time: 41.44 seconds