# WARNING: this file is not sorted! # db id alt consensus E-value adj_p-value log_adj_p-value bin_location bin_width total_width sites_in_bin total_sites p_success p-value mult_tests 1 RTGAGTCAY MEME-1 RTGAGTCAY 1.1e-024 1.4e-027 -61.82 0.0 216 492 319 453 0.43902 5.8e-030 245 1 SATGACRTCAYY MEME-3 SATGACRTCAYY 3.1e-012 4.2e-015 -33.10 0.0 161 489 219 410 0.32924 1.7e-017 244 2 GTCAYY DREME-1 GTCAYY 2.0e-019 2.6e-022 -49.69 0.0 191 495 293 473 0.38586 1.1e-024 247 2 ATAAA DREME-2 ATAAA 1.3e-004 1.8e-007 -15.52 0.0 134 496 196 494 0.27016 7.3e-010 247 2 AWTTAC DREME-3 AWTTAC 7.8e-003 1.0e-005 -11.46 0.0 101 495 106 318 0.20404 4.3e-008 247 2 TGACTCAB DREME-4 TGACTCAB 5.8e-019 7.9e-022 -48.59 0.0 205 493 146 187 0.41582 3.2e-024 246 2 CTGHCA DREME-5 CTGHCA 1.3e0000 1.7e-003 -6.37 0.0 275 495 293 445 0.55556 6.9e-006 247 3 M0105_1.02 (ARID3C)_(Mus_musculus)_(DBD_0.87) NTTTDATHN 8.2e0000 1.1e-002 -4.50 0.0 34 492 65 559 0.06911 4.6e-005 245 3 M0189_1.02 (ID2)_(Mus_musculus)_(DBD_0.98) RCACGTGR 8.8e-001 1.2e-003 -6.73 0.0 237 493 272 465 0.48073 4.8e-006 246 3 M0300_1.02 (ATF2)_(Mus_musculus)_(DBD_1.00) NRTKACGTMA 3.5e-012 4.8e-015 -32.98 0.0 193 491 327 575 0.39308 1.9e-017 245 3 M0305_1.02 (CREB3L2)_(Mus_musculus)_(DBD_1.00) GCCACGTGD 7.4e0000 1.0e-002 -4.61 0.0 40 492 58 411 0.08130 4.1e-005 245 3 M0424_1.02 (SNAI3)_(Mus_musculus)_(DBD_0.75) NNTGACAKNN 6.0e-014 8.1e-017 -37.06 0.0 177 491 322 596 0.36049 3.3e-019 245 3 M0610_1.02 TET1 NNYRCGYWN 5.7e0000 7.8e-003 -4.86 0.0 258 492 252 404 0.52439 3.2e-005 245 3 M0718_1.02 FOXK1 DNRTMAACAH 3.9e-002 5.3e-005 -9.85 0.0 131 491 209 574 0.26680 2.2e-007 245 3 M0719_1.02 FOXG1 RTAAACAW 5.3e0000 7.1e-003 -4.95 0.0 211 493 274 532 0.42799 2.9e-005 246 3 M0736_1.02 (FOXK2)_(Mus_musculus)_(DBD_0.90) RTAAACAA 2.1e-004 2.8e-007 -15.08 0.0 161 493 258 576 0.32657 1.2e-009 246 3 M0747_1.02 (FOXL2)_(Mus_musculus)_(DBD_0.70) WNNRTAAAYA 1.8e-002 2.4e-005 -10.65 0.0 215 491 315 577 0.43788 9.7e-008 245 3 M0890_1.02 LHX6 NYAATCAN 2.7e-008 3.6e-011 -24.05 0.0 223 493 351 581 0.45233 1.5e-013 246 3 M0892_1.02 EMX1 NYTAATKAVN 4.4e-004 5.9e-007 -14.34 0.0 223 491 327 566 0.45418 2.4e-009 245 3 M0893_1.02 ZFHX2 NNTAATTANN 2.5e-001 3.4e-004 -7.99 0.0 115 491 174 538 0.23422 1.4e-006 245 3 M0894_1.02 LBX1 TTAATTAG 4.7e0000 6.3e-003 -5.07 0.0 157 493 217 540 0.31846 2.6e-005 246 3 M0896_1.02 VENTX TTAATTAG 1.0e-003 1.4e-006 -13.48 0.0 135 493 209 538 0.27383 5.7e-009 246 3 M0897_1.02 HOXB13 DTTWAYDRBN 1.2e-013 1.6e-016 -36.34 0.0 169 491 297 564 0.34420 6.7e-019 245 3 M0900_1.02 SHOX HTAATTRV 5.1e-003 6.9e-006 -11.88 0.0 131 493 209 563 0.26572 2.8e-008 246 3 M0901_1.02 AC226150.2 CWTGTCAA 2.4e0000 3.3e-003 -5.73 0.0 143 493 218 588 0.29006 1.3e-005 246 3 M0905_1.02 (HOXA4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 1.8e-004 2.5e-007 -15.21 0.0 154 492 231 526 0.31301 1.0e-009 245 3 M0931_1.02 (LHX1)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 2.1e-003 2.9e-006 -12.76 0.0 118 492 191 551 0.23984 1.2e-008 245 3 M0943_1.02 (OTP)_(Mus_musculus)_(DBD_1.00) NYTAATTR 8.0e-002 1.1e-004 -9.13 0.0 145 493 208 526 0.29412 4.4e-007 246 3 M0949_1.02 (AC012531.1)_(Mus_musculus)_(DBD_1.00) NTAATDR 1.2e-006 1.7e-009 -20.22 0.0 130 494 192 470 0.26316 6.7e-012 246 3 M0958_1.02 (LHX4)_(Mus_musculus)_(DBD_1.00) BYAATYW 1.9e0000 2.6e-003 -5.96 0.0 228 494 314 570 0.46154 1.0e-005 246 3 M0969_1.02 (LHX8)_(Mus_musculus)_(DBD_1.00) NYAATYANN 1.2e-005 1.6e-008 -17.92 0.0 132 492 228 582 0.26829 6.7e-011 245 3 M0975_1.02 (LHX5)_(Mus_musculus)_(DBD_1.00) TAATTRNNN 6.9e-004 9.3e-007 -13.89 0.0 116 492 192 556 0.23577 3.8e-009 245 3 M0999_1.02 (NKX6-1)_(Mus_musculus)_(DBD_1.00) NWTAATKRN 3.2e-004 4.3e-007 -14.65 0.0 152 492 244 572 0.30894 1.8e-009 245 3 M1007_1.02 (HOXA11)_(Mus_musculus)_(DBD_1.00) TTWAYDDNN 5.5e-010 7.4e-013 -27.93 0.0 182 492 130 201 0.36992 3.0e-015 245 3 M1012_1.02 (HOXB4)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 1.0e-005 1.4e-008 -18.08 0.0 116 492 195 543 0.23577 5.7e-011 245 3 M1025_1.02 (HOXD1)_(Mus_musculus)_(DBD_0.98) NNYVATYA 9.6e-003 1.3e-005 -11.25 0.0 117 493 157 450 0.23732 5.3e-008 246 3 M1027_1.02 (HOXA6)_(Mus_musculus)_(DBD_1.00) WTAATKRBN 1.9e-008 2.5e-011 -24.39 0.0 154 492 257 555 0.31301 1.0e-013 245 3 M1039_1.02 (ENSG00000229544)_(Mus_musculus)_(DBD_1.00) NNTAATDRN 3.7e-006 5.0e-009 -19.11 0.0 144 492 227 530 0.29268 2.0e-011 245 3 M1070_1.02 (HOXC5)_(Mus_musculus)_(DBD_1.00) NTAATKRNN 4.0e-005 5.3e-008 -16.75 0.0 116 492 188 525 0.23577 2.2e-010 245 3 M1071_1.02 (HOXD3)_(Mus_musculus)_(DBD_1.00) NTAATKRN 1.3e-005 1.7e-008 -17.88 0.0 195 493 288 541 0.39554 7.0e-011 246 3 M1073_1.02 (HOXA3)_(Mus_musculus)_(DBD_1.00) HTAATKRNN 2.3e-003 3.1e-006 -12.67 0.0 116 492 193 569 0.23577 1.3e-008 245 3 M1125_1.02 (NKX1-1)_(Mus_musculus)_(DBD_1.00) NNTAATKRNN 1.6e-002 2.2e-005 -10.73 0.0 147 491 229 567 0.29939 8.9e-008 245 3 M1157_1.02 (HOXB9)_(PBM_CONSTRUCTS)_(DBD_1.00) WTTWATKRBN 6.8e-011 9.1e-014 -30.02 0.0 169 491 287 561 0.34420 3.7e-016 245 3 M1163_1.02 (NKX6-3)_(PBM_CONSTRUCTS)_(DBD_1.00) NWTAATKRN 4.8e-005 6.5e-008 -16.55 0.0 152 492 241 554 0.30894 2.7e-010 245 3 M1581_1.02 (CIC)_(Mus_musculus)_(DBD_1.00) NNTGCTGACW 6.1e-003 8.2e-006 -11.71 0.0 315 491 439 588 0.64155 3.3e-008 245 3 M1863_1.02 FOXD1 GTAAACAW 3.1e0000 4.2e-003 -5.48 0.0 85 493 131 539 0.17241 1.7e-005 246 3 M2267_1.02 CDX2 TTTTATKRCHB 1.2e-008 1.7e-011 -24.82 0.0 166 490 267 541 0.33878 6.8e-014 244 3 M2270_1.02 DUX4 TAAYYYAATCA 1.9e-002 2.5e-005 -10.59 0.0 158 490 218 503 0.32245 1.0e-007 244 3 M2278_1.02 FOS DVTGASTCATB 1.7e-021 2.2e-024 -54.46 0.0 216 490 361 539 0.44082 9.2e-027 244 3 M2287_1.02 (HOXC9)_(Mus_musculus)_(DBD_0.98) RGCMATAAATCAB 7.2e-024 9.7e-027 -59.90 0.0 150 488 294 546 0.30738 4.0e-029 243 3 M2289_1.02 JUN DDRATGATGTMAT 9.1e-013 1.2e-015 -34.33 0.0 162 488 265 512 0.33197 5.0e-018 243 3 M2292_1.02 JUND DRTGASTCATS 1.2e-023 1.6e-026 -59.39 0.0 216 490 354 518 0.44082 6.6e-029 244 3 M2296_1.02 MAFK MWDASTCAGCAWWWW 4.1e-003 5.6e-006 -12.10 0.0 116 486 190 556 0.23868 2.3e-008 242 3 M2385_1.02 FOXP2 RWGTAAACAVR 3.5e0000 4.7e-003 -5.36 0.0 132 490 191 545 0.26939 1.9e-005 244 3 M2387_1.02 SREBF1 RTGGGGTGAB 3.4e0000 4.6e-003 -5.38 0.0 155 491 217 542 0.31568 1.9e-005 245 3 M2388_1.02 SREBF2 RTGGGGTGAY 1.2e-001 1.6e-004 -8.76 0.0 181 491 260 553 0.36864 6.4e-007 245 3 M4451_1.02 ATF3 GGTCACGTGRS 3.5e0000 4.7e-003 -5.35 0.0 170 490 203 461 0.34694 1.9e-005 244 3 M4452_1.02 BATF TYYYRWWATGASTCA 1.3e-005 1.8e-008 -17.85 0.0 222 486 333 562 0.45679 7.3e-011 242 3 M4463_1.02 IRF4 DNWSNRGAAVTGAVWSWD 1.1e-001 1.5e-004 -8.80 0.0 227 483 339 594 0.46998 6.3e-007 241 3 M4526_1.02 SMARCC1 DSRVDGTGASTCAKV 1.3e-016 1.8e-019 -43.15 0.0 224 486 362 544 0.46091 7.5e-022 242 3 M4565_1.02 FOSL2 VDGGATGASTCAYH 1.9e-014 2.5e-017 -38.23 0.0 213 487 321 502 0.43737 1.0e-019 243 3 M4567_1.02 FOXA2 NMWRWGTAAACANNN 7.7e0000 1.0e-002 -4.56 0.0 210 486 293 568 0.43210 4.3e-005 242 3 M4619_1.02 FOSL1 BGGTGASTCAT 2.2e-018 3.0e-021 -47.25 0.0 226 490 346 508 0.46122 1.2e-023 244 3 M4623_1.02 JUNB NDRTGASTCATNYHY 1.9e-017 2.5e-020 -45.12 0.0 216 486 337 511 0.44444 1.0e-022 242 3 M4629_1.02 NFE2 VRTGACTCAGCANWWYB 6.2e-011 8.4e-014 -30.11 0.0 190 484 269 465 0.39256 3.5e-016 241 3 M4680_1.02 BACH1 GTCACGTG 1.9e0000 2.5e-003 -5.98 0.0 221 493 292 540 0.44828 1.0e-005 246 3 M4681_1.02 BACH2 TGCTGAGTCA 1.4e-009 1.9e-012 -26.97 0.0 177 491 260 489 0.36049 7.9e-015 245 3 M5284_1.02 ALX3 BNTAATTRGY 4.5e-001 6.1e-004 -7.40 0.0 147 491 217 554 0.29939 2.5e-006 245 3 M5287_1.02 ALX4 HTAATYNAATTAN 5.2e-001 7.0e-004 -7.26 0.0 158 488 213 505 0.32377 2.9e-006 243 3 M5292_1.02 ATF4 RKATGAYGCAATM 4.1e-012 5.5e-015 -32.84 0.0 158 488 246 482 0.32377 2.2e-017 243 3 M5293_1.02 ATF7 NKATGACGTCATHN 4.1e-016 5.5e-019 -42.05 0.0 159 487 189 324 0.32649 2.3e-021 243 3 M5302_1.02 BATF3 TGATGACGTCATCA 2.5e-016 3.3e-019 -42.55 0.0 189 487 129 173 0.38809 1.4e-021 243 3 M5310_1.02 BSX NTAATBRS 4.6e-008 6.1e-011 -23.51 0.0 145 493 243 551 0.29412 2.5e-013 246 3 M5323_1.02 CREB3 KGRTGACGTCAYNV 3.9e-010 5.3e-013 -28.26 0.0 221 487 212 314 0.45380 2.2e-015 243 3 M5325_1.02 CREB3L1 TGRTGACGTGGCAB 1.7e-001 2.3e-004 -8.38 0.0 385 487 320 360 0.79055 9.5e-007 243 3 M5342_1.02 DLX4 NTAATTRN 6.4e-006 8.7e-009 -18.56 0.0 113 493 200 570 0.22921 3.5e-011 246 3 M5343_1.02 DLX5 NTAATTRN 1.9e-001 2.6e-004 -8.27 0.0 117 493 188 577 0.23732 1.0e-006 246 3 M5344_1.02 DLX6 NTAATTRB 7.6e-005 1.0e-007 -16.10 0.0 113 493 196 570 0.22921 4.1e-010 246 3 M5348_1.02 DRGX NTAATYHAATTAN 8.8e0000 1.2e-002 -4.43 0.0 158 488 194 473 0.32377 4.9e-005 243 3 M5349_1.02 DUXA NTRAYYTAATCAN 2.2e-005 3.0e-008 -17.31 0.0 168 488 254 530 0.34426 1.2e-010 243 3 M5388_1.02 EMX2 NYTAATTAVB 5.3e-003 7.2e-006 -11.84 0.0 147 491 219 533 0.29939 2.9e-008 245 3 M5390_1.02 EN1 VBTAATTRSB 1.5e-005 2.0e-008 -17.72 0.0 157 491 255 567 0.31976 8.2e-011 245 3 M5394_1.02 EN2 NNTAATTRVN 3.6e-003 4.8e-006 -12.24 0.0 129 491 206 558 0.26273 2.0e-008 245 3 M5414_1.02 ESX1 DNTAATTRRN 9.7e-005 1.3e-007 -15.85 0.0 163 491 261 572 0.33198 5.3e-010 245 3 M5427_1.02 EVX1 SNTAATYABB 1.4e0000 1.8e-003 -6.30 0.0 221 491 304 560 0.45010 7.5e-006 245 3 M5428_1.02 EVX2 NNTAATKABB 2.3e-001 3.1e-004 -8.09 0.0 221 491 308 560 0.45010 1.2e-006 245 3 M5435_1.02 FOXB1 TCGCYGTGTCATTC 1.2e0000 1.6e-003 -6.44 0.0 183 487 218 456 0.37577 6.6e-006 243 3 M5446_1.02 FOXD4L2 RTAAACA 8.7e-003 1.2e-005 -11.35 0.0 214 494 312 573 0.43320 4.8e-008 246 3 M5460_1.02 FOXL1 RTAAACA 1.8e-005 2.4e-008 -17.55 0.0 212 494 318 564 0.42915 9.7e-011 246 3 M5480_1.02 GBX1 RBTAATTRGB 4.7e-003 6.4e-006 -11.96 0.0 147 491 220 536 0.29939 2.6e-008 245 3 M5481_1.02 GBX2 NYTAATTRSB 1.1e-006 1.5e-009 -20.29 0.0 137 491 231 558 0.27902 6.3e-012 245 3 M5502_1.02 GSX1 NBTAATKRSN 6.8e-003 9.2e-006 -11.59 0.0 147 491 230 565 0.29939 3.8e-008 245 3 M5503_1.02 GSX2 DYTAATKRVN 9.5e-002 1.3e-004 -8.96 0.0 115 491 184 565 0.23422 5.2e-007 245 3 M5518_1.02 HMX1 NDTTAATTGNT 3.4e-002 4.6e-005 -9.98 0.0 136 490 212 563 0.27755 1.9e-007 244 3 M5519_1.02 HMX2 NDTTAAKTGBT 4.9e-004 6.6e-007 -14.23 0.0 102 490 179 573 0.20816 2.7e-009 244 3 M5520_1.02 HMX3 BNTTAAKTGNY 2.5e-002 3.4e-005 -10.28 0.0 102 490 173 576 0.20816 1.4e-007 244 3 M5541_1.02 HOXB2 NNTAATKANN 4.6e-003 6.2e-006 -11.99 0.0 147 491 232 569 0.29939 2.5e-008 245 3 M5542_1.02 HOXB3 NYTAATKRNN 1.9e-003 2.5e-006 -12.89 0.0 147 491 233 567 0.29939 1.0e-008 245 3 M5543_1.02 HOXB5 NHTAATKRNN 3.6e-004 4.8e-007 -14.55 0.0 113 491 198 585 0.23014 2.0e-009 245 3 M5544_1.02 HOXC10 DTTTWATKDB 7.3e-006 9.8e-009 -18.44 0.0 171 491 273 567 0.34827 4.0e-011 245 3 M5547_1.02 HOXC11 DGTCRTWAAAH 3.7e-005 5.0e-008 -16.80 0.0 86 490 154 537 0.17551 2.1e-010 244 3 M5551_1.02 HOXC12 TTTTATTRC 2.4e-001 3.3e-004 -8.02 0.0 248 492 340 564 0.50407 1.3e-006 245 3 M5553_1.02 HOXC13 CYAATAAAAH 3.4e-002 4.6e-005 -9.98 0.0 121 491 190 552 0.24644 1.9e-007 245 3 M5555_1.02 HOXD11 RTCGTAAAAH 6.3e-006 8.4e-009 -18.59 0.0 69 491 126 498 0.14053 3.4e-011 245 3 M5557_1.02 HOXD12 GTAATAAAA 1.5e-003 2.0e-006 -13.14 0.0 148 492 233 563 0.30081 8.0e-009 245 3 M5582_1.02 IRX5 SWTGTYRTGTWN 1.1e0000 1.5e-003 -6.48 0.0 217 489 306 572 0.44376 6.3e-006 244 3 M5583_1.02 ISL2 YTAAKTGC 7.7e-004 1.0e-006 -13.77 0.0 167 493 264 579 0.33874 4.2e-009 246 3 M5587_1.02 JDP2 ATGASTCAT 1.2e-025 1.7e-028 -63.96 0.0 236 492 371 507 0.47967 6.8e-031 245 3 M5602_1.02 LHX9 YTAATTRN 3.2e-003 4.3e-006 -12.36 0.0 147 493 231 565 0.29817 1.7e-008 246 3 M5604_1.02 LMX1A YTAATTAA 5.3e-002 7.1e-005 -9.55 0.0 131 493 194 529 0.26572 2.9e-007 246 3 M5605_1.02 LMX1B TTAATTRN 6.0e-002 8.1e-005 -9.42 0.0 131 493 200 552 0.26572 3.3e-007 246 3 M5621_1.02 MEIS3 SCTGTCAH 5.2e-010 7.0e-013 -27.99 0.0 151 493 274 595 0.30629 2.8e-015 246 3 M5623_1.02 MEOX1 VSTAATTAHC 4.0e-003 5.3e-006 -12.14 0.0 221 491 314 553 0.45010 2.2e-008 245 3 M5624_1.02 MEOX2 DSTAATTAWN 1.9e-004 2.6e-007 -15.16 0.0 223 491 334 576 0.45418 1.1e-009 245 3 M5631_1.02 MIXL1 NBTAATTRVN 1.2e-004 1.7e-007 -15.60 0.0 131 491 218 567 0.26680 6.9e-010 245 3 M5635_1.02 MNX1 TTTAATTRNH 1.8e-003 2.5e-006 -12.90 0.0 147 491 230 558 0.29939 1.0e-008 245 3 M5637_1.02 MSX1 TAATTGSWWTTTAATTRS 7.8e-002 1.1e-004 -9.15 0.0 53 483 82 428 0.10973 4.4e-007 241 3 M5660_1.02 NFIA TTGGCANNDTGCCAR 6.2e-001 8.4e-004 -7.08 0.0 330 486 251 316 0.67901 3.5e-006 242 3 M5662_1.02 NFIB TTGGCAHNDTGCCAR 3.4e0000 4.6e-003 -5.39 0.0 330 486 254 324 0.67901 1.9e-005 242 3 M5672_1.02 NOTO NBTAATTARN 4.9e0000 6.7e-003 -5.01 0.0 149 491 214 557 0.30346 2.7e-005 245 3 M5689_1.02 NRL DWWNTGCTGAC 4.1e-002 5.5e-005 -9.81 0.0 368 490 500 597 0.75102 2.2e-007 244 3 M5709_1.02 PAX7 WAATYRATTA 7.5e0000 1.0e-002 -4.59 0.0 115 491 129 403 0.23422 4.2e-005 245 3 M5714_1.02 PHOX2A TAATYYAATTA 4.5e0000 6.1e-003 -5.10 0.0 158 490 206 503 0.32245 2.5e-005 244 3 M5715_1.02 PHOX2B TAATYYAATTA 2.8e0000 3.8e-003 -5.57 0.0 158 490 209 508 0.32245 1.6e-005 244 3 M5722_1.02 PKNOX2 TGACACCTGTCA 1.7e-003 2.3e-006 -12.97 0.0 167 489 153 307 0.34151 9.6e-009 244 3 M5746_1.02 POU6F2 WTAATKAGST 5.3e-001 7.2e-004 -7.24 0.0 145 491 212 548 0.29532 2.9e-006 245 3 M5771_1.02 RAX DYTAATTRRY 2.6e-001 3.5e-004 -7.95 0.0 147 491 221 562 0.29939 1.4e-006 245 3 M5772_1.02 RAX2 BTAATTRR 1.8e-003 2.4e-006 -12.92 0.0 131 493 212 566 0.26572 9.9e-009 246 3 M5807_1.02 SHOX2 YTAATTRR 9.3e-003 1.3e-005 -11.29 0.0 157 493 239 559 0.31846 5.1e-008 246 3 M5932_1.02 TFEC VTCAYGTGAY 1.0e0000 1.4e-003 -6.56 0.0 251 491 337 557 0.51120 5.8e-006 245 3 M5934_1.02 TGIF2 TGACASCTGTCA 2.9e-005 3.9e-008 -17.05 0.0 167 489 188 375 0.34151 1.6e-010 244 3 M5935_1.02 TGIF2LX TGACASCTGTCA 2.1e-003 2.9e-006 -12.75 0.0 167 489 157 316 0.34151 1.2e-008 244 3 M5944_1.02 VAX1 YTAATTAN 3.7e-003 5.0e-006 -12.21 0.0 131 493 208 558 0.26572 2.0e-008 246 3 M5945_1.02 VAX2 YTAATTAN 4.7e-004 6.3e-007 -14.27 0.0 221 493 323 565 0.44828 2.6e-009 246 3 M5958_1.02 ZBED1 YATGTCGCGAYAG 3.9e0000 5.3e-003 -5.24 0.0 8 488 10 115 0.01639 2.2e-005 243 3 M5998_1.02 (CREB5)_(Mus_musculus)_(DBD_1.00) DRTGACGTCATN 3.0e-017 4.0e-020 -44.66 0.0 161 489 223 391 0.32924 1.6e-022 244 3 M6114_1.02 FOXA1 WAWGYAAAYA 5.1e-002 6.9e-005 -9.58 0.0 209 491 304 573 0.42566 2.8e-007 245 3 M6152_1.02 ATF1 VTGACGTCAV 4.6e-006 6.3e-009 -18.89 0.0 171 491 247 502 0.34827 2.6e-011 245 3 M6157_1.02 BARX2 TYRWTAATKR 5.9e-002 8.0e-005 -9.43 0.0 87 491 145 550 0.17719 3.3e-007 245 3 M6167_1.02 CDX1 HCATAAAD 1.2e-008 1.6e-011 -24.86 0.0 113 493 214 584 0.22921 6.5e-014 246 3 M6174_1.02 CEBPZ AGCCAATSAGH 9.3e0000 1.3e-002 -4.38 0.0 408 490 446 498 0.83265 5.2e-005 244 3 M6180_1.02 CREB1 RTGACGTMA 4.7e-010 6.3e-013 -28.09 0.0 160 492 272 561 0.32520 2.6e-015 245 3 M6181_1.02 CREM CRVTGACGTCA 8.6e-009 1.2e-011 -25.18 0.0 196 490 300 536 0.40000 4.8e-014 244 3 M6184_1.02 CUX1 RBRSNDATCGATSK 8.2e-001 1.1e-003 -6.80 0.0 65 487 106 516 0.13347 4.6e-006 243 3 M6186_1.02 DBP KVTTRCATAAB 3.9e0000 5.3e-003 -5.24 0.0 88 490 139 558 0.17959 2.2e-005 244 3 M6189_1.02 DLX3 GMTAATTRSW 2.7e0000 3.6e-003 -5.63 0.0 113 491 164 527 0.23014 1.5e-005 245 3 M6197_1.02 E4F1 YGTKACGTC 2.2e-004 2.9e-007 -15.04 0.0 206 492 260 467 0.41870 1.2e-009 245 3 M6228_1.02 FOSB CTGACTCAYV 2.2e-014 2.9e-017 -38.07 0.0 231 491 384 585 0.47047 1.2e-019 245 3 M6234_1.02 FOXA3 RVWAARYAAAYAD 3.7e-002 5.0e-005 -9.91 0.0 154 488 237 569 0.31557 2.0e-007 243 3 M6235_1.02 FOXC1 CYWAAGTAAACAWHG 5.3e-002 7.1e-005 -9.55 0.0 130 486 185 499 0.26749 2.9e-007 242 3 M6238_1.02 FOXF1 WAAATAAACAW 1.7e-001 2.3e-004 -8.38 0.0 132 490 200 552 0.26939 9.4e-007 244 3 M6239_1.02 FOXF2 HWADGTAAACA 6.5e-002 8.8e-005 -9.33 0.0 28 490 62 543 0.05714 3.6e-007 244 3 M6245_1.02 FOXO1 AAAWWVWAAACAAVHH 4.3e0000 5.8e-003 -5.15 0.0 49 485 89 568 0.10103 2.4e-005 242 3 M6246_1.02 FOXO3 MKGWAAACAARYM 2.6e0000 3.5e-003 -5.65 0.0 90 488 147 573 0.18443 1.4e-005 243 3 M6256_1.02 GATA4 RSWGATAAV 2.4e0000 3.3e-003 -5.71 0.0 200 492 290 589 0.40650 1.3e-005 245 3 M6258_1.02 GATA6 NWGATAA 2.3e-002 3.1e-005 -10.37 0.0 142 494 221 568 0.28745 1.3e-007 246 3 M6277_1.02 HLF SKRTTACRYAAYH 1.5e-003 2.0e-006 -13.13 0.0 162 488 214 466 0.33197 8.2e-009 243 3 M6285_1.02 ONECUT1 WWTATTGATTTWDH 3.1e0000 4.2e-003 -5.46 0.0 117 487 164 511 0.24025 1.7e-005 243 3 M6289_1.02 HOXA9 WCATAAAYYRTH 7.4e-008 1.0e-010 -23.03 0.0 107 489 194 548 0.21881 4.1e-013 244 3 M6290_1.02 HOXA13 CCAATAAWAHC 4.2e-002 5.6e-005 -9.79 0.0 140 490 213 550 0.28571 2.3e-007 244 3 M6291_1.02 HOXA1 CATCCATCMA 3.3e-001 4.5e-004 -7.71 0.0 249 491 320 526 0.50713 1.8e-006 245 3 M6292_1.02 HOXA5 CATTAATYAR 6.2e-008 8.3e-011 -23.21 0.0 93 491 173 539 0.18941 3.4e-013 245 3 M6295_1.02 HOXB1 CCATCMATCW 5.9e-004 8.0e-007 -14.04 0.0 159 491 212 468 0.32383 3.3e-009 245 3 M6296_1.02 HOXB6 KKCATMAATCAWT 1.5e-011 2.0e-014 -31.56 0.0 158 488 234 458 0.32377 8.1e-017 243 3 M6297_1.02 HOXB7 MATYAATCAA 5.2e-018 7.1e-021 -46.40 0.0 121 491 235 528 0.24644 2.9e-023 245 3 M6298_1.02 HOXB8 BMATTAATCAA 1.1e-013 1.4e-016 -36.49 0.0 132 490 223 488 0.26939 5.8e-019 244 3 M6299_1.02 HOXC6 AAAGTAATAAATCAT 1.1e-005 1.5e-008 -18.02 0.0 112 486 135 350 0.23045 6.2e-011 242 3 M6300_1.02 HOXC8 GSBHATYAATSAAR 5.8e-009 7.9e-012 -25.57 0.0 169 487 278 552 0.34702 3.2e-014 243 3 M6303_1.02 HOXD4 TTAATTKW 1.9e-004 2.5e-007 -15.19 0.0 173 493 269 566 0.35091 1.0e-009 246 3 M6304_1.02 HOXD9 HMATNAAWYT 2.2e-001 2.9e-004 -8.14 0.0 113 491 178 559 0.23014 1.2e-006 245 3 M6315_1.02 ISL1 SYTAATR 7.0e0000 9.5e-003 -4.66 0.0 144 494 203 548 0.29150 3.9e-005 246 3 M6328_1.02 LHX2 YRSDTKYAATWAG 2.9e0000 3.9e-003 -5.55 0.0 120 488 165 500 0.24590 1.6e-005 243 3 M6331_1.02 MAFB WGCTGACDS 5.5e-005 7.5e-008 -16.41 0.0 292 492 428 598 0.59350 3.0e-010 245 3 M6332_1.02 MAF KTGCTGAC 6.4e-003 8.6e-006 -11.66 0.0 315 493 444 597 0.63895 3.5e-008 246 3 M6333_1.02 MAFG MATGACT 1.1e-021 1.4e-024 -54.90 0.0 172 494 334 591 0.34818 5.8e-027 246 3 M6343_1.02 MEIS1 CDTWAAVCTGTCA 8.1e-005 1.1e-007 -16.03 0.0 128 488 206 537 0.26230 4.5e-010 243 3 M6344_1.02 MEIS2 KGACAVCTGTCAA 3.8e-002 5.1e-005 -9.88 0.0 126 488 187 521 0.25820 2.1e-007 243 3 M6345_1.02 MITF VKCACATGWY 6.0e-004 8.1e-007 -14.03 0.0 225 491 337 582 0.45825 3.3e-009 245 3 M6347_1.02 MSX2 TAATTNK 3.5e0000 4.8e-003 -5.35 0.0 18 494 41 543 0.03644 1.9e-005 246 3 M6357_1.02 NANOG KTTAATGG 1.1e0000 1.5e-003 -6.48 0.0 219 493 300 559 0.44422 6.3e-006 246 3 M6359_1.02 NFE2L1 NATGACD 6.7e-028 9.0e-031 -69.19 0.0 164 494 340 595 0.33198 3.7e-033 246 3 M6360_1.02 NFE2L2 VRTGACTCAGCA 3.2e-003 4.3e-006 -12.36 0.0 217 489 328 587 0.44376 1.8e-008 244 3 M6368_1.02 NFIL3 VKVMRTTACRTAAY 2.2e-002 3.0e-005 -10.43 0.0 83 487 117 432 0.17043 1.2e-007 243 3 M6380_1.02 NOBOX HTAATTRSY 3.0e-001 4.1e-004 -7.80 0.0 116 492 179 554 0.23577 1.7e-006 245 3 M6406_1.02 PAX2 RHTCAGTSAYGMGTGAYW 3.8e-012 5.2e-015 -32.90 0.0 201 483 332 559 0.41615 2.1e-017 241 3 M6411_1.02 PAX8 BTVAYTSRMGYRKR 1.3e-001 1.7e-004 -8.67 0.0 245 487 358 594 0.50308 7.1e-007 243 3 M6412_1.02 PBX1 VHMATCAATCAAWTH 9.4e-012 1.3e-014 -32.00 0.0 146 486 267 571 0.30041 5.2e-017 242 3 M6413_1.02 PBX2 VMATCAATCAMWTYM 3.6e-004 4.8e-007 -14.55 0.0 142 486 236 579 0.29218 2.0e-009 242 3 M6415_1.02 PDX1 CTAATTACY 2.3e-003 3.1e-006 -12.69 0.0 222 492 297 516 0.45122 1.3e-008 245 3 M6419_1.02 PKNOX1 HATCARTCAABYB 3.4e-009 4.6e-012 -26.11 0.0 132 488 238 568 0.27049 1.9e-014 243 3 M6426_1.02 POU3F2 CATRAATWWT 1.1e0000 1.5e-003 -6.49 0.0 97 491 153 557 0.19756 6.2e-006 245 3 M6427_1.02 POU4F2 MARCTCATTAATR 7.9e0000 1.1e-002 -4.53 0.0 130 488 177 510 0.26639 4.4e-005 243 3 M6440_1.02 PRRX2 YTAATTR 2.0e0000 2.7e-003 -5.92 0.0 122 494 182 554 0.24696 1.1e-005 246 3 M6510_1.02 TEF TGTTTATRTAAMTK 3.5e-004 4.7e-007 -14.56 0.0 189 487 286 558 0.38809 1.9e-009 243 3 M6517_1.02 TFE3 RGTCAYGTGV 4.9e0000 6.6e-003 -5.03 0.0 229 491 319 578 0.46640 2.7e-005 245 3 M6519_1.02 TGIF1 MWGSTGACACCTSMCA 2.1e0000 2.8e-003 -5.89 0.0 285 485 392 582 0.58763 1.1e-005 242 3 M6536_1.02 XBP1 GACGTGKCMWWW 2.7e0000 3.7e-003 -5.60 0.0 229 489 218 378 0.46830 1.5e-005 244 3 M6546_1.02 ZFHX3 ATTAWTAATTA 5.8e0000 7.8e-003 -4.85 0.0 144 490 178 468 0.29388 3.2e-005 244 ## # Detailed descriptions of columns in this file: # # db: The name of the database (file name) that contains the motif. # id: A name for the motif that is unique in the motif database file. # alt: An alternate name of the motif that may be provided # in the motif database file. # consensus: A consensus sequence computed from the motif. # E-value: The expected number motifs that would have least one. # region as enriched for best matches to the motif as the reported region. # The E-value is the p-value multiplied by the number of motifs in the # input database(s). # adj_p-value: The probability that any tested region would be as enriched for # best matches to this motif as the reported region is. # By default the p-value is calculated by using the one-tailed binomial # test on the number of sequences with a match to the motif # that have their best match in the reported region, corrected for # the number of regions and score thresholds tested. # The test assumes that the probability that the best match in a sequence # falls in the region is the region width divided by the # number of places a motif # can align in the sequence (sequence length minus motif width plus 1). # When CentriMo is run in discriminative mode with a negative # set of sequences, the p-value of a region is calculated # using the Fisher exact test on the # enrichment of best matches in the positive sequences relative # to the negative sequences, corrected # for the number of regions and score thresholds tested. # The test assumes that the probability that the best match (if any) # falls into a given region # is the same for all positive and negative sequences. # log_adj_p-value: Log of adjusted p-value. # bin_location: Location of the center of the most enriched region. # bin_width: The width (in sequence positions) of the most enriched region. # A best match to the motif is counted as being in the region if the # center of the motif falls in the region. # total_width: The window maximal size which can be reached for this motif: # rounded(sequence length - motif length +1)/2 # sites_in_bin: The number of (positive) sequences whose best match to the motif # falls in the reported region. # Note: This number may be less than the number of # (positive) sequences that have a best match in the region. # The reason for this is that a sequence may have many matches that score # equally best. # If n matches have the best score in a sequence, 1/n is added to the # appropriate bin for each match. # total_sites: The number of sequences containing a match to the motif # above the score threshold. # p_success: The probability of falling in the enriched window: # bin width / total width # p-value: The uncorrected p-value before it gets adjusted to the # number of multiple tests to give the adjusted p-value. # mult_tests: This is the number of multiple tests (n) done for this motif. # It was used to correct the original p-value of a region for # multiple tests using the formula: # p' = 1 - (1-p)^n where p is the uncorrected p-value. # The number of multiple tests is the number of regions # considered times the number of score thresholds considered. # It depends on the motif length, sequence length, and the type of # optimizations being done (central enrichment, local enrichment, # score optimization).