| Database and Motifs | High-scoring Motif Occurences | Debugging Information |
FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)
For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net
If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble,
"FIMO: Scanning for occurrences of a given motif",
Bioinformatics, 27(7):1017-1018, 2011.
[full text]
DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues
MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)
| MOTIF | WIDTH | BEST POSSIBLE MATCH |
|---|---|---|
| M0085_1.02 | 10 | TTGCCTGAGG |
| M0104_1.02 | 11 | ATATTAATTAA |
| M0105_1.02 | 9 | TTTTAATTG |
| M0108_1.02 | 11 | GATAATATTGA |
| M0177_1.02 | 10 | ACCATATGTT |
| M0178_1.02 | 10 | AACAGCTGTT |
| M0189_1.02 | 8 | GCACGTGA |
| M0195_1.02 | 10 | ACCATATGGT |
| M0196_1.02 | 10 | GGCACGTGTA |
| M0198_1.02 | 10 | AGCCCGTGCG |
| M0199_1.02 | 13 | TAACGACACGTGC |
| M0211_1.02 | 8 | GCACGTGT |
| M0212_1.02 | 10 | GGCACGTGCC |
| M0214_1.02 | 9 | AACATATGT |
| M0216_1.02 | 10 | CGCAGCTGTG |
| M0217_1.02 | 10 | ACCATATGGT |
| M0300_1.02 | 10 | AATGACGTCA |
| M0305_1.02 | 9 | GCCACGTGT |
| M0307_1.02 | 8 | ATACGTTT |
| M0395_1.02 | 8 | GTACTAAT |
| M0396_1.02 | 10 | AACGGTAGCA |
| M0398_1.02 | 11 | AGGAAGTGCAA |
| M0404_1.02 | 10 | AAGGGGGGCA |
| M0405_1.02 | 10 | TGGGCGTGGC |
| M0408_1.02 | 10 | ATGTGCACAT |
| M0413_1.02 | 10 | GTTGCGGGAT |
| M0415_1.02 | 8 | ATAACGGT |
| M0422_1.02 | 10 | CCGGGGGGTC |
| M0424_1.02 | 10 | TTTGACAGCT |
| M0428_1.02 | 8 | AGGAGCAC |
| M0431_1.02 | 9 | ACGGTAGCA |
| M0432_1.02 | 9 | CGCGCGCAC |
| M0433_1.02 | 10 | ATCTAGAACA |
| M0436_1.02 | 10 | TTGTTTATTG |
| M0437_1.02 | 9 | TATATATAT |
| M0442_1.02 | 9 | AATGCAGTG |
| M0443_1.02 | 10 | TGGGCGTGGC |
| M0594_1.02 | 9 | ATTTGAATT |
| M0603_1.02 | 7 | TTAGCGG |
| M0607_1.02 | 9 | TCGTAAATA |
| M0608_1.02 | 10 | GGGGGCGTAA |
| M0609_1.02 | 10 | TCCCGCTGCC |
| M0610_1.02 | 9 | ATCGCGTTA |
| M0629_1.02 | 11 | AATGTATCAAT |
| M0630_1.02 | 10 | AATGTATCAA |
| M0632_1.02 | 10 | AATGTATCAA |
| M0633_1.02 | 10 | TAATGTATTA |
| M0635_1.02 | 13 | AACATGTATAAAA |
| M0714_1.02 | 10 | AACCGGAAGT |
| M0718_1.02 | 10 | ATGTAAACAA |
| M0719_1.02 | 8 | GTAAACAA |
| M0728_1.02 | 12 | AATAAACAAACA |
| M0736_1.02 | 8 | GTAAACAA |
| M0737_1.02 | 10 | TATGTAAACA |
| M0747_1.02 | 10 | AATGTAAACA |
| M0756_1.02 | 9 | GTAAACAAA |
| M0887_1.02 | 9 | CCTAATGAG |
| M0890_1.02 | 8 | GTAATCAA |
| M0891_1.02 | 10 | TTAATTGGTT |
| M0892_1.02 | 10 | CCTAATTACC |
| M0893_1.02 | 10 | ATTAATTAAT |
| M0894_1.02 | 8 | TTAATTAG |
| M0896_1.02 | 8 | TTAATTAG |
| M0897_1.02 | 10 | TTTTATGGGC |
| M0898_1.02 | 8 | TTACGTAA |
| M0900_1.02 | 8 | TTAATTGG |
| M0901_1.02 | 8 | CTTGTCAA |
| M0905_1.02 | 9 | TTAATTACC |
| M0906_1.02 | 10 | AATTAATTAG |
| M0931_1.02 | 9 | TAATTAATT |
| M0937_1.02 | 7 | TGATACC |
| M0942_1.02 | 8 | TTGTAATT |
| M0943_1.02 | 8 | GCTAATTA |
| M0949_1.02 | 7 | TTAATGA |
| M0952_1.02 | 8 | TGATACCC |
| M0958_1.02 | 7 | CTAATTA |
| M0961_1.02 | 9 | CTAATTGGT |
| M0969_1.02 | 9 | CTAATCAGC |
| M0975_1.02 | 9 | TAATTAATT |
| M0994_1.02 | 9 | ATGATACCC |
| M0996_1.02 | 7 | GAAATCA |
| M0999_1.02 | 9 | ATTAATTAC |
| M1007_1.02 | 9 | TTTATGACC |
| M1012_1.02 | 9 | TTAATGACT |
| M1016_1.02 | 7 | GTGATAC |
| M1018_1.02 | 7 | TAATTAA |
| M1025_1.02 | 8 | GCTAATTA |
| M1027_1.02 | 9 | TTAATTACC |
| M1030_1.02 | 9 | ACCACTTAA |
| M1034_1.02 | 7 | GCAATTA |
| M1039_1.02 | 9 | GCTAATTGG |
| M1049_1.02 | 10 | ATGATACCCC |
| M1070_1.02 | 9 | TTAATGACC |
| M1071_1.02 | 8 | TTAATGAC |
| M1073_1.02 | 9 | TTAATGACC |
| M1110_1.02 | 10 | GGGCAATAGA |
| M1125_1.02 | 10 | GCTAATTGGT |
| M1157_1.02 | 10 | TTTTATGACC |
| M1163_1.02 | 9 | ATTAATTAC |
| M1266_1.02 | 10 | GACCGAAACC |
| M1281_1.02 | 9 | CTTACGCAA |
| M1358_1.02 | 9 | TAACCCTAG |
| M1359_1.02 | 10 | TTTTGCGCCA |
| M1418_1.02 | 8 | TGGTACCA |
| M1432_1.02 | 10 | ATTGACCTCT |
| M1458_1.02 | 10 | ATTGACCTCG |
| M1507_1.02 | 10 | AATTTTGGCT |
| M1528_1.02 | 10 | CCATGGCAAC |
| M1529_1.02 | 10 | CCATAGCAAC |
| M1545_1.02 | 9 | CGTACGTCA |
| M1581_1.02 | 10 | TTTGCTGACT |
| M1582_1.02 | 11 | ATATATAATAA |
| M1583_1.02 | 8 | TTCATTGA |
| M1589_1.02 | 10 | GCAGAACAAT |
| M1592_1.02 | 8 | AAAACAAT |
| M1594_1.02 | 10 | CATTGTTTTT |
| M1601_1.02 | 9 | ATTGTTTTC |
| M1605_1.02 | 10 | ATTCATCTTT |
| M1628_1.02 | 11 | AGGTGTGAAGA |
| M1668_1.02 | 12 | TCCAAACGAGAT |
| M1838_1.02 | 15 | CATTGCCTCAGGGCA |
| M1841_1.02 | 15 | GAACATTCTGTTCTT |
| M1863_1.02 | 8 | GTAAACAT |
| M1868_1.02 | 14 | ACAGATAAGAATCT |
| M1871_1.02 | 10 | TGGGTGGGGC |
| M1882_1.02 | 21 | AAAGTGAAAGTGAAAGTAAAA |
| M1884_1.02 | 15 | AGCTAAAAATAGCAT |
| M1889_1.02 | 10 | AAGCACATGG |
| M1890_1.02 | 18 | AGAGTGCTGATTGGTCCA |
| M1906_1.02 | 11 | GGGGGCGGGGC |
| M1915_1.02 | 20 | GCAAGGCATTATGGGAAATC |
| M1917_1.02 | 11 | GGTCACGTGGC |
| M1919_1.02 | 12 | CAAGATGGCGGC |
| M1925_1.02 | 11 | TATTGTGCAAT |
| M1926_1.02 | 9 | CAGGTGAGG |
| M1927_1.02 | 8 | GCCACGTG |
| M1928_1.02 | 11 | GGGAATTTCCC |
| M1929_1.02 | 15 | CATGTCTGGGCATGT |
| M1934_1.02 | 20 | AGGTCAGGGTGACCTGGGCC |
| M1950_1.02 | 6 | GTGGAT |
| M1955_1.02 | 11 | TTTCCAGGAAA |
| M1963_1.02 | 14 | GGGGCCGAGGCCTG |
| M1968_1.02 | 11 | TCCCTGGGGAC |
| M1970_1.02 | 6 | TGCCAA |
| M2065_1.02 | 15 | AGGTCAGGGTGACCT |
| M2264_1.02 | 8 | GCCATCTG |
| M2267_1.02 | 11 | TTTTATGGCTT |
| M2268_1.02 | 11 | TATTGCACAAT |
| M2270_1.02 | 11 | TAATTTAATCA |
| M2273_1.02 | 11 | GGGCGGGAAGG |
| M2275_1.02 | 13 | GAACCAGGAAGTG |
| M2277_1.02 | 11 | ACAGGAAGTGG |
| M2278_1.02 | 11 | TGTGACTCATT |
| M2281_1.02 | 11 | TCCAATCCACA |
| M2283_1.02 | 15 | CAAAAGTAAACAAAG |
| M2286_1.02 | 15 | TGGACTTTGGACTCT |
| M2287_1.02 | 13 | GGCCATAAATCAC |
| M2289_1.02 | 13 | AAGATGATGTCAT |
| M2292_1.02 | 11 | GGTGACTCATC |
| M2296_1.02 | 15 | CTGAGTCAGCAATTT |
| M2299_1.02 | 13 | AGGGACAGCTGCA |
| M2301_1.02 | 15 | AAATGGACCAATCAG |
| M2303_1.02 | 15 | TGACCTCTGACCCCT |
| M2305_1.02 | 11 | TGCGCAGGCGC |
| M2306_1.02 | 13 | TTCATTTGCATAT |
| M2307_1.02 | 15 | AGAAAGTGAAAGTGA |
| M2310_1.02 | 15 | CAAACCACAAACCCC |
| M2313_1.02 | 10 | CCATTGTTTT |
| M2314_1.02 | 15 | GGGAGGGGGCGGGGC |
| M2319_1.02 | 14 | TTCCTTTGATCTTT |
| M2321_1.02 | 20 | AGACATGCCCAGACATGCCC |
| M2323_1.02 | 15 | CAGATCTCGCGAGAG |
| M2385_1.02 | 11 | AAGTAAACAAA |
| M2387_1.02 | 10 | GTGGGGTGAT |
| M2388_1.02 | 10 | ATGGGGTGAT |
| M2390_1.02 | 8 | CAGGAAGG |
| M2391_1.02 | 10 | GGGGCGGGGC |
| M2392_1.02 | 19 | GTTGCCATGGCAACCGCGG |
| M4344_1.02 | 8 | GGTTGCTA |
| M4427_1.02 | 21 | GTGGCCACCAGGGGGCGCTGT |
| M4428_1.02 | 14 | AGAACATTCTGTTC |
| M4438_1.02 | 15 | AGGTCATGGTGACCT |
| M4444_1.02 | 14 | AGGGGATTTCCCAG |
| M4451_1.02 | 11 | GGTCACGTGAC |
| M4452_1.02 | 15 | TCTCGATATGACTCA |
| M4453_1.02 | 15 | AAGAGGAAGTGAAAC |
| M4454_1.02 | 15 | AAATCTCGCGAGAAC |
| M4459_1.02 | 20 | GTGCGGGGGCGGGGGGGGGG |
| M4461_1.02 | 21 | GCCTTCTGGGAATTGTAGTTC |
| M4462_1.02 | 11 | CACCGGAAGTG |
| M4463_1.02 | 18 | AATGTGGAAATGAGTCAG |
| M4467_1.02 | 15 | ATGCCAAAAATAGCA |
| M4469_1.02 | 14 | TCCATGGTGCTGAA |
| M4471_1.02 | 15 | GCAGCCAAGCGTGAC |
| M4473_1.02 | 15 | GCCGGCCAATCAGAG |
| M4476_1.02 | 15 | TCACCTGTTGCTAGG |
| M4477_1.02 | 19 | CTATGGCCATATAAGGCAA |
| M4478_1.02 | 20 | CAGGTGATTTCCGGGAAATG |
| M4479_1.02 | 11 | GCAGCAGCTGT |
| M4481_1.02 | 15 | GGTCACGTGGCCCGG |
| M4484_1.02 | 15 | CTGGGAATTGTAGTC |
| M4509_1.02 | 17 | ATTTGCATAACAAAGGA |
| M4511_1.02 | 8 | TGACCTCT |
| M4522_1.02 | 10 | CCGGAAGTGG |
| M4525_1.02 | 15 | AGCCTCAGGGCATGG |
| M4526_1.02 | 15 | GGGGGGTGACTCATC |
| M4527_1.02 | 21 | GGACTACAACTCCCAGCAGGC |
| M4532_1.02 | 10 | CCACGTGCTC |
| M4536_1.02 | 15 | GGGGAGGGCGCGCGG |
| M4537_1.02 | 15 | GGCGGGAAATTTGAA |
| M4543_1.02 | 11 | GGAACCACGTG |
| M4545_1.02 | 15 | AGAAAGTGAAAGTGA |
| M4551_1.02 | 17 | TTCATACTGGAGAGAAA |
| M4553_1.02 | 10 | GGTCACGTGC |
| M4565_1.02 | 14 | CAGGATGAGTCACC |
| M4567_1.02 | 15 | GCAAAGTAAACATAG |
| M4569_1.02 | 18 | GTCCCGGGTTCGAATCCC |
| M4572_1.02 | 15 | TGCTGACTCAGCAAA |
| M4600_1.02 | 11 | GCAGATAAGGA |
| M4604_1.02 | 21 | GGGGAGGAGGGAGGGGAGGAG |
| M4612_1.02 | 15 | CCGCCAGGGGGCGCC |
| M4619_1.02 | 11 | GGGTGACTCAT |
| M4623_1.02 | 15 | CGGTGACTCATCCTT |
| M4629_1.02 | 17 | CATGACTCAGCAATTTT |
| M4635_1.02 | 15 | GAAAATGAAACTGAA |
| M4636_1.02 | 21 | CTGCCCTCATCCAAGATGGCG |
| M4640_1.02 | 15 | GGGCAGGGGTCTCGG |
| M4665_1.02 | 15 | CAGATAAGAATCTGT |
| M4680_1.02 | 8 | GTCACGTG |
| M4681_1.02 | 10 | TGCTGAGTCA |
| M4692_1.02 | 10 | ACTACAACTC |
| M4698_1.02 | 15 | CTGGACTTTGGACTC |
| M4702_1.02 | 8 | TGACCTTT |
| M4708_1.02 | 10 | TATGCAAATA |
| M4840_1.02 | 11 | AAATGAGCAAC |
| M4850_1.02 | 21 | TGTTGTGTCCGTGCCATCTGG |
| M4930_1.02 | 11 | AAATCGTGACT |
| M4971_1.02 | 10 | GTAACAGCTG |
| M5116_1.02 | 9 | ACCACCTGT |
| M5209_1.02 | 11 | GTGGGCGTGGC |
| M5234_1.02 | 10 | GGTCACGTAC |
| M5284_1.02 | 10 | GCTAATTAGC |
| M5287_1.02 | 13 | CTAATTAAATTAA |
| M5291_1.02 | 13 | TTAATTTAATTAA |
| M5292_1.02 | 13 | GGATGATGCAATA |
| M5293_1.02 | 14 | CGATGACGTCATCG |
| M5294_1.02 | 10 | GTTAAACGGT |
| M5300_1.02 | 17 | TAATCGGTATTTAATTG |
| M5302_1.02 | 14 | TGATGACGTCATCA |
| M5303_1.02 | 17 | TGCTTTCTAGGAATTCA |
| M5304_1.02 | 10 | ACCATATGGT |
| M5307_1.02 | 12 | AAACATATGTTT |
| M5308_1.02 | 10 | ACCATATGTT |
| M5310_1.02 | 8 | TTAATTGG |
| M5320_1.02 | 15 | CCCGCATACAACGAA |
| M5321_1.02 | 10 | AACACGTGTT |
| M5322_1.02 | 8 | TTTTTATT |
| M5323_1.02 | 14 | TGATGACGTCATCG |
| M5325_1.02 | 14 | TGATGACGTGGCAT |
| M5335_1.02 | 18 | ATCGATAATTTTATCGAT |
| M5339_1.02 | 10 | GATAATTAGG |
| M5342_1.02 | 8 | GTAATTGG |
| M5343_1.02 | 8 | ATAATTAC |
| M5344_1.02 | 8 | GTAATTGG |
| M5345_1.02 | 10 | GTTAATCCGC |
| M5346_1.02 | 10 | GCTAATCCGT |
| M5348_1.02 | 13 | CTAATCTAATTAA |
| M5349_1.02 | 13 | CTAATTTAATCAA |
| M5363_1.02 | 12 | TTTCCCGCCAAA |
| M5377_1.02 | 12 | AACCCGGAAGTG |
| M5388_1.02 | 10 | GCTAATTAGC |
| M5390_1.02 | 10 | GCTAATTGGG |
| M5394_1.02 | 10 | GTTAATTGGA |
| M5398_1.02 | 10 | ACCGGAAGTG |
| M5414_1.02 | 10 | GTTAATTGGT |
| M5420_1.02 | 10 | ACCGGAAGTA |
| M5421_1.02 | 11 | AACCGGAAATA |
| M5422_1.02 | 10 | ACCGGAAGTG |
| M5425_1.02 | 15 | CCGGAAGCGGAAGTG |
| M5427_1.02 | 10 | GCTAATTACC |
| M5428_1.02 | 10 | GCTAATTACC |
| M5430_1.02 | 10 | AACACCTGTT |
| M5435_1.02 | 14 | TCGCTGTGTCATTC |
| M5445_1.02 | 14 | AGTAAATATTTTTT |
| M5446_1.02 | 7 | GTAAACA |
| M5460_1.02 | 7 | GTAAACA |
| M5471_1.02 | 14 | GTAAACATGTTTAC |
| M5480_1.02 | 10 | GCTAATTAGT |
| M5481_1.02 | 10 | GCTAATTGGT |
| M5487_1.02 | 10 | TATGCGGGTA |
| M5490_1.02 | 16 | GCTTCGTGGGGGGTCT |
| M5491_1.02 | 14 | CTTCGCGGGGGGTC |
| M5493_1.02 | 8 | GTACGTAA |
| M5497_1.02 | 17 | AACCGGTTTAACCGGTT |
| M5500_1.02 | 10 | GCTAATCCCC |
| M5501_1.02 | 10 | CCTAATCCGC |
| M5502_1.02 | 10 | TTTAATTAGG |
| M5503_1.02 | 10 | TTTAATTAGT |
| M5504_1.02 | 12 | TGGCACGTGCCG |
| M5506_1.02 | 12 | TGGCACGTGCCA |
| M5509_1.02 | 10 | GGCACGTGTC |
| M5512_1.02 | 9 | GGTGGGCAT |
| M5517_1.02 | 10 | ACTAGTTAAC |
| M5518_1.02 | 11 | TTTTAATTGCT |
| M5519_1.02 | 11 | TTTTAATTGGT |
| M5520_1.02 | 11 | TGTTAATTGCT |
| M5530_1.02 | 12 | TATAATCGTTTT |
| M5541_1.02 | 10 | GTTAATTACT |
| M5542_1.02 | 10 | GCTAATTAGT |
| M5543_1.02 | 10 | TTTAATTAGT |
| M5544_1.02 | 10 | TTTTTATGGG |
| M5547_1.02 | 11 | GGTCGTAAAAT |
| M5551_1.02 | 9 | TTTTATTAC |
| M5553_1.02 | 10 | CCAATAAAAA |
| M5555_1.02 | 10 | GTCGTAAAAA |
| M5557_1.02 | 9 | GTAATAAAA |
| M5563_1.02 | 10 | GCTAATTAGC |
| M5567_1.02 | 13 | GAACGTTCTAGAA |
| M5568_1.02 | 15 | TTCGAAACGTTCGAA |
| M5571_1.02 | 10 | GACAGGTGTA |
| M5581_1.02 | 12 | CATGTCATGTAA |
| M5582_1.02 | 12 | CATGTCATGTAA |
| M5583_1.02 | 8 | TTAAGTGC |
| M5584_1.02 | 13 | TTAATCTAATTAA |
| M5587_1.02 | 9 | ATGACTCAT |
| M5591_1.02 | 18 | CAAAAAGGGGCGTGGCAT |
| M5592_1.02 | 14 | AAGGGGGCGTGGCC |
| M5593_1.02 | 11 | GGGGGCGTGGC |
| M5594_1.02 | 13 | CTCGACCTAATTA |
| M5602_1.02 | 8 | TTAATTGG |
| M5604_1.02 | 8 | TTAATTAA |
| M5605_1.02 | 8 | TTAATTAA |
| M5616_1.02 | 12 | GCTATAAATAGC |
| M5621_1.02 | 8 | CCTGTCAA |
| M5623_1.02 | 10 | GCTAATTAAC |
| M5624_1.02 | 10 | AGTAATTAAC |
| M5627_1.02 | 10 | CACAGGTGTT |
| M5628_1.02 | 8 | AGGTGTGA |
| M5631_1.02 | 10 | GTTAATTAGA |
| M5632_1.02 | 10 | ATCACGTGAT |
| M5634_1.02 | 10 | ACCACGTGCC |
| M5635_1.02 | 10 | TTTAATTACT |
| M5636_1.02 | 10 | AACAGCTGTT |
| M5637_1.02 | 18 | TAATTGGTTTTTAATTGC |
| M5643_1.02 | 12 | ACCGTTAAACGG |
| M5652_1.02 | 10 | GCCATATGGT |
| M5653_1.02 | 10 | GACATATGTT |
| M5660_1.02 | 15 | TTGGCACGGTGCCAA |
| M5662_1.02 | 15 | TTGGCACAGTGCCAG |
| M5664_1.02 | 15 | TTGGCACCGTGCCAA |
| M5672_1.02 | 10 | GCTAATTAGC |
| M5689_1.02 | 11 | AATTTGCTGAC |
| M5690_1.02 | 10 | AACATATGTT |
| M5691_1.02 | 10 | ACCATATGTT |
| M5693_1.02 | 10 | ACCATATGTT |
| M5697_1.02 | 14 | ATTATTGATTTTTT |
| M5702_1.02 | 17 | TGCAGTCATGCGTGACG |
| M5704_1.02 | 10 | TAATCGATTA |
| M5705_1.02 | 8 | CTAATTAG |
| M5709_1.02 | 10 | TAATCGATTA |
| M5711_1.02 | 17 | TGCAGTCATGCGTGACG |
| M5714_1.02 | 11 | TAATTTAATTA |
| M5715_1.02 | 11 | TAATTTAATTA |
| M5717_1.02 | 9 | CTTAATCCC |
| M5720_1.02 | 9 | CTTAATCCC |
| M5722_1.02 | 12 | TGACACCTGTCA |
| M5729_1.02 | 9 | ATTTGCATA |
| M5735_1.02 | 13 | AAATTAGCATAAT |
| M5738_1.02 | 9 | ATTTGCATA |
| M5740_1.02 | 14 | ATGAATAATTAATG |
| M5743_1.02 | 16 | ATGCATAATTAATGAG |
| M5744_1.02 | 9 | ATTTGCATA |
| M5746_1.02 | 10 | ATAATGAGCT |
| M5750_1.02 | 13 | GGGGGCCTTGAAA |
| M5753_1.02 | 12 | CAAGACGCCTTA |
| M5771_1.02 | 10 | GTTAATTGGC |
| M5772_1.02 | 8 | TTAATTGG |
| M5777_1.02 | 16 | CGTTGCCATGGCAACG |
| M5782_1.02 | 9 | GGATAATCC |
| M5804_1.02 | 15 | GAGCAACAGGTGGTT |
| M5805_1.02 | 13 | ATGCAACAGGTGG |
| M5807_1.02 | 8 | TTAATTGG |
| M5815_1.02 | 12 | ACAATAACATTG |
| M5825_1.02 | 15 | AACACTACCATTGTT |
| M5835_1.02 | 16 | AACAATGTTCATTGTT |
| M5838_1.02 | 16 | AACAATGTGCAGTGTT |
| M5856_1.02 | 12 | AGTGGGCGTGGC |
| M5857_1.02 | 11 | ACCCGGATGTA |
| M5865_1.02 | 14 | AAAAAGAGGAAGTA |
| M5873_1.02 | 10 | AGGTGTGAAA |
| M5875_1.02 | 20 | AGGTGTGAAAAAAGGTGTGA |
| M5880_1.02 | 19 | AGGTGTGAAATTCACACCT |
| M5882_1.02 | 20 | TTTCACACCTAGGTGTGAAA |
| M5883_1.02 | 16 | TCACACCTTCACACCT |
| M5889_1.02 | 16 | GGTGTGAATTCACACC |
| M5896_1.02 | 8 | AGGTGTGA |
| M5903_1.02 | 12 | AAAGATCAAAGG |
| M5932_1.02 | 10 | GTCACGTGAT |
| M5934_1.02 | 12 | TGACAGCTGTCA |
| M5935_1.02 | 12 | TGACAGCTGTCA |
| M5941_1.02 | 13 | CTAATTTAATTAG |
| M5944_1.02 | 8 | CTAATTAC |
| M5945_1.02 | 8 | CTAATTAC |
| M5949_1.02 | 8 | CTAATTAT |
| M5955_1.02 | 11 | TAATGGCGGAC |
| M5958_1.02 | 13 | TATGTCGCGATAG |
| M5959_1.02 | 17 | TTTCGCCTGGCACGTCA |
| M5962_1.02 | 12 | TTCGGTGGTCGC |
| M5965_1.02 | 15 | GCACAGCGGGGGGTC |
| M5967_1.02 | 19 | ATGTTAAATGTAGATTAAG |
| M5970_1.02 | 17 | GTCGTGTTGTGGGAAAG |
| M5971_1.02 | 14 | TCGAGGCTAGACCA |
| M5972_1.02 | 17 | GAGTATTATGGGATGGA |
| M5973_1.02 | 18 | AGGTGTTCTGTTAACACT |
| M5974_1.02 | 12 | GGGTTCGAGGGT |
| M5976_1.02 | 17 | TTCGTGGCATTTTTCTA |
| M5977_1.02 | 10 | GTGGGGGGGG |
| M5979_1.02 | 12 | TGTGGGAAAAGC |
| M5980_1.02 | 10 | AGGTAGGTAC |
| M5981_1.02 | 15 | TTTTCAGTGTGTGCA |
| M5998_1.02 | 12 | GGTGACGTCATT |
| M6037_1.02 | 12 | TTTGTCATGTAG |
| M6111_1.02 | 13 | AGAAAGGGTTAAT |
| M6114_1.02 | 10 | AAAGCAAACA |
| M6115_1.02 | 15 | CATGTCTGGGCATGT |
| M6119_1.02 | 15 | AAAAAGAGGAAGTGG |
| M6123_1.02 | 15 | GGGGTGGGGGAGGGG |
| M6131_1.02 | 21 | CCGGTTCAAACCGGTTCTGGC |
| M6139_1.02 | 9 | GCACGCAAC |
| M6140_1.02 | 18 | ATTGGTTTTATTGGTTAA |
| M6141_1.02 | 12 | TAATTCAATTAT |
| M6144_1.02 | 10 | GCCCCCGGGC |
| M6146_1.02 | 14 | ACGCGCCTCGGGCG |
| M6147_1.02 | 22 | TTTAATTTGATTTCGATTAATT |
| M6149_1.02 | 13 | TGTTAGTATTGTG |
| M6150_1.02 | 12 | GCCTCCCACGCC |
| M6151_1.02 | 8 | TCACGTGC |
| M6152_1.02 | 10 | GTGACGTCAC |
| M6154_1.02 | 12 | TAAGGAAGAAGG |
| M6155_1.02 | 12 | GTGGTGACGTGG |
| M6157_1.02 | 10 | TCATTAATTG |
| M6159_1.02 | 16 | TTCCTAGAAAGCTTTT |
| M6161_1.02 | 20 | ACCGGGTCACGTGCAGAAGG |
| M6162_1.02 | 14 | GGGTCACGTGTCCA |
| M6163_1.02 | 12 | TTTGTTGTTTTC |
| M6164_1.02 | 25 | ACATAGTGACACCTAGGTGTGAAAT |
| M6166_1.02 | 15 | ATTATGTTAAATCAC |
| M6167_1.02 | 8 | ACATAAAT |
| M6171_1.02 | 11 | AATTGTGCAAT |
| M6172_1.02 | 12 | AAGATTGCGCAA |
| M6173_1.02 | 13 | CAGATTGCAAAAT |
| M6174_1.02 | 11 | AGCCAATCAGC |
| M6176_1.02 | 12 | TGACCTTTGACC |
| M6180_1.02 | 9 | GTGACGTCA |
| M6181_1.02 | 11 | CACTGACGTCA |
| M6182_1.02 | 8 | CTAATCCC |
| M6184_1.02 | 14 | AGGGGGATCGATGG |
| M6185_1.02 | 7 | CGTTGGC |
| M6186_1.02 | 11 | TGTTACATAAC |
| M6187_1.02 | 13 | GGGGATTGCATTT |
| M6188_1.02 | 8 | ATAATTAT |
| M6189_1.02 | 10 | GATAATTACA |
| M6191_1.02 | 10 | GGCGCGAAAC |
| M6192_1.02 | 10 | CGCGCGAAAC |
| M6194_1.02 | 10 | CGCGCCAAAC |
| M6196_1.02 | 13 | TAAGGCGCGAAAA |
| M6197_1.02 | 9 | CGTGACGTC |
| M6199_1.02 | 11 | GGCGTGGGCGG |
| M6200_1.02 | 11 | AGAGTGGGTGT |
| M6201_1.02 | 11 | GGCGGCAGGGC |
| M6204_1.02 | 15 | TAGCAGGAAGTGAGT |
| M6205_1.02 | 14 | GGCAAACAGGAAAT |
| M6206_1.02 | 11 | ATAAGGAAGTA |
| M6207_1.02 | 9 | ACCGGAAGT |
| M6208_1.02 | 12 | CCCAGGAAGTGC |
| M6210_1.02 | 13 | TGCCCACGTGGTG |
| M6211_1.02 | 14 | CGGGGATACGAAAT |
| M6212_1.02 | 13 | CCCACGTACGCAC |
| M6213_1.02 | 11 | ACCGGAAATCC |
| M6215_1.02 | 9 | TGACCTTGA |
| M6216_1.02 | 9 | TGACCTTGA |
| M6221_1.02 | 11 | GCGGGAAGTGG |
| M6222_1.02 | 8 | CAGGAAGT |
| M6223_1.02 | 13 | GACAGGAAGTAAC |
| M6224_1.02 | 17 | GCCACAGGAAGTAACAC |
| M6225_1.02 | 16 | AAGATAAGATAAGATA |
| M6226_1.02 | 10 | CAGGAAATAA |
| M6228_1.02 | 10 | CTGACTCATC |
| M6234_1.02 | 13 | GCAAAGCAAACAA |
| M6235_1.02 | 15 | CTTAAGTAAACAATG |
| M6236_1.02 | 15 | TCTGGCAAAACAAAC |
| M6237_1.02 | 9 | AAACAAACA |
| M6238_1.02 | 11 | AAAATAAACAT |
| M6239_1.02 | 11 | AAAAGTAAACA |
| M6240_1.02 | 12 | AACCAATCAGAG |
| M6241_1.02 | 10 | TAAATAAACA |
| M6242_1.02 | 13 | TAAACAAAAACAA |
| M6244_1.02 | 13 | AAAAACAAACAAC |
| M6245_1.02 | 16 | AAAAAGTAAACAAACC |
| M6246_1.02 | 13 | AGGTAAACAAACA |
| M6247_1.02 | 9 | AATAAACAA |
| M6249_1.02 | 9 | AAACAAATT |
| M6250_1.02 | 12 | AAATAAACAATT |
| M6251_1.02 | 12 | TTGTGTTTTTTT |
| M6256_1.02 | 9 | ACAGATAAC |
| M6257_1.02 | 17 | TAAGAGATAACTTAGAT |
| M6258_1.02 | 7 | AAGATAA |
| M6259_1.02 | 14 | CACATGCGGGTATT |
| M6262_1.02 | 11 | TGCAGTGATTT |
| M6263_1.02 | 10 | GCTGTGATTT |
| M6264_1.02 | 11 | CTGGGTGGTCT |
| M6265_1.02 | 11 | GTGGGTGGTCT |
| M6266_1.02 | 11 | TTGGGTGGTCC |
| M6267_1.02 | 10 | GTGGGGGGTA |
| M6268_1.02 | 12 | AATGCCAGACGC |
| M6269_1.02 | 9 | ATTCATTGA |
| M6270_1.02 | 20 | AGGGACGCAGCTGCTCCCCA |
| M6271_1.02 | 13 | GGGCTCGTGGCGG |
| M6272_1.02 | 16 | AGGCCACGTGCCGGAT |
| M6273_1.02 | 17 | GGGGGCACGTGGCATTA |
| M6274_1.02 | 9 | GGGTTGCCC |
| M6275_1.02 | 12 | GCGTACGTGCGG |
| M6276_1.02 | 16 | GCGCTAGCGGACGTTA |
| M6277_1.02 | 13 | CTGTTACATAATC |
| M6278_1.02 | 12 | TAGGGCTGCAAA |
| M6279_1.02 | 7 | AAAATAC |
| M6280_1.02 | 15 | AATAATCGCGAATAT |
| M6281_1.02 | 15 | GGTTAATTATTAACC |
| M6282_1.02 | 14 | GTTAATCATTAACC |
| M6285_1.02 | 14 | TTTATTGATTTTTT |
| M6287_1.02 | 14 | AGAATGTTCTAGAA |
| M6289_1.02 | 12 | TCATAAATTATC |
| M6290_1.02 | 11 | CCAATAAAACC |
| M6291_1.02 | 10 | CATCCATCAA |
| M6292_1.02 | 10 | CATTAATCAA |
| M6293_1.02 | 15 | TCCAATCTATTGATT |
| M6295_1.02 | 10 | CCATCCATCA |
| M6296_1.02 | 13 | TGCATCAATCATT |
| M6297_1.02 | 10 | CATTAATCAA |
| M6298_1.02 | 11 | GCATTAATCAA |
| M6299_1.02 | 15 | AAAGTAATAAATCAT |
| M6300_1.02 | 14 | GGGCATCAATCAAA |
| M6301_1.02 | 10 | AATTAAAGCA |
| M6302_1.02 | 11 | TCCCTAATAAA |
| M6303_1.02 | 8 | TTAATTGA |
| M6304_1.02 | 10 | TAATTAAATT |
| M6306_1.02 | 12 | TGTCAGGGGGCA |
| M6308_1.02 | 14 | GGAAAGTGAAAGCA |
| M6309_1.02 | 17 | GGAAAGCGAAACTGAAA |
| M6311_1.02 | 20 | TAAAGGAAAGCCAAAAGTGA |
| M6312_1.02 | 10 | GAAAGTGAAA |
| M6313_1.02 | 15 | GAGAAAGTGAAACTG |
| M6314_1.02 | 12 | GAAAGCGAAACT |
| M6315_1.02 | 7 | GTTAATG |
| M6316_1.02 | 9 | CCAGGTGCA |
| M6321_1.02 | 17 | GGCGGGGAGGTGGGGGC |
| M6322_1.02 | 11 | CAGGGTGTGGC |
| M6323_1.02 | 15 | TGCCTGGGTGTGGCT |
| M6324_1.02 | 10 | TGGGTGGGGC |
| M6325_1.02 | 8 | GGGGGCGG |
| M6326_1.02 | 9 | CAGGGGGTG |
| M6327_1.02 | 7 | CTTTGAT |
| M6328_1.02 | 13 | CACTTTTAATTAG |
| M6329_1.02 | 13 | AAAATTAATTAAT |
| M6330_1.02 | 21 | GTGCTGACCCCGCAGCCTTCG |
| M6331_1.02 | 9 | TGCTGACGG |
| M6332_1.02 | 8 | TTGCTGAC |
| M6333_1.02 | 7 | CATGACT |
| M6336_1.02 | 17 | GGGGGGGGGAGGGAGGG |
| M6337_1.02 | 11 | GGGGCCGGAGG |
| M6338_1.02 | 17 | TACAACAACCTGTTCTT |
| M6339_1.02 | 7 | CTCCGGG |
| M6342_1.02 | 12 | GCTAAAAATAGC |
| M6343_1.02 | 13 | CATAAAACTGTCA |
| M6344_1.02 | 13 | TGACAGCTGTCAA |
| M6345_1.02 | 10 | ATCACATGAC |
| M6346_1.02 | 19 | CCACGGCGGTGTCACATGC |
| M6347_1.02 | 7 | TAATTGT |
| M6348_1.02 | 17 | AGTGCCGTGTGCAAAAC |
| M6349_1.02 | 10 | TCAACCTGCA |
| M6350_1.02 | 7 | CAGTTGG |
| M6352_1.02 | 8 | CCACGTGG |
| M6353_1.02 | 7 | GCAGCTG |
| M6354_1.02 | 9 | GACAGCTGC |
| M6355_1.02 | 13 | TGACAGCTGCTGC |
| M6356_1.02 | 9 | GGTGGGGAA |
| M6357_1.02 | 8 | TTTAATGG |
| M6358_1.02 | 12 | CGGCAGATGGCC |
| M6359_1.02 | 7 | AATGACT |
| M6360_1.02 | 12 | CATGACTCAGCA |
| M6361_1.02 | 13 | ATGGAAATTTCCA |
| M6363_1.02 | 9 | AATTTTCCA |
| M6364_1.02 | 9 | AGTTTTCCA |
| M6365_1.02 | 10 | AAATTTTCCT |
| M6366_1.02 | 15 | CATGGATTTTTCCAC |
| M6368_1.02 | 14 | ATGCATTACATAAC |
| M6370_1.02 | 11 | GGAATCTCCCT |
| M6373_1.02 | 14 | CAGCCAATCAGCGC |
| M6374_1.02 | 10 | CTCAAGTGCT |
| M6375_1.02 | 12 | AAACCACTTAAA |
| M6376_1.02 | 7 | TCAAGTG |
| M6377_1.02 | 9 | TTCAAGGAC |
| M6378_1.02 | 13 | AATAAGTATATAA |
| M6379_1.02 | 11 | AGTTAAGTGGA |
| M6380_1.02 | 9 | TTAATTGGT |
| M6381_1.02 | 10 | TCTCCCACGC |
| M6382_1.02 | 14 | TTTGACCTACTTTT |
| M6383_1.02 | 19 | CGTTGACCTTTGACCTTTA |
| M6384_1.02 | 14 | AGGTCATTGACCCT |
| M6385_1.02 | 19 | CTGAACTTTTTTGACCTCA |
| M6387_1.02 | 18 | CTGAACTTTCCTGACCCC |
| M6389_1.02 | 13 | CTGACCTCTGGCC |
| M6391_1.02 | 14 | TGACTTTTGACTTT |
| M6392_1.02 | 18 | TCAATTGAACTTTGTCCT |
| M6393_1.02 | 9 | GTGACCTTT |
| M6394_1.02 | 9 | GTGACCTTT |
| M6395_1.02 | 10 | CTGACCTTTG |
| M6396_1.02 | 10 | TGGCCTTGAA |
| M6397_1.02 | 13 | TGACCTTGAACTT |
| M6399_1.02 | 21 | GTCTTGTTATTGATTTTTTTT |
| M6400_1.02 | 8 | CTAATCCT |
| M6401_1.02 | 15 | CTTTAATCCCTTAAC |
| M6402_1.02 | 9 | TGTAACTGT |
| M6406_1.02 | 18 | GTTCAGTCATGCGTGACA |
| M6410_1.02 | 11 | TCAAGCGTGAA |
| M6411_1.02 | 14 | GTCACTGAAGCGGG |
| M6412_1.02 | 15 | CCCATCAATCAAATT |
| M6413_1.02 | 15 | CCATCAATCAATTTA |
| M6415_1.02 | 9 | CTAATTACC |
| M6416_1.02 | 11 | TCTGTGGTTTG |
| M6417_1.02 | 13 | ATATATTCATGAG |
| M6418_1.02 | 10 | TTTAATCCCA |
| M6419_1.02 | 13 | CATCAATCAAGCT |
| M6420_1.02 | 17 | GGGGGCATCAGGAGGGG |
| M6422_1.02 | 10 | CGGGGGGCCC |
| M6423_1.02 | 9 | ATTTGCATA |
| M6425_1.02 | 14 | TTTGCATTACAATG |
| M6426_1.02 | 10 | CATAAATAAT |
| M6427_1.02 | 13 | CAGCTCATTAATA |
| M6429_1.02 | 13 | CATAATTTATGCA |
| M6430_1.02 | 7 | TGACCTT |
| M6432_1.02 | 14 | TGACCTTTGTCCTA |
| M6433_1.02 | 18 | GTGACCTTTGACCTACTT |
| M6436_1.02 | 13 | TACAGACTGTTCT |
| M6438_1.02 | 15 | GAGTAATTAATATAA |
| M6439_1.02 | 7 | TAATCTG |
| M6440_1.02 | 7 | TTAATTG |
| M6441_1.02 | 21 | GGACAGCTGTTCTGTTTCCTG |
| M6442_1.02 | 17 | CCCTGCCCCCCCCTTCC |
| M6443_1.02 | 7 | TGACCTC |
| M6445_1.02 | 11 | GCCCTGACCTC |
| M6446_1.02 | 20 | GTGACCTCTGGGTGACCCCC |
| M6448_1.02 | 12 | GGGGGATTTCCC |
| M6449_1.02 | 12 | TGGGGATTTCCC |
| M6451_1.02 | 12 | GTTGCTAGGGAA |
| M6453_1.02 | 14 | TTACCATGGCAACC |
| M6454_1.02 | 12 | TGACCTAGTTTT |
| M6455_1.02 | 13 | CTGACCTACTTTT |
| M6456_1.02 | 22 | GGGGGGGGGGGTGGTTTGGGGT |
| M6457_1.02 | 10 | TAACCACAAA |
| M6459_1.02 | 14 | AACCACAAAACCCA |
| M6461_1.02 | 10 | TGTGACCTCA |
| M6462_1.02 | 13 | GTGACCTTTGACC |
| M6463_1.02 | 12 | AGCCTGTCTGCC |
| M6464_1.02 | 11 | GTGTCCGTCTG |
| M6465_1.02 | 10 | GTGTCTGGCC |
| M6466_1.02 | 9 | TGTCTGGCC |
| M6468_1.02 | 8 | CCAGGTGG |
| M6469_1.02 | 7 | TCAGGTG |
| M6470_1.02 | 7 | TCTTTGT |
| M6471_1.02 | 8 | CATTGTTC |
| M6472_1.02 | 7 | CATTGTT |
| M6473_1.02 | 18 | CAACAATCTTCATTGTCC |
| M6474_1.02 | 19 | GGAAAAGAACAATGGGTTC |
| M6475_1.02 | 16 | ATTTGCATAACAATGG |
| M6476_1.02 | 12 | GAGAACAAAGCG |
| M6477_1.02 | 8 | TAACAATA |
| M6478_1.02 | 11 | AGAACAATGGG |
| M6482_1.02 | 20 | GGGGGGGGGCGGGGCCGGGG |
| M6483_1.02 | 24 | GGGGCCAGGGGGGGGGCGGGGCCG |
| M6485_1.02 | 12 | AAAAAGAGGAAG |
| M6486_1.02 | 16 | CGGCTGTTACCCTGGG |
| M6490_1.02 | 9 | AAAACAAAA |
| M6491_1.02 | 12 | TTTCCAGGAATT |
| M6492_1.02 | 13 | TTTTCTAGGAATT |
| M6496_1.02 | 13 | TTTCCCAGAAAAG |
| M6497_1.02 | 13 | TTCCCAGGAATTT |
| M6498_1.02 | 9 | TGACCTTGA |
| M6499_1.02 | 9 | CGTGGGAAA |
| M6500_1.02 | 12 | GACCATCTGTTC |
| M6503_1.02 | 25 | GTCGCTTTTCACACCTCTGATGGCA |
| M6504_1.02 | 24 | AGGTAGAGAATTAGGTGATAAAAA |
| M6505_1.02 | 8 | AGGTGTGA |
| M6506_1.02 | 12 | GCGCTTTGTTCT |
| M6507_1.02 | 14 | CACATTCCTGCGCC |
| M6508_1.02 | 15 | GATATTTCTGCTCTA |
| M6509_1.02 | 12 | AAAAATAGCTCT |
| M6510_1.02 | 14 | TGTTTATGTAAATG |
| M6513_1.02 | 11 | GCCAGCTGCGG |
| M6514_1.02 | 16 | GCCTGAACTGGCCAGA |
| M6515_1.02 | 14 | AAATGGCGGGAAAC |
| M6516_1.02 | 11 | GACCATCTGGT |
| M6517_1.02 | 10 | GGTCATGTGG |
| M6518_1.02 | 9 | GGTCACGTG |
| M6519_1.02 | 16 | CAGGTGACACCTGACA |
| M6521_1.02 | 10 | CTGACCTGAA |
| M6523_1.02 | 17 | TGACCTGACCTGACCTC |
| M6525_1.02 | 11 | CGCCAAGGAGC |
| M6527_1.02 | 10 | ACCCAGGTGG |
| M6529_1.02 | 7 | TTTCTGG |
| M6532_1.02 | 7 | TGACCTC |
| M6534_1.02 | 11 | TTAGCTAATTA |
| M6535_1.02 | 13 | GCGGGGGCGGGGG |
| M6536_1.02 | 12 | GACGTGTCATTA |
| M6537_1.02 | 11 | GGGGATTGGCC |
| M6539_1.02 | 22 | CGGAGAGGGGGAGGGGGGGGGC |
| M6540_1.02 | 15 | CAATAGCGGTGGTGG |
| M6542_1.02 | 13 | AGATGATAGAGCC |
| M6544_1.02 | 12 | GGGGATTTCCCA |
| M6545_1.02 | 14 | GGTAGGGAAACCCC |
| M6546_1.02 | 11 | ATTAATAATTA |
| M6547_1.02 | 19 | GAGGGCCCCAGGCCTCGGC |
| M6548_1.02 | 9 | GGGGTGGTC |
| M6549_1.02 | 9 | GGGGTGGTC |
| M6550_1.02 | 9 | TGGGTGGTC |
| M6552_1.02 | 15 | GGGGTGGGGGAGGGG |
| M6553_1.02 | 12 | GAGGGGGGCGGA |
| M6554_1.02 | 14 | TCCAGATGTTTCGG |
| M6555_1.02 | 9 | CGATAATGA |
| M6556_1.02 | 24 | GGGCAACAAATCCCTGCGCCCCGT |
| M6557_1.02 | 12 | GGAAAAAATCGG |
| M6558_1.02 | 15 | GCACCCTTGGGTGCC |
| M6559_1.02 | 16 | CCCACGGTTACTGCCG |
Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.273 C 0.227 G 0.227 T 0.273
| Motif ID | Alt ID | Sequence Name | Strand | Start | End | p-value | q-value | Matched Sequence |
|---|---|---|---|---|---|---|---|---|
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | + | 124720818 | 124720830 | 2.24e-07 | 0.0831 | CGCCATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | + | 54359206 | 54359218 | 2.84e-07 | 0.0831 | AGCCATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | + | 25174087 | 25174099 | 1.09e-06 | 0.117 | GCCCATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | + | 175378685 | 175378697 | 1.13e-06 | 0.117 | GTCCATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 136403317 | 136403329 | 1.2e-06 | 0.117 | GCCTATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr16 | - | 87388669 | 87388681 | 1.81e-06 | 0.117 | GGCTGTAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | + | 37302820 | 37302832 | 2.05e-06 | 0.117 | TGCAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 125485124 | 125485136 | 2.13e-06 | 0.117 | GGCAGTAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr14 | + | 99821939 | 99821951 | 3.3e-06 | 0.117 | ggcagtaaatcaa |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr14 | + | 89279829 | 89279841 | 3.37e-06 | 0.117 | GCCTATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | - | 25998682 | 25998694 | 3.42e-06 | 0.117 | GGCTGTAAATCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | + | 1171834 | 1171846 | 3.62e-06 | 0.117 | GGAAATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | - | 37393146 | 37393158 | 3.79e-06 | 0.117 | GCCCATAAATCTA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 150196200 | 150196212 | 3.79e-06 | 0.117 | GACCATAAATCTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | + | 67792756 | 67792768 | 3.79e-06 | 0.117 | GACCATAAATCTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr13 | + | 112346646 | 112346658 | 3.96e-06 | 0.117 | GGCTATAAATTAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | + | 57042694 | 57042706 | 4e-06 | 0.117 | gccagtaaatcac |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr19 | + | 38862805 | 38862817 | 4.11e-06 | 0.117 | ggctgtaaatcaa |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr14 | - | 100023013 | 100023025 | 4.18e-06 | 0.117 | AGCAGTAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 167163100 | 167163112 | 4.8e-06 | 0.117 | gcacataaatcac |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | - | 123643975 | 123643987 | 5.16e-06 | 0.117 | ACCAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 158405498 | 158405510 | 5.16e-06 | 0.117 | AGCTGTAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | - | 75402633 | 75402645 | 5.31e-06 | 0.117 | TGACATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | + | 54033660 | 54033672 | 5.42e-06 | 0.117 | GGCCATAAATTTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | + | 54359338 | 54359350 | 5.5e-06 | 0.117 | GACCATAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | - | 38890369 | 38890381 | 5.63e-06 | 0.117 | ATCCATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | - | 124429253 | 124429265 | 5.98e-06 | 0.117 | GGTCATAAATCCC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | - | 72098981 | 72098993 | 6.08e-06 | 0.117 | AGCTATAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 99900758 | 99900770 | 6.08e-06 | 0.117 | AGCTATAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 87718593 | 87718605 | 6.08e-06 | 0.117 | AGCTATAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 233113000 | 233113012 | 6.17e-06 | 0.117 | GGCTGTAAATCTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | + | 51607004 | 51607016 | 6.95e-06 | 0.117 | tgtcataaatcag |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr21 | + | 29075976 | 29075988 | 7.3e-06 | 0.117 | GTCAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr21 | - | 37371005 | 37371017 | 7.45e-06 | 0.117 | GGTCATAAATTAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | - | 54052265 | 54052277 | 7.45e-06 | 0.117 | CGTCATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | - | 132700845 | 132700857 | 7.74e-06 | 0.117 | ATCCATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr18 | + | 42850419 | 42850431 | 8.08e-06 | 0.117 | GGACATAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | + | 124720933 | 124720945 | 8.17e-06 | 0.117 | TGCCATAAATTAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | - | 70494272 | 70494284 | 8.35e-06 | 0.117 | AGCAGTAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | - | 12840034 | 12840046 | 8.5e-06 | 0.117 | GGCTGTAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 4321168 | 4321180 | 8.62e-06 | 0.117 | ACCAATAAATCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 184622375 | 184622387 | 8.62e-06 | 0.117 | AGCTGTAAATCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | + | 17379252 | 17379264 | 9.1e-06 | 0.117 | TGTAATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr18 | - | 31207044 | 31207056 | 9.95e-06 | 0.117 | CCCAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 37192090 | 37192102 | 9.95e-06 | 0.117 | CCCAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | - | 72124206 | 72124218 | 1.01e-05 | 0.117 | ACCAGTAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr21 | + | 41783765 | 41783777 | 1.01e-05 | 0.117 | tgtcataaatcaa |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 228861284 | 228861296 | 1.02e-05 | 0.117 | GTCAATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr4 | + | 80307597 | 80307609 | 1.03e-05 | 0.117 | AACAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 131816219 | 131816231 | 1.04e-05 | 0.117 | AGTTATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr20 | + | 52974333 | 52974345 | 1.04e-05 | 0.117 | ATCAATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr18 | + | 75212632 | 75212644 | 1.04e-05 | 0.117 | ATCAATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | + | 40092553 | 40092565 | 1.09e-05 | 0.118 | AGCCATAAATAAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr18 | + | 62526306 | 62526318 | 1.15e-05 | 0.118 | GGGAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 22552942 | 22552954 | 1.16e-05 | 0.118 | GGCAGTAAATTAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 75379525 | 75379537 | 1.16e-05 | 0.118 | CACAATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 3404008 | 3404020 | 1.18e-05 | 0.118 | ACACATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 4663089 | 4663101 | 1.18e-05 | 0.118 | ACACATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 94470139 | 94470151 | 1.19e-05 | 0.118 | GGCCTTAAATCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | + | 109611253 | 109611265 | 1.23e-05 | 0.12 | TGCAATAAATCCC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 125410072 | 125410084 | 1.31e-05 | 0.121 | TGCTGTAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | + | 124662460 | 124662472 | 1.34e-05 | 0.121 | GCCAATCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr19 | - | 38544152 | 38544164 | 1.35e-05 | 0.121 | AGCAATCAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr4 | - | 173252568 | 173252580 | 1.36e-05 | 0.121 | GCCAATAAATTAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chrX | - | 24146321 | 24146333 | 1.38e-05 | 0.121 | AGCAATAAATTAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 233241923 | 233241935 | 1.38e-05 | 0.121 | GGCAATAAATAAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | + | 90548242 | 90548254 | 1.42e-05 | 0.121 | AGTAATAAATCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 229230416 | 229230428 | 1.43e-05 | 0.121 | TTCCATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 47690734 | 47690746 | 1.43e-05 | 0.121 | AGTCATAAATCCC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr22 | + | 35478133 | 35478145 | 1.48e-05 | 0.124 | GCAAATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr11 | + | 11463598 | 11463610 | 1.53e-05 | 0.125 | AGTCGTAAATCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr13 | + | 79918719 | 79918731 | 1.53e-05 | 0.125 | TGTAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr20 | + | 53162609 | 53162621 | 1.6e-05 | 0.128 | GGCCATCAATCCT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | - | 76114258 | 76114270 | 1.65e-05 | 0.129 | CGCCGTCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 159916282 | 159916294 | 1.65e-05 | 0.129 | AGCTATAAATTAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr13 | - | 112346498 | 112346510 | 1.74e-05 | 0.133 | TGCTATCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | + | 1809479 | 1809491 | 1.75e-05 | 0.133 | GGTCATAAATAAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | + | 67720697 | 67720709 | 1.81e-05 | 0.136 | CGCTATCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr17 | + | 48626516 | 48626528 | 1.86e-05 | 0.136 | CGACATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 41870395 | 41870407 | 1.92e-05 | 0.136 | GACAGTAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 41783389 | 41783401 | 1.93e-05 | 0.136 | GGTTGTAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 121310122 | 121310134 | 1.93e-05 | 0.136 | AGACATAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 2028803 | 2028815 | 1.95e-05 | 0.136 | ACACATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | - | 28118378 | 28118390 | 1.95e-05 | 0.136 | TGCCATAAATAAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | + | 71747704 | 71747716 | 2.06e-05 | 0.142 | agaaataaatcag |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | + | 71496218 | 71496230 | 2.1e-05 | 0.143 | TGTAATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr17 | - | 34981871 | 34981883 | 2.12e-05 | 0.143 | ACTCATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 220119299 | 220119311 | 2.17e-05 | 0.143 | AGCAATAAATCCA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | - | 9141429 | 9141441 | 2.21e-05 | 0.143 | AAACATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr9 | - | 85743441 | 85743453 | 2.21e-05 | 0.143 | AAACATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | - | 77067344 | 77067356 | 2.23e-05 | 0.143 | GGCTGTAAATTAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | - | 80883723 | 80883735 | 2.41e-05 | 0.153 | GGCAGTGAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr16 | - | 2799960 | 2799972 | 2.43e-05 | 0.153 | GGCTACAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 228903075 | 228903087 | 2.53e-05 | 0.158 | GGCAGTAAATTAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr19 | - | 34218406 | 34218418 | 2.65e-05 | 0.161 | AGACATAAATCTA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | + | 194135100 | 194135112 | 2.68e-05 | 0.161 | GGCAATAAAACAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | + | 1171910 | 1171922 | 2.71e-05 | 0.161 | GTCAATAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 233113145 | 233113157 | 2.73e-05 | 0.161 | AGCTGTAAATCTA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | + | 150196230 | 150196242 | 2.73e-05 | 0.161 | AACAATAAATCTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | + | 149704997 | 149705009 | 2.78e-05 | 0.162 | cctcataaatcag |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | - | 122825073 | 122825085 | 2.81e-05 | 0.162 | AGAAATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr4 | + | 91064647 | 91064659 | 2.88e-05 | 0.162 | tactataaatcag |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 169942644 | 169942656 | 2.89e-05 | 0.162 | TGCAGTAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | + | 171802037 | 171802049 | 2.89e-05 | 0.162 | AGCAATGAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr16 | + | 15591161 | 15591173 | 2.9e-05 | 0.162 | ggcagtaaatcca |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 38783730 | 38783742 | 2.96e-05 | 0.163 | AGCTGTCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | + | 142885508 | 142885520 | 3.01e-05 | 0.164 | TCCCATCAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 54273197 | 54273209 | 3.03e-05 | 0.164 | GAACATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | + | 25334025 | 25334037 | 3.33e-05 | 0.178 | ATCCATAAATTAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 75402592 | 75402604 | 3.35e-05 | 0.178 | CGCAATCAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 124735308 | 124735320 | 3.58e-05 | 0.187 | CGCTGTAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr14 | + | 34700379 | 34700391 | 3.58e-05 | 0.187 | AAACATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 232678790 | 232678802 | 3.63e-05 | 0.187 | GGCCATCAATTAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 34320460 | 34320472 | 3.65e-05 | 0.187 | TATCATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | + | 109611528 | 109611540 | 3.68e-05 | 0.188 | TGCCATAAAACAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | + | 98477111 | 98477123 | 3.77e-05 | 0.19 | GGCTATAATTCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr11 | + | 9566423 | 9566435 | 3.81e-05 | 0.191 | GGCAATTAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 68384790 | 68384802 | 3.89e-05 | 0.191 | GGCAGTGAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | + | 124077492 | 124077504 | 3.89e-05 | 0.191 | GGCAATAAATGAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr9 | + | 81689987 | 81689999 | 3.99e-05 | 0.195 | GGCTGTCAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | + | 61895117 | 61895129 | 4.11e-05 | 0.199 | AGCAGTAAATTAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 244348216 | 244348228 | 4.18e-05 | 0.199 | GGCTATAAAACAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | + | 71279341 | 71279353 | 4.18e-05 | 0.199 | CCCCATCAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | - | 10653110 | 10653122 | 4.22e-05 | 0.199 | GTCAGTAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | + | 1809593 | 1809605 | 4.29e-05 | 0.201 | GGATATAAATTAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 90137773 | 90137785 | 4.33e-05 | 0.201 | TGGAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr11 | - | 32890984 | 32890996 | 4.4e-05 | 0.203 | TCACATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 9803265 | 9803277 | 4.6e-05 | 0.211 | TCCCATAAATCCA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr2 | - | 37376845 | 37376857 | 4.72e-05 | 0.214 | TGTCATAAATTAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | - | 37393457 | 37393469 | 4.81e-05 | 0.217 | CACAATAAATCTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 233241825 | 233241837 | 4.85e-05 | 0.217 | GGCAATAAAACAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 7302671 | 7302683 | 5e-05 | 0.22 | CATCATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 77996293 | 77996305 | 5.05e-05 | 0.22 | GGTCATAAATAAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr19 | + | 47769656 | 47769668 | 5.07e-05 | 0.22 | atccatcaatcat |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr19 | + | 47769709 | 47769721 | 5.07e-05 | 0.22 | atccatcaatcat |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | - | 106075376 | 106075388 | 5.19e-05 | 0.222 | GGCATTAAATCTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 229230486 | 229230498 | 5.19e-05 | 0.222 | AGCTTTAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 175842077 | 175842089 | 5.3e-05 | 0.222 | CCCAATAAATTAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | + | 130425815 | 130425827 | 5.3e-05 | 0.222 | CCCAATAAATTAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 136123564 | 136123576 | 5.33e-05 | 0.222 | AGCCATAAAACTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | + | 124655934 | 124655946 | 5.35e-05 | 0.222 | AGCCAAAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr18 | - | 75212579 | 75212591 | 5.43e-05 | 0.224 | GGCGATCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | - | 37479466 | 37479478 | 5.48e-05 | 0.224 | CCTAATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | + | 99900743 | 99900755 | 5.53e-05 | 0.224 | gctcatgaatcac |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 209885010 | 209885022 | 5.55e-05 | 0.224 | ACCCATTAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 14265023 | 14265035 | 5.58e-05 | 0.224 | GTTAATAAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr17 | - | 57542023 | 57542035 | 5.61e-05 | 0.224 | AGTCATGAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | + | 27165627 | 27165639 | 5.72e-05 | 0.224 | ACGCGTAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr18 | - | 50629300 | 50629312 | 5.78e-05 | 0.224 | GGCTATAAACCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | - | 37479591 | 37479603 | 5.89e-05 | 0.224 | AGTCATAAATAAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | - | 59886036 | 59886048 | 5.92e-05 | 0.224 | CTTCATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr21 | + | 42974719 | 42974731 | 6.02e-05 | 0.224 | ccctatcaatcac |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | + | 149705036 | 149705048 | 6.02e-05 | 0.224 | agctatgaatcaa |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr20 | - | 53610016 | 53610028 | 6.06e-05 | 0.224 | TCTTATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr16 | + | 15591039 | 15591051 | 6.06e-05 | 0.224 | AGCAGTAAATCCA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 77996007 | 77996019 | 6.11e-05 | 0.224 | TTCTATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr5 | - | 99020436 | 99020448 | 6.11e-05 | 0.224 | AGCCATATATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | - | 157933495 | 157933507 | 6.11e-05 | 0.224 | AGCTGTCAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | - | 157933797 | 157933809 | 6.11e-05 | 0.224 | AGCTGTCAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr16 | + | 79600879 | 79600891 | 6.11e-05 | 0.224 | AGCTGTCAATCAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 244348098 | 244348110 | 6.19e-05 | 0.225 | AGCCATAAACCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 39184073 | 39184085 | 6.38e-05 | 0.231 | CAGCATAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 7311461 | 7311473 | 6.48e-05 | 0.231 | GCTAATAAATCTA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | + | 125511992 | 125512004 | 6.48e-05 | 0.231 | TCTCATAAATctg |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | - | 85834539 | 85834551 | 6.53e-05 | 0.232 | GGCAATAAAACTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr9 | - | 18977044 | 18977056 | 6.63e-05 | 0.232 | TGGAATAAATCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr2 | + | 223815192 | 223815204 | 6.63e-05 | 0.232 | TGCCATAAACCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 8626532 | 8626544 | 6.96e-05 | 0.243 | gaccataaaccac |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | + | 71747868 | 71747880 | 7.03e-05 | 0.244 | agccatgaatcct |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr3 | + | 124429211 | 124429223 | 7.15e-05 | 0.246 | GGCCATGAATTAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr17 | - | 68381326 | 68381338 | 7.39e-05 | 0.252 | AGCAATAAATATT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | - | 70526839 | 70526851 | 7.42e-05 | 0.252 | GGGCATAAATAAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | - | 7302624 | 7302636 | 7.48e-05 | 0.253 | TGTAATCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | - | 75379367 | 75379379 | 7.54e-05 | 0.254 | CGAAGTAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | - | 69143963 | 69143975 | 7.64e-05 | 0.255 | GACAATTAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 175841926 | 175841938 | 7.68e-05 | 0.255 | AGTCATAAATAAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr17 | - | 71023720 | 71023732 | 7.72e-05 | 0.255 | CCCCATAAATTTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr8 | + | 37472365 | 37472377 | 7.8e-05 | 0.256 | TGCTGTAAATTAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr19 | - | 28864185 | 28864197 | 7.9e-05 | 0.256 | AGCAGTGAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | - | 104060999 | 104061011 | 7.9e-05 | 0.256 | GTCAATGAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 7311566 | 7311578 | 7.9e-05 | 0.256 | AGCAATAAATGAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | + | 8534196 | 8534208 | 7.96e-05 | 0.256 | tctaataAATCTC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 234745886 | 234745898 | 8.03e-05 | 0.257 | GCTTATCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr20 | + | 53899682 | 53899694 | 8.07e-05 | 0.257 | TGCTCTAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr18 | - | 59455288 | 59455300 | 8.11e-05 | 0.257 | GAGTATAAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 37192074 | 37192086 | 8.3e-05 | 0.261 | TCCCATAAATAAG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr19 | - | 2529665 | 2529677 | 8.46e-05 | 0.263 | GTCCATAAATGAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 6404926 | 6404938 | 8.46e-05 | 0.263 | TGCTACAAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | - | 114914506 | 114914518 | 8.54e-05 | 0.263 | GTTTATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr6 | - | 125050893 | 125050905 | 8.58e-05 | 0.263 | TCTCATAAATCTA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr13 | + | 41696552 | 41696564 | 8.58e-05 | 0.263 | TGCTATgaatctc |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr14 | + | 91285126 | 91285138 | 8.86e-05 | 0.27 | AGCAATCAATCCT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr10 | - | 70378328 | 70378340 | 8.91e-05 | 0.27 | GCTCATAAATAAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | - | 105024906 | 105024918 | 9.15e-05 | 0.275 | ACCAATGAATCAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | + | 123644183 | 123644195 | 9.15e-05 | 0.275 | TGCAATAAAACAT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | - | 80403752 | 80403764 | 9.31e-05 | 0.278 | TCGCATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr1 | + | 210236705 | 210236717 | 9.39e-05 | 0.278 | GACAATCAATCTT |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | + | 159146694 | 159146706 | 9.45e-05 | 0.278 | ATCTATCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr7 | + | 159146738 | 159146750 | 9.45e-05 | 0.278 | ATCTATCAATCAC |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr16 | + | 77409623 | 77409635 | 9.61e-05 | 0.281 | ACCCTTAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr19 | - | 40646294 | 40646306 | 9.68e-05 | 0.282 | AGTCATGAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr15 | + | 67792709 | 67792721 | 9.78e-05 | 0.283 | AGTTGTAAATCTG |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr12 | - | 85834665 | 85834677 | 9.82e-05 | 0.283 | TTTCATAAATCAA |
| M2287_1.02 | (HOXC9)_(Mus_musculus)_(DBD_0.98) | chr14 | + | 96979831 | 96979843 | 9.92e-05 | 0.285 | AAGCATAAATCAA |
Command line:
/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_4 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M2287_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Settings:
| output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_4 | MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme | sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa |
| background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/TSHZ1.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background | alphabet = DNA | max stored scores = 100000 |
| allow clobber = true | compute q-values = true | parse genomic coord. = true |
| text only = false | scan both strands = true | max strand = false |
| threshold type = p-value | output theshold = 0.0001 | pseudocount = 0.1 |
| alpha = 1 | verbosity = 1 |
This information can be useful in the event you wish to report a problem with the FIMO software.