# DREME 4.12.0
#     command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB21.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB21.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB21.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled
#   positives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB21.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered (Thu May 10 16:13:02 PDT 2018)
#   negatives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB21.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled (Thu May 10 16:13:03 PDT 2018)
#        host: wotan
#        when: Thu May 10 17:42:49 PDT 2018

MEME version 4.12.0

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.218 C 0.275 G 0.285 T 0.222


MOTIF ABGTCAY DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST     ABGTCAY    RTGACVT        394         51   4.9e-102   1.6e-097
#          ACGTCAC    GTGACGT        192         12   2.8e-050   9.2e-046
#          ACGTCAT    ATGACGT        144          4   5.2e-042   1.7e-037
#          ATGTCAT    ATGACAT         64         17   2.7e-008   8.9e-004
#          ATGTCAC    GTGACAT         47         11   5.8e-007   1.9e-002
#          AGGTCAT    ATGACCT         27          5   4.6e-005   1.5e+000
#          AGGTCAC    GTGACCT         22          8   7.4e-003   2.5e+002

letter-probability matrix: alength= 4 w= 7 nsites= 525 E= 1.6e-097
1.000000 0.000000 0.000000 0.000000
0.000000 0.640000 0.100952 0.259048
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.525714 0.000000 0.474286


MOTIF RCGTCA DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST      RCGTCA     TGACGY        177         46   2.0e-023   6.3e-019
#           GCGTCA     TGACGC        136         35   1.0e-017   3.3e-013
#           ACGTCA     TGACGT         50         11   1.2e-007   3.8e-003

letter-probability matrix: alength= 4 w= 6 nsites= 206 E= 6.3e-019
0.247573 0.000000 0.752427 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF CGGAAR DREME-3

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST      CGGAAR     YTTCCG        132         51   3.6e-011   1.1e-006
#           CGGAAG     CTTCCG         95         31   7.2e-010   2.2e-005
#           CGGAAA     TTTCCG         46         21   1.2e-003   3.6e+001

letter-probability matrix: alength= 4 w= 6 nsites= 160 E= 1.1e-006
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.293750 0.000000 0.706250 0.000000


MOTIF RTGACTCA DREME-4

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    RTGACTCA   TGAGTCAY         35          1   3.3e-010   1.0e-005
#         ATGACTCA   TGAGTCAT         20          1   9.1e-006   2.8e-001
#         GTGACTCA   TGAGTCAC         16          0   1.4e-005   4.2e-001

letter-probability matrix: alength= 4 w= 8 nsites= 36 E= 1.0e-005
0.555556 0.000000 0.444444 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF CCCGCCCC DREME-5

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    CCCGCCCC   GGGGCGGG         29          3   9.7e-007   3.0e-002
#         CCCGCCCC   GGGGCGGG         29          3   9.7e-007   3.0e-002

letter-probability matrix: alength= 4 w= 8 nsites= 31 E= 3.0e-002
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000


# Stopping reason: E-value threshold exceeded
#    Running time: 89.07 seconds