# DREME 4.12.0
#     command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB11.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB11.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB11.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled
#   positives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB11.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-centered (Mon Dec 18 15:52:11 PST 2017)
#   negatives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB11.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/seqs-shuffled (Mon Dec 18 15:52:12 PST 2017)
#        host: wotan
#        when: Mon Dec 18 16:19:40 PST 2017

MEME version 4.12.0

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.187 C 0.308 G 0.318 T 0.186


MOTIF CGGAAVY DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST     CGGAAVY    RBTTCCG        388         71   1.5e-084   4.5e-080
#          CGGAAGT    ACTTCCG        159         10   1.2e-040   3.8e-036
#          CGGAACC    GGTTCCG        117         18   3.0e-021   9.1e-017
#          CGGAAGC    GCTTCCG         91         11   2.2e-018   6.8e-014
#          CGGAAAC    GTTTCCG         71         18   1.9e-009   5.7e-005
#          CGGAACT    AGTTCCG         62         15   1.1e-008   3.5e-004
#          CGGAAAT    ATTTCCG         28          3   1.8e-006   5.5e-002

letter-probability matrix: alength= 4 w= 7 nsites= 558 E= 4.5e-080
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.170251 0.335125 0.494624 0.000000
0.000000 0.512545 0.000000 0.487455


MOTIF CMGGAA DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST      CMGGAA     TTCCKG        193         71   5.7e-018   1.7e-013
#           CCGGAA     TTCCGG        114         35   1.5e-012   4.4e-008
#           CAGGAA     TTCCTG         96         37   3.1e-008   9.2e-004

letter-probability matrix: alength= 4 w= 6 nsites= 240 E= 1.7e-013
0.000000 1.000000 0.000000 0.000000
0.445833 0.554167 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF ACACH DREME-3

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST       ACACH      DGTGT        252        153   9.6e-010   2.8e-005
#            ACACA      TGTGT         98         52   3.9e-005   1.1e+000
#            ACACT      AGTGT         87         53   1.4e-003   4.2e+001
#            ACACC      GGTGT        120         86   5.7e-003   1.7e+002

letter-probability matrix: alength= 4 w= 5 nsites= 310 E= 2.8e-005
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.283871 0.425806 0.000000 0.290323


# Stopping reason: E-value threshold exceeded
#    Running time: 49.71 seconds