# DREME 4.12.0
#     command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB10.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB10.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB10.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled
#   positives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB10.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered (Thu May 10 16:12:54 PDT 2018)
#   negatives: 600 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB10.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled (Thu May 10 16:12:54 PDT 2018)
#        host: surya
#        when: Thu May 10 17:01:42 PDT 2018

MEME version 4.12.0

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.172 C 0.325 G 0.324 T 0.179


MOTIF GGGGTNC DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST     GGGGTNC    GNACCCC        210         87   7.6e-017   2.2e-012
#          GGGGTGC    GCACCCC         99         34   1.0e-009   2.9e-005
#          GGGGTTC    GAACCCC         52         18   1.8e-005   5.0e-001
#          GGGGTAC    GTACCCC         34         11   3.3e-004   9.4e+000
#          GGGGTCC    GGACCCC         55         32   7.0e-003   2.0e+002

letter-probability matrix: alength= 4 w= 7 nsites= 296 E= 2.2e-012
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.141892 0.202703 0.445946 0.209459
0.000000 1.000000 0.000000 0.000000


MOTIF GGGGCGCK DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    GGGGCGCK   MGCGCCCC         57         15   1.5e-007   4.2e-003
#         GGGGCGCG   CGCGCCCC         33          9   1.1e-004   3.0e+000
#         GGGGCGCT   AGCGCCCC         25          6   3.8e-004   1.1e+001

letter-probability matrix: alength= 4 w= 8 nsites= 59 E= 4.2e-003
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 0.559322 0.440678


MOTIF TGACGTCA DREME-3

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    TGACGTCA   TGACGTCA         19          0   1.7e-006   4.6e-002
#         TGACGTCA   TGACGTCA         19          0   1.7e-006   4.6e-002

letter-probability matrix: alength= 4 w= 8 nsites= 20 E= 4.6e-002
0.000000 0.000000 0.000000 1.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


# Stopping reason: E-value threshold exceeded
#    Running time: 24.52 seconds