# DREME 4.12.0
#     command: dreme -v 1 -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/dreme_out -png -dna -p /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -n /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled
#   positives: 599 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered (Thu May 10 16:13:01 PDT 2018)
#   negatives: 599 from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/ZBTB1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-shuffled (Thu May 10 16:13:02 PDT 2018)
#        host: wotan
#        when: Thu May 10 17:52:20 PDT 2018

MEME version 4.12.0

ALPHABET "DNA" DNA-LIKE
A "Adenine" CC0000 ~ T "Thymine" 008000
C "Cytosine" 0000CC ~ G "Guanine" FFB300
N "Any base" = ACGT
X = ACGT
. = ACGT
V "Not T" = ACG
H "Not G" = ACT
D "Not C" = AGT
B "Not A" = CGT
M "Amino" = AC
R "Purine" = AG
W "Weak" = AT
S "Strong" = CG
Y "Pyrimidine" = CT
K "Keto" = GT
U = T
END ALPHABET

strands: + -

Background letter frequencies (from dataset):
A 0.239 C 0.264 G 0.272 T 0.225


MOTIF CMCGCA DREME-1

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST      CMCGCA     TGCGKG        178         75   1.4e-013   4.6e-009
#           CCCGCA     TGCGGG        116         44   4.7e-010   1.5e-005
#           CACGCA     TGCGTG         83         34   1.1e-006   3.6e-002

letter-probability matrix: alength= 4 w= 6 nsites= 261 E= 4.6e-009
0.000000 1.000000 0.000000 0.000000
0.452107 0.547893 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 1.000000 0.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF MTGACTCA DREME-2

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    MTGACTCA   TGAGTCAK         32          0   1.5e-010   4.9e-006
#         ATGACTCA   TGAGTCAT         23          0   9.6e-008   3.1e-003
#         CTGACTCA   TGAGTCAG          9          0   1.9e-003   6.1e+001

letter-probability matrix: alength= 4 w= 8 nsites= 36 E= 4.9e-006
0.666667 0.333333 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF TAAATAAA DREME-3

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    TAAATAAA   TTTATTTA         49          6   4.1e-010   1.3e-005
#         TAAATAAA   TTTATTTA         49          6   4.1e-010   1.3e-005

letter-probability matrix: alength= 4 w= 8 nsites= 212 E= 1.3e-005
0.000000 0.000000 0.000000 1.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 0.000000 0.000000 1.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


MOTIF TGACRTCA DREME-4

#             Word    RC Word        Pos        Neg    P-value    E-value
# BEST    TGACRTCA   TGAYGTCA         26          2   1.2e-006   3.8e-002
#         TGACGTCA   TGACGTCA         11          0   4.7e-004   1.5e+001
#         TGACATCA   TGATGTCA         15          2   1.1e-003   3.5e+001

letter-probability matrix: alength= 4 w= 8 nsites= 35 E= 3.8e-002
0.000000 0.000000 0.000000 1.000000
0.000000 0.000000 1.000000 0.000000
1.000000 0.000000 0.000000 0.000000
0.000000 1.000000 0.000000 0.000000
0.685714 0.000000 0.314286 0.000000
0.000000 0.000000 0.000000 1.000000
0.000000 1.000000 0.000000 0.000000
1.000000 0.000000 0.000000 0.000000


# Stopping reason: E-value threshold exceeded
#    Running time: 67.81 seconds