Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml (DNA)
MOTIF | WIDTH | BEST POSSIBLE MATCH |
---|---|---|
ATGGATGGATGGATGGATGGATGG | 24 | ATGGATGGATGGATGGATGGATGG |
TCCATCCAT | 9 | TCCATCCAT |
TGGATGGAT | 9 | TGGATGGAT |
YCATCCATC | 9 | CCATCCATC |
ATGGATGGA | 9 | ATGGATGGA |
CSCRSKGCMTKCTGGGARWTGTAGTCCW | 28 | CGCGGGGCATGCTGGGAATTGTAGTCCA |
TCYCYYYYTCTCTCYYYCCCTC | 22 | TCCCTCCCTCTCTCTCTCCCTC |
GRRTGGRTGKRTGDRTGKRTGG | 22 | GGGTGGGTGGGTGAGTGGGTGG |
VGAGCGCCGAGC | 12 | CGAGCGCCGAGC |
ATGGATRGATGG | 12 | ATGGATGGATGG |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.230 C 0.270 G 0.270 T 0.230
Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
---|---|---|---|---|---|---|---|---|
VGAGCGCCGAGC | MEME-9 | chr22 | - | 35257401 | 35257412 | 9.37e-08 | 0.0183 | AGAGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr2 | - | 55617725 | 55617736 | 9.37e-08 | 0.0183 | AGAGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 111990076 | 111990087 | 9.37e-08 | 0.0183 | AGAGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 693123 | 693134 | 2.04e-07 | 0.0205 | CGAGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 15432839 | 15432850 | 2.04e-07 | 0.0205 | CGAGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 32817360 | 32817371 | 3.15e-07 | 0.0205 | GGAGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr20 | - | 46031839 | 46031850 | 3.15e-07 | 0.0205 | GGAGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr17 | + | 75855766 | 75855777 | 3.15e-07 | 0.0205 | GGAGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 98834601 | 98834612 | 3.15e-07 | 0.0205 | ggagcgccgagc |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 43059345 | 43059356 | 3.94e-07 | 0.0231 | AGAGCGCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 43368390 | 43368401 | 4.88e-07 | 0.026 | CGAGCGCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 115337760 | 115337771 | 5.82e-07 | 0.0284 | GGAGCGCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | + | 54579937 | 54579948 | 6.61e-07 | 0.0298 | AGAGCGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 693155 | 693166 | 8.34e-07 | 0.0306 | CGAGCGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 15099203 | 15099214 | 8.34e-07 | 0.0306 | CGAGCGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 15432846 | 15432857 | 8.34e-07 | 0.0306 | CGAGCGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr9 | + | 133336231 | 133336242 | 1.01e-06 | 0.0348 | CGAACGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr16 | - | 27203470 | 27203481 | 1.1e-06 | 0.0359 | GGAGCGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 116371396 | 116371407 | 1.29e-06 | 0.0398 | CGAGCACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr21 | - | 31344025 | 31344036 | 1.38e-06 | 0.0406 | AGAGCCCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 35352622 | 35352633 | 1.56e-06 | 0.0415 | GGAGCACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | - | 43059411 | 43059422 | 1.56e-06 | 0.0415 | GGAGCACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 15432832 | 15432843 | 1.76e-06 | 0.0448 | CGAGTGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | - | 39970639 | 39970650 | 1.87e-06 | 0.0448 | GGAGCCCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 22544542 | 22544553 | 2.04e-06 | 0.0448 | AGAGCGCCGAAC |
VGAGCGCCGAGC | MEME-9 | chr9 | + | 131502971 | 131502982 | 2.04e-06 | 0.0448 | GGAGTGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 46247660 | 46247671 | 2.14e-06 | 0.0448 | CGAGCGCCGAAC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 109090718 | 109090729 | 2.14e-06 | 0.0448 | CGAGCGCCGAAC |
VGAGCGCCGAGC | MEME-9 | chr7 | - | 103347870 | 103347881 | 2.67e-06 | 0.0541 | AGAGCACAGAGC |
VGAGCGCCGAGC | MEME-9 | chr15 | - | 101724119 | 101724130 | 2.77e-06 | 0.0541 | AGAGCGCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr2 | - | 44169707 | 44169718 | 3.05e-06 | 0.0551 | GGAGCGCAGAGT |
VGAGCGCCGAGC | MEME-9 | chr17 | - | 7915634 | 7915645 | 3.14e-06 | 0.0551 | AGAGCGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr5 | + | 69167421 | 69167432 | 3.14e-06 | 0.0551 | AGAGCGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr20 | - | 16729946 | 16729957 | 3.3e-06 | 0.0551 | CGAGCACAGAGC |
VGAGCGCCGAGC | MEME-9 | chr10 | + | 75111983 | 75111994 | 3.38e-06 | 0.0551 | agagcccagagc |
VGAGCGCCGAGC | MEME-9 | chr15 | + | 75203044 | 75203055 | 3.38e-06 | 0.0551 | AGAGCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr21 | + | 31343928 | 31343939 | 3.62e-06 | 0.0575 | CGCGCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 46442778 | 46442789 | 4.07e-06 | 0.0592 | CGAGCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr22 | - | 35257451 | 35257462 | 4.07e-06 | 0.0592 | CGAGCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | - | 36128090 | 36128101 | 4.18e-06 | 0.0592 | GGAGCGCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 93079256 | 93079267 | 4.18e-06 | 0.0592 | GGAGCGCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr5 | + | 154039053 | 154039064 | 4.57e-06 | 0.0592 | GGAGCGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr15 | + | 66851423 | 66851434 | 4.66e-06 | 0.0592 | GGAGCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 45216134 | 45216145 | 4.66e-06 | 0.0592 | GGAGCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr10 | - | 86400558 | 86400569 | 4.66e-06 | 0.0592 | GGAGCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chrX | - | 153928513 | 153928524 | 4.66e-06 | 0.0592 | GGAGCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 82358469 | 82358480 | 4.74e-06 | 0.0592 | AGAGCTCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | - | 11093746 | 11093757 | 4.89e-06 | 0.0597 | GGAGTGCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr2 | - | 61017660 | 61017671 | 5.1e-06 | 0.0608 | AGAACACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr10 | + | 75403381 | 75403392 | 5.43e-06 | 0.0608 | GGAACGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr3 | - | 12664152 | 12664163 | 5.43e-06 | 0.0608 | CGAGCACCGAGT |
VGAGCGCCGAGC | MEME-9 | chr5 | - | 154038894 | 154038905 | 5.43e-06 | 0.0608 | GGAACGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr17 | + | 2101671 | 2101682 | 5.59e-06 | 0.0608 | cgaacaccgagc |
VGAGCGCCGAGC | MEME-9 | chr20 | + | 34303151 | 34303162 | 5.59e-06 | 0.0608 | AGAGCCCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr10 | + | 62049334 | 62049345 | 6.46e-06 | 0.0689 | AGAGCGCTGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 15432756 | 15432767 | 6.63e-06 | 0.0695 | CGAGTGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr10 | - | 7818462 | 7818473 | 6.95e-06 | 0.0713 | CGAATGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 151190177 | 151190188 | 7.05e-06 | 0.0713 | CGAGCGTCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 113929601 | 113929612 | 8.05e-06 | 0.0796 | GGAATGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 154220645 | 154220656 | 8.14e-06 | 0.0796 | GGAGCGTCGAGC |
VGAGCGCCGAGC | MEME-9 | chr5 | - | 98773154 | 98773165 | 9.19e-06 | 0.0884 | AGAGCGCCGCGC |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 173398186 | 173398197 | 9.43e-06 | 0.0893 | GGAGCGCAGAGG |
VGAGCGCCGAGC | MEME-9 | chr15 | - | 63121725 | 63121736 | 9.85e-06 | 0.0903 | CGAGCGCCGATC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 171742070 | 171742081 | 9.85e-06 | 0.0903 | CGAGCGCCGATC |
VGAGCGCCGAGC | MEME-9 | chr5 | + | 58583107 | 58583118 | 1.32e-05 | 0.117 | AGAGTGCAGAGT |
VGAGCGCCGAGC | MEME-9 | chr19 | - | 42242909 | 42242920 | 1.32e-05 | 0.117 | AGCGCACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr7 | + | 158856475 | 158856486 | 1.49e-05 | 0.129 | GGCACGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr10 | + | 102421164 | 102421175 | 1.51e-05 | 0.129 | AGAGCCCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr14 | - | 24141967 | 24141978 | 1.53e-05 | 0.129 | AGAGTACAGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | + | 89526074 | 89526085 | 1.54e-05 | 0.129 | CGAGCCCCGAGA |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 32972227 | 32972238 | 1.57e-05 | 0.13 | CGAGCACCGAGG |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 190513768 | 190513779 | 1.6e-05 | 0.131 | AGCGTGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 44986674 | 44986685 | 1.84e-05 | 0.144 | AGACCGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr10 | + | 62049203 | 62049214 | 1.84e-05 | 0.144 | AGAGAGCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr14 | + | 74572379 | 74572390 | 1.84e-05 | 0.144 | GGAGTGCCGAGA |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 235505020 | 235505031 | 1.92e-05 | 0.148 | AGAGCACAGAAC |
VGAGCGCCGAGC | MEME-9 | chr16 | + | 2205490 | 2205501 | 1.97e-05 | 0.148 | GGAGTGCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 37218056 | 37218067 | 1.97e-05 | 0.148 | GGAGTGCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr17 | + | 68512086 | 68512097 | 2e-05 | 0.148 | AGAGCGAAGAGC |
VGAGCGCCGAGC | MEME-9 | chr11 | + | 46594105 | 46594116 | 2.04e-05 | 0.148 | CGAGCGCCGAAA |
VGAGCGCCGAGC | MEME-9 | chr15 | - | 75452328 | 75452339 | 2.05e-05 | 0.148 | GGAACTCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 150010297 | 150010308 | 2.08e-05 | 0.149 | GGAGTGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 56104295 | 56104306 | 2.25e-05 | 0.159 | AGAACGCTGAGC |
VGAGCGCCGAGC | MEME-9 | chr9 | + | 128657091 | 128657102 | 2.28e-05 | 0.159 | GGAGCGCAGATC |
VGAGCGCCGAGC | MEME-9 | chr17 | - | 17300898 | 17300909 | 2.31e-05 | 0.16 | AGAGCACAGAGA |
VGAGCGCCGAGC | MEME-9 | chr17 | + | 48908255 | 48908266 | 2.38e-05 | 0.16 | CGAGCCCAGAAC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 234612506 | 234612517 | 2.38e-05 | 0.16 | CGAGCCCAGAAC |
VGAGCGCCGAGC | MEME-9 | chr3 | - | 15099137 | 15099148 | 2.42e-05 | 0.16 | CGAGTTCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 104859761 | 104859772 | 2.46e-05 | 0.16 | AGAGCACTGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 28648644 | 28648655 | 2.51e-05 | 0.16 | CGCACGCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 173397806 | 173397817 | 2.56e-05 | 0.16 | AGCGCGCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 141876064 | 141876075 | 2.59e-05 | 0.16 | AGAGCCCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 141876096 | 141876107 | 2.59e-05 | 0.16 | AGAGCCCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 141876128 | 141876139 | 2.59e-05 | 0.16 | AGAGCCCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 141876160 | 141876171 | 2.59e-05 | 0.16 | AGAGCCCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 39341913 | 39341924 | 2.71e-05 | 0.165 | AGAAAGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | + | 110502233 | 110502244 | 2.73e-05 | 0.165 | AGAGTGCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 161621615 | 161621626 | 2.92e-05 | 0.169 | AGAGTGCTGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 56080071 | 56080082 | 2.96e-05 | 0.169 | GGAACGCAGAGG |
VGAGCGCCGAGC | MEME-9 | chr12 | + | 48815604 | 48815615 | 3.01e-05 | 0.169 | AGCGTGCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 121872740 | 121872751 | 3.01e-05 | 0.169 | AGAGCTCAGAGT |
VGAGCGCCGAGC | MEME-9 | chr16 | + | 589320 | 589331 | 3.05e-05 | 0.169 | CGAGCGCCGATT |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 91404824 | 91404835 | 3.05e-05 | 0.169 | CGAGCGCCGATT |
VGAGCGCCGAGC | MEME-9 | chrX | + | 153928575 | 153928586 | 3.05e-05 | 0.169 | AGAGAACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 93079188 | 93079199 | 3.06e-05 | 0.169 | CGAGCGCGGAGG |
VGAGCGCCGAGC | MEME-9 | chr17 | - | 49497585 | 49497596 | 3.09e-05 | 0.169 | CGCGCGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 43368333 | 43368344 | 3.15e-05 | 0.169 | CGAGCCCTGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | + | 55830210 | 55830221 | 3.17e-05 | 0.169 | CGATCACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr17 | - | 2101440 | 2101451 | 3.17e-05 | 0.169 | AGAGTGCAGAGG |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 104859695 | 104859706 | 3.22e-05 | 0.169 | CGCGCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr15 | + | 30903872 | 30903883 | 3.25e-05 | 0.169 | GGCGCGCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr9 | - | 36258449 | 36258460 | 3.25e-05 | 0.169 | CGAGCGACGAGT |
VGAGCGCCGAGC | MEME-9 | chr5 | - | 41904408 | 41904419 | 3.27e-05 | 0.169 | AGATCCCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 27605857 | 27605868 | 3.32e-05 | 0.169 | GGAGCTCCGAAC |
VGAGCGCCGAGC | MEME-9 | chr5 | + | 139274141 | 139274152 | 3.32e-05 | 0.169 | GGAGCTCCGAAC |
VGAGCGCCGAGC | MEME-9 | chr16 | - | 2205702 | 2205713 | 3.41e-05 | 0.171 | GGAAAGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 45216163 | 45216174 | 3.41e-05 | 0.171 | GGAAAGCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | - | 104859642 | 104859653 | 3.47e-05 | 0.173 | GGCGCGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr10 | - | 51074738 | 51074749 | 3.56e-05 | 0.174 | GGATCACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 148264870 | 148264881 | 3.56e-05 | 0.174 | GGATCACCGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 29606251 | 29606262 | 3.69e-05 | 0.179 | CGAGCTCCGAGA |
VGAGCGCCGAGC | MEME-9 | chr17 | + | 62757529 | 62757540 | 3.81e-05 | 0.183 | GGAGCCCAGAGG |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 27505704 | 27505715 | 3.92e-05 | 0.187 | AGAATGCAGAGT |
VGAGCGCCGAGC | MEME-9 | chr19 | - | 43798998 | 43799009 | 4e-05 | 0.188 | CGAGCCCCGATC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 22342162 | 22342173 | 4.01e-05 | 0.188 | CGCGCTCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr9 | + | 36258501 | 36258512 | 4.11e-05 | 0.191 | GGAGTGCCGAAT |
VGAGCGCCGAGC | MEME-9 | chr16 | - | 2205432 | 2205443 | 4.34e-05 | 0.201 | CGAGCGTAGAGT |
VGAGCGCCGAGC | MEME-9 | chr7 | + | 103347798 | 103347809 | 4.38e-05 | 0.201 | GGAGCTCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr21 | - | 29002853 | 29002864 | 4.41e-05 | 0.201 | AGAGTGCGGAGT |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 141876019 | 141876030 | 4.47e-05 | 0.202 | GGAGCCCCGCGC |
VGAGCGCCGAGC | MEME-9 | chr2 | + | 32039869 | 32039880 | 4.54e-05 | 0.203 | GGCGCGCAGAAC |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 158110267 | 158110278 | 4.59e-05 | 0.204 | GGAGCTCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr16 | + | 29816319 | 29816330 | 4.62e-05 | 0.204 | GGAGTACCGAAC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 148265144 | 148265155 | 4.79e-05 | 0.21 | agagtccagagt |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 43901451 | 43901462 | 4.97e-05 | 0.216 | AGAGCCTAGAGC |
VGAGCGCCGAGC | MEME-9 | chr17 | - | 3965610 | 3965621 | 5.11e-05 | 0.22 | AGAGCACAGAAT |
VGAGCGCCGAGC | MEME-9 | chr16 | - | 21820549 | 21820560 | 5.44e-05 | 0.231 | AGAACGAAGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 27914868 | 27914879 | 5.44e-05 | 0.231 | AGCACGCCGAAC |
VGAGCGCCGAGC | MEME-9 | chr5 | + | 58583121 | 58583132 | 5.52e-05 | 0.231 | GGAGCGTGGAGC |
VGAGCGCCGAGC | MEME-9 | chr15 | + | 66851451 | 66851462 | 5.52e-05 | 0.231 | GGAGCGTGGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 38374437 | 38374448 | 5.58e-05 | 0.232 | AGCGTCCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr3 | - | 158110018 | 158110029 | 5.67e-05 | 0.234 | GGAATGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 219928188 | 219928199 | 5.71e-05 | 0.234 | GGCGCGCTGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | - | 30908243 | 30908254 | 5.74e-05 | 0.234 | AGAGCCCAGAAT |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 155308888 | 155308899 | 5.88e-05 | 0.236 | CGATCGCGGAGC |
VGAGCGCCGAGC | MEME-9 | chr19 | - | 39402766 | 39402777 | 5.88e-05 | 0.236 | GGAGAGCAGAGT |
VGAGCGCCGAGC | MEME-9 | chr17 | - | 3965157 | 3965168 | 6.01e-05 | 0.24 | GGAGCGCTGAGG |
VGAGCGCCGAGC | MEME-9 | chr16 | + | 589149 | 589160 | 6.15e-05 | 0.242 | CGCGTCCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | - | 8435770 | 8435781 | 6.15e-05 | 0.242 | AGAGCGCCGATG |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 46179668 | 46179679 | 6.35e-05 | 0.247 | GGATCACAGAGC |
VGAGCGCCGAGC | MEME-9 | chr17 | - | 32483665 | 32483676 | 6.35e-05 | 0.247 | GGATCACAGAGC |
VGAGCGCCGAGC | MEME-9 | chr17 | - | 2030117 | 2030128 | 6.54e-05 | 0.253 | AGAACGCGGAGA |
VGAGCGCCGAGC | MEME-9 | chr5 | - | 69167145 | 69167156 | 6.6e-05 | 0.253 | AGCACGCCGAGA |
VGAGCGCCGAGC | MEME-9 | chr19 | - | 42176472 | 42176483 | 6.66e-05 | 0.254 | CGAGAGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr15 | + | 101723931 | 101723942 | 6.73e-05 | 0.255 | GGACCACCGAgc |
VGAGCGCCGAGC | MEME-9 | chr16 | + | 28292060 | 28292071 | 6.82e-05 | 0.255 | CGAATGCAGAAC |
VGAGCGCCGAGC | MEME-9 | chr15 | + | 75452558 | 75452569 | 6.82e-05 | 0.255 | AGAGTACAGAAC |
VGAGCGCCGAGC | MEME-9 | chr15 | + | 67254352 | 67254363 | 6.96e-05 | 0.258 | GGAACGCCGAAG |
VGAGCGCCGAGC | MEME-9 | chr19 | - | 44212792 | 44212803 | 7.12e-05 | 0.259 | GGAGCGCGGATC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 32394792 | 32394803 | 7.17e-05 | 0.259 | GGATCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr14 | + | 88385513 | 88385524 | 7.17e-05 | 0.259 | GGATCCCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr10 | - | 32980725 | 32980736 | 7.17e-05 | 0.259 | AGAACCCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 35717043 | 35717054 | 7.24e-05 | 0.259 | AGAAAGCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 36464460 | 36464471 | 7.24e-05 | 0.259 | GGAGCTCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr10 | + | 75403410 | 75403421 | 7.33e-05 | 0.259 | GGAGAGCCgagg |
VGAGCGCCGAGC | MEME-9 | chr6 | - | 11094024 | 11094035 | 7.33e-05 | 0.259 | GGAGAGCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr12 | + | 2004482 | 2004493 | 7.46e-05 | 0.259 | AGATCGCAGAAC |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 182789365 | 182789376 | 7.46e-05 | 0.259 | GGATTGCAGAGC |
VGAGCGCCGAGC | MEME-9 | chr6 | - | 139027853 | 139027864 | 7.46e-05 | 0.259 | AGAATGCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr16 | - | 2205626 | 2205637 | 7.62e-05 | 0.261 | GGACCCCCGAGC |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 111990173 | 111990184 | 7.66e-05 | 0.261 | CGCGCGCGGAGT |
VGAGCGCCGAGC | MEME-9 | chr6 | + | 116371252 | 116371263 | 7.7e-05 | 0.261 | GGAGCGCCGCGG |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 173397738 | 173397749 | 7.7e-05 | 0.261 | GGAGCGCCGCGG |
VGAGCGCCGAGC | MEME-9 | chr5 | + | 177367178 | 177367189 | 8.14e-05 | 0.274 | GGAGCTCAGAGG |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 45991953 | 45991964 | 8.23e-05 | 0.275 | AGAGCGCAGCAC |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 35717286 | 35717297 | 8.32e-05 | 0.275 | GGCGCGCGGAGT |
VGAGCGCCGAGC | MEME-9 | chr19 | + | 36773259 | 36773270 | 8.35e-05 | 0.275 | AGAATGCAGAGG |
VGAGCGCCGAGC | MEME-9 | chr7 | - | 100081900 | 100081911 | 8.35e-05 | 0.275 | AGATCCCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr3 | - | 196192666 | 196192677 | 8.57e-05 | 0.281 | GGAACACAGAGG |
VGAGCGCCGAGC | MEME-9 | chr19 | - | 35740706 | 35740717 | 8.74e-05 | 0.285 | CGAGCCCGGAGA |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 22544514 | 22544525 | 8.8e-05 | 0.285 | CGCGCCCCGAGA |
VGAGCGCCGAGC | MEME-9 | chr6 | - | 139375629 | 139375640 | 9e-05 | 0.289 | AGAGCCCGGAGG |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 197749326 | 197749337 | 9.26e-05 | 0.289 | AGAGTGCCGATT |
VGAGCGCCGAGC | MEME-9 | chr3 | - | 14651619 | 14651630 | 9.28e-05 | 0.289 | AGAGTGCGGAGG |
VGAGCGCCGAGC | MEME-9 | chr17 | + | 68512274 | 68512285 | 9.32e-05 | 0.289 | CGACCGCAGAGT |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 32817424 | 32817435 | 9.39e-05 | 0.289 | AGAGAGTCGAGC |
VGAGCGCCGAGC | MEME-9 | chr10 | + | 102117977 | 102117988 | 9.5e-05 | 0.289 | GGAGCCCGGAGA |
VGAGCGCCGAGC | MEME-9 | chr1 | + | 240612134 | 240612145 | 9.5e-05 | 0.289 | GGAGCCCGGAGA |
VGAGCGCCGAGC | MEME-9 | chr12 | - | 45216096 | 45216107 | 9.5e-05 | 0.289 | GGAGCCCGGAGA |
VGAGCGCCGAGC | MEME-9 | chr3 | - | 196432633 | 196432644 | 9.5e-05 | 0.289 | GGAGCCCGGAGA |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 201114240 | 201114251 | 9.5e-05 | 0.289 | GGAACCCAGAGG |
VGAGCGCCGAGC | MEME-9 | chr12 | + | 6764736 | 6764747 | 9.56e-05 | 0.289 | GGAGTACAGAGA |
VGAGCGCCGAGC | MEME-9 | chrX | + | 41333878 | 41333889 | 9.56e-05 | 0.289 | AGAACTCCGAGG |
VGAGCGCCGAGC | MEME-9 | chr3 | + | 53347973 | 53347984 | 9.56e-05 | 0.289 | AGAGCACAGAAA |
VGAGCGCCGAGC | MEME-9 | chr15 | + | 69074306 | 69074317 | 9.77e-05 | 0.294 | CGAGTCCAGAGA |
VGAGCGCCGAGC | MEME-9 | chr16 | + | 14975971 | 14975982 | 9.85e-05 | 0.295 | GGATCCCCGAGT |
VGAGCGCCGAGC | MEME-9 | chr1 | - | 93079178 | 93079189 | 9.96e-05 | 0.297 | GGAACACCGCGC |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_3 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif VGAGCGCCGAGC /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Settings:
output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_3 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out/meme.xml | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa |
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB17.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background | alphabet = DNA | max stored scores = 100000 |
allow clobber = true | compute q-values = true | parse genomic coord. = true |
text only = false | scan both strands = true | max strand = false |
threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.