******************************************************************************** MEME - Motif discovery tool ******************************************************************************** MEME version 4.12.0 (Release date: Tue Jun 27 16:22:50 2017 -0700) For further information on how to interpret these results or to get a copy of the MEME software please access http://meme-suite.org . This file may be used as input to the MAST algorithm for searching sequence databases for matches to groups of motifs. MAST is available for interactive use and downloading at http://meme-suite.org . ******************************************************************************** ******************************************************************************** REFERENCE ******************************************************************************** If you use this program in your research, please cite: Timothy L. Bailey and Charles Elkan, "Fitting a mixture model by expectation maximization to discover motifs in biopolymers", Proceedings of the Second International Conference on Intelligent Systems for Molecular Biology, pp. 28-36, AAAI Press, Menlo Park, California, 1994. ******************************************************************************** ******************************************************************************** TRAINING SET ******************************************************************************** DATAFILE= /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP7.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered ALPHABET= ACGT Sequence name Weight Length Sequence name Weight Length ------------- ------ ------ ------------- ------ ------ chr5:136729942-136730442 1.0000 100 chr4:77075953-77076453 1.0000 100 chr4:95531085-95531585 1.0000 100 chr17:4788342-4788842 1.0000 100 chr10:116961503-11696200 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chr14:36835070-36835570 1.0000 100 chr10:129605986-12960648 1.0000 100 chr16:80996622-80997122 1.0000 100 chr1:151988337-151988837 1.0000 100 chr16:80066853-80067353 1.0000 100 chr15:70033559-70034059 1.0000 100 chr8:42889486-42889986 1.0000 100 chr6:168147158-168147658 1.0000 100 chr5:175378398-175378898 1.0000 100 chr17:55067595-55068095 1.0000 100 chr10:75379149-75379649 1.0000 100 chr5:6419336-6419836 1.0000 100 chr10:116961303-11696180 1.0000 100 chr10:74418388-74418888 1.0000 100 chr3:136802543-136803043 1.0000 100 chr6:15735640-15736140 1.0000 100 chr21:33136858-33137358 1.0000 100 chr15:70494057-70494557 1.0000 100 chr13:112346345-11234684 1.0000 100 chr19:38666780-38667280 1.0000 100 chr1:39261684-39262184 1.0000 100 chr17:78558298-78558798 1.0000 100 chr6:11270041-11270541 1.0000 100 chr5:38695437-38695937 1.0000 100 chr15:70200481-70200981 1.0000 100 chr1:180424778-180425278 1.0000 100 chr17:48679343-48679843 1.0000 100 chr6:21264185-21264685 1.0000 100 chr15:83061708-83062208 1.0000 100 chr1:155244568-155245068 1.0000 100 chr19:28289638-28290138 1.0000 100 chr10:71262002-71262502 1.0000 100 chr20:21090696-21091196 1.0000 100 chr10:68462517-68463017 1.0000 100 chr10:75498401-75498901 1.0000 100 chr1:233635928-233636428 1.0000 100 chr2:26342830-26343330 1.0000 100 chr6:41767073-41767573 1.0000 100 chr15:65533001-65533501 1.0000 100 chr15:69143674-69144174 1.0000 100 chr16:22898095-22898595 1.0000 100 chr15:84753855-84754355 1.0000 100 chr10:117967076-11796757 1.0000 100 chr17:34981753-34982253 1.0000 100 chr5:73289270-73289770 1.0000 100 chr1:234619693-234620193 1.0000 100 chr20:46085118-46085618 1.0000 100 chr22:38606511-38607011 1.0000 100 chr16:25049587-25050087 1.0000 100 chr22:46967620-46968120 1.0000 100 chr14:26394346-26394846 1.0000 100 chr10:28678877-28679377 1.0000 100 chr1:244347910-244348410 1.0000 100 chr1:26470555-26471055 1.0000 100 chr15:50810098-50810598 1.0000 100 chr5:124908888-124909388 1.0000 100 chr15:70713864-70714364 1.0000 100 chr5:124656128-124656628 1.0000 100 chr19:28425292-28425792 1.0000 100 chr1:41870097-41870597 1.0000 100 chr12:1217507-1218007 1.0000 100 chr17:80671142-80671642 1.0000 100 chr8:37302607-37303107 1.0000 100 chr14:76486239-76486739 1.0000 100 chr5:174514877-174515377 1.0000 100 chr16:85626442-85626942 1.0000 100 chr10:121310106-12131060 1.0000 100 chr6:2028597-2029097 1.0000 100 chr12:57010781-57011281 1.0000 100 chr5:14428400-14428900 1.0000 100 chr1:234723889-234724389 1.0000 100 chr11:27796287-27796787 1.0000 100 chr17:48492582-48493082 1.0000 100 chr17:28926055-28926555 1.0000 100 chr1:225425172-225425672 1.0000 100 chr1:229893866-229894366 1.0000 100 chr1:12478146-12478646 1.0000 100 chr6:4139230-4139730 1.0000 100 chr1:234534083-234534583 1.0000 100 chr9:36891464-36891964 1.0000 100 chr2:31008524-31009024 1.0000 100 chr19:40920940-40921440 1.0000 100 chr21:38985785-38986285 1.0000 100 chr19:33639015-33639515 1.0000 100 chr5:137516467-137516967 1.0000 100 ******************************************************************************** ******************************************************************************** COMMAND LINE SUMMARY ******************************************************************************** This information can also be useful in the event you wish to report a problem with the MEME software. command: meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP7.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/seqs-centered -oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP7.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/meme_out -mod zoops -nmotifs 10 -minw 5 -maxw 50 -bfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP7.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background -dna -revcomp -nostatus model: mod= zoops nmotifs= 10 evt= inf object function= E-value of product of p-values width: minw= 5 maxw= 50 width: wg= 11 ws= 1 endgaps= yes nsites: minsites= 2 maxsites= 600 wnsites= 0.8 theta: spmap= uni spfuzz= 0.5 global: substring= yes branching= no wbranch= no em: prior= dirichlet b= 0.01 maxiter= 50 distance= 1e-05 data: n= 60000 N= 600 shuffle= -1 strands: + - sample: seed= 0 ctfrac= -1 maxwords= -1 Letter frequencies in dataset: A 0.291 C 0.209 G 0.209 T 0.291 Background letter frequencies (from /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP7.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background): A 0.279 C 0.221 G 0.221 T 0.279 ******************************************************************************** ******************************************************************************** MOTIF AVCCTRTAATTA MEME-1 width = 12 sites = 317 llr = 2523 E-value = 2.3e-156 ******************************************************************************** -------------------------------------------------------------------------------- Motif AVCCTRTAATTA MEME-1 Description -------------------------------------------------------------------------------- Simplified A 732223:8a::9 pos.-specific C 13551121:::: probability G 2322:6:1:::: matrix T :1218:81:aa1 bits 2.2 2.0 1.7 ** 1.5 *** Relative 1.3 * **** Entropy 1.1 * **** (11.5 bits) 0.9 *** **** 0.7 * ******** 0.4 * ******** 0.2 ************ 0.0 ------------ Multilevel AACCTGTAATTA consensus GG A sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVCCTRTAATTA MEME-1 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr6:165846054-165846554 + 44 8.76e-08 TTTCCAGAGA AGCCTGTAATTA TCATTCCACC chr4:25484208-25484708 - 48 2.86e-07 TATGTACTGA AACCTGTAATTA ATGCCAGAGA chr11:116232342-11623284 + 80 2.86e-07 CCGCTCACTT ACCCTGTAATTA GACGGAGCT chr6:31714106-31714606 + 77 2.86e-07 CAACATTCCT ACCCTGTAATTA TCCCTGCCAG chr5:76838479-76838979 + 12 2.86e-07 AGGAGTTTCA AACCTGTAATTA ATTTCCTGGT chr10:71262002-71262502 + 21 3.73e-07 CGTTCTAACC AGGCTGTAATTA CGGCTGGCAC chr10:14467894-14468394 + 57 3.73e-07 AGAACGTCTG AGGCTGTAATTA TCAGCCCATT chr19:511157-511657 + 19 3.73e-07 TGATCTCACC AGGCTGTAATTA CCTCTTTGTG chr6:57472811-57473311 - 26 6.82e-07 CTTTAATACA AAGCTGTAATTA ATGGGTATTA chr1:113021587-113022087 + 66 6.82e-07 cacttatcac aagctgtaatta taccatacgt chr20:47264359-47264859 + 14 6.82e-07 cactgtgccc agccTATAATTA AGTTTTTAAC chr15:70713864-70714364 + 16 9.32e-07 CTTCTATAGT ACCCTATAATTA CCAACATTCT chr2:12296833-12297333 + 20 1.51e-06 ATACATAATA AGCATGTAATTA CACACTGAGA chr7:101728152-101728652 - 65 1.51e-06 CAATGCAATC AACGTGTAATTA ACTGTGTTAC chr10:74691117-74691617 - 18 2.28e-06 TAGAAGCATT ACCATGTAATTA AAGCAAACCT chr5:174410517-174411017 - 38 2.28e-06 CTAACCTAGG ACACTGTAATTA GCTCTTTAAT chr14:95517417-95517917 - 12 2.28e-06 CAATCATGCA ACCATGTAATTA CTCGGAAAAA chr2:149657404-149657904 + 1 2.28e-06 . AAACTGTAATTA TGCTCTCAGC chr17:2611592-2612092 - 47 2.28e-06 TTCTCACAAT ACACTGTAATTA TCTGCCCTGA chr4:95531085-95531585 - 15 2.28e-06 TTAGGAGACA GACCTGTAATTA TCAGCAGCAG chr17:80671142-80671642 + 25 2.53e-06 AAATCAAAAC ACTCTGTAATTA TTGGGTTCTT chr20:36466972-36467472 + 38 2.53e-06 ACTGTGTGAC ACTCTGTAATTA AGCGTCTGCT chr5:43422083-43422583 + 30 2.53e-06 CATAGCTTTC ACTCTGTAATTA AATGTGTGAT chr12:108822738-10882323 + 39 2.79e-06 TGTAACTTAC AGCCTGCAATTA ACTGATAAAC chr15:36177817-36178317 - 89 2.79e-06 . AGCCAGTAATTA TTTACTTTGT chr12:124551496-12455199 - 35 2.79e-06 AGAAACCTGA AGCCTGCAATTA AGTGAAACTC chr16:85626442-85626942 + 40 3.51e-06 CTCAGCTATT AGCTTGTAATTA CAGAGCACAG chr22:46967620-46968120 - 25 3.51e-06 ATGGAATCAT AGCTTGTAATTA CCAGGGGGTG chr22:38606511-38607011 - 43 3.51e-06 CCCCACCAGA AACCAGTAATTA CTAAGGTTGG chr19:38666780-38667280 + 61 3.51e-06 CTAATTCTTT AGCTTGTAATTA AGGTGCTCAT chr17:55067595-55068095 - 62 3.51e-06 CTCCTTACCT AACCAGTAATTA AGCACTGTGA chr15:99434989-99435489 - 46 3.51e-06 GGGCTGGCAC ACCCTGCAATTA CAGCTGCCGT chr17:33982009-33982509 + 34 3.51e-06 GTATTTATTT ACCCTGCAATTA CATGCTACAT chr17:14316199-14316699 - 22 3.51e-06 AGGAAAGCTG AACCTGCAATTA GCCTGCTTAC chr13:30108685-30109185 + 4 3.51e-06 TGG AAGCTATAATTA CCCGGTGTAT chr10:28678877-28679377 + 27 4.03e-06 TTTGGAAGGA AGGGTGTAATTA ACCCTAAATA chr6:112218463-112218963 + 17 4.03e-06 TCACTGTGAG AGCCTGTCATTA TCCACTTACC chr18:49006706-49007206 - 71 4.03e-06 CGCTCCGAGG AGGGTGTAATTA TTTTCAGTAA chr1:8896728-8897228 - 54 4.03e-06 TTGAAGTTGT AGGGTGTAATTA CACTGATGGG chr18:26233286-26233786 + 54 4.03e-06 ttgaagttgt agggtgtaatta tgctgatggg chr13:39159346-39159846 - 54 4.03e-06 ACAAGGAAAA ATCCTGTAATTA GATAGACGTG chr6:131816075-131816575 + 32 4.03e-06 tttggaatac aacttgtaatta gagatctgct chr9:36891464-36891964 - 20 4.74e-06 ATGGCTAATA AACCTGTCATTA GGAGCCTGCC chr5:43482601-43483101 - 48 4.74e-06 AATACATGAT AGCGTATAATTA AAGTGACCAG chr12:52580354-52580854 + 67 4.74e-06 GCTGTGCATT GGGCTGTAATTA AGCCACATCA chr5:73289270-73289770 - 42 5.92e-06 AATGCCAGAG AGCATATAATTA AGTGGTTCAG chr1:61254055-61254555 + 7 5.92e-06 AACTGT AGACTATAATTA TGTGTTAGCA chr10:8543701-8544201 + 12 5.92e-06 TTATAGGGTA GAGCTGTAATTA CCTCTGCTTT chr17:48547488-48547988 + 79 5.92e-06 TGTTGCATAA AGACTATAATTA CTAACCTTGG chr5:76709699-76710199 - 3 5.92e-06 CACAAACACT AACGTATAATTA TA chr10:110265463-11026596 + 40 5.92e-06 TCCTATAAGC AGCATATAATTA AGTGCTAAGT chr6:85110887-85111387 + 43 6.98e-06 CTCCTGCACA AACATATAATTA GGCTGTCTTA chr5:123807223-123807723 + 52 6.98e-06 CACTGTCAGC ACACTATAATTA ACATAGGGTG chr11:8768645-8769145 + 72 6.98e-06 TCTGTTCAGT GACCTATAATTA TACACTCAGG chr1:180424778-180425278 + 17 7.83e-06 ATTTTCACAT AATCTATAATTA TCTCTTCGCT chr5:6419336-6419836 + 87 7.83e-06 CGGAAGGAGA GGCGTGTAATTA CA chr12:95545685-95546185 + 13 7.83e-06 AGAGATCTAG AATCTATAATTA CCCTGATCTT chr19:33639015-33639515 + 77 9.33e-06 AAACACTGCA GACGTGTAATTA AGAGGAGTTA chr14:26394346-26394846 + 52 9.33e-06 TACTTATTCA AGTGTGTAATTA TTCACAGTTA chr20:57930394-57930894 + 64 9.33e-06 GACTGTTTGC AGTGTGTAATTA CCGCCATTAA chr7:29327444-29327944 + 39 9.33e-06 TAGCCAGAGA AGTGTGTAATTA GTGGTTGTGA chr20:11076300-11076800 - 77 9.33e-06 CCTGTAGATT ACAGTGTAATTA CACTGAGGAG chr12:57010781-57011281 + 6 1.18e-05 AAATT GCACTGTAATTA TCTTTATGGC chr10:63692437-63692937 + 80 1.18e-05 AATAAAGCCA ACCCTACAATTA GTGGTTTAG chr4:80307258-80307758 + 24 1.18e-05 TGCAACTTGA AGCCTCTAATTA CTTTGATTTA chr10:3852368-3852868 - 42 1.18e-05 TTACCTATAA AGCCTGTTATTA CCAAGGGTAC chr14:60650477-60650977 + 70 1.18e-05 CAAACAAGTG AAGTTGTAATTA TCTTAAGCCT chr2:149063145-149063645 + 38 1.18e-05 ATACTTATAT ACCCTACAATTA CATCGTCAAA chr10:4653115-4653615 + 44 1.18e-05 TAGGTTTTAC AACCAATAATTA AACGATTAGG chr1:164728675-164729175 - 89 1.18e-05 . ACCCTACAATTA TCTTGTGGTT chr14:76486239-76486739 + 12 1.40e-05 GTGGCCCCAG ATCCTATAATTA CATCTCCCTT chr10:132700552-13270105 - 55 1.40e-05 GTTTCTGCTG CGGCTGTAATTA TCTGAGACTG chr10:20891188-20891688 + 70 1.40e-05 GAGAGAAAAT AGCCTATCATTA GGCTTAAGTT chr12:29754718-29755218 + 73 1.40e-05 AAAAGTAAGG ACCTTATAATTA CTGAAAAATG chr7:91034901-91035401 - 17 1.40e-05 TTGATAAGGA AGGGTATAATTA GATGAAGGAG chr1:234534083-234534583 + 37 1.60e-05 GTAATCAAAT AACCTATCATTA ACATTTTCTA chr11:27796287-27796787 - 55 1.60e-05 CCTCCCTAAC TGCCTGTAATTA TCATCCAGCT chr6:2028597-2029097 + 64 1.60e-05 TTCCAGTTAA CAGCTGTAATTA CTGGTGTGAT chr14:99612293-99612793 - 63 1.60e-05 CTTGATGTAA ACCCCGTAATTA TAAGTAGCAT chr1:225409013-225409513 + 26 1.60e-05 GCGCAACAGG AACCCGTAATTA GCGGATAGCA chr1:86733286-86733786 + 39 1.60e-05 GAGGTAGTCA AACCTATCATTA TAATGATGAT chr6:108662603-108663103 + 29 1.60e-05 ATTACAGAAA GGCCAGTAATTA GGGGCCTTTC chr7:84675503-84676003 + 24 1.60e-05 TTAGTGACTA GGCCAGTAATTA AATCACCCTT chr16:52251431-52251931 - 27 1.60e-05 TTTTGCTGAA AGACTGCAATTA TAGCCTGCTT chr19:28289638-28290138 - 46 1.88e-05 GTTGTGACTG ACACAGTAATTA TGGGTTTTTG chr2:11254055-11254555 - 85 1.88e-05 CAGA AACATGCAATTA TATGCTGCAC chr9:37294199-37294699 + 55 1.88e-05 ATTATCTATA AACATGCAATTA TCTTATTTCA chr19:39138506-39139006 + 33 1.88e-05 CCCAGAAAGG AGGCTGTAATTT TCCTGAATGA chr12:93092121-93092621 + 82 1.88e-05 GTAGAAGCAA ACCATGCAATTA TATCCTT chr1:87642772-87643272 + 43 1.88e-05 CACTCACTGT AACATGCAATTA ACTCTCCTCT chr15:71455101-71455601 + 61 2.11e-05 tttactgaga agcctataattt tcgctttgac chr5:58925602-58926102 + 9 2.11e-05 atcctcct ggggtgtaatta tcccatgaaa chr1:57963568-57964068 + 83 2.11e-05 gcttctgtgc accgtgtcatta taagct chr4:156906310-156906810 + 41 2.11e-05 GTTTTTCACT ACATTGTAATTA AGAATTCCTG chr17:72069716-72070216 + 5 2.11e-05 CAAG GTCCTGTAATTA TAATCCATTG chr1:8027938-8028438 - 40 2.11e-05 TTGGTAAGGA ACTCTGCAATTA GTTGTGACTC chr6:70385885-70386385 + 65 2.11e-05 atttgggcat aagctgtaattt tgggatttgc chr19:28425292-28425792 - 69 2.35e-05 GACACAATTC AGCCTGTAATCA TCTCACAGTC chr15:70013551-70014051 + 81 2.35e-05 CTCATTTTCT AAACTGTCATTA AAAAGAAA chr1:14929401-14929901 + 10 2.35e-05 AGCACACCC AACATGTCATTA AACCCGGCCG chr17:48577409-48577909 + 81 2.35e-05 AAATTTATGG GGGATGTAATTA TGTGGCTC chr8:109637924-109638424 - 87 2.35e-05 TG AGGCAATAATTA CCCCCTTAGA chr5:124656128-124656628 - 89 2.69e-05 . AGGTTATAATTA ACGCAGATAG chr10:11539292-11539792 - 51 2.69e-05 CATATGCAAC AGCTAGTAATTA TGTTTCTCTT chr5:174503858-174504358 - 46 2.69e-05 ATACATTGCC CCACTGTAATTA TTCCAGACCC chr14:95460892-95461392 + 22 2.69e-05 TTCTCGTTAG ACCCAGCAATTA CACCATCTGC chr11:70483066-70483566 - 62 2.69e-05 CTCTATGTGG AAGCAATAATTA AAGAGGCCTT chr1:44485525-44486025 - 68 2.69e-05 TATGCTAACT CCCATGTAATTA CCCCAGCATC chr7:2408824-2409324 + 13 2.69e-05 tgaaaacaca aggctgttatta gttccaggga chr10:75703296-75703796 + 71 2.69e-05 TGTGATATAC AGCTTGCAATTA AGCATGGCTT chr5:116524464-116524964 - 89 2.69e-05 . CCCATGTAATTA TACACACATT chr15:78033770-78034270 + 15 2.69e-05 AGTCACCAGA AACCAGCAATTA TGCCTGTTTA chr12:1217507-1218007 - 84 3.14e-05 TTAGA AGGGAGTAATTA TACTGCTGGA chr17:48679343-48679843 - 16 3.14e-05 TGGTCATGAG AACTAGTAATTA GCATCACTTG chr7:100264542-100265042 + 1 3.14e-05 . ACCTAGTAATTA TTTTAAGTAC chr19:42468361-42468861 + 33 3.14e-05 CATCCGTAGG GAACTATAATTA CTTCTCTCCA chr10:121831732-12183223 - 59 3.14e-05 TCAGAAGCTA AGACTGTAATTT CTGTTTACTT chr7:127820246-127820746 - 67 3.14e-05 GCCCCTTGGA AAGCTGTGATTA ACTACACCAA chr15:70569777-70570277 - 54 3.14e-05 TGCCCGGCCT GAACTATAATTA TAAAGTCAAC chr14:89912703-89913203 + 63 3.14e-05 TTTTCCTGTT ACTGTATAATTA TGGAAAAGAA chr10:32950527-32951027 - 25 3.14e-05 TTCTTAGCCC AGGCTATCATTA TCATTGTGTG chr6:124076229-124076729 - 9 3.14e-05 GAGACCTTCA ATCCAGTAATTA TCTATGTC chr15:69194748-69195248 - 50 3.14e-05 AGTTCAACCT GAACTATAATTA GGTTTTTTTG chr10:74419545-74420045 + 76 3.14e-05 AGATAACCCC AGCATGTAATTT ACAATGATGT chr1:244347910-244348410 + 4 3.55e-05 TGT ACTATATAATTA TAACTAACAT chr16:80996622-80997122 + 1 3.55e-05 . ACCATGTAATTT TACTTCCATT chr10:15635744-15636244 - 85 3.55e-05 CCCT ACTATATAATTA TATCATGAAG chr17:71632290-71632790 + 86 3.55e-05 CATTATCAGA AAGGAGTAATTA GAG chr10:77177556-77178056 - 65 3.55e-05 AACACTACCC ACTATATAATTA AGCCCGTAAT chr20:20211405-20211905 - 54 3.55e-05 AATGTGGCAC AGTCTGTAATTT ATGTTTATTG chr5:14153731-14154231 + 38 3.55e-05 GTTGGTTTGG GCCCTGTAATTT AGTTTCTGTG chr9:136244268-136244768 + 76 3.55e-05 TGCCCACTGA AACATGTAATTT GAGGTTAGCA chr1:36299872-36300372 + 81 3.55e-05 AATTTGCCCT AGTCTGTAATTT CCCCTAGA chr6:31246018-31246518 - 62 3.55e-05 GTAATACTCT GCTCTATAATTA AAGTCAATAA chr10:20885550-20886050 + 18 3.98e-05 ATCAAGTGTT GGGTTGTAATTA TCTGCTTTTT chr3:11638866-11639366 + 52 3.98e-05 AATGGCTCTT AACCCATAATTA AAGTATCGCT chr17:76841948-76842448 - 60 3.98e-05 CTCCAAGCCT CAGCTATAATTA GAGAAATTAA chr10:8159665-8160165 - 53 3.98e-05 TAATGCCATA CAGCTATAATTA AGCTGTGCTA chr6:152272006-152272506 + 54 3.98e-05 GCAGCCAGAA GGAATGTAATTA TGGTAATTAC chr19:49212077-49212577 - 57 3.98e-05 TGTCAGTTCA ACCTTGTCATTA CCAGTTTAGC chr5:137516467-137516967 - 59 4.57e-05 CTCCTGAACT CGCCTGTCATTA TCCCTGCCCC chr1:26470555-26471055 + 81 4.57e-05 ataatGCAGA GCCCTACAATTA AGGCGGGA chr15:70200481-70200981 + 30 4.57e-05 TTCCGACTGG AACGTGTGATTA GAGAGATTAC chr7:130356155-130356655 + 70 4.57e-05 AAGCCTGACA GGGCTGTCATTA GGCATTCCTC chr1:67719335-67719835 - 17 4.57e-05 GGCACTAAAT AACATACAATTA ACCATTGAAA chr16:80982560-80983060 + 17 4.57e-05 ctgggctcag acactacaatta tccacttata chr5:67283851-67284351 - 13 4.57e-05 TAATCACACA AACGTGTGATTA TATCCACTAA chr6:16850855-16851355 + 20 4.57e-05 CTAATCACTA CTCCTGTAATTA CTAACCTGTT chr5:124908888-124909388 - 76 5.30e-05 ATTTGTTTGC ACACTGTTATTA GTCAAGACTC chr9:69090893-69091393 - 57 5.30e-05 GATAGGCGCA AACATCTAATTA GGAAAACCAA chr6:1630724-1631224 - 66 5.30e-05 TATTAACAGT AACCAGTAATTT CCGACCAACA chr12:104220042-10422054 - 43 5.30e-05 AAGCAAGATT ACTCTACAATTA TCTAGCGCAT chr22:29589968-29590468 + 38 5.30e-05 ATTTGGCCAG ACACTGTTATTA TAAACCACTT chr1:174035430-174035930 + 75 5.30e-05 ggagatagaa gacttataatta aataaccaca chr7:95897498-95897998 - 56 5.30e-05 CGCTACTGAA AGCATATCATTA TTGCAAAAAA chr20:47857903-47858403 + 70 5.30e-05 TTCAATAGCA ACCGCGTAATTA AGGTAGCATG chr19:13026443-13026943 + 6 5.96e-05 GCGGC ACTCTGTGATTA AGCAAGGCAG chr11:36577875-36578375 - 6 5.96e-05 AATTAACACT AACATATCATTA TGACT chr1:90831924-90832424 + 84 5.96e-05 TGTAGAAAAA GGACAGTAATTA ACGGT chr5:107570029-107570529 + 30 5.96e-05 CCAAACCCAT TGCATGTAATTA GCCTTGATTA chr7:29370458-29370958 + 52 5.96e-05 CACCAAGCAA AGTGTGCAATTA GAGAGATGTG chr1:41870097-41870597 + 68 6.71e-05 tctcttttca acgttgcaatta aataatcaca chr2:26342830-26343330 - 3 6.71e-05 AAAAGTATAG CACATATAATTA TG chr6:11270041-11270541 + 51 6.71e-05 AAGTAGTGAT TAACTGTAATTA AAGGGAGCTA chr17:46279646-46280146 - 29 6.71e-05 GAAAAACATA AGGCTATGATTA AGCCAAAGAA chr14:95256147-95256647 - 69 6.71e-05 TCAGTGTCAA GCACTGCAATTA TCTGTTGAGT chr4:118981222-118981722 - 67 6.71e-05 TCAGAAGAGA GGTCAGTAATTA TGGTAATTAC chr20:62088469-62088969 + 89 6.71e-05 agaagtctag cacatataatta chr5:57050695-57051195 - 54 6.71e-05 TTACGTGCAT AGGCTATGATTA GCAGTAAAGA chr15:67150050-67150550 + 27 6.71e-05 GGAAGTCAAA ACTGTGCAATTA ACACAAAACC chr17:78934174-78934674 + 65 6.71e-05 TTTCATTTCA AGGCTATGATTA GGTCTGTGCC chr9:126650661-126651161 - 11 6.71e-05 TGGGTTCTGC ACTCCGTAATTA TCCCTCTATG chr10:74418388-74418888 - 59 7.54e-05 TATCTGAGCT AACCTCCAATTA AAGTCAATCA chr6:42762324-42762824 - 37 7.54e-05 TCCCTCCAGG AACTTACAATTA AATACTTAGA chr10:15857274-15857774 - 54 7.54e-05 TTTAAAGAAT AGCATATAATTT TCACTTCCTT chr6:168165172-168165672 - 42 7.54e-05 CCTGCCATCC ACCCTTTAATTA AATTTGCTCT chr5:113099720-113100220 - 54 7.54e-05 AAGCCCACGC CACCTGTAATTT CCTGGGTTAC chr10:101974357-10197485 - 4 7.54e-05 CTCTTCTCTA AGGGTACAATTA ATG chr4:31089732-31090232 + 40 7.54e-05 ATGTAATTTG ACCTAATAATTA CCCTTAAAGA chr4:66577844-66578344 - 14 7.54e-05 CAAGAACACT GCATTGTAATTA AGTGATCAAA chr6:134109443-134109943 + 80 8.34e-05 cgttaagaga aatgtgtcatta ggcgatttc chr15:66145611-66146111 - 88 8.34e-05 C CGTGTGTAATTA TCTCATTTAA chr17:28926055-28926555 + 49 9.26e-05 AAAGTTGCTT GGTGTATAATTA GTGTGGGGAG chr5:119270071-119270571 + 65 9.26e-05 TCTTTAAGGA AAGAAATAATTA TCACGTTTGA chr5:174482454-174482954 + 40 9.26e-05 AAACTGAACA ATGGTATAATTA GAAGGCTCGC chr1:22342013-22342513 + 23 9.26e-05 TTCCTCCGGG AAACTGTAATCA GGGCCTCCCG chr7:123797993-123798493 - 62 9.26e-05 AACCACAACT GACCTGTAATCA CTTGACCTTA chr19:41225573-41226073 - 22 9.26e-05 AAACACACAG GGGCTGTTATTA GCACAGAAGA chr1:224067830-224068330 - 65 9.26e-05 TTCCTGCCCC AAACAGCAATTA CTTCATTTCC chr5:142360604-142361104 - 25 9.26e-05 TGGAAAAGAA AGGATCTAATTA AGCAGAGTAG chr8:42889486-42889986 - 60 1.04e-04 TTGAATGAAA ATACTGCAATTA GAGCTGTTTC chr8:28258815-28259315 - 67 1.04e-04 ATTCTGGGAA AGACTATGATTA CCCCCATTCA chr11:95524341-95524841 - 88 1.04e-04 A ATACAGTAATTA CCATGCCAGC chr5:116532651-116533151 + 44 1.04e-04 GCCAATTGTT AAGGTATCATTA ACAGGGACAC chr8:37360469-37360969 - 21 1.04e-04 TGTCATATAA ACAGTGTAATTT CAGCTGCAAT chr6:151191402-151191902 - 74 1.04e-04 ATCAACCTCA AACGTATTATTA AGTCAGAAGA chr6:42896127-42896627 + 19 1.15e-04 tggtacccat gccctattatta acatatactt chr6:87808196-87808696 + 25 1.15e-04 GAGATAAAAT GACATGTAATTT CATTGTGTGG chr1:230103527-230104027 + 13 1.15e-04 AAAAAAAAAA AGCACATAATTA TCATGTAGGC chr6:21264185-21264685 + 75 1.26e-04 ACGTGGGACA AACCTCTAATTT ACAAGCTAGC chr7:148772526-148773026 + 87 1.26e-04 gtaatctaat agggtataattt cc chr19:34269854-34270354 + 28 1.26e-04 TCAGGAAGCT AGGCAGTGATTA CTTTTGTTTC chr6:14824816-14825316 + 27 1.26e-04 ACTCCAAGCA AAACCATAATTA TGGGTGAGAA chr17:48492582-48493082 + 4 1.41e-04 CTG TAACTATAATTA GGCGGATTCA chr10:116961303-11696180 + 11 1.41e-04 ACATTTGAGT GGCATCTAATTA TGACTTGATG chr18:62445326-62445826 + 38 1.41e-04 AATTTTATTG AGTAAATAATTA TCTCTGTGGG chr5:68139561-68140061 + 76 1.41e-04 caactagtta accctatcattt tgcaaatggg chr22:24727041-24727541 - 77 1.41e-04 TTTAAAGGAG CTCATGTAATTA CAAATGACTC chr10:95288903-95289403 - 81 1.41e-04 GTTCTTTG TGTCTATAATTA ACCTGTCAGC chr19:38269880-38270380 + 49 1.41e-04 AGACTCCACA GACGTGTTATTA GTTGCCACCC chr2:128228811-128229311 - 43 1.41e-04 AGAGTATAAT GGCATGTGATTA TACTGAATAT chr20:10924662-10925162 - 19 1.41e-04 GCAAAGCAGA AAGGTATAATTT TATAGTGTTT chr10:35821503-35822003 + 71 1.41e-04 AAAACTATAA AACTAGCAATTA ATTTTGGTCT chr4:25500971-25501471 - 33 1.41e-04 TTCTGTAGCT CTACTGTAATTA GACCTGGTTC chr4:128393141-128393641 - 71 1.57e-04 CTACACTCTA CCTTTGTAATTA GCACGTTTGG chr15:70833724-70834224 + 37 1.57e-04 TTATACTGTA AAACAGTAATTT TCTAGAGGCC chr10:75283756-75284256 - 80 1.57e-04 TGTAAGCGA GCTCAATAATTA GCAGTCCTGA chr17:30263824-30264324 - 21 1.57e-04 GAGAGCGCAT AGTATGTTATTA TGTTGGCAAT chr6:131400291-131400791 + 11 1.57e-04 gttaaatgat aaccagccatta tcccctagat chr3:181623819-181624319 - 53 1.57e-04 GTGCAGAGGA AAGGAGCAATTA GCTGGGGGCT chr6:150766142-150766642 + 34 1.57e-04 GGCGCAGAAT GAACTGTTATTA TCACTGAGCT chr21:38273694-38274194 - 5 1.57e-04 AGTTTTAGAA GAGCTATAATTT AGTA chr10:117967076-11796757 - 51 1.73e-04 CCTTTTGAGA GACATATCATTA GCCATTATTT chr5:41794431-41794931 + 29 1.73e-04 AACATGAGGG GCTCTGTTATTA CATACCCTCT chr8:122994459-122994959 - 83 1.73e-04 TTGTTT CCCCAGCAATTA CAGTGCTTGA chr17:1905342-1905842 - 31 1.73e-04 CAAGGATGTC GCTCTCTAATTA AGAGGGCTCT chr15:83061708-83062208 + 75 1.91e-04 ATTATCTGAA GAGTAGTAATTA AGTGTGGAGC chr12:14756693-14757193 - 35 1.91e-04 ATTCCCAGTC ACTATATCATTA TCTACTCAGA chr8:37392903-37393403 + 29 1.91e-04 CTGTCTCCAT GCAAAGTAATTA AATTAGATTT chr20:50366643-50367143 + 70 1.91e-04 AGAAGCCAGA AACATATAATCA AAGCCATTAA chr20:20215977-20216477 + 44 2.12e-04 GAGGCGCCAG ATGGTGTCATTA ACACGAACAC chr5:92552215-92552715 + 89 2.12e-04 TAGCCACAGG AAGCAATAATTT chr5:174337787-174338287 + 26 2.12e-04 TCTTCCCGGC AAGCTGTAGTTA AGAGGTGCTA chr5:81171715-81172215 - 51 2.12e-04 TCCTGTTGGT TCTATGTAATTA TCAGCCCTCC chr10:59606445-59606945 - 17 2.12e-04 TGCTACTGAA AGGTTATAATTT TCAGCTCTCA chr2:39492136-39492636 - 19 2.12e-04 ATCACTTCTT CCCCTATGATTA AAGCCTGACA chr14:36835070-36835570 - 48 2.33e-04 GGGCAGAGAG AGGGAGTAATTT GTTAATGTCA chr1:59214670-59215170 + 20 2.33e-04 CAAACACACA GAAATGTCATTA AGGCAACAAA chr17:43671274-43671774 + 16 2.33e-04 aaggtatttc aaagagcaatta tagtaggcat chr22:43275481-43275981 + 53 2.33e-04 acacataccg aggttgtaatca gtaaagggca chr10:104331416-10433191 - 26 2.33e-04 AAAATACAAA GCCCCGCAATTA TCAAATGACT chr15:72994824-72995324 + 47 2.33e-04 GAAACATGAT TAGGTATAATTA CGTATAATCT chr1:183026269-183026769 - 89 2.33e-04 . GGGAAATAATTA GTTAGCTACA chr16:29943926-29944426 - 81 2.33e-04 CTCAGGTT ACAGTGTAATCA TCTACCCAGT chr2:31008524-31009024 - 74 2.52e-04 GGTGTCGACT GCACTGTAATCA CACAATTATT chr16:25049587-25050087 + 21 2.52e-04 aaaagtgtaa cacatacaatta tgtacaatac chr6:41767073-41767573 + 38 2.52e-04 ccctagccca agccaccaatta acttcatggc chr19:33473588-33474088 + 64 2.52e-04 TTTGTGGGGA AGAGTATGATTA TAGAGGAATT chr2:25009924-25010424 - 49 2.52e-04 CAGACGCGGC AACATCTCATTA ACACTTAGCT chr1:234619693-234620193 + 59 2.75e-04 GGTCATAAGG AACTAACAATTA ACCAGAAATA chr15:65533001-65533501 - 55 2.75e-04 CAACACCCAA ATCCTATAATCA GTTCTAACAC chr17:44820567-44821067 - 89 2.75e-04 . AGCTAGTTATTA AACATCTATT chr6:123841154-123841654 + 41 2.75e-04 TGTTTTCAAG GCATAGTAATTA AATATGGAGA chr1:201721123-201721623 + 55 2.75e-04 AACTTATAAT CCCCAGTAATTT AATGTAAACA chr12:31749224-31749724 + 89 2.75e-04 actcctgagc aataagcaatta chr2:224678238-224678738 - 75 2.75e-04 TCACTCATGC AGCTAGTGATTA ACTGACAATT chr12:12398134-12398634 + 80 2.75e-04 AAAAATAATT AATATGTAATCA AAGCCATGT chr8:37594595-37595095 - 15 2.75e-04 TTGATAGATG ACAGTATTATTA ATGGTGATTT chr20:46085118-46085618 - 55 3.01e-04 ACTTTAGATT GTATTGTAATTA TCTGTGTACT chr6:15735640-15736140 + 37 3.01e-04 tgataaatgc atgctattatta gcacagcagg chr6:168147158-168147658 - 12 3.01e-04 CAAAGCAATC ACAATATTATTA GATCATTCTC chr1:68331126-68331626 + 61 3.01e-04 GTGGGTGGCT GCACAGTCATTA TTCATCAGTG chr20:25252770-25253270 - 88 3.01e-04 A CCCTTGTAATTT CCTAAGTGAT chr6:3419765-3420265 + 28 3.01e-04 aatgaaaagc atcctttAATTA AGCTTGTTAA chr13:41774554-41775054 + 23 3.01e-04 AAAAAAGAAA AGGCCCTAATTA GAAGGAATAA chr19:32373683-32374183 - 12 3.01e-04 CCGACAGCAA AACATGTAGTTA TGCTGCATCC chr1:84845303-84845803 - 81 3.01e-04 GGATAAGA AACATACAATTT TTTCACTGCA chr16:29714943-29715443 - 38 3.01e-04 TGTATTTTCT ACCTAGTTATTA CACATCAAAG chr7:70356162-70356662 - 25 3.01e-04 TAGGCAATAA AATGTATTATTA AATAATTAGT chr17:65228849-65229349 + 30 3.28e-04 TGGTTTGCCA AACCACTCATTA TACCCCTCCC chr4:154165045-154165545 - 43 3.28e-04 ATCAGTGGAG GGCTAGCAATTA GGCCAACTCA chr15:67106646-67107146 - 33 3.28e-04 GGTAATAAAT ACTATGCCATTA CCACCATTAA chr21:37370678-37371178 - 28 3.28e-04 ATATATACAT AAGGTGCTATTA CACTGGTCAC chr15:67720496-67720996 + 29 3.56e-04 TGACCATAAC TTCCAGTAATTA GTGTATTTTA chr8:123026067-123026567 - 24 3.56e-04 AAAAGAAGCA CAGCTATTATTA AAATCGGGAA chr12:105979959-10598045 + 16 3.56e-04 CAGAGATGGG GCTCCATAATTA CCTTCAGTGG chr1:37862304-37862804 + 55 3.56e-04 caaacatcat agcgtgtactta aactttcaca chr1:214439402-214439902 + 44 3.56e-04 GCAACATGTC CCGCTATGATTA CGCCTCCTCT chr1:89719661-89720161 + 44 3.86e-04 GCTAGGAGGC CTCCTCTAATTA ACCACATTCA chr1:11178257-11178757 - 54 3.86e-04 AAGATAAAGT TGGAAGTAATTA ACTGGCTGAC chr17:4788342-4788842 + 86 3.86e-04 gcttgcaaag tacctattatta tcc chr10:121310106-12131060 + 77 4.17e-04 TGTAACTGAG AAACCACAATTA TCCTTTTGAG chr17:34981753-34982253 - 65 4.17e-04 CACACAGCAA GAGCTCTCATTA ACGTCAGCTC chr3:128735236-128735736 + 75 4.17e-04 AATGGCTTTG ATGTTGTAATTT GTCTAAAGAA chr8:37703250-37703750 + 19 4.17e-04 GATTATCCAA ATACAGTCATTA AAGGGGAAAT chr15:76954743-76955243 - 46 4.17e-04 CCATGAAGGG AGTCCACAATTA ACTTCAATCA chr10:76115393-76115893 + 36 4.17e-04 GAGAGAGCAG ACCATCTGATTA AGCCCCTCTG chr15:84753855-84754355 - 24 4.53e-04 AAAAGGATCA AATGTGTCATTT CAACAAACAC chr10:68462517-68463017 - 41 4.53e-04 TGACACTGTA AGGTAGTTATTA TCTCCTCCTT chr5:123814042-123814542 - 77 4.53e-04 AGCAAATACT AATTTATGATTA CCTGTCACAT chr1:183060417-183060917 + 9 4.53e-04 acatgtct gactcataatta tcattacatt chr6:75605589-75606089 - 36 4.53e-04 TTTTAATCTT GCCCCCTAATTA ATTCCACAAA chr18:31011380-31011880 - 67 4.53e-04 AAAATCAAAC ACTGTATAATCA TGGTGTTCAA chr1:233241743-233242243 - 32 4.94e-04 CTAAAGCCAC AATGTTTAATTA TCTACCTGGT chr7:6077051-6077551 - 30 4.94e-04 GAACTTGACA AGGGTATCATTT CCCAAACTCT chr6:124488038-124488538 + 79 4.94e-04 GGGCTGTAAA TTACTATAATTA AATTAAGCCA chr1:64923118-64923618 + 69 4.94e-04 ATTACACAAT GCCATTTAATTA GAATTGTGCA chr12:25333744-25334244 - 88 4.94e-04 C CCTGTGTAATTT ATGGATTGAC chr5:83097806-83098306 + 64 5.35e-04 TTATCACTGA AACTAATGATTA TTAATGGTAT chr5:88516256-88516756 + 86 5.35e-04 ATATATTTTG TAAGTGCAATTA CTC chr7:101880997-101881497 + 3 5.35e-04 GC TCACCGTAATTA AAAAATGCCT chr1:94081873-94082373 + 36 5.35e-04 CAGTGAGTCA TGCCTATAATCA CCATCTATGC chr1:90834832-90835332 + 68 5.35e-04 ACTGGTCATT ATCCAGCCATTA TTTTAGTTGA chr10:17059243-17059743 + 30 5.35e-04 GATTTATGTG ACTATCCAATTA CATTGAGGCT chr1:210236432-210236932 + 20 5.35e-04 AACATTACAA GCTGTATAATTT GGAAAAGAAA chr17:45247416-45247916 + 46 5.35e-04 CTTTCGCCCT ACCCAGTACTTA GTGACGCCAT chr5:174514877-174515377 + 70 5.74e-04 TCATTGGAGA CACTTGTAATCA TGTTTTATTA chr8:37302607-37303107 + 17 5.74e-04 TGGAACATGC AATAAATCATTA GAATGCCAAT chr15:50810098-50810598 + 24 5.74e-04 TAGAATAAGA ACTCTATAGTTA GTGGGTTATA chr1:58779939-58780439 - 81 5.74e-04 ACCAAGAG CCAGTGTGATTA TCAGGCAGCA chr5:96745722-96746222 - 4 5.74e-04 GTGCAGCAGT TAGTTGCAATTA TTT chr1:205495384-205495884 - 63 6.19e-04 CTGGCTCCAC ACTATCTCATTA GCCAGGGTGC chr7:133492161-133492661 + 49 6.69e-04 GGGTAAAGAT AGCATTTCATTA TGTATGCTTT chr16:80066853-80067353 + 18 7.17e-04 GCCTCTCCAG GTACTATAATTT AGGACTTAAA chr7:70134049-70134549 - 70 8.22e-04 CAGAGATGCT AACGTGCTATTT ACTGAATTCC chr10:87845952-87846452 + 41 1.22e-03 gttgttgaca gaaacgtcatta tgtcacgcaa chr5:14264660-14265160 + 76 1.46e-03 AATGAGTAAA ATTCGGTAATTA CCACTAAGAC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVCCTRTAATTA MEME-1 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr6:165846054-165846554 8.8e-08 43_[+1]_45 chr4:25484208-25484708 2.9e-07 47_[-1]_41 chr11:116232342-11623284 2.9e-07 79_[+1]_9 chr6:31714106-31714606 2.9e-07 76_[+1]_12 chr5:76838479-76838979 2.9e-07 11_[+1]_77 chr10:71262002-71262502 3.7e-07 20_[+1]_68 chr10:14467894-14468394 3.7e-07 56_[+1]_32 chr19:511157-511657 3.7e-07 18_[+1]_70 chr6:57472811-57473311 6.8e-07 25_[-1]_63 chr1:113021587-113022087 6.8e-07 65_[+1]_23 chr20:47264359-47264859 6.8e-07 13_[+1]_75 chr15:70713864-70714364 9.3e-07 15_[+1]_73 chr2:12296833-12297333 1.5e-06 19_[+1]_69 chr7:101728152-101728652 1.5e-06 64_[-1]_24 chr10:74691117-74691617 2.3e-06 17_[-1]_71 chr5:174410517-174411017 2.3e-06 37_[-1]_51 chr14:95517417-95517917 2.3e-06 11_[-1]_77 chr2:149657404-149657904 2.3e-06 [+1]_88 chr17:2611592-2612092 2.3e-06 46_[-1]_42 chr4:95531085-95531585 2.3e-06 14_[-1]_74 chr17:80671142-80671642 2.5e-06 24_[+1]_64 chr20:36466972-36467472 2.5e-06 37_[+1]_51 chr5:43422083-43422583 2.5e-06 29_[+1]_59 chr12:108822738-10882323 2.8e-06 38_[+1]_50 chr15:36177817-36178317 2.8e-06 88_[-1] chr12:124551496-12455199 2.8e-06 34_[-1]_54 chr16:85626442-85626942 3.5e-06 39_[+1]_49 chr22:46967620-46968120 3.5e-06 24_[-1]_64 chr22:38606511-38607011 3.5e-06 42_[-1]_46 chr19:38666780-38667280 3.5e-06 60_[+1]_28 chr17:55067595-55068095 3.5e-06 61_[-1]_27 chr15:99434989-99435489 3.5e-06 45_[-1]_43 chr17:33982009-33982509 3.5e-06 33_[+1]_55 chr17:14316199-14316699 3.5e-06 21_[-1]_67 chr13:30108685-30109185 3.5e-06 3_[+1]_85 chr10:28678877-28679377 4e-06 26_[+1]_62 chr6:112218463-112218963 4e-06 16_[+1]_72 chr18:49006706-49007206 4e-06 70_[-1]_18 chr1:8896728-8897228 4e-06 53_[-1]_35 chr18:26233286-26233786 4e-06 53_[+1]_35 chr13:39159346-39159846 4e-06 53_[-1]_35 chr6:131816075-131816575 4e-06 31_[+1]_57 chr9:36891464-36891964 4.7e-06 19_[-1]_69 chr5:43482601-43483101 4.7e-06 47_[-1]_41 chr12:52580354-52580854 4.7e-06 66_[+1]_22 chr5:73289270-73289770 5.9e-06 41_[-1]_47 chr1:61254055-61254555 5.9e-06 6_[+1]_82 chr10:8543701-8544201 5.9e-06 11_[+1]_77 chr17:48547488-48547988 5.9e-06 78_[+1]_10 chr5:76709699-76710199 5.9e-06 2_[-1]_86 chr10:110265463-11026596 5.9e-06 39_[+1]_49 chr6:85110887-85111387 7e-06 42_[+1]_46 chr5:123807223-123807723 7e-06 51_[+1]_37 chr11:8768645-8769145 7e-06 71_[+1]_17 chr1:180424778-180425278 7.8e-06 16_[+1]_72 chr5:6419336-6419836 7.8e-06 86_[+1]_2 chr12:95545685-95546185 7.8e-06 12_[+1]_76 chr19:33639015-33639515 9.3e-06 76_[+1]_12 chr14:26394346-26394846 9.3e-06 51_[+1]_37 chr20:57930394-57930894 9.3e-06 63_[+1]_25 chr7:29327444-29327944 9.3e-06 38_[+1]_50 chr20:11076300-11076800 9.3e-06 76_[-1]_12 chr12:57010781-57011281 1.2e-05 5_[+1]_83 chr10:63692437-63692937 1.2e-05 79_[+1]_9 chr4:80307258-80307758 1.2e-05 23_[+1]_65 chr10:3852368-3852868 1.2e-05 41_[-1]_47 chr14:60650477-60650977 1.2e-05 69_[+1]_19 chr2:149063145-149063645 1.2e-05 37_[+1]_51 chr10:4653115-4653615 1.2e-05 43_[+1]_45 chr1:164728675-164729175 1.2e-05 88_[-1] chr14:76486239-76486739 1.4e-05 11_[+1]_77 chr10:132700552-13270105 1.4e-05 54_[-1]_34 chr10:20891188-20891688 1.4e-05 69_[+1]_19 chr12:29754718-29755218 1.4e-05 72_[+1]_16 chr7:91034901-91035401 1.4e-05 16_[-1]_72 chr1:234534083-234534583 1.6e-05 36_[+1]_52 chr11:27796287-27796787 1.6e-05 54_[-1]_34 chr6:2028597-2029097 1.6e-05 63_[+1]_25 chr14:99612293-99612793 1.6e-05 62_[-1]_26 chr1:225409013-225409513 1.6e-05 25_[+1]_63 chr1:86733286-86733786 1.6e-05 38_[+1]_50 chr6:108662603-108663103 1.6e-05 28_[+1]_60 chr7:84675503-84676003 1.6e-05 23_[+1]_65 chr16:52251431-52251931 1.6e-05 26_[-1]_62 chr19:28289638-28290138 1.9e-05 45_[-1]_43 chr2:11254055-11254555 1.9e-05 84_[-1]_4 chr9:37294199-37294699 1.9e-05 54_[+1]_34 chr19:39138506-39139006 1.9e-05 32_[+1]_56 chr12:93092121-93092621 1.9e-05 81_[+1]_7 chr1:87642772-87643272 1.9e-05 42_[+1]_46 chr15:71455101-71455601 2.1e-05 60_[+1]_28 chr5:58925602-58926102 2.1e-05 8_[+1]_80 chr1:57963568-57964068 2.1e-05 82_[+1]_6 chr4:156906310-156906810 2.1e-05 40_[+1]_48 chr17:72069716-72070216 2.1e-05 4_[+1]_84 chr1:8027938-8028438 2.1e-05 39_[-1]_49 chr6:70385885-70386385 2.1e-05 64_[+1]_24 chr19:28425292-28425792 2.4e-05 68_[-1]_20 chr15:70013551-70014051 2.4e-05 80_[+1]_8 chr1:14929401-14929901 2.4e-05 9_[+1]_79 chr17:48577409-48577909 2.4e-05 80_[+1]_8 chr8:109637924-109638424 2.4e-05 86_[-1]_2 chr5:124656128-124656628 2.7e-05 88_[-1] chr10:11539292-11539792 2.7e-05 50_[-1]_38 chr5:174503858-174504358 2.7e-05 45_[-1]_43 chr14:95460892-95461392 2.7e-05 21_[+1]_67 chr11:70483066-70483566 2.7e-05 61_[-1]_27 chr1:44485525-44486025 2.7e-05 67_[-1]_21 chr7:2408824-2409324 2.7e-05 12_[+1]_76 chr10:75703296-75703796 2.7e-05 70_[+1]_18 chr5:116524464-116524964 2.7e-05 88_[-1] chr15:78033770-78034270 2.7e-05 14_[+1]_74 chr12:1217507-1218007 3.1e-05 83_[-1]_5 chr17:48679343-48679843 3.1e-05 15_[-1]_73 chr7:100264542-100265042 3.1e-05 [+1]_88 chr19:42468361-42468861 3.1e-05 32_[+1]_56 chr10:121831732-12183223 3.1e-05 58_[-1]_30 chr7:127820246-127820746 3.1e-05 66_[-1]_22 chr15:70569777-70570277 3.1e-05 53_[-1]_35 chr14:89912703-89913203 3.1e-05 62_[+1]_26 chr10:32950527-32951027 3.1e-05 24_[-1]_64 chr6:124076229-124076729 3.1e-05 8_[-1]_80 chr15:69194748-69195248 3.1e-05 49_[-1]_39 chr10:74419545-74420045 3.1e-05 75_[+1]_13 chr1:244347910-244348410 3.5e-05 3_[+1]_85 chr16:80996622-80997122 3.5e-05 [+1]_88 chr10:15635744-15636244 3.5e-05 84_[-1]_4 chr17:71632290-71632790 3.5e-05 85_[+1]_3 chr10:77177556-77178056 3.5e-05 64_[-1]_24 chr20:20211405-20211905 3.5e-05 53_[-1]_35 chr5:14153731-14154231 3.5e-05 37_[+1]_51 chr9:136244268-136244768 3.5e-05 75_[+1]_13 chr1:36299872-36300372 3.5e-05 80_[+1]_8 chr6:31246018-31246518 3.5e-05 61_[-1]_27 chr10:20885550-20886050 4e-05 17_[+1]_71 chr3:11638866-11639366 4e-05 51_[+1]_37 chr17:76841948-76842448 4e-05 59_[-1]_29 chr10:8159665-8160165 4e-05 52_[-1]_36 chr6:152272006-152272506 4e-05 53_[+1]_35 chr19:49212077-49212577 4e-05 56_[-1]_32 chr5:137516467-137516967 4.6e-05 58_[-1]_30 chr1:26470555-26471055 4.6e-05 80_[+1]_8 chr15:70200481-70200981 4.6e-05 29_[+1]_59 chr7:130356155-130356655 4.6e-05 69_[+1]_19 chr1:67719335-67719835 4.6e-05 16_[-1]_72 chr16:80982560-80983060 4.6e-05 16_[+1]_72 chr5:67283851-67284351 4.6e-05 12_[-1]_76 chr6:16850855-16851355 4.6e-05 19_[+1]_69 chr5:124908888-124909388 5.3e-05 75_[-1]_13 chr9:69090893-69091393 5.3e-05 56_[-1]_32 chr6:1630724-1631224 5.3e-05 65_[-1]_23 chr12:104220042-10422054 5.3e-05 42_[-1]_46 chr22:29589968-29590468 5.3e-05 37_[+1]_51 chr1:174035430-174035930 5.3e-05 74_[+1]_14 chr7:95897498-95897998 5.3e-05 55_[-1]_33 chr20:47857903-47858403 5.3e-05 69_[+1]_19 chr19:13026443-13026943 6e-05 5_[+1]_83 chr11:36577875-36578375 6e-05 5_[-1]_83 chr1:90831924-90832424 6e-05 83_[+1]_5 chr5:107570029-107570529 6e-05 29_[+1]_59 chr7:29370458-29370958 6e-05 51_[+1]_37 chr1:41870097-41870597 6.7e-05 67_[+1]_21 chr2:26342830-26343330 6.7e-05 2_[-1]_86 chr6:11270041-11270541 6.7e-05 50_[+1]_38 chr17:46279646-46280146 6.7e-05 28_[-1]_60 chr14:95256147-95256647 6.7e-05 68_[-1]_20 chr4:118981222-118981722 6.7e-05 66_[-1]_22 chr20:62088469-62088969 6.7e-05 88_[+1] chr5:57050695-57051195 6.7e-05 53_[-1]_35 chr15:67150050-67150550 6.7e-05 26_[+1]_62 chr17:78934174-78934674 6.7e-05 64_[+1]_24 chr9:126650661-126651161 6.7e-05 10_[-1]_78 chr10:74418388-74418888 7.5e-05 58_[-1]_30 chr6:42762324-42762824 7.5e-05 36_[-1]_52 chr10:15857274-15857774 7.5e-05 53_[-1]_35 chr6:168165172-168165672 7.5e-05 41_[-1]_47 chr5:113099720-113100220 7.5e-05 53_[-1]_35 chr10:101974357-10197485 7.5e-05 3_[-1]_85 chr4:31089732-31090232 7.5e-05 39_[+1]_49 chr4:66577844-66578344 7.5e-05 13_[-1]_75 chr6:134109443-134109943 8.3e-05 79_[+1]_9 chr15:66145611-66146111 8.3e-05 87_[-1]_1 chr17:28926055-28926555 9.3e-05 48_[+1]_40 chr5:119270071-119270571 9.3e-05 64_[+1]_24 chr5:174482454-174482954 9.3e-05 39_[+1]_49 chr1:22342013-22342513 9.3e-05 22_[+1]_66 chr7:123797993-123798493 9.3e-05 61_[-1]_27 chr19:41225573-41226073 9.3e-05 21_[-1]_67 chr1:224067830-224068330 9.3e-05 64_[-1]_24 chr5:142360604-142361104 9.3e-05 24_[-1]_64 chr8:42889486-42889986 0.0001 59_[-1]_29 chr8:28258815-28259315 0.0001 66_[-1]_22 chr11:95524341-95524841 0.0001 87_[-1]_1 chr5:116532651-116533151 0.0001 43_[+1]_45 chr8:37360469-37360969 0.0001 20_[-1]_68 chr6:151191402-151191902 0.0001 73_[-1]_15 chr6:42896127-42896627 0.00011 18_[+1]_70 chr6:87808196-87808696 0.00011 24_[+1]_64 chr1:230103527-230104027 0.00011 12_[+1]_76 chr6:21264185-21264685 0.00013 74_[+1]_14 chr7:148772526-148773026 0.00013 86_[+1]_2 chr19:34269854-34270354 0.00013 27_[+1]_61 chr6:14824816-14825316 0.00013 26_[+1]_62 chr17:48492582-48493082 0.00014 3_[+1]_85 chr10:116961303-11696180 0.00014 10_[+1]_78 chr18:62445326-62445826 0.00014 37_[+1]_51 chr5:68139561-68140061 0.00014 75_[+1]_13 chr22:24727041-24727541 0.00014 76_[-1]_12 chr10:95288903-95289403 0.00014 80_[-1]_8 chr19:38269880-38270380 0.00014 48_[+1]_40 chr2:128228811-128229311 0.00014 42_[-1]_46 chr20:10924662-10925162 0.00014 18_[-1]_70 chr10:35821503-35822003 0.00014 70_[+1]_18 chr4:25500971-25501471 0.00014 32_[-1]_56 chr4:128393141-128393641 0.00016 70_[-1]_18 chr15:70833724-70834224 0.00016 36_[+1]_52 chr10:75283756-75284256 0.00016 79_[-1]_9 chr17:30263824-30264324 0.00016 20_[-1]_68 chr6:131400291-131400791 0.00016 10_[+1]_78 chr3:181623819-181624319 0.00016 52_[-1]_36 chr6:150766142-150766642 0.00016 33_[+1]_55 chr21:38273694-38274194 0.00016 4_[-1]_84 chr10:117967076-11796757 0.00017 50_[-1]_38 chr5:41794431-41794931 0.00017 28_[+1]_60 chr8:122994459-122994959 0.00017 82_[-1]_6 chr17:1905342-1905842 0.00017 30_[-1]_58 chr15:83061708-83062208 0.00019 74_[+1]_14 chr12:14756693-14757193 0.00019 34_[-1]_54 chr8:37392903-37393403 0.00019 28_[+1]_60 chr20:50366643-50367143 0.00019 69_[+1]_19 chr20:20215977-20216477 0.00021 43_[+1]_45 chr5:92552215-92552715 0.00021 88_[+1] chr5:174337787-174338287 0.00021 25_[+1]_63 chr5:81171715-81172215 0.00021 50_[-1]_38 chr10:59606445-59606945 0.00021 16_[-1]_72 chr2:39492136-39492636 0.00021 18_[-1]_70 chr14:36835070-36835570 0.00023 47_[-1]_41 chr1:59214670-59215170 0.00023 19_[+1]_69 chr17:43671274-43671774 0.00023 15_[+1]_73 chr22:43275481-43275981 0.00023 52_[+1]_36 chr10:104331416-10433191 0.00023 25_[-1]_63 chr15:72994824-72995324 0.00023 46_[+1]_42 chr1:183026269-183026769 0.00023 88_[-1] chr16:29943926-29944426 0.00023 80_[-1]_8 chr2:31008524-31009024 0.00025 73_[-1]_15 chr16:25049587-25050087 0.00025 20_[+1]_68 chr6:41767073-41767573 0.00025 37_[+1]_51 chr19:33473588-33474088 0.00025 63_[+1]_25 chr2:25009924-25010424 0.00025 48_[-1]_40 chr1:234619693-234620193 0.00028 58_[+1]_30 chr15:65533001-65533501 0.00028 54_[-1]_34 chr17:44820567-44821067 0.00028 88_[-1] chr6:123841154-123841654 0.00028 40_[+1]_48 chr1:201721123-201721623 0.00028 54_[+1]_34 chr12:31749224-31749724 0.00028 88_[+1] chr2:224678238-224678738 0.00028 74_[-1]_14 chr12:12398134-12398634 0.00028 79_[+1]_9 chr8:37594595-37595095 0.00028 14_[-1]_74 chr20:46085118-46085618 0.0003 54_[-1]_34 chr6:15735640-15736140 0.0003 36_[+1]_52 chr6:168147158-168147658 0.0003 11_[-1]_77 chr1:68331126-68331626 0.0003 60_[+1]_28 chr20:25252770-25253270 0.0003 87_[-1]_1 chr6:3419765-3420265 0.0003 27_[+1]_61 chr13:41774554-41775054 0.0003 22_[+1]_66 chr19:32373683-32374183 0.0003 11_[-1]_77 chr1:84845303-84845803 0.0003 80_[-1]_8 chr16:29714943-29715443 0.0003 37_[-1]_51 chr7:70356162-70356662 0.0003 24_[-1]_64 chr17:65228849-65229349 0.00033 29_[+1]_59 chr4:154165045-154165545 0.00033 42_[-1]_46 chr15:67106646-67107146 0.00033 32_[-1]_56 chr21:37370678-37371178 0.00033 27_[-1]_61 chr15:67720496-67720996 0.00036 28_[+1]_60 chr8:123026067-123026567 0.00036 23_[-1]_65 chr12:105979959-10598045 0.00036 15_[+1]_73 chr1:37862304-37862804 0.00036 54_[+1]_34 chr1:214439402-214439902 0.00036 43_[+1]_45 chr1:89719661-89720161 0.00039 43_[+1]_45 chr1:11178257-11178757 0.00039 53_[-1]_35 chr17:4788342-4788842 0.00039 85_[+1]_3 chr10:121310106-12131060 0.00042 76_[+1]_12 chr17:34981753-34982253 0.00042 64_[-1]_24 chr3:128735236-128735736 0.00042 74_[+1]_14 chr8:37703250-37703750 0.00042 18_[+1]_70 chr15:76954743-76955243 0.00042 45_[-1]_43 chr10:76115393-76115893 0.00042 35_[+1]_53 chr15:84753855-84754355 0.00045 23_[-1]_65 chr10:68462517-68463017 0.00045 40_[-1]_48 chr5:123814042-123814542 0.00045 76_[-1]_12 chr1:183060417-183060917 0.00045 8_[+1]_80 chr6:75605589-75606089 0.00045 35_[-1]_53 chr18:31011380-31011880 0.00045 66_[-1]_22 chr1:233241743-233242243 0.00049 31_[-1]_57 chr7:6077051-6077551 0.00049 29_[-1]_59 chr6:124488038-124488538 0.00049 78_[+1]_10 chr1:64923118-64923618 0.00049 68_[+1]_20 chr12:25333744-25334244 0.00049 87_[-1]_1 chr5:83097806-83098306 0.00053 63_[+1]_25 chr5:88516256-88516756 0.00053 85_[+1]_3 chr7:101880997-101881497 0.00053 2_[+1]_86 chr1:94081873-94082373 0.00053 35_[+1]_53 chr1:90834832-90835332 0.00053 67_[+1]_21 chr10:17059243-17059743 0.00053 29_[+1]_59 chr1:210236432-210236932 0.00053 19_[+1]_69 chr17:45247416-45247916 0.00053 45_[+1]_43 chr5:174514877-174515377 0.00057 69_[+1]_19 chr8:37302607-37303107 0.00057 16_[+1]_72 chr15:50810098-50810598 0.00057 23_[+1]_65 chr1:58779939-58780439 0.00057 80_[-1]_8 chr5:96745722-96746222 0.00057 3_[-1]_85 chr1:205495384-205495884 0.00062 62_[-1]_26 chr7:133492161-133492661 0.00067 48_[+1]_40 chr16:80066853-80067353 0.00072 17_[+1]_71 chr7:70134049-70134549 0.00082 69_[-1]_19 chr10:87845952-87846452 0.0012 40_[+1]_48 chr5:14264660-14265160 0.0015 75_[+1]_13 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVCCTRTAATTA MEME-1 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF AVCCTRTAATTA width=12 seqs=317 chr6:165846054-165846554 ( 44) AGCCTGTAATTA 1 chr4:25484208-25484708 ( 48) AACCTGTAATTA 1 chr11:116232342-11623284 ( 80) ACCCTGTAATTA 1 chr6:31714106-31714606 ( 77) ACCCTGTAATTA 1 chr5:76838479-76838979 ( 12) AACCTGTAATTA 1 chr10:71262002-71262502 ( 21) AGGCTGTAATTA 1 chr10:14467894-14468394 ( 57) AGGCTGTAATTA 1 chr19:511157-511657 ( 19) AGGCTGTAATTA 1 chr6:57472811-57473311 ( 26) AAGCTGTAATTA 1 chr1:113021587-113022087 ( 66) AAGCTGTAATTA 1 chr20:47264359-47264859 ( 14) AGCCTATAATTA 1 chr15:70713864-70714364 ( 16) ACCCTATAATTA 1 chr2:12296833-12297333 ( 20) AGCATGTAATTA 1 chr7:101728152-101728652 ( 65) AACGTGTAATTA 1 chr10:74691117-74691617 ( 18) ACCATGTAATTA 1 chr5:174410517-174411017 ( 38) ACACTGTAATTA 1 chr14:95517417-95517917 ( 12) ACCATGTAATTA 1 chr2:149657404-149657904 ( 1) AAACTGTAATTA 1 chr17:2611592-2612092 ( 47) ACACTGTAATTA 1 chr4:95531085-95531585 ( 15) GACCTGTAATTA 1 chr17:80671142-80671642 ( 25) ACTCTGTAATTA 1 chr20:36466972-36467472 ( 38) ACTCTGTAATTA 1 chr5:43422083-43422583 ( 30) ACTCTGTAATTA 1 chr12:108822738-10882323 ( 39) AGCCTGCAATTA 1 chr15:36177817-36178317 ( 89) AGCCAGTAATTA 1 chr12:124551496-12455199 ( 35) AGCCTGCAATTA 1 chr16:85626442-85626942 ( 40) AGCTTGTAATTA 1 chr22:46967620-46968120 ( 25) AGCTTGTAATTA 1 chr22:38606511-38607011 ( 43) AACCAGTAATTA 1 chr19:38666780-38667280 ( 61) AGCTTGTAATTA 1 chr17:55067595-55068095 ( 62) AACCAGTAATTA 1 chr15:99434989-99435489 ( 46) ACCCTGCAATTA 1 chr17:33982009-33982509 ( 34) ACCCTGCAATTA 1 chr17:14316199-14316699 ( 22) AACCTGCAATTA 1 chr13:30108685-30109185 ( 4) AAGCTATAATTA 1 chr10:28678877-28679377 ( 27) AGGGTGTAATTA 1 chr6:112218463-112218963 ( 17) AGCCTGTCATTA 1 chr18:49006706-49007206 ( 71) AGGGTGTAATTA 1 chr1:8896728-8897228 ( 54) AGGGTGTAATTA 1 chr18:26233286-26233786 ( 54) AGGGTGTAATTA 1 chr13:39159346-39159846 ( 54) ATCCTGTAATTA 1 chr6:131816075-131816575 ( 32) AACTTGTAATTA 1 chr9:36891464-36891964 ( 20) AACCTGTCATTA 1 chr5:43482601-43483101 ( 48) AGCGTATAATTA 1 chr12:52580354-52580854 ( 67) GGGCTGTAATTA 1 chr5:73289270-73289770 ( 42) AGCATATAATTA 1 chr1:61254055-61254555 ( 7) AGACTATAATTA 1 chr10:8543701-8544201 ( 12) GAGCTGTAATTA 1 chr17:48547488-48547988 ( 79) AGACTATAATTA 1 chr5:76709699-76710199 ( 3) AACGTATAATTA 1 chr10:110265463-11026596 ( 40) AGCATATAATTA 1 chr6:85110887-85111387 ( 43) AACATATAATTA 1 chr5:123807223-123807723 ( 52) ACACTATAATTA 1 chr11:8768645-8769145 ( 72) GACCTATAATTA 1 chr1:180424778-180425278 ( 17) AATCTATAATTA 1 chr5:6419336-6419836 ( 87) GGCGTGTAATTA 1 chr12:95545685-95546185 ( 13) AATCTATAATTA 1 chr19:33639015-33639515 ( 77) GACGTGTAATTA 1 chr14:26394346-26394846 ( 52) AGTGTGTAATTA 1 chr20:57930394-57930894 ( 64) AGTGTGTAATTA 1 chr7:29327444-29327944 ( 39) AGTGTGTAATTA 1 chr20:11076300-11076800 ( 77) ACAGTGTAATTA 1 chr12:57010781-57011281 ( 6) GCACTGTAATTA 1 chr10:63692437-63692937 ( 80) ACCCTACAATTA 1 chr4:80307258-80307758 ( 24) AGCCTCTAATTA 1 chr10:3852368-3852868 ( 42) AGCCTGTTATTA 1 chr14:60650477-60650977 ( 70) AAGTTGTAATTA 1 chr2:149063145-149063645 ( 38) ACCCTACAATTA 1 chr10:4653115-4653615 ( 44) AACCAATAATTA 1 chr1:164728675-164729175 ( 89) ACCCTACAATTA 1 chr14:76486239-76486739 ( 12) ATCCTATAATTA 1 chr10:132700552-13270105 ( 55) CGGCTGTAATTA 1 chr10:20891188-20891688 ( 70) AGCCTATCATTA 1 chr12:29754718-29755218 ( 73) ACCTTATAATTA 1 chr7:91034901-91035401 ( 17) AGGGTATAATTA 1 chr1:234534083-234534583 ( 37) AACCTATCATTA 1 chr11:27796287-27796787 ( 55) TGCCTGTAATTA 1 chr6:2028597-2029097 ( 64) CAGCTGTAATTA 1 chr14:99612293-99612793 ( 63) ACCCCGTAATTA 1 chr1:225409013-225409513 ( 26) AACCCGTAATTA 1 chr1:86733286-86733786 ( 39) AACCTATCATTA 1 chr6:108662603-108663103 ( 29) GGCCAGTAATTA 1 chr7:84675503-84676003 ( 24) GGCCAGTAATTA 1 chr16:52251431-52251931 ( 27) AGACTGCAATTA 1 chr19:28289638-28290138 ( 46) ACACAGTAATTA 1 chr2:11254055-11254555 ( 85) AACATGCAATTA 1 chr9:37294199-37294699 ( 55) AACATGCAATTA 1 chr19:39138506-39139006 ( 33) AGGCTGTAATTT 1 chr12:93092121-93092621 ( 82) ACCATGCAATTA 1 chr1:87642772-87643272 ( 43) AACATGCAATTA 1 chr15:71455101-71455601 ( 61) AGCCTATAATTT 1 chr5:58925602-58926102 ( 9) GGGGTGTAATTA 1 chr1:57963568-57964068 ( 83) ACCGTGTCATTA 1 chr4:156906310-156906810 ( 41) ACATTGTAATTA 1 chr17:72069716-72070216 ( 5) GTCCTGTAATTA 1 chr1:8027938-8028438 ( 40) ACTCTGCAATTA 1 chr6:70385885-70386385 ( 65) AAGCTGTAATTT 1 chr19:28425292-28425792 ( 69) AGCCTGTAATCA 1 chr15:70013551-70014051 ( 81) AAACTGTCATTA 1 chr1:14929401-14929901 ( 10) AACATGTCATTA 1 chr17:48577409-48577909 ( 81) GGGATGTAATTA 1 chr8:109637924-109638424 ( 87) AGGCAATAATTA 1 chr5:124656128-124656628 ( 89) AGGTTATAATTA 1 chr10:11539292-11539792 ( 51) AGCTAGTAATTA 1 chr5:174503858-174504358 ( 46) CCACTGTAATTA 1 chr14:95460892-95461392 ( 22) ACCCAGCAATTA 1 chr11:70483066-70483566 ( 62) AAGCAATAATTA 1 chr1:44485525-44486025 ( 68) CCCATGTAATTA 1 chr7:2408824-2409324 ( 13) AGGCTGTTATTA 1 chr10:75703296-75703796 ( 71) AGCTTGCAATTA 1 chr5:116524464-116524964 ( 89) CCCATGTAATTA 1 chr15:78033770-78034270 ( 15) AACCAGCAATTA 1 chr12:1217507-1218007 ( 84) AGGGAGTAATTA 1 chr17:48679343-48679843 ( 16) AACTAGTAATTA 1 chr7:100264542-100265042 ( 1) ACCTAGTAATTA 1 chr19:42468361-42468861 ( 33) GAACTATAATTA 1 chr10:121831732-12183223 ( 59) AGACTGTAATTT 1 chr7:127820246-127820746 ( 67) AAGCTGTGATTA 1 chr15:70569777-70570277 ( 54) GAACTATAATTA 1 chr14:89912703-89913203 ( 63) ACTGTATAATTA 1 chr10:32950527-32951027 ( 25) AGGCTATCATTA 1 chr6:124076229-124076729 ( 9) ATCCAGTAATTA 1 chr15:69194748-69195248 ( 50) GAACTATAATTA 1 chr10:74419545-74420045 ( 76) AGCATGTAATTT 1 chr1:244347910-244348410 ( 4) ACTATATAATTA 1 chr16:80996622-80997122 ( 1) ACCATGTAATTT 1 chr10:15635744-15636244 ( 85) ACTATATAATTA 1 chr17:71632290-71632790 ( 86) AAGGAGTAATTA 1 chr10:77177556-77178056 ( 65) ACTATATAATTA 1 chr20:20211405-20211905 ( 54) AGTCTGTAATTT 1 chr5:14153731-14154231 ( 38) GCCCTGTAATTT 1 chr9:136244268-136244768 ( 76) AACATGTAATTT 1 chr1:36299872-36300372 ( 81) AGTCTGTAATTT 1 chr6:31246018-31246518 ( 62) GCTCTATAATTA 1 chr10:20885550-20886050 ( 18) GGGTTGTAATTA 1 chr3:11638866-11639366 ( 52) AACCCATAATTA 1 chr17:76841948-76842448 ( 60) CAGCTATAATTA 1 chr10:8159665-8160165 ( 53) CAGCTATAATTA 1 chr6:152272006-152272506 ( 54) GGAATGTAATTA 1 chr19:49212077-49212577 ( 57) ACCTTGTCATTA 1 chr5:137516467-137516967 ( 59) CGCCTGTCATTA 1 chr1:26470555-26471055 ( 81) GCCCTACAATTA 1 chr15:70200481-70200981 ( 30) AACGTGTGATTA 1 chr7:130356155-130356655 ( 70) GGGCTGTCATTA 1 chr1:67719335-67719835 ( 17) AACATACAATTA 1 chr16:80982560-80983060 ( 17) ACACTACAATTA 1 chr5:67283851-67284351 ( 13) AACGTGTGATTA 1 chr6:16850855-16851355 ( 20) CTCCTGTAATTA 1 chr5:124908888-124909388 ( 76) ACACTGTTATTA 1 chr9:69090893-69091393 ( 57) AACATCTAATTA 1 chr6:1630724-1631224 ( 66) AACCAGTAATTT 1 chr12:104220042-10422054 ( 43) ACTCTACAATTA 1 chr22:29589968-29590468 ( 38) ACACTGTTATTA 1 chr1:174035430-174035930 ( 75) GACTTATAATTA 1 chr7:95897498-95897998 ( 56) AGCATATCATTA 1 chr20:47857903-47858403 ( 70) ACCGCGTAATTA 1 chr19:13026443-13026943 ( 6) ACTCTGTGATTA 1 chr11:36577875-36578375 ( 6) AACATATCATTA 1 chr1:90831924-90832424 ( 84) GGACAGTAATTA 1 chr5:107570029-107570529 ( 30) TGCATGTAATTA 1 chr7:29370458-29370958 ( 52) AGTGTGCAATTA 1 chr1:41870097-41870597 ( 68) ACGTTGCAATTA 1 chr2:26342830-26343330 ( 3) CACATATAATTA 1 chr6:11270041-11270541 ( 51) TAACTGTAATTA 1 chr17:46279646-46280146 ( 29) AGGCTATGATTA 1 chr14:95256147-95256647 ( 69) GCACTGCAATTA 1 chr4:118981222-118981722 ( 67) GGTCAGTAATTA 1 chr20:62088469-62088969 ( 89) CACATATAATTA 1 chr5:57050695-57051195 ( 54) AGGCTATGATTA 1 chr15:67150050-67150550 ( 27) ACTGTGCAATTA 1 chr17:78934174-78934674 ( 65) AGGCTATGATTA 1 chr9:126650661-126651161 ( 11) ACTCCGTAATTA 1 chr10:74418388-74418888 ( 59) AACCTCCAATTA 1 chr6:42762324-42762824 ( 37) AACTTACAATTA 1 chr10:15857274-15857774 ( 54) AGCATATAATTT 1 chr6:168165172-168165672 ( 42) ACCCTTTAATTA 1 chr5:113099720-113100220 ( 54) CACCTGTAATTT 1 chr10:101974357-10197485 ( 4) AGGGTACAATTA 1 chr4:31089732-31090232 ( 40) ACCTAATAATTA 1 chr4:66577844-66578344 ( 14) GCATTGTAATTA 1 chr6:134109443-134109943 ( 80) AATGTGTCATTA 1 chr15:66145611-66146111 ( 88) CGTGTGTAATTA 1 chr17:28926055-28926555 ( 49) GGTGTATAATTA 1 chr5:119270071-119270571 ( 65) AAGAAATAATTA 1 chr5:174482454-174482954 ( 40) ATGGTATAATTA 1 chr1:22342013-22342513 ( 23) AAACTGTAATCA 1 chr7:123797993-123798493 ( 62) GACCTGTAATCA 1 chr19:41225573-41226073 ( 22) GGGCTGTTATTA 1 chr1:224067830-224068330 ( 65) AAACAGCAATTA 1 chr5:142360604-142361104 ( 25) AGGATCTAATTA 1 chr8:42889486-42889986 ( 60) ATACTGCAATTA 1 chr8:28258815-28259315 ( 67) AGACTATGATTA 1 chr11:95524341-95524841 ( 88) ATACAGTAATTA 1 chr5:116532651-116533151 ( 44) AAGGTATCATTA 1 chr8:37360469-37360969 ( 21) ACAGTGTAATTT 1 chr6:151191402-151191902 ( 74) AACGTATTATTA 1 chr6:42896127-42896627 ( 19) GCCCTATTATTA 1 chr6:87808196-87808696 ( 25) GACATGTAATTT 1 chr1:230103527-230104027 ( 13) AGCACATAATTA 1 chr6:21264185-21264685 ( 75) AACCTCTAATTT 1 chr7:148772526-148773026 ( 87) AGGGTATAATTT 1 chr19:34269854-34270354 ( 28) AGGCAGTGATTA 1 chr6:14824816-14825316 ( 27) AAACCATAATTA 1 chr17:48492582-48493082 ( 4) TAACTATAATTA 1 chr10:116961303-11696180 ( 11) GGCATCTAATTA 1 chr18:62445326-62445826 ( 38) AGTAAATAATTA 1 chr5:68139561-68140061 ( 76) ACCCTATCATTT 1 chr22:24727041-24727541 ( 77) CTCATGTAATTA 1 chr10:95288903-95289403 ( 81) TGTCTATAATTA 1 chr19:38269880-38270380 ( 49) GACGTGTTATTA 1 chr2:128228811-128229311 ( 43) GGCATGTGATTA 1 chr20:10924662-10925162 ( 19) AAGGTATAATTT 1 chr10:35821503-35822003 ( 71) AACTAGCAATTA 1 chr4:25500971-25501471 ( 33) CTACTGTAATTA 1 chr4:128393141-128393641 ( 71) CCTTTGTAATTA 1 chr15:70833724-70834224 ( 37) AAACAGTAATTT 1 chr10:75283756-75284256 ( 80) GCTCAATAATTA 1 chr17:30263824-30264324 ( 21) AGTATGTTATTA 1 chr6:131400291-131400791 ( 11) AACCAGCCATTA 1 chr3:181623819-181624319 ( 53) AAGGAGCAATTA 1 chr6:150766142-150766642 ( 34) GAACTGTTATTA 1 chr21:38273694-38274194 ( 5) GAGCTATAATTT 1 chr10:117967076-11796757 ( 51) GACATATCATTA 1 chr5:41794431-41794931 ( 29) GCTCTGTTATTA 1 chr8:122994459-122994959 ( 83) CCCCAGCAATTA 1 chr17:1905342-1905842 ( 31) GCTCTCTAATTA 1 chr15:83061708-83062208 ( 75) GAGTAGTAATTA 1 chr12:14756693-14757193 ( 35) ACTATATCATTA 1 chr8:37392903-37393403 ( 29) GCAAAGTAATTA 1 chr20:50366643-50367143 ( 70) AACATATAATCA 1 chr20:20215977-20216477 ( 44) ATGGTGTCATTA 1 chr5:92552215-92552715 ( 89) AAGCAATAATTT 1 chr5:174337787-174338287 ( 26) AAGCTGTAGTTA 1 chr5:81171715-81172215 ( 51) TCTATGTAATTA 1 chr10:59606445-59606945 ( 17) AGGTTATAATTT 1 chr2:39492136-39492636 ( 19) CCCCTATGATTA 1 chr14:36835070-36835570 ( 48) AGGGAGTAATTT 1 chr1:59214670-59215170 ( 20) GAAATGTCATTA 1 chr17:43671274-43671774 ( 16) AAAGAGCAATTA 1 chr22:43275481-43275981 ( 53) AGGTTGTAATCA 1 chr10:104331416-10433191 ( 26) GCCCCGCAATTA 1 chr15:72994824-72995324 ( 47) TAGGTATAATTA 1 chr1:183026269-183026769 ( 89) GGGAAATAATTA 1 chr16:29943926-29944426 ( 81) ACAGTGTAATCA 1 chr2:31008524-31009024 ( 74) GCACTGTAATCA 1 chr16:25049587-25050087 ( 21) CACATACAATTA 1 chr6:41767073-41767573 ( 38) AGCCACCAATTA 1 chr19:33473588-33474088 ( 64) AGAGTATGATTA 1 chr2:25009924-25010424 ( 49) AACATCTCATTA 1 chr1:234619693-234620193 ( 59) AACTAACAATTA 1 chr15:65533001-65533501 ( 55) ATCCTATAATCA 1 chr17:44820567-44821067 ( 89) AGCTAGTTATTA 1 chr6:123841154-123841654 ( 41) GCATAGTAATTA 1 chr1:201721123-201721623 ( 55) CCCCAGTAATTT 1 chr12:31749224-31749724 ( 89) AATAAGCAATTA 1 chr2:224678238-224678738 ( 75) AGCTAGTGATTA 1 chr12:12398134-12398634 ( 80) AATATGTAATCA 1 chr8:37594595-37595095 ( 15) ACAGTATTATTA 1 chr20:46085118-46085618 ( 55) GTATTGTAATTA 1 chr6:15735640-15736140 ( 37) ATGCTATTATTA 1 chr6:168147158-168147658 ( 12) ACAATATTATTA 1 chr1:68331126-68331626 ( 61) GCACAGTCATTA 1 chr20:25252770-25253270 ( 88) CCCTTGTAATTT 1 chr6:3419765-3420265 ( 28) ATCCTTTAATTA 1 chr13:41774554-41775054 ( 23) AGGCCCTAATTA 1 chr19:32373683-32374183 ( 12) AACATGTAGTTA 1 chr1:84845303-84845803 ( 81) AACATACAATTT 1 chr16:29714943-29715443 ( 38) ACCTAGTTATTA 1 chr7:70356162-70356662 ( 25) AATGTATTATTA 1 chr17:65228849-65229349 ( 30) AACCACTCATTA 1 chr4:154165045-154165545 ( 43) GGCTAGCAATTA 1 chr15:67106646-67107146 ( 33) ACTATGCCATTA 1 chr21:37370678-37371178 ( 28) AAGGTGCTATTA 1 chr15:67720496-67720996 ( 29) TTCCAGTAATTA 1 chr8:123026067-123026567 ( 24) CAGCTATTATTA 1 chr12:105979959-10598045 ( 16) GCTCCATAATTA 1 chr1:37862304-37862804 ( 55) AGCGTGTACTTA 1 chr1:214439402-214439902 ( 44) CCGCTATGATTA 1 chr1:89719661-89720161 ( 44) CTCCTCTAATTA 1 chr1:11178257-11178757 ( 54) TGGAAGTAATTA 1 chr17:4788342-4788842 ( 86) TACCTATTATTA 1 chr10:121310106-12131060 ( 77) AAACCACAATTA 1 chr17:34981753-34982253 ( 65) GAGCTCTCATTA 1 chr3:128735236-128735736 ( 75) ATGTTGTAATTT 1 chr8:37703250-37703750 ( 19) ATACAGTCATTA 1 chr15:76954743-76955243 ( 46) AGTCCACAATTA 1 chr10:76115393-76115893 ( 36) ACCATCTGATTA 1 chr15:84753855-84754355 ( 24) AATGTGTCATTT 1 chr10:68462517-68463017 ( 41) AGGTAGTTATTA 1 chr5:123814042-123814542 ( 77) AATTTATGATTA 1 chr1:183060417-183060917 ( 9) GACTCATAATTA 1 chr6:75605589-75606089 ( 36) GCCCCCTAATTA 1 chr18:31011380-31011880 ( 67) ACTGTATAATCA 1 chr1:233241743-233242243 ( 32) AATGTTTAATTA 1 chr7:6077051-6077551 ( 30) AGGGTATCATTT 1 chr6:124488038-124488538 ( 79) TTACTATAATTA 1 chr1:64923118-64923618 ( 69) GCCATTTAATTA 1 chr12:25333744-25334244 ( 88) CCTGTGTAATTT 1 chr5:83097806-83098306 ( 64) AACTAATGATTA 1 chr5:88516256-88516756 ( 86) TAAGTGCAATTA 1 chr7:101880997-101881497 ( 3) TCACCGTAATTA 1 chr1:94081873-94082373 ( 36) TGCCTATAATCA 1 chr1:90834832-90835332 ( 68) ATCCAGCCATTA 1 chr10:17059243-17059743 ( 30) ACTATCCAATTA 1 chr1:210236432-210236932 ( 20) GCTGTATAATTT 1 chr17:45247416-45247916 ( 46) ACCCAGTACTTA 1 chr5:174514877-174515377 ( 70) CACTTGTAATCA 1 chr8:37302607-37303107 ( 17) AATAAATCATTA 1 chr15:50810098-50810598 ( 24) ACTCTATAGTTA 1 chr1:58779939-58780439 ( 81) CCAGTGTGATTA 1 chr5:96745722-96746222 ( 4) TAGTTGCAATTA 1 chr1:205495384-205495884 ( 63) ACTATCTCATTA 1 chr7:133492161-133492661 ( 49) AGCATTTCATTA 1 chr16:80066853-80067353 ( 18) GTACTATAATTT 1 chr7:70134049-70134549 ( 70) AACGTGCTATTT 1 chr10:87845952-87846452 ( 41) GAAACGTCATTA 1 chr5:14264660-14265160 ( 76) ATTCGGTAATTA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVCCTRTAATTA MEME-1 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 8.86099 E= 2.3e-156 129 -137 -27 -256 30 35 46 -194 -69 104 -6 -80 -54 121 -35 -118 -64 -213 -613 146 27 -204 143 -415 -1495 -46 -1495 159 145 -100 -196 -201 182 -513 -454 -1495 -1495 -1495 -1495 184 -1495 -254 -1495 178 168 -1495 -1495 -138 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVCCTRTAATTA MEME-1 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 317 E= 2.3e-156 0.684543 0.085174 0.182965 0.047319 0.343849 0.280757 0.302839 0.072555 0.173502 0.454259 0.211356 0.160883 0.192429 0.511041 0.173502 0.123028 0.179811 0.050473 0.003155 0.766562 0.337539 0.053628 0.593060 0.015773 0.000000 0.160883 0.000000 0.839117 0.763407 0.110410 0.056782 0.069401 0.984227 0.006309 0.009464 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.037855 0.000000 0.962145 0.892744 0.000000 0.000000 0.107256 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif AVCCTRTAATTA MEME-1 regular expression -------------------------------------------------------------------------------- A[AGC][CG]CT[GA]TAATTA -------------------------------------------------------------------------------- Time 420.36 secs. ******************************************************************************** ******************************************************************************** MOTIF CACRCACACACACACACACACACACACACVC MEME-2 width = 31 sites = 17 llr = 399 E-value = 1.3e-041 ******************************************************************************** -------------------------------------------------------------------------------- Motif CACRCACACACACACACACACACACACACVC MEME-2 Description -------------------------------------------------------------------------------- Simplified A :61517:61717:7:618:8181816:6141 pos.-specific C 91819191919:919:8:a1916:8:8:828 probability G :21411:1:::21::1:::2::3:1222141 matrix T 11:1:112:2:1121212:::2:212:21:1 bits 2.2 * 2.0 * 1.7 * * * * 1.5 * * * * * * * * * * Relative 1.3 * * * * * * * * * * * * Entropy 1.1 * * * * * * * * *** * ** * (33.9 bits) 0.9 * * * * * * *** ********* * * * 0.7 * * *** ***************** * * * 0.4 ******* *********************** 0.2 ******************************* 0.0 ------------------------------- Multilevel CACACACACACACACACACACACACACACAC consensus G T T T G T T G sequence C -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACRCACACACACACACACACACACACACVC MEME-2 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------- chr12:57111970-57112470 + 54 2.80e-19 cacaacacca cacacacacacacacacacacacacacacac acacacacaG chr5:125550184-125550684 - 69 6.26e-19 A CACACACACACACACACACACACACACACCC TTTTATGTCA chr12:1924525-1925025 - 69 6.26e-19 A CACACACACACACACACACACACACACACCC TCTAACAAGT chr10:63692437-63692937 + 14 1.01e-17 ctctctctTa cacacacacacacacgcacacacacacacac acaGAGAGCT chr3:136802543-136803043 - 45 7.39e-16 CTCTCTCTCT CACACACACACAGACACACACACACACTCAC TCACTTACAC chr3:194134804-194135304 + 30 1.76e-15 ccccggGGCG CGCGcacacacactcactcacacacgcacgc acacacacaT chr10:101442039-10144253 - 51 2.71e-15 TTATCTCATT TACACACACACACACACACACACATACACAC AGAGACAGAG chr9:69090893-69091393 - 70 4.64e-12 . CAAACACACACACACATACACAGATAGGCGC AAACATCTAA chr10:101830525-10183102 + 32 5.18e-11 AGGCGTGCGG CACGCCTCCCCATACACACACACACGCGCGC GGGCCTGGGG chr19:41225573-41226073 - 46 7.69e-11 ACAGCAAACC CCCCCACACACACACTCACAATGAATCACAC TTAAACACAC chr20:53611384-53611884 + 2 1.65e-10 a cacacacacacacacacaccacCTCTGGCCT CTTAAGTGTT chr1:155244568-155245068 - 50 8.39e-10 CTCTCTCTCG CTCGCTCTCTCGCTCTCTCGCTCTCTCTCGC TCGCTCTCTC chr1:234723889-234724389 - 8 2.35e-09 CCCTCCATTT CTCTCTCTCTCTCTCTCTCACACACACATCT CTACTCC chr16:12120453-12120953 - 8 2.50e-09 CTCCAGTCCC CAGGGACCCAAACATAAACACAGACACACAG CCAGATG chr15:74546119-74546619 - 62 1.49e-08 GCACTTTC TAGGAACGACCGCACACACGCAGACGCTGGC CAGCTGCCAA chr12:54359103-54359603 - 52 2.05e-08 CTTGCTCGTT CGCACGCTCTCTCTCTTTCGCTGTCTCTTAC AGGCAGATTT chr5:14264660-14265160 - 15 6.76e-08 GGGGAAACTT CGCGCGCGCACGCCTGCACACAAAGAGAAGA GTGATAAATC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACRCACACACACACACACACACACACACVC MEME-2 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr12:57111970-57112470 2.8e-19 53_[+2]_16 chr5:125550184-125550684 6.3e-19 68_[-2]_1 chr12:1924525-1925025 6.3e-19 68_[-2]_1 chr10:63692437-63692937 1e-17 13_[+2]_56 chr3:136802543-136803043 7.4e-16 44_[-2]_25 chr3:194134804-194135304 1.8e-15 29_[+2]_40 chr10:101442039-10144253 2.7e-15 50_[-2]_19 chr9:69090893-69091393 4.6e-12 69_[-2] chr10:101830525-10183102 5.2e-11 31_[+2]_38 chr19:41225573-41226073 7.7e-11 45_[-2]_24 chr20:53611384-53611884 1.7e-10 1_[+2]_68 chr1:155244568-155245068 8.4e-10 49_[-2]_20 chr1:234723889-234724389 2.4e-09 7_[-2]_62 chr16:12120453-12120953 2.5e-09 7_[-2]_62 chr15:74546119-74546619 1.5e-08 61_[-2]_8 chr12:54359103-54359603 2.1e-08 51_[-2]_18 chr5:14264660-14265160 6.8e-08 14_[-2]_55 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACRCACACACACACACACACACACACACVC MEME-2 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CACRCACACACACACACACACACACACACVC width=31 seqs=17 chr12:57111970-57112470 ( 54) CACACACACACACACACACACACACACACAC 1 chr5:125550184-125550684 ( 69) CACACACACACACACACACACACACACACCC 1 chr12:1924525-1925025 ( 69) CACACACACACACACACACACACACACACCC 1 chr10:63692437-63692937 ( 14) CACACACACACACACGCACACACACACACAC 1 chr3:136802543-136803043 ( 45) CACACACACACAGACACACACACACACTCAC 1 chr3:194134804-194135304 ( 30) CGCGCACACACACTCACTCACACACGCACGC 1 chr10:101442039-10144253 ( 51) TACACACACACACACACACACACATACACAC 1 chr9:69090893-69091393 ( 70) CAAACACACACACACATACACAGATAGGCGC 1 chr10:101830525-10183102 ( 32) CACGCCTCCCCATACACACACACACGCGCGC 1 chr19:41225573-41226073 ( 46) CCCCCACACACACACTCACAATGAATCACAC 1 chr20:53611384-53611884 ( 2) CACACACACACACACACACCACCTCTGGCCT 1 chr1:155244568-155245068 ( 50) CTCGCTCTCTCGCTCTCTCGCTCTCTCTCGC 1 chr1:234723889-234724389 ( 8) CTCTCTCTCTCTCTCTCTCACACACACATCT 1 chr16:12120453-12120953 ( 8) CAGGGACCCAAACATAAACACAGACACACAG 1 chr15:74546119-74546619 ( 62) TAGGAACGACCGCACACACGCAGACGCTGGC 1 chr12:54359103-54359603 ( 52) CGCACGCTCTCTCTCTTTCGCTGTCTCTTAC 1 chr5:14264660-14265160 ( 15) CGCGCGCGCACGCCTGCACACAAAGAGAAGA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACRCACACACACACACACACACACACACVC MEME-2 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 31 n= 42000 bayes= 12.6354 E= 1.3e-041 -1073 200 -1073 -125 121 -191 -32 -125 -224 190 -91 -1073 92 -191 68 -224 -224 200 -191 -1073 134 -191 -91 -125 -1073 209 -1073 -224 107 -91 -91 -66 -224 209 -1073 -1073 134 -91 -1073 -66 -224 209 -1073 -1073 134 -1073 -32 -125 -1073 200 -191 -224 134 -191 -1073 -25 -1073 200 -1073 -125 121 -1073 -91 -25 -224 190 -1073 -125 145 -1073 -1073 -25 -1073 218 -1073 -1073 145 -191 -32 -1073 -125 200 -1073 -1073 145 -191 -1073 -66 -224 155 41 -1073 156 -1073 -1073 -66 -224 179 -191 -125 107 -1073 -32 -25 -1073 190 -32 -1073 107 -1073 -32 -25 -224 179 -191 -125 56 9 68 -1073 -224 179 -191 -125 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACRCACACACACACACACACACACACACVC MEME-2 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 31 nsites= 17 E= 1.3e-041 0.000000 0.882353 0.000000 0.117647 0.647059 0.058824 0.176471 0.117647 0.058824 0.823529 0.117647 0.000000 0.529412 0.058824 0.352941 0.058824 0.058824 0.882353 0.058824 0.000000 0.705882 0.058824 0.117647 0.117647 0.000000 0.941176 0.000000 0.058824 0.588235 0.117647 0.117647 0.176471 0.058824 0.941176 0.000000 0.000000 0.705882 0.117647 0.000000 0.176471 0.058824 0.941176 0.000000 0.000000 0.705882 0.000000 0.176471 0.117647 0.000000 0.882353 0.058824 0.058824 0.705882 0.058824 0.000000 0.235294 0.000000 0.882353 0.000000 0.117647 0.647059 0.000000 0.117647 0.235294 0.058824 0.823529 0.000000 0.117647 0.764706 0.000000 0.000000 0.235294 0.000000 1.000000 0.000000 0.000000 0.764706 0.058824 0.176471 0.000000 0.117647 0.882353 0.000000 0.000000 0.764706 0.058824 0.000000 0.176471 0.058824 0.647059 0.294118 0.000000 0.823529 0.000000 0.000000 0.176471 0.058824 0.764706 0.058824 0.117647 0.588235 0.000000 0.176471 0.235294 0.000000 0.823529 0.176471 0.000000 0.588235 0.000000 0.176471 0.235294 0.058824 0.764706 0.058824 0.117647 0.411765 0.235294 0.352941 0.000000 0.058824 0.764706 0.058824 0.117647 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CACRCACACACACACACACACACACACACVC MEME-2 regular expression -------------------------------------------------------------------------------- CAC[AG]CACACACAC[AT]C[AT]C[AT]CACA[CG]AC[AT]C[AT]C[AGC]C -------------------------------------------------------------------------------- Time 773.27 secs. ******************************************************************************** ******************************************************************************** MOTIF TGAGTCABY MEME-3 width = 9 sites = 71 llr = 712 E-value = 4.0e-033 ******************************************************************************** -------------------------------------------------------------------------------- Motif TGAGTCABY MEME-3 Description -------------------------------------------------------------------------------- Simplified A ::a:::a:1 pos.-specific C :::::a:45 probability G :a:a:::21 matrix T a:::a::43 bits 2.2 * * * 2.0 * * * 1.7 ******* 1.5 ******* Relative 1.3 ******* Entropy 1.1 ******* (14.5 bits) 0.9 ******* 0.7 ******* 0.4 ******** 0.2 ********* 0.0 --------- Multilevel TGAGTCACC consensus TT sequence G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCABY MEME-3 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------- chr1:232678500-232679000 + 20 3.19e-06 CCTGCAAATA TGAGTCACC CTGGTACGTG chr1:236097025-236097525 - 9 3.19e-06 TGCTCCATTC TGAGTCACC CCTGGCCG chr4:128393141-128393641 + 31 3.19e-06 AGCTTATAAG TGAGTCACC CATGAAATAC chr17:76659811-76660311 + 20 3.19e-06 GTTGTTTTGC TGAGTCACC CTATGTTTAT chr15:70569777-70570277 - 77 3.19e-06 ATTATAGGTG TGAGTCACC ATGCCCGGCC chr7:148772526-148773026 + 36 3.19e-06 ctgtgtagca tgagtcacc ctgccctcat chr18:3409053-3409553 - 77 3.19e-06 ATTACAGGCA TGAGTCACC GTGCCTGGCA chr15:67150050-67150550 - 1 3.19e-06 TCCTTAATTA TGAGTCACC chr18:26233286-26233786 - 11 3.19e-06 TAGTAACTTC TGAGTCACC CAAACAGCTC chr8:1976003-1976503 - 13 3.19e-06 GATATCGCCC TGAGTCACC AAGGGAACAC chr17:51121803-51122303 - 54 3.19e-06 GACGGAGAGC TGAGTCACC TGAGACACAG chr1:151988337-151988837 + 75 7.23e-06 GAATCTGGCA TGAGTCATC TGAAAGGCAG chr1:234700125-234700625 - 73 7.23e-06 ATAATGCCTC TGAGTCATC CATTAACCTC chr17:39769874-39770374 - 40 7.23e-06 TCATACACAT TGAGTCATC GTGTCTACAG chr19:42468361-42468861 + 18 7.23e-06 TGCGGAGTCA TGAGTCATC CGTAGGGAAC chr15:70526484-70526984 + 83 7.23e-06 TATTATCCAA TGAGTCATC GGCTGCGTG chr15:70833724-70834224 + 89 7.23e-06 CCAGGGGGAA TGAGTCATC CCA chr6:49541200-49541700 + 74 7.23e-06 GAGTACTACA TGAGTCATC CTTTGCAGTT chr2:149063145-149063645 - 11 7.23e-06 ATATGGTAGC TGAGTCATC AACTACTGCT chr5:1950696-1951196 + 22 7.23e-06 TGTGGGCGCG TGAGTCATC TGCTCTGTGT chr11:116232342-11623284 + 11 7.23e-06 ATACCCTCCG TGAGTCATC TGTCTTCTGC chr19:33473292-33473792 - 30 7.23e-06 TGTGTTAAAT TGAGTCATC TGCCGGTTTT chr2:25009924-25010424 + 28 7.23e-06 TTGACGTTAC TGAGTCATC TGAGCTAAGT chr7:151426368-151426868 + 90 7.23e-06 gtgcagcttg tgagtcatc gg chr19:40920940-40921440 + 57 1.45e-05 GGGTAAACAC TGAGTCACT GTGTGTAAAG chr5:174531680-174532180 + 21 1.45e-05 CTATTAACTA TGAGTCAGC CTGTGACCCT chr7:80876829-80877329 + 90 1.45e-05 AGTTTGCTTC TGAGTCAGC CT chr10:33264179-33264679 - 35 1.45e-05 CCACTCAGAA TGAGTCACT CACCCTTGGT chr10:70378100-70378600 - 71 1.45e-05 ATTACAGGCA TGAGTCACT GCGCCCGGCT chr18:48998086-48998586 - 4 1.45e-05 TCCAGGGCCC TGAGTCACT ACG chr19:40921158-40921658 + 74 1.45e-05 GGGTAAACAC TGAGTCACT GTGTGTAAAG chr1:14929401-14929901 + 64 1.45e-05 GTGTTTGCTG TGAGTCACT AAGGGCTGTA chr17:13204573-13205073 + 16 1.45e-05 GTGTGGTAAT TGAGTCAGC AACGTGGGTC chr8:630774-631274 - 3 1.45e-05 TAGGAGGTTG TGAGTCAGC TC chr16:29943926-29944426 - 43 1.45e-05 AATAAACCTC TGAGTCAGC CTGGACTCCA chr1:67686594-67687094 + 30 1.45e-05 GAGATCCCTG TGAGTCAGC AGTCAGCCCA chr3:194364923-194365423 - 12 1.45e-05 GGGGCTGGAC TGAGTCACT GAAGTGATTG chr21:43857415-43857915 - 10 1.45e-05 ATTACAGGCA TGAGTCACT ACACCCGAC chr22:24727041-24727541 + 66 2.27e-05 GTTTTCCAAA TGAGTCATT TGtaattaca chr10:99667007-99667507 + 68 2.27e-05 GCAGCCTCCA TGAGtcatt taagaggcaa chr17:46279646-46280146 + 76 2.27e-05 atctaatgca tgagtcatt gtcttgccct chr5:125485064-125485564 - 44 2.27e-05 GCCATTCGTG TGAGTCACG GAGTGACTTT chr10:104331416-10433191 + 14 2.27e-05 CACCTGGAAG TGAGTCATT TGATAATTGC chr1:151494766-151495266 - 49 2.27e-05 TGAGACAAGA TGAGTCATT CATAAAAAAT chr6:47134630-47135130 - 28 2.27e-05 TACCTTGGTG TGAGTCATT TCCTGAGAAT chr1:36299872-36300372 - 50 2.27e-05 CTTAATACGA TGAGTCATT ATCTATGTAC chr1:41870097-41870597 + 34 2.68e-05 ccccctagta tgagtcaca ttcgacttat chr5:173302372-173302872 - 43 2.68e-05 TTGGCCAGGC TGAGTCACA GTCTAGCCTC chr14:95256147-95256647 - 55 2.68e-05 AATTATCTGT TGAGTCACA GTGTCGTTGG chr1:109307340-109307840 - 62 2.68e-05 TGAGGTGTTG TGAGTCACA CAGCTAGTTG chr1:8027938-8028438 + 29 2.68e-05 ATGATGGAAA TGAGTCACA ACTAATTGCA chr1:230104609-230105109 + 39 2.68e-05 CTTGCCAGGC TGAGTCACA GCTGACTTAG chr3:100002819-100003319 - 49 2.68e-05 CCTCAGTATG TGAGTCACA CAGACATCAA chr5:136729942-136730442 - 64 2.68e-05 GTTATGAGGG TGAGTCACA TCTCTCAGTG chr6:4139230-4139730 + 40 3.08e-05 TAATAAGTTG TGAGTCAGT TGCTACCTTT chr20:62088469-62088969 - 24 3.08e-05 ACCACAAACA TGAGTCAGT AGGTTTGTTT chr1:41783151-41783651 - 13 3.08e-05 CCCCTCTCTT TGAGTCAGT GTGTGATTCA chr1:6956321-6956821 - 27 3.08e-05 TGTTGCCTTC TGAGTCAGT TTTAAGAGAT chr7:127820246-127820746 + 24 3.48e-05 AAGACAAAGA TGAGTCATG TTGCTGTTCT chr5:174410517-174411017 + 83 3.48e-05 TTACTAGGAC TGAGTCATG CCTGGTTTC chr5:74632048-74632548 + 60 3.48e-05 GCTTTAGAGG TGAGTCATG CATTCATATC chr3:170203884-170204384 + 29 3.48e-05 ACCTCCTGCT TGAGTCATG GGGTGAAAAG chr10:103504272-10350477 - 54 3.48e-05 TCAACAGCAA TGAGTCATG TTGACAGCAT chr12:114914229-11491472 + 25 3.99e-05 TATGATCCAG TGAGTCATA TCGCTCCATG chr13:110965217-11096571 - 10 4.31e-05 GGGTGGAGAA TGAGTCAGG ATGGAGTAG chr17:1080712-1081212 + 42 4.31e-05 CGTCATCGAG TGAGTCAGG ATGAGAAGCC chr1:58779939-58780439 - 21 4.31e-05 AACCACTAAT TGAGTCAGG GCTGTTTGCT chr4:31089732-31090232 - 77 4.31e-05 ACACGACATC TGAGTCAGG TGTTTCTTAA chr16:15590843-15591343 + 74 4.72e-05 cttgaaacag tgagtcaga tcctgttatc chr22:29589968-29590468 - 86 4.97e-05 CAGGCA TGAGCCACC GCGCCTAGTC chr17:46101206-46101706 - 74 4.97e-05 ATTACAGGCC TGAGCCACC GTGCCCAGCT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCABY MEME-3 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:232678500-232679000 3.2e-06 19_[+3]_72 chr1:236097025-236097525 3.2e-06 8_[-3]_83 chr4:128393141-128393641 3.2e-06 30_[+3]_61 chr17:76659811-76660311 3.2e-06 19_[+3]_72 chr15:70569777-70570277 3.2e-06 76_[-3]_15 chr7:148772526-148773026 3.2e-06 35_[+3]_56 chr18:3409053-3409553 3.2e-06 76_[-3]_15 chr15:67150050-67150550 3.2e-06 [-3]_91 chr18:26233286-26233786 3.2e-06 10_[-3]_81 chr8:1976003-1976503 3.2e-06 12_[-3]_79 chr17:51121803-51122303 3.2e-06 53_[-3]_38 chr1:151988337-151988837 7.2e-06 74_[+3]_17 chr1:234700125-234700625 7.2e-06 72_[-3]_19 chr17:39769874-39770374 7.2e-06 39_[-3]_52 chr19:42468361-42468861 7.2e-06 17_[+3]_74 chr15:70526484-70526984 7.2e-06 82_[+3]_9 chr15:70833724-70834224 7.2e-06 88_[+3]_3 chr6:49541200-49541700 7.2e-06 73_[+3]_18 chr2:149063145-149063645 7.2e-06 10_[-3]_81 chr5:1950696-1951196 7.2e-06 21_[+3]_70 chr11:116232342-11623284 7.2e-06 10_[+3]_81 chr19:33473292-33473792 7.2e-06 29_[-3]_62 chr2:25009924-25010424 7.2e-06 27_[+3]_64 chr7:151426368-151426868 7.2e-06 89_[+3]_2 chr19:40920940-40921440 1.4e-05 56_[+3]_35 chr5:174531680-174532180 1.4e-05 20_[+3]_71 chr7:80876829-80877329 1.4e-05 89_[+3]_2 chr10:33264179-33264679 1.4e-05 34_[-3]_57 chr10:70378100-70378600 1.4e-05 70_[-3]_21 chr18:48998086-48998586 1.4e-05 3_[-3]_88 chr19:40921158-40921658 1.4e-05 73_[+3]_18 chr1:14929401-14929901 1.4e-05 63_[+3]_28 chr17:13204573-13205073 1.4e-05 15_[+3]_76 chr8:630774-631274 1.4e-05 2_[-3]_89 chr16:29943926-29944426 1.4e-05 42_[-3]_49 chr1:67686594-67687094 1.4e-05 29_[+3]_62 chr3:194364923-194365423 1.4e-05 11_[-3]_80 chr21:43857415-43857915 1.4e-05 9_[-3]_82 chr22:24727041-24727541 2.3e-05 65_[+3]_26 chr10:99667007-99667507 2.3e-05 67_[+3]_24 chr17:46279646-46280146 2.3e-05 75_[+3]_16 chr5:125485064-125485564 2.3e-05 43_[-3]_48 chr10:104331416-10433191 2.3e-05 13_[+3]_78 chr1:151494766-151495266 2.3e-05 48_[-3]_43 chr6:47134630-47135130 2.3e-05 27_[-3]_64 chr1:36299872-36300372 2.3e-05 49_[-3]_42 chr1:41870097-41870597 2.7e-05 33_[+3]_58 chr5:173302372-173302872 2.7e-05 42_[-3]_49 chr14:95256147-95256647 2.7e-05 54_[-3]_37 chr1:109307340-109307840 2.7e-05 61_[-3]_30 chr1:8027938-8028438 2.7e-05 28_[+3]_63 chr1:230104609-230105109 2.7e-05 38_[+3]_53 chr3:100002819-100003319 2.7e-05 48_[-3]_43 chr5:136729942-136730442 2.7e-05 63_[-3]_28 chr6:4139230-4139730 3.1e-05 39_[+3]_52 chr20:62088469-62088969 3.1e-05 23_[-3]_68 chr1:41783151-41783651 3.1e-05 12_[-3]_79 chr1:6956321-6956821 3.1e-05 26_[-3]_65 chr7:127820246-127820746 3.5e-05 23_[+3]_68 chr5:174410517-174411017 3.5e-05 82_[+3]_9 chr5:74632048-74632548 3.5e-05 59_[+3]_32 chr3:170203884-170204384 3.5e-05 28_[+3]_63 chr10:103504272-10350477 3.5e-05 53_[-3]_38 chr12:114914229-11491472 4e-05 24_[+3]_67 chr13:110965217-11096571 4.3e-05 9_[-3]_82 chr17:1080712-1081212 4.3e-05 41_[+3]_50 chr1:58779939-58780439 4.3e-05 20_[-3]_71 chr4:31089732-31090232 4.3e-05 76_[-3]_15 chr16:15590843-15591343 4.7e-05 73_[+3]_18 chr22:29589968-29590468 5e-05 85_[-3]_6 chr17:46101206-46101706 5e-05 73_[-3]_18 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCABY MEME-3 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF TGAGTCABY width=9 seqs=71 chr1:232678500-232679000 ( 20) TGAGTCACC 1 chr1:236097025-236097525 ( 9) TGAGTCACC 1 chr4:128393141-128393641 ( 31) TGAGTCACC 1 chr17:76659811-76660311 ( 20) TGAGTCACC 1 chr15:70569777-70570277 ( 77) TGAGTCACC 1 chr7:148772526-148773026 ( 36) TGAGTCACC 1 chr18:3409053-3409553 ( 77) TGAGTCACC 1 chr15:67150050-67150550 ( 1) TGAGTCACC 1 chr18:26233286-26233786 ( 11) TGAGTCACC 1 chr8:1976003-1976503 ( 13) TGAGTCACC 1 chr17:51121803-51122303 ( 54) TGAGTCACC 1 chr1:151988337-151988837 ( 75) TGAGTCATC 1 chr1:234700125-234700625 ( 73) TGAGTCATC 1 chr17:39769874-39770374 ( 40) TGAGTCATC 1 chr19:42468361-42468861 ( 18) TGAGTCATC 1 chr15:70526484-70526984 ( 83) TGAGTCATC 1 chr15:70833724-70834224 ( 89) TGAGTCATC 1 chr6:49541200-49541700 ( 74) TGAGTCATC 1 chr2:149063145-149063645 ( 11) TGAGTCATC 1 chr5:1950696-1951196 ( 22) TGAGTCATC 1 chr11:116232342-11623284 ( 11) TGAGTCATC 1 chr19:33473292-33473792 ( 30) TGAGTCATC 1 chr2:25009924-25010424 ( 28) TGAGTCATC 1 chr7:151426368-151426868 ( 90) TGAGTCATC 1 chr19:40920940-40921440 ( 57) TGAGTCACT 1 chr5:174531680-174532180 ( 21) TGAGTCAGC 1 chr7:80876829-80877329 ( 90) TGAGTCAGC 1 chr10:33264179-33264679 ( 35) TGAGTCACT 1 chr10:70378100-70378600 ( 71) TGAGTCACT 1 chr18:48998086-48998586 ( 4) TGAGTCACT 1 chr19:40921158-40921658 ( 74) TGAGTCACT 1 chr1:14929401-14929901 ( 64) TGAGTCACT 1 chr17:13204573-13205073 ( 16) TGAGTCAGC 1 chr8:630774-631274 ( 3) TGAGTCAGC 1 chr16:29943926-29944426 ( 43) TGAGTCAGC 1 chr1:67686594-67687094 ( 30) TGAGTCAGC 1 chr3:194364923-194365423 ( 12) TGAGTCACT 1 chr21:43857415-43857915 ( 10) TGAGTCACT 1 chr22:24727041-24727541 ( 66) TGAGTCATT 1 chr10:99667007-99667507 ( 68) TGAGTCATT 1 chr17:46279646-46280146 ( 76) TGAGTCATT 1 chr5:125485064-125485564 ( 44) TGAGTCACG 1 chr10:104331416-10433191 ( 14) TGAGTCATT 1 chr1:151494766-151495266 ( 49) TGAGTCATT 1 chr6:47134630-47135130 ( 28) TGAGTCATT 1 chr1:36299872-36300372 ( 50) TGAGTCATT 1 chr1:41870097-41870597 ( 34) TGAGTCACA 1 chr5:173302372-173302872 ( 43) TGAGTCACA 1 chr14:95256147-95256647 ( 55) TGAGTCACA 1 chr1:109307340-109307840 ( 62) TGAGTCACA 1 chr1:8027938-8028438 ( 29) TGAGTCACA 1 chr1:230104609-230105109 ( 39) TGAGTCACA 1 chr3:100002819-100003319 ( 49) TGAGTCACA 1 chr5:136729942-136730442 ( 64) TGAGTCACA 1 chr6:4139230-4139730 ( 40) TGAGTCAGT 1 chr20:62088469-62088969 ( 24) TGAGTCAGT 1 chr1:41783151-41783651 ( 13) TGAGTCAGT 1 chr1:6956321-6956821 ( 27) TGAGTCAGT 1 chr7:127820246-127820746 ( 24) TGAGTCATG 1 chr5:174410517-174411017 ( 83) TGAGTCATG 1 chr5:74632048-74632548 ( 60) TGAGTCATG 1 chr3:170203884-170204384 ( 29) TGAGTCATG 1 chr10:103504272-10350477 ( 54) TGAGTCATG 1 chr12:114914229-11491472 ( 25) TGAGTCATA 1 chr13:110965217-11096571 ( 10) TGAGTCAGG 1 chr17:1080712-1081212 ( 42) TGAGTCAGG 1 chr1:58779939-58780439 ( 21) TGAGTCAGG 1 chr4:31089732-31090232 ( 77) TGAGTCAGG 1 chr16:15590843-15591343 ( 74) TGAGTCAGA 1 chr22:29589968-29590468 ( 86) TGAGCCACC 1 chr17:46101206-46101706 ( 74) TGAGCCACC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCABY MEME-3 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 9 n= 55200 bayes= 10.9968 E= 4.0e-033 -1279 -1279 -1279 184 -1279 -1279 218 -1279 184 -1279 -1279 -1279 -1279 -1279 218 -1279 -1279 -297 -1279 180 -1279 218 -1279 -1279 184 -1279 -1279 -1279 -1279 94 -6 39 -99 103 -65 -6 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCABY MEME-3 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 9 nsites= 71 E= 4.0e-033 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.028169 0.000000 0.971831 0.000000 1.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.422535 0.211268 0.366197 0.140845 0.450704 0.140845 0.267606 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif TGAGTCABY MEME-3 regular expression -------------------------------------------------------------------------------- TGAGTCA[CTG][CT] -------------------------------------------------------------------------------- Time 1095.54 secs. ******************************************************************************** ******************************************************************************** MOTIF YTYTCWCTCTCTCTCT MEME-4 width = 16 sites = 13 llr = 213 E-value = 3.5e-008 ******************************************************************************** -------------------------------------------------------------------------------- Motif YTYTCWCTCTCTCTCT MEME-4 Description -------------------------------------------------------------------------------- Simplified A ::1::3:::1:2:::: pos.-specific C 616:71a:7:a2a:91 probability G ::::::::2::::::: matrix T 493a36:a19:7:a19 bits 2.2 * * * 2.0 * * * 1.7 * ** * *** 1.5 * * ** ** **** Relative 1.3 * * ** ** **** Entropy 1.1 ** ** ***** **** (23.6 bits) 0.9 ***** ***** **** 0.7 **************** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel CTCTCTCTCTCTCTCT consensus T T TA G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTYTCWCTCTCTCTCT MEME-4 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr1:155244568-155245068 - 83 2.09e-10 CT CTCTCTCTCTCTCTCT CGCTCGCTCT chr19:13026443-13026943 + 83 2.09e-10 CCAAACcttt ctctctctctctctct ct chr21:32771774-32772274 - 1 2.09e-10 AGGTGTGGGG CTCTCTCTCTCTCTCT chr10:101442039-10144253 + 25 2.09e-10 GAATTAGAAt ctctctctctctctct ctctgtctct chr1:167658798-167659298 + 68 1.58e-09 attttccctc ctctctctctccctct ccttcccacc chr3:136802543-136803043 - 80 5.80e-09 TCTCT CTCTTTCTGTCTCTCT CTCTCACACA chr1:234723889-234724389 - 80 9.87e-09 GTGGT TTTTTTCTCTCTCTCT CCACCTCCCT chr2:149657404-149657904 - 38 5.00e-08 TTTAGAGACA CTCTTACTGTCACTCT AAATATAGGT chr6:107659021-107659521 - 16 8.95e-08 TGGGTGATCT TTCTCACTTTCCCTCT TGTTTTCATT chr7:70092357-70092857 - 44 1.13e-07 CCAATATCAG CTTTCACTCACACTCT CTTAAGCTCA chr17:29379377-29379877 + 72 1.26e-07 TGACAACACG TTTTTCCTGTCTCTCT TTGTAACTGG chr5:57042472-57042972 + 2 1.61e-07 t tcttctctctctctcc taacagccag chr1:41870097-41870597 + 49 1.86e-07 cacattcgac ttatcactctctcttt tcaacgttgc -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTYTCWCTCTCTCTCT MEME-4 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:155244568-155245068 2.1e-10 82_[-4]_2 chr19:13026443-13026943 2.1e-10 82_[+4]_2 chr21:32771774-32772274 2.1e-10 [-4]_84 chr10:101442039-10144253 2.1e-10 24_[+4]_60 chr1:167658798-167659298 1.6e-09 67_[+4]_17 chr3:136802543-136803043 5.8e-09 79_[-4]_5 chr1:234723889-234724389 9.9e-09 79_[-4]_5 chr2:149657404-149657904 5e-08 37_[-4]_47 chr6:107659021-107659521 9e-08 15_[-4]_69 chr7:70092357-70092857 1.1e-07 43_[-4]_41 chr17:29379377-29379877 1.3e-07 71_[+4]_13 chr5:57042472-57042972 1.6e-07 1_[+4]_83 chr1:41870097-41870597 1.9e-07 48_[+4]_36 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTYTCWCTCTCTCTCT MEME-4 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF YTYTCWCTCTCTCTCT width=16 seqs=13 chr1:155244568-155245068 ( 83) CTCTCTCTCTCTCTCT 1 chr19:13026443-13026943 ( 83) CTCTCTCTCTCTCTCT 1 chr21:32771774-32772274 ( 1) CTCTCTCTCTCTCTCT 1 chr10:101442039-10144253 ( 25) CTCTCTCTCTCTCTCT 1 chr1:167658798-167659298 ( 68) CTCTCTCTCTCCCTCT 1 chr3:136802543-136803043 ( 80) CTCTTTCTGTCTCTCT 1 chr1:234723889-234724389 ( 80) TTTTTTCTCTCTCTCT 1 chr2:149657404-149657904 ( 38) CTCTTACTGTCACTCT 1 chr6:107659021-107659521 ( 16) TTCTCACTTTCCCTCT 1 chr7:70092357-70092857 ( 44) CTTTCACTCACACTCT 1 chr17:29379377-29379877 ( 72) TTTTTCCTGTCTCTCT 1 chr5:57042472-57042972 ( 2) TCTTCTCTCTCTCTCC 1 chr1:41870097-41870597 ( 49) TTATCACTCTCTCTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTYTCWCTCTCTCTCT MEME-4 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 13.102 E= 3.5e-008 -1035 148 -1035 46 -1035 -152 -1035 172 -186 148 -1035 14 -1035 -1035 -1035 184 -1035 165 -1035 14 14 -152 -1035 114 -1035 218 -1035 -1035 -1035 -1035 -1035 184 -1035 165 6 -186 -186 -1035 -1035 172 -1035 218 -1035 -1035 -86 -52 -1035 131 -1035 218 -1035 -1035 -1035 -1035 -1035 184 -1035 206 -1035 -186 -1035 -152 -1035 172 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTYTCWCTCTCTCTCT MEME-4 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 13 E= 3.5e-008 0.000000 0.615385 0.000000 0.384615 0.000000 0.076923 0.000000 0.923077 0.076923 0.615385 0.000000 0.307692 0.000000 0.000000 0.000000 1.000000 0.000000 0.692308 0.000000 0.307692 0.307692 0.076923 0.000000 0.615385 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.692308 0.230769 0.076923 0.076923 0.000000 0.000000 0.923077 0.000000 1.000000 0.000000 0.000000 0.153846 0.153846 0.000000 0.692308 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.923077 0.000000 0.076923 0.000000 0.076923 0.000000 0.923077 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif YTYTCWCTCTCTCTCT MEME-4 regular expression -------------------------------------------------------------------------------- [CT]T[CT]T[CT][TA]CT[CG]TCTCTCT -------------------------------------------------------------------------------- Time 1410.85 secs. ******************************************************************************** ******************************************************************************** MOTIF RCATGATMTCATTTAATCCTCAYAAMARBC MEME-5 width = 30 sites = 10 llr = 227 E-value = 1.1e-005 ******************************************************************************** -------------------------------------------------------------------------------- Motif RCATGATMTCATTTAATCCTCAYAAMARBC MEME-5 Description -------------------------------------------------------------------------------- Simplified A 318::7:4:3a::17a::1::6177395:: pos.-specific C 26:12:1617:2:11:196:a26:25:148 probability G 51::7:1:::::::1:::12:1:3:1:442 matrix T :229138:9::8a81:9128:13:111:2: bits 2.2 * 2.0 * 1.7 * * * * * 1.5 * * * * * * Relative 1.3 * * * * *** * * * Entropy 1.1 *** ******* *** ** * * * (32.8 bits) 0.9 ************ *** ** * * * 0.7 * **************** ** *** **** 0.4 ****************************** 0.2 ****************************** 0.0 ------------------------------ Multilevel GCATGATCTCATTTAATCCTCACAACAACC consensus ATT CT A A C TG CTGCA GGG sequence C T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATGATMTCATTTAATCCTCAYAAMARBC MEME-5 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------------------------ chr16:14549595-14550095 + 30 1.23e-14 aacttaatat ccatgatctcatttcatcctcacaacaatc atgccaagta chr15:69143674-69144174 + 24 3.42e-14 tgttttatag gcttgatctcattaaatcctcacgacaagc ctctgggatT chr15:70494057-70494557 + 61 6.79e-14 cccttaatga gcattatctcatttaatcctcctgacaacc cgggatgagg chr7:128251293-128251793 + 38 9.26e-12 cctttcacgt gcatcagataatttgatcctcataaaagcc tagagataga chr5:54302199-54302699 - 28 2.26e-11 TGTTTTCCTT GGATCACCTAATTTAATCCTCCCAACAGTG CTGTTAACCA chr17:4788342-4788842 + 48 2.26e-11 gtgttttcac atacgttatcatttaatcctcacatgaggc ttgcaaagta chr7:116218154-116218654 - 32 7.62e-11 TTTCAATGAA ACATGATATCACTTTATCATCAAACAAAGC AAGGGAAAAG chr1:85274855-85275355 - 5 2.40e-10 ACACAGTTTA CAATGTTCCCACTTAACCTTCGCAACAACC TCTA chr17:30263824-30264324 - 53 3.80e-10 AGGAAAGAAA ACATGATCTAATTTAATTGGCACACTTGGC CTGACCTCAG chr1:90834832-90835332 + 25 2.96e-09 GACACACGCA GTTTGTTATCATTCAATCTGCTTGAAACCG CAAACTGGTC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATGATMTCATTTAATCCTCAYAAMARBC MEME-5 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr16:14549595-14550095 1.2e-14 29_[+5]_41 chr15:69143674-69144174 3.4e-14 23_[+5]_47 chr15:70494057-70494557 6.8e-14 60_[+5]_10 chr7:128251293-128251793 9.3e-12 37_[+5]_33 chr5:54302199-54302699 2.3e-11 27_[-5]_43 chr17:4788342-4788842 2.3e-11 47_[+5]_23 chr7:116218154-116218654 7.6e-11 31_[-5]_39 chr1:85274855-85275355 2.4e-10 4_[-5]_66 chr17:30263824-30264324 3.8e-10 52_[-5]_18 chr1:90834832-90835332 3e-09 24_[+5]_46 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATGATMTCATTTAATCCTCAYAAMARBC MEME-5 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RCATGATMTCATTTAATCCTCAYAAMARBC width=30 seqs=10 chr16:14549595-14550095 ( 30) CCATGATCTCATTTCATCCTCACAACAATC 1 chr15:69143674-69144174 ( 24) GCTTGATCTCATTAAATCCTCACGACAAGC 1 chr15:70494057-70494557 ( 61) GCATTATCTCATTTAATCCTCCTGACAACC 1 chr7:128251293-128251793 ( 38) GCATCAGATAATTTGATCCTCATAAAAGCC 1 chr5:54302199-54302699 ( 28) GGATCACCTAATTTAATCCTCCCAACAGTG 1 chr17:4788342-4788842 ( 48) ATACGTTATCATTTAATCCTCACATGAGGC 1 chr7:116218154-116218654 ( 32) ACATGATATCACTTTATCATCAAACAAAGC 1 chr1:85274855-85275355 ( 5) CAATGTTCCCACTTAACCTTCGCAACAACC 1 chr17:30263824-30264324 ( 53) ACATGATCTAATTTAATTGGCACACTTGGC 1 chr1:90834832-90835332 ( 25) GTTTGTTATCATTCAATCTGCTTGAAACCG 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATGATMTCATTTAATCCTCAYAAMARBC MEME-5 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 30 n= 42600 bayes= 12.9999 E= 1.1e-005 10 -14 118 -997 -148 144 -114 -48 152 -997 -997 -48 -997 -114 -997 169 -997 -14 166 -148 132 -997 -997 10 -997 -114 -114 152 52 144 -997 -997 -997 -114 -997 169 10 166 -997 -997 184 -997 -997 -997 -997 -14 -997 152 -997 -997 -997 184 -148 -114 -997 152 132 -114 -114 -148 184 -997 -997 -997 -997 -114 -997 169 -997 203 -997 -148 -148 144 -114 -48 -997 -997 -14 152 -997 218 -997 -997 110 -14 -114 -148 -148 144 -997 10 132 -997 44 -997 132 -14 -997 -148 10 118 -114 -148 169 -997 -997 -148 84 -114 86 -997 -997 86 86 -48 -997 186 -14 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATGATMTCATTTAATCCTCAYAAMARBC MEME-5 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 30 nsites= 10 E= 1.1e-005 0.300000 0.200000 0.500000 0.000000 0.100000 0.600000 0.100000 0.200000 0.800000 0.000000 0.000000 0.200000 0.000000 0.100000 0.000000 0.900000 0.000000 0.200000 0.700000 0.100000 0.700000 0.000000 0.000000 0.300000 0.000000 0.100000 0.100000 0.800000 0.400000 0.600000 0.000000 0.000000 0.000000 0.100000 0.000000 0.900000 0.300000 0.700000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.200000 0.000000 0.800000 0.000000 0.000000 0.000000 1.000000 0.100000 0.100000 0.000000 0.800000 0.700000 0.100000 0.100000 0.100000 1.000000 0.000000 0.000000 0.000000 0.000000 0.100000 0.000000 0.900000 0.000000 0.900000 0.000000 0.100000 0.100000 0.600000 0.100000 0.200000 0.000000 0.000000 0.200000 0.800000 0.000000 1.000000 0.000000 0.000000 0.600000 0.200000 0.100000 0.100000 0.100000 0.600000 0.000000 0.300000 0.700000 0.000000 0.300000 0.000000 0.700000 0.200000 0.000000 0.100000 0.300000 0.500000 0.100000 0.100000 0.900000 0.000000 0.000000 0.100000 0.500000 0.100000 0.400000 0.000000 0.000000 0.400000 0.400000 0.200000 0.000000 0.800000 0.200000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RCATGATMTCATTTAATCCTCAYAAMARBC MEME-5 regular expression -------------------------------------------------------------------------------- [GAC][CT][AT]T[GC][AT]T[CA]T[CA]A[TC]TTAATC[CT][TG]C[AC][CT][AG][AC][CA]A[AG][CGT][CG] -------------------------------------------------------------------------------- Time 1725.53 secs. ******************************************************************************** ******************************************************************************** MOTIF GCCTRTAATCCC MEME-6 width = 12 sites = 10 llr = 147 E-value = 1.9e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif GCCTRTAATCCC MEME-6 Description -------------------------------------------------------------------------------- Simplified A 1:::4:aa:::: pos.-specific C 1a92:::::aaa probability G 8:::6::::::: matrix T ::18:a::a::: bits 2.2 * *** 2.0 * *** 1.7 ** ******* 1.5 ** ******* Relative 1.3 *** ******* Entropy 1.1 ************ (21.2 bits) 0.9 ************ 0.7 ************ 0.4 ************ 0.2 ************ 0.0 ------------ Multilevel GCCTGTAATCCC consensus CA sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCTRTAATCCC MEME-6 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ------------ chr10:70378100-70378600 + 81 4.35e-08 agtgactcat gcctgtaatccc agcacttt chr10:76113925-76114425 - 11 4.35e-08 TGTGTTGTCA GCCTGTAATCCC ACACCCTTGG chr18:3409053-3409553 + 87 4.35e-08 ggtgactcat gcctgtaatccc ag chr17:46101206-46101706 + 84 4.35e-08 ggtggctcag gcctgtaatccc agcac chr21:43857415-43857915 + 20 4.35e-08 agtgactcat gcctgtaatccc agcactttgg chr17:75368240-75368740 - 51 9.85e-08 AGTGGGTCAC GCCTATAATCCC AGCACTTTGG chr19:28405773-28406273 + 66 1.76e-07 CCACACTCCT GCCCATAATCCC TGGCCCACAG chr1:244347910-244348410 + 59 3.30e-07 CAGACATTCT GCTTGTAATCCC GTTGGGAATG chr15:70569777-70570277 + 87 4.54e-07 ggtgactcac acctataatccc ag chr6:42762324-42762824 + 85 6.89e-07 attttttaca ccccataatccc agtt -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCTRTAATCCC MEME-6 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:70378100-70378600 4.4e-08 80_[+6]_8 chr10:76113925-76114425 4.4e-08 10_[-6]_78 chr18:3409053-3409553 4.4e-08 86_[+6]_2 chr17:46101206-46101706 4.4e-08 83_[+6]_5 chr21:43857415-43857915 4.4e-08 19_[+6]_69 chr17:75368240-75368740 9.8e-08 50_[-6]_38 chr19:28405773-28406273 1.8e-07 65_[+6]_23 chr1:244347910-244348410 3.3e-07 58_[+6]_30 chr15:70569777-70570277 4.5e-07 86_[+6]_2 chr6:42762324-42762824 6.9e-07 84_[+6]_4 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCTRTAATCCC MEME-6 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GCCTRTAATCCC width=12 seqs=10 chr10:70378100-70378600 ( 81) GCCTGTAATCCC 1 chr10:76113925-76114425 ( 11) GCCTGTAATCCC 1 chr18:3409053-3409553 ( 87) GCCTGTAATCCC 1 chr17:46101206-46101706 ( 84) GCCTGTAATCCC 1 chr21:43857415-43857915 ( 20) GCCTGTAATCCC 1 chr17:75368240-75368740 ( 51) GCCTATAATCCC 1 chr19:28405773-28406273 ( 66) GCCCATAATCCC 1 chr1:244347910-244348410 ( 59) GCTTGTAATCCC 1 chr15:70569777-70570277 ( 87) ACCTATAATCCC 1 chr6:42762324-42762824 ( 85) CCCCATAATCCC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCTRTAATCCC MEME-6 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 12 n= 53400 bayes= 13.3259 E= 1.9e+000 -148 -114 186 -997 -997 218 -997 -997 -997 203 -997 -148 -997 -14 -997 152 52 -997 144 -997 -997 -997 -997 184 184 -997 -997 -997 184 -997 -997 -997 -997 -997 -997 184 -997 218 -997 -997 -997 218 -997 -997 -997 218 -997 -997 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCTRTAATCCC MEME-6 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 12 nsites= 10 E= 1.9e+000 0.100000 0.100000 0.800000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.900000 0.000000 0.100000 0.000000 0.200000 0.000000 0.800000 0.400000 0.000000 0.600000 0.000000 0.000000 0.000000 0.000000 1.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 0.000000 0.000000 0.000000 1.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GCCTRTAATCCC MEME-6 regular expression -------------------------------------------------------------------------------- GCC[TC][GA]TAATCCC -------------------------------------------------------------------------------- Time 2038.47 secs. ******************************************************************************** ******************************************************************************** MOTIF GTTTTKTTTTKTTTTT MEME-7 width = 16 sites = 16 llr = 227 E-value = 2.5e-001 ******************************************************************************** -------------------------------------------------------------------------------- Motif GTTTTKTTTTKTTTTT MEME-7 Description -------------------------------------------------------------------------------- Simplified A 1:1:2:::::::::1: pos.-specific C :::::2::::::1:12 probability G 9:13241:1:6123:: matrix T :a88649a9a498898 bits 2.2 2.0 1.7 * * * 1.5 ** **** * Relative 1.3 ** **** * * Entropy 1.1 **** ****** *** (20.5 bits) 0.9 **** ********** 0.7 **************** 0.4 **************** 0.2 **************** 0.0 ---------------- Multilevel GTTTTGTTTTGTTTTT consensus G T T G sequence -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTTTKTTTTKTTTTT MEME-7 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr18:62445326-62445826 - 67 6.70e-10 GTTGTGCTGT GTTTTGTTTTGTTTTT TGTTAAACCC chr18:3409053-3409553 - 16 6.70e-10 AGCTTTGTTT GTTTTGTTTTGTTTTT AGAGACAGGA chr6:167829462-167829962 + 4 1.65e-08 TGG GTTTTCTTTTGTTGTT TTTTTTTTGG chr17:75368240-75368740 + 82 2.77e-08 tgcgtcaggc GTTTGttttttttttt gtt chr9:69090893-69091393 + 39 4.73e-08 TTGTAAATTG GTTTTGTTTTGGTTTT CCTAATTAGA chr7:95897498-95897998 + 35 8.55e-08 TTATAGTTGA GTTGATTTTTTTTTTT TGCAATAATG chr8:1976003-1976503 + 80 1.14e-07 GTGGTCTTGA GTTTGTTTTTTTTTTC CTCTT chr1:151494766-151495266 + 4 1.38e-07 GAA GTTTTTTTTTTTTTCT GCCCACTTCT chr22:29914166-29914666 + 73 1.97e-07 attaaaatag gttgttttttgtttat tgtgagttca chr7:91034901-91035401 - 84 2.94e-07 T ATTTACTTTTGTTTTT ATGTGGCTGC chr10:101974357-10197485 - 80 2.94e-07 ACAGT GTTTACTTTTGTCTTT CTAACCATTT chr9:18976689-18977189 - 27 3.44e-07 CTTCACATTT GTTTTGGTTTGTGGTT TTGTGGGGTC chr7:130356155-130356655 + 39 3.44e-07 TGGTTTCTTT GTTTTGTTGTTTTTTC CTGAGAAGCC chr19:34218157-34218657 + 75 6.91e-07 ATATGCTGCT GTGGGGTTTTGTGGTT TGTTTTCTCA chr1:167658597-167659097 + 6 8.87e-07 ttatg gtattttttttttgtc tctagtgttt chr10:110163309-11016380 - 69 9.45e-07 GTGCCTTTGA ATGGTGTTTTGTGTTT ACCCTACTTT -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTTTKTTTTKTTTTT MEME-7 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr18:62445326-62445826 6.7e-10 66_[-7]_18 chr18:3409053-3409553 6.7e-10 15_[-7]_69 chr6:167829462-167829962 1.6e-08 3_[+7]_81 chr17:75368240-75368740 2.8e-08 81_[+7]_3 chr9:69090893-69091393 4.7e-08 38_[+7]_46 chr7:95897498-95897998 8.6e-08 34_[+7]_50 chr8:1976003-1976503 1.1e-07 79_[+7]_5 chr1:151494766-151495266 1.4e-07 3_[+7]_81 chr22:29914166-29914666 2e-07 72_[+7]_12 chr7:91034901-91035401 2.9e-07 83_[-7]_1 chr10:101974357-10197485 2.9e-07 79_[-7]_5 chr9:18976689-18977189 3.4e-07 26_[-7]_58 chr7:130356155-130356655 3.4e-07 38_[+7]_46 chr19:34218157-34218657 6.9e-07 74_[+7]_10 chr1:167658597-167659097 8.9e-07 5_[+7]_79 chr10:110163309-11016380 9.4e-07 68_[-7]_16 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTTTKTTTTKTTTTT MEME-7 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF GTTTTKTTTTKTTTTT width=16 seqs=16 chr18:62445326-62445826 ( 67) GTTTTGTTTTGTTTTT 1 chr18:3409053-3409553 ( 16) GTTTTGTTTTGTTTTT 1 chr6:167829462-167829962 ( 4) GTTTTCTTTTGTTGTT 1 chr17:75368240-75368740 ( 82) GTTTGTTTTTTTTTTT 1 chr9:69090893-69091393 ( 39) GTTTTGTTTTGGTTTT 1 chr7:95897498-95897998 ( 35) GTTGATTTTTTTTTTT 1 chr8:1976003-1976503 ( 80) GTTTGTTTTTTTTTTC 1 chr1:151494766-151495266 ( 4) GTTTTTTTTTTTTTCT 1 chr22:29914166-29914666 ( 73) GTTGTTTTTTGTTTAT 1 chr7:91034901-91035401 ( 84) ATTTACTTTTGTTTTT 1 chr10:101974357-10197485 ( 80) GTTTACTTTTGTCTTT 1 chr9:18976689-18977189 ( 27) GTTTTGGTTTGTGGTT 1 chr7:130356155-130356655 ( 39) GTTTTGTTGTTTTTTC 1 chr19:34218157-34218657 ( 75) GTGGGGTTTTGTGGTT 1 chr1:167658597-167659097 ( 6) GTATTTTTTTTTTGTC 1 chr10:110163309-11016380 ( 69) ATGGTGTTTTGTGTTT 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTTTKTTTTKTTTTT MEME-7 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 12.3749 E= 2.5e-001 -116 -1064 199 -1064 -1064 -1064 -1064 184 -216 -1064 -82 154 -1064 -1064 18 142 -57 -1064 -24 116 -1064 -24 99 42 -1064 -1064 -182 175 -1064 -1064 -1064 184 -1064 -1064 -182 175 -1064 -1064 -1064 184 -1064 -1064 150 42 -1064 -1064 -182 175 -1064 -182 -24 142 -1064 -1064 18 142 -216 -182 -1064 165 -1064 -24 -1064 154 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTTTKTTTTKTTTTT MEME-7 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 16 E= 2.5e-001 0.125000 0.000000 0.875000 0.000000 0.000000 0.000000 0.000000 1.000000 0.062500 0.000000 0.125000 0.812500 0.000000 0.000000 0.250000 0.750000 0.187500 0.000000 0.187500 0.625000 0.000000 0.187500 0.437500 0.375000 0.000000 0.000000 0.062500 0.937500 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.062500 0.937500 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.625000 0.375000 0.000000 0.000000 0.062500 0.937500 0.000000 0.062500 0.187500 0.750000 0.000000 0.000000 0.250000 0.750000 0.062500 0.062500 0.000000 0.875000 0.000000 0.187500 0.000000 0.812500 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif GTTTTKTTTTKTTTTT MEME-7 regular expression -------------------------------------------------------------------------------- GTT[TG]T[GT]TTTT[GT]TT[TG]TT -------------------------------------------------------------------------------- Time 2351.32 secs. ******************************************************************************** ******************************************************************************** MOTIF RTGATTTATGWGKTGMDRWAA MEME-8 width = 21 sites = 13 llr = 212 E-value = 3.9e+000 ******************************************************************************** -------------------------------------------------------------------------------- Motif RTGATTTATGWGKTGMDRWAA MEME-8 Description -------------------------------------------------------------------------------- Simplified A 5:19::1a::521::43458a pos.-specific C ::::::1:1:1:2:251::2: probability G 539::1:::8:8426:361:: matrix T :7:1a98:925148213:41: bits 2.2 2.0 1.7 * * * * 1.5 **** ** * Relative 1.3 **** *** * * Entropy 1.1 ********** * * * * (23.6 bits) 0.9 ********** * ** * ** 0.7 ************ *** **** 0.4 ************ *** **** 0.2 ********************* 0.0 --------------------- Multilevel GTGATTTATGAGGTGCAGAAA consensus AG TT T CAGAT sequence T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGATTTATGWGKTGMDRWAA MEME-8 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- --------------------- chr8:37479262-37479762 + 5 2.58e-10 GGGG ATGATTTATTAGGTGCAGAAA GCTCGCTGAT chr10:75613697-75614197 - 51 2.58e-10 CCCTGTTTGG ATGATTTATTAGGTGCAGAAA GCATACTGAT chr1:22342013-22342513 - 61 3.86e-10 GGAAGGCAGC GTGATTTATGAGCTGCGGACA GGGCCAGCTG chr1:3403756-3404256 - 45 1.11e-09 GTTGTTAATT GTGATTTATGTGTTTATGTAA AGAAAACACG chr9:85743180-85743680 + 62 1.41e-09 ACAAGAGTGA GTGATTTATGTTTTGCGGTAA TTAAGAACTT chr17:48492582-48493082 - 77 5.61e-09 TGG GTGATTTACGAAGTGCTGAAA AGCATCTTCG chr17:43669979-43670479 + 34 7.46e-09 CAGCAAACCG GGGATTTATGTGGTGTGGGAA CAGCTCAGGT chr6:2028597-2029097 + 7 1.82e-08 TATGAA ATGATTTATGTGTTCATAATA GAGGCTAGTA chr3:181328905-181329405 - 29 8.64e-08 TGTTTACACA AGGATTTATTCGTGCCAGTAA CTAGTCACCA chr5:175378398-175378898 - 35 9.22e-08 TTATTCCAAG AGGTTTTATGAGCTGAAAACA TAAATTGCTT chr1:113021587-113022087 - 18 9.22e-08 AGAAAACCCA GGGATTTATGTGAGCCCATAA TTACAGGAAC chr6:167829462-167829962 - 57 1.35e-07 CCAATCATAG ATGATTAATGAAGTTATAAAA TTTGAAAACA chr1:220119011-220119511 + 38 2.97e-07 GAAGGGACAC GTAATGCATGTGTTGAGATAA GGCCTTTGAG -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGATTTATGWGKTGMDRWAA MEME-8 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr8:37479262-37479762 2.6e-10 4_[+8]_75 chr10:75613697-75614197 2.6e-10 50_[-8]_29 chr1:22342013-22342513 3.9e-10 60_[-8]_19 chr1:3403756-3404256 1.1e-09 44_[-8]_35 chr9:85743180-85743680 1.4e-09 61_[+8]_18 chr17:48492582-48493082 5.6e-09 76_[-8]_3 chr17:43669979-43670479 7.5e-09 33_[+8]_46 chr6:2028597-2029097 1.8e-08 6_[+8]_73 chr3:181328905-181329405 8.6e-08 28_[-8]_51 chr5:175378398-175378898 9.2e-08 34_[-8]_45 chr1:113021587-113022087 9.2e-08 17_[-8]_62 chr6:167829462-167829962 1.3e-07 56_[-8]_23 chr1:220119011-220119511 3e-07 37_[+8]_42 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGATTTATGWGKTGMDRWAA MEME-8 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF RTGATTTATGWGKTGMDRWAA width=21 seqs=13 chr8:37479262-37479762 ( 5) ATGATTTATTAGGTGCAGAAA 1 chr10:75613697-75614197 ( 51) ATGATTTATTAGGTGCAGAAA 1 chr1:22342013-22342513 ( 61) GTGATTTATGAGCTGCGGACA 1 chr1:3403756-3404256 ( 45) GTGATTTATGTGTTTATGTAA 1 chr9:85743180-85743680 ( 62) GTGATTTATGTTTTGCGGTAA 1 chr17:48492582-48493082 ( 77) GTGATTTACGAAGTGCTGAAA 1 chr17:43669979-43670479 ( 34) GGGATTTATGTGGTGTGGGAA 1 chr6:2028597-2029097 ( 7) ATGATTTATGTGTTCATAATA 1 chr3:181328905-181329405 ( 29) AGGATTTATTCGTGCCAGTAA 1 chr5:175378398-175378898 ( 35) AGGTTTTATGAGCTGAAAACA 1 chr1:113021587-113022087 ( 18) GGGATTTATGTGAGCCCATAA 1 chr6:167829462-167829962 ( 57) ATGATTAATGAAGTTATAAAA 1 chr1:220119011-220119511 ( 38) GTAATGCATGTGTTGAGATAA 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGATTTATGWGKTGMDRWAA MEME-8 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 21 n= 48000 bayes= 12.3806 E= 3.9e+000 72 -1035 129 -1035 -1035 -1035 48 131 -186 -1035 206 -1035 172 -1035 -1035 -186 -1035 -1035 -1035 184 -1035 -1035 -152 172 -186 -152 -1035 160 184 -1035 -1035 -1035 -1035 -152 -1035 172 -1035 -1035 180 -28 72 -152 -1035 72 -86 -1035 180 -186 -186 -52 80 46 -1035 -1035 -52 160 -1035 6 148 -86 46 129 -1035 -186 14 -152 48 14 46 -1035 148 -1035 95 -1035 -152 46 146 -52 -1035 -186 184 -1035 -1035 -1035 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGATTTATGWGKTGMDRWAA MEME-8 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 21 nsites= 13 E= 3.9e+000 0.461538 0.000000 0.538462 0.000000 0.000000 0.000000 0.307692 0.692308 0.076923 0.000000 0.923077 0.000000 0.923077 0.000000 0.000000 0.076923 0.000000 0.000000 0.000000 1.000000 0.000000 0.000000 0.076923 0.923077 0.076923 0.076923 0.000000 0.846154 1.000000 0.000000 0.000000 0.000000 0.000000 0.076923 0.000000 0.923077 0.000000 0.000000 0.769231 0.230769 0.461538 0.076923 0.000000 0.461538 0.153846 0.000000 0.769231 0.076923 0.076923 0.153846 0.384615 0.384615 0.000000 0.000000 0.153846 0.846154 0.000000 0.230769 0.615385 0.153846 0.384615 0.538462 0.000000 0.076923 0.307692 0.076923 0.307692 0.307692 0.384615 0.000000 0.615385 0.000000 0.538462 0.000000 0.076923 0.384615 0.769231 0.153846 0.000000 0.076923 1.000000 0.000000 0.000000 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif RTGATTTATGWGKTGMDRWAA MEME-8 regular expression -------------------------------------------------------------------------------- [GA][TG]GATTTAT[GT][AT]G[GT]T[GC][CA][AGT][GA][AT]AA -------------------------------------------------------------------------------- Time 2661.17 secs. ******************************************************************************** ******************************************************************************** MOTIF CVCNBCCCTCCTCCMY MEME-9 width = 16 sites = 44 llr = 466 E-value = 6.9e-002 ******************************************************************************** -------------------------------------------------------------------------------- Motif CVCNBCCCTCCTCCMY MEME-9 Description -------------------------------------------------------------------------------- Simplified A :4231:1:::::::3: pos.-specific C 8353369a:6a17a55 probability G 221232::32::2:12 matrix T :12332::72:91:24 bits 2.2 * 2.0 * * * 1.7 * * * 1.5 * ** * * Relative 1.3 * ** ** * Entropy 1.1 * *** ** * (15.3 bits) 0.9 * ******** 0.7 * ********* * 0.4 * * ********* * 0.2 * * ************ 0.0 ---------------- Multilevel CACTCCCCTCCTCCCC consensus CAAG GG AT sequence G CT G -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVCNBCCCTCCTCCMY MEME-9 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ---------------- chr10:624962-625462 + 74 1.86e-09 CAAGCCTCTG CGCAGCCCTCCTCCCC CGCCGCTTCC chr1:234723889-234724389 - 63 5.22e-09 TCTCTCTCTC CACCTCCCTCCTCCCT TCCTCCCTCC chr3:194134804-194135304 + 2 1.79e-08 c cgccccccgcctccct gcccccggGG chr5:174503858-174504358 - 23 9.32e-08 TTATTCCAGA CCCCCCCCTTCTCCCT TTTCATTTTG chr21:43728461-43728961 - 68 1.53e-07 AGGCGCAGCC CGCAGTCCTCCTCCCT CGGCCGGTGG chr10:101830525-10183102 + 2 2.49e-07 G CACGCCCCTCCCCCAC ACGCAGGCGT chr22:20203594-20204094 - 4 6.85e-07 AGGAAGCGGT GCAGCCCCTCCTCCCT CTG chr20:53899443-53899943 - 81 7.83e-07 CTGG CTCTGCCCTTCTCCCG TTTCCTATAA chr19:40920940-40921440 + 76 8.94e-07 GTGTGTAAAG CACTTCACGCCTCCCC ACTGGTGCT chr5:137516467-137516967 - 75 1.02e-06 TGTCATTATC CCTGCCCCTCCTCCTG AACTCGCCTG chr16:85626442-85626942 - 62 1.47e-06 GGCACCAGAC CTCAGGCCTGCTCCCT CTGTGCTCTG chr17:55067595-55068095 - 81 1.47e-06 CTAG CCAACTCCTCCTCCTC CTTACCTAAC chr12:124551496-12455199 - 79 1.85e-06 AAACGG CCCGCGCCTCCTTCCC CCAGGCCTCT chr4:77075953-77076453 - 7 1.85e-06 CAACGACTTC CCCAGCCCGTCTCCTT TCGGCC chr1:234612521-234613021 + 12 2.08e-06 GCAGCAGTTA CAGCCGCCTCCTCCAC ACACAGGAGC chr1:174799476-174799976 + 18 2.59e-06 CATGCTCATT CACCTACCTCCTCCTC TTCCCTCCCC chr1:236097025-236097525 - 23 3.57e-06 TCTGAGTCAC CCCTGGCCGCCTGCTC CATTCTGAGT chr15:99434989-99435489 - 23 3.57e-06 TTACAGCTGC CGTTCCCCGCCTTCCC ATTGTGCCTG chr4:118981222-118981722 + 20 3.57e-06 ACGTCAATGT CAATACCCTCCTCCGT GCAACAATCC chr7:155205343-155205843 - 61 3.57e-06 TCCTGACTGC CACTTCCCTGCTGCGC GGCCTCCAGC chr10:74585354-74585854 - 24 3.57e-06 CCGACACAGA GGCTTTCCTGCTCCCC TGAGAGTACA chr15:67150050-67150550 + 76 4.39e-06 CACCTCTCCC CAACCCCCGCCCCCAG TCAGGAATG chr17:48547488-48547988 - 23 5.89e-06 AACCTGAACT CTACGCCCTCCCCCTT CCCCACCACC chr16:12120453-12120953 + 50 5.89e-06 GGACTGGAGG CTGGTCCCTGCTCCAC TGTTGTTTTT chr19:42468361-42468861 - 84 7.11e-06 G CCTGGCCCTGCCCCAT TTAACTACTG chr1:175841770-175842270 - 84 7.80e-06 T CGCTGCCTTCCTGCCT CCCTTCTGCC chr7:91034901-91035401 + 36 8.54e-06 CCTTCCTTAT CAACCCACTTCTCCCT GTCTACCCTC chr19:39138506-39139006 - 5 9.34e-06 TTTCTGGGCA CCCTGCCCGCCCTCCG CCAG chr12:12398134-12398634 - 35 9.34e-06 AGCTCATTCT CACATTCCTTCTCCTG CTCATTTTCC chr18:49006706-49007206 - 18 1.21e-05 ATTAATGGAT CGTTTCCCGCCTGCTG CAGAAGGCGG chr5:174337787-174338287 - 50 1.21e-05 CCTCCCTGCA GACAACCCGGCTGCCC GATAGCACCT chr10:85642759-85643259 + 21 1.21e-05 CCAACCATGA CATAACCCTTCTCCAG TTCTGATACC chr8:108760603-108761103 - 39 1.21e-05 CAAATCATCT CTTTTCCCTTCTGCCT GGCAGATTGG chr3:14439460-14439960 - 44 1.43e-05 GTACTCAGGA GCGAGTCCTCCTCCAC AGGCGTCCCT chr10:129605986-12960648 + 69 1.56e-05 CTGACGTGAG CACATCCTGCCTGCCT GCCTGTCTGG chr13:110965217-11096571 + 84 1.56e-05 tgactcattc cgattacctgctccac c chr12:12266937-12267437 + 75 1.83e-05 GAACTGGGAG GGAAAGCCTCCTCCCG GTGGCGCATT chr5:142360604-142361104 + 65 1.83e-05 ccaactgccc gctctccctgctgcac tgcagtttgt chr2:175806930-175807430 - 67 2.68e-05 CAGAGATTTA CAAGGGACTGCTCCAC GCTAAACCAG chr1:155244568-155245068 - 9 2.88e-05 CGCTCTCTCT CTCTCTCCGGCTCGCC AGCGACAC chr1:46132541-46133041 + 23 3.10e-05 CCCCTTCCAC GCCGTCCCGCCTCGAT GTACCGGGAT chr21:39313506-39314006 - 40 3.57e-05 GAGAGCTGAG CGAGGTTCGCCTCCCC GGGCGGGACA chr1:229230235-229230735 + 15 3.83e-05 GCCAGAATGA CACCATCCGCCTACCT CCTGCTAATT chr15:70089107-70089607 + 11 8.73e-05 cttctttaga catccgactcccccgc agagggaatg -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVCNBCCCTCCTCCMY MEME-9 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr10:624962-625462 1.9e-09 73_[+9]_11 chr1:234723889-234724389 5.2e-09 62_[-9]_22 chr3:194134804-194135304 1.8e-08 1_[+9]_83 chr5:174503858-174504358 9.3e-08 22_[-9]_62 chr21:43728461-43728961 1.5e-07 67_[-9]_17 chr10:101830525-10183102 2.5e-07 1_[+9]_83 chr22:20203594-20204094 6.9e-07 3_[-9]_81 chr20:53899443-53899943 7.8e-07 80_[-9]_4 chr19:40920940-40921440 8.9e-07 75_[+9]_9 chr5:137516467-137516967 1e-06 74_[-9]_10 chr16:85626442-85626942 1.5e-06 61_[-9]_23 chr17:55067595-55068095 1.5e-06 80_[-9]_4 chr12:124551496-12455199 1.9e-06 78_[-9]_6 chr4:77075953-77076453 1.9e-06 6_[-9]_78 chr1:234612521-234613021 2.1e-06 11_[+9]_73 chr1:174799476-174799976 2.6e-06 17_[+9]_67 chr1:236097025-236097525 3.6e-06 22_[-9]_62 chr15:99434989-99435489 3.6e-06 22_[-9]_62 chr4:118981222-118981722 3.6e-06 19_[+9]_65 chr7:155205343-155205843 3.6e-06 60_[-9]_24 chr10:74585354-74585854 3.6e-06 23_[-9]_61 chr15:67150050-67150550 4.4e-06 75_[+9]_9 chr17:48547488-48547988 5.9e-06 22_[-9]_62 chr16:12120453-12120953 5.9e-06 49_[+9]_35 chr19:42468361-42468861 7.1e-06 83_[-9]_1 chr1:175841770-175842270 7.8e-06 83_[-9]_1 chr7:91034901-91035401 8.5e-06 35_[+9]_49 chr19:39138506-39139006 9.3e-06 4_[-9]_80 chr12:12398134-12398634 9.3e-06 34_[-9]_50 chr18:49006706-49007206 1.2e-05 17_[-9]_67 chr5:174337787-174338287 1.2e-05 49_[-9]_35 chr10:85642759-85643259 1.2e-05 20_[+9]_64 chr8:108760603-108761103 1.2e-05 38_[-9]_46 chr3:14439460-14439960 1.4e-05 43_[-9]_41 chr10:129605986-12960648 1.6e-05 68_[+9]_16 chr13:110965217-11096571 1.6e-05 83_[+9]_1 chr12:12266937-12267437 1.8e-05 74_[+9]_10 chr5:142360604-142361104 1.8e-05 64_[+9]_20 chr2:175806930-175807430 2.7e-05 66_[-9]_18 chr1:155244568-155245068 2.9e-05 8_[-9]_76 chr1:46132541-46133041 3.1e-05 22_[+9]_62 chr21:39313506-39314006 3.6e-05 39_[-9]_45 chr1:229230235-229230735 3.8e-05 14_[+9]_70 chr15:70089107-70089607 8.7e-05 10_[+9]_74 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVCNBCCCTCCTCCMY MEME-9 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CVCNBCCCTCCTCCMY width=16 seqs=44 chr10:624962-625462 ( 74) CGCAGCCCTCCTCCCC 1 chr1:234723889-234724389 ( 63) CACCTCCCTCCTCCCT 1 chr3:194134804-194135304 ( 2) CGCCCCCCGCCTCCCT 1 chr5:174503858-174504358 ( 23) CCCCCCCCTTCTCCCT 1 chr21:43728461-43728961 ( 68) CGCAGTCCTCCTCCCT 1 chr10:101830525-10183102 ( 2) CACGCCCCTCCCCCAC 1 chr22:20203594-20204094 ( 4) GCAGCCCCTCCTCCCT 1 chr20:53899443-53899943 ( 81) CTCTGCCCTTCTCCCG 1 chr19:40920940-40921440 ( 76) CACTTCACGCCTCCCC 1 chr5:137516467-137516967 ( 75) CCTGCCCCTCCTCCTG 1 chr16:85626442-85626942 ( 62) CTCAGGCCTGCTCCCT 1 chr17:55067595-55068095 ( 81) CCAACTCCTCCTCCTC 1 chr12:124551496-12455199 ( 79) CCCGCGCCTCCTTCCC 1 chr4:77075953-77076453 ( 7) CCCAGCCCGTCTCCTT 1 chr1:234612521-234613021 ( 12) CAGCCGCCTCCTCCAC 1 chr1:174799476-174799976 ( 18) CACCTACCTCCTCCTC 1 chr1:236097025-236097525 ( 23) CCCTGGCCGCCTGCTC 1 chr15:99434989-99435489 ( 23) CGTTCCCCGCCTTCCC 1 chr4:118981222-118981722 ( 20) CAATACCCTCCTCCGT 1 chr7:155205343-155205843 ( 61) CACTTCCCTGCTGCGC 1 chr10:74585354-74585854 ( 24) GGCTTTCCTGCTCCCC 1 chr15:67150050-67150550 ( 76) CAACCCCCGCCCCCAG 1 chr17:48547488-48547988 ( 23) CTACGCCCTCCCCCTT 1 chr16:12120453-12120953 ( 50) CTGGTCCCTGCTCCAC 1 chr19:42468361-42468861 ( 84) CCTGGCCCTGCCCCAT 1 chr1:175841770-175842270 ( 84) CGCTGCCTTCCTGCCT 1 chr7:91034901-91035401 ( 36) CAACCCACTTCTCCCT 1 chr19:39138506-39139006 ( 5) CCCTGCCCGCCCTCCG 1 chr12:12398134-12398634 ( 35) CACATTCCTTCTCCTG 1 chr18:49006706-49007206 ( 18) CGTTTCCCGCCTGCTG 1 chr5:174337787-174338287 ( 50) GACAACCCGGCTGCCC 1 chr10:85642759-85643259 ( 21) CATAACCCTTCTCCAG 1 chr8:108760603-108761103 ( 39) CTTTTCCCTTCTGCCT 1 chr3:14439460-14439960 ( 44) GCGAGTCCTCCTCCAC 1 chr10:129605986-12960648 ( 69) CACATCCTGCCTGCCT 1 chr13:110965217-11096571 ( 84) CGATTACCTGCTCCAC 1 chr12:12266937-12267437 ( 75) GGAAAGCCTCCTCCCG 1 chr5:142360604-142361104 ( 65) GCTCTCCCTGCTGCAC 1 chr2:175806930-175807430 ( 67) CAAGGGACTGCTCCAC 1 chr1:155244568-155245068 ( 9) CTCTCTCCGGCTCGCC 1 chr1:46132541-46133041 ( 23) GCCGTCCCGCCTCGAT 1 chr21:39313506-39314006 ( 40) CGAGGTTCGCCTCCCC 1 chr1:229230235-229230735 ( 15) CACCATCCGCCTACCT 1 chr15:70089107-70089607 ( 11) CATCCGACTCCCCCGC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVCNBCCCTCCTCCMY MEME-9 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 16 n= 51000 bayes= 11.2046 E= 6.9e-002 -1210 193 -47 -1210 38 31 4 -103 -30 124 -169 -62 -16 18 -11 8 -130 42 42 8 -262 148 -47 -62 -162 201 -1210 -362 -1210 211 -1210 -262 -1210 -1210 53 129 -1210 148 4 -81 -1210 218 -1210 -1210 -1210 -69 -1210 163 -362 172 -28 -203 -1210 211 -228 -1210 -16 118 -169 -62 -1210 104 -28 38 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVCNBCCCTCCTCCMY MEME-9 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 16 nsites= 44 E= 6.9e-002 0.000000 0.840909 0.159091 0.000000 0.363636 0.272727 0.227273 0.136364 0.227273 0.522727 0.068182 0.181818 0.250000 0.250000 0.204545 0.295455 0.113636 0.295455 0.295455 0.295455 0.045455 0.613636 0.159091 0.181818 0.090909 0.886364 0.000000 0.022727 0.000000 0.954545 0.000000 0.045455 0.000000 0.000000 0.318182 0.681818 0.000000 0.613636 0.227273 0.159091 0.000000 1.000000 0.000000 0.000000 0.000000 0.136364 0.000000 0.863636 0.022727 0.727273 0.181818 0.068182 0.000000 0.954545 0.045455 0.000000 0.250000 0.500000 0.068182 0.181818 0.000000 0.454545 0.181818 0.363636 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CVCNBCCCTCCTCCMY MEME-9 regular expression -------------------------------------------------------------------------------- C[ACG][CA][TACG][CGT]CCC[TG][CG]CTCC[CA][CT] -------------------------------------------------------------------------------- Time 2965.52 secs. ******************************************************************************** ******************************************************************************** MOTIF CCTSCCMSTSVGGCMYCTRCYRYSBCAKC MEME-10 width = 29 sites = 9 llr = 191 E-value = 3.7e+001 ******************************************************************************** -------------------------------------------------------------------------------- Motif CCTSCCMSTSVGGCMYCTRCYRYSBCAKC MEME-10 Description -------------------------------------------------------------------------------- Simplified A :22:1:3:::3:::6::23::4::1:6:: pos.-specific C a7:49946242219369::9416649::9 probability G :116:11314489::11:61:3:32:261 matrix T ::7:::1171:::113:81:61412124: bits 2.2 * 2.0 * 1.7 * ** ** * * * * 1.5 * ** ** * * * * Relative 1.3 * ** *** * * * * Entropy 1.1 * *** *** ** ** * * ** (30.6 bits) 0.9 ** *** * *** ** ** ** * ** 0.7 ****** *** ********** ** * ** 0.4 ****** ************** ** **** 0.2 ***************************** 0.0 ----------------------------- Multilevel CCTGCCCCTCGGGCACCTGCTACCCCAGC consensus AAC AGCGAC CT AA CGTGG GT sequence C T T -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTSCCMSTSVGGCMYCTRCYRYSBCAKC MEME-10 sites sorted by position p-value -------------------------------------------------------------------------------- Sequence name Strand Start P-value Site ------------- ------ ----- --------- ----------------------------- chr1:8896728-8897228 + 21 4.90e-16 tgttatcagg cctgcccctggggcacctactaccccatc agtgtaatta chr18:26233286-26233786 - 70 2.00e-15 GG CCTGCCCCTGGGGCACCTACTATCCCATC AGCATAATTA chr3:194134804-194135304 + 71 1.05e-10 acacacacaT CCTCCCGGCCCGGCCGCAGCCGCGGCGGC A chr5:56123665-56124165 - 49 1.46e-10 AATCATGGGC CCTGCCCTTTAGCCCCCTGCTGTGACAGC TGAGGCAGAT chr20:5844274-5844774 + 35 1.46e-10 TTTGACACTC CCACACACTGAGGCACCTGCTGTTTCTGC CCACACTAGG chr17:45247416-45247916 + 7 4.99e-10 GTCCTG CCTCCCACCCGGGCATCTGGCCCCTTTTC CTTTCGCCCT chr15:70196579-70197079 + 63 9.90e-10 TCCCAATTTG CATGCCAGTGACGTACCTTCCACCGCAGG GTGCTTTCC chr15:74546119-74546619 - 10 2.22e-09 GGGGGCAGCC CAGCCGCCTCGGGCCTGAACTTTCCCAGC GCTGTCAGG chr3:195907729-195908229 - 28 2.65e-09 GGGTACGGCA CGAGCCTGGCCCGCTTCTGCCACGCCGTC CTGTCACAGC -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTSCCMSTSVGGCMYCTRCYRYSBCAKC MEME-10 block diagrams -------------------------------------------------------------------------------- SEQUENCE NAME POSITION P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr1:8896728-8897228 4.9e-16 20_[+10]_51 chr18:26233286-26233786 2e-15 69_[-10]_2 chr3:194134804-194135304 1e-10 70_[+10]_1 chr5:56123665-56124165 1.5e-10 48_[-10]_23 chr20:5844274-5844774 1.5e-10 34_[+10]_37 chr17:45247416-45247916 5e-10 6_[+10]_65 chr15:70196579-70197079 9.9e-10 62_[+10]_9 chr15:74546119-74546619 2.2e-09 9_[-10]_62 chr3:195907729-195908229 2.6e-09 27_[-10]_44 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTSCCMSTSVGGCMYCTRCYRYSBCAKC MEME-10 in BLOCKS format -------------------------------------------------------------------------------- BL MOTIF CCTSCCMSTSVGGCMYCTRCYRYSBCAKC width=29 seqs=9 chr1:8896728-8897228 ( 21) CCTGCCCCTGGGGCACCTACTACCCCATC 1 chr18:26233286-26233786 ( 70) CCTGCCCCTGGGGCACCTACTATCCCATC 1 chr3:194134804-194135304 ( 71) CCTCCCGGCCCGGCCGCAGCCGCGGCGGC 1 chr5:56123665-56124165 ( 49) CCTGCCCTTTAGCCCCCTGCTGTGACAGC 1 chr20:5844274-5844774 ( 35) CCACACACTGAGGCACCTGCTGTTTCTGC 1 chr17:45247416-45247916 ( 7) CCTCCCACCCGGGCATCTGGCCCCTTTTC 1 chr15:70196579-70197079 ( 63) CATGCCAGTGACGTACCTTCCACCGCAGG 1 chr15:74546119-74546619 ( 10) CAGCCGCCTCGGGCCTGAACTTTCCCAGC 1 chr3:195907729-195908229 ( 28) CGAGCCTGGCCCGCTTCTGCCACGCCGTC 1 // -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTSCCMSTSVGGCMYCTRCYRYSBCAKC MEME-10 position-specific scoring matrix -------------------------------------------------------------------------------- log-odds matrix: alength= 4 w= 29 n= 43200 bayes= 10.6217 E= 3.7e+001 -982 218 -982 -982 -33 159 -99 -982 -33 -982 -99 125 -982 101 133 -982 -133 201 -982 -982 -982 201 -99 -982 25 101 -99 -133 -982 133 59 -133 -982 1 -99 125 -982 101 101 -133 25 1 101 -982 -982 1 182 -982 -982 -99 201 -982 -982 201 -982 -133 99 59 -982 -133 -982 133 -99 25 -982 201 -99 -982 -33 -982 -982 148 25 -982 133 -133 -982 201 -99 -982 -982 101 -982 99 67 -99 59 -133 -982 133 -982 67 -982 133 59 -133 -133 101 1 -33 -982 201 -982 -133 99 -982 1 -33 -982 -982 133 67 -982 201 -99 -982 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTSCCMSTSVGGCMYCTRCYRYSBCAKC MEME-10 position-specific probability matrix -------------------------------------------------------------------------------- letter-probability matrix: alength= 4 w= 29 nsites= 9 E= 3.7e+001 0.000000 1.000000 0.000000 0.000000 0.222222 0.666667 0.111111 0.000000 0.222222 0.000000 0.111111 0.666667 0.000000 0.444444 0.555556 0.000000 0.111111 0.888889 0.000000 0.000000 0.000000 0.888889 0.111111 0.000000 0.333333 0.444444 0.111111 0.111111 0.000000 0.555556 0.333333 0.111111 0.000000 0.222222 0.111111 0.666667 0.000000 0.444444 0.444444 0.111111 0.333333 0.222222 0.444444 0.000000 0.000000 0.222222 0.777778 0.000000 0.000000 0.111111 0.888889 0.000000 0.000000 0.888889 0.000000 0.111111 0.555556 0.333333 0.000000 0.111111 0.000000 0.555556 0.111111 0.333333 0.000000 0.888889 0.111111 0.000000 0.222222 0.000000 0.000000 0.777778 0.333333 0.000000 0.555556 0.111111 0.000000 0.888889 0.111111 0.000000 0.000000 0.444444 0.000000 0.555556 0.444444 0.111111 0.333333 0.111111 0.000000 0.555556 0.000000 0.444444 0.000000 0.555556 0.333333 0.111111 0.111111 0.444444 0.222222 0.222222 0.000000 0.888889 0.000000 0.111111 0.555556 0.000000 0.222222 0.222222 0.000000 0.000000 0.555556 0.444444 0.000000 0.888889 0.111111 0.000000 -------------------------------------------------------------------------------- -------------------------------------------------------------------------------- Motif CCTSCCMSTSVGGCMYCTRCYRYSBCAKC MEME-10 regular expression -------------------------------------------------------------------------------- C[CA][TA][GC]CC[CA][CG][TC][CG][GAC][GC]GC[AC][CT]C[TA][GA]C[TC][AG][CT][CG][CGT]C[AGT][GT]C -------------------------------------------------------------------------------- Time 3266.51 secs. ******************************************************************************** ******************************************************************************** SUMMARY OF MOTIFS ******************************************************************************** -------------------------------------------------------------------------------- Combined block diagrams: non-overlapping sites with p-value < 0.0001 -------------------------------------------------------------------------------- SEQUENCE NAME COMBINED P-VALUE MOTIF DIAGRAM ------------- ---------------- ------------- chr5:136729942-136730442 3.54e-02 63_[-3(2.68e-05)]_28 chr4:77075953-77076453 3.32e-03 6_[-9(1.85e-06)]_78 chr4:95531085-95531585 7.11e-03 14_[-1(2.28e-06)]_74 chr17:4788342-4788842 4.66e-05 47_[+5(2.26e-11)]_23 chr10:116961503-11696200 2.73e-01 100 chr4:66577844-66578344 4.53e-01 13_[-1(7.54e-05)]_75 chr21:43857415-43857915 2.65e-04 9_[-3(1.45e-05)]_1_[+6(4.35e-08)]_\ 69 chr12:107359339-10735983 3.66e-01 100 chr1:229230235-229230735 9.25e-02 14_[+9(3.83e-05)]_70 chr20:41003508-41004008 2.09e-01 15_[+2(7.04e-05)]_54 chr7:101728152-101728652 4.72e-02 64_[-1(1.51e-06)]_9_[+1(4.57e-05)]_\ 3 chr21:38273694-38274194 7.04e-01 100 chr3:181328905-181329405 4.43e-03 28_[-8(8.64e-08)]_51 chr8:25998511-25999011 8.55e-02 100 chr16:52251431-52251931 7.84e-02 26_[-1(1.60e-05)]_62 chr17:19647186-19647686 2.00e-01 100 chr18:31011380-31011880 4.73e-01 100 chr15:36755233-36755733 6.01e-01 100 chr17:29379377-29379877 3.26e-03 71_[+4(1.26e-07)]_13 chr4:31089732-31090232 5.96e-03 39_[+1(7.54e-05)]_25_[-3(4.31e-05)]_\ 15 chr6:31246018-31246518 4.49e-02 61_[-1(3.55e-05)]_27 chr7:151426368-151426868 2.22e-02 56_[-9(6.46e-05)]_17_[+3(7.23e-06)]_\ 2 chr10:96579978-96580478 6.81e-02 100 chr17:68381059-68381559 4.59e-01 100 chr5:124740954-124741454 3.32e-01 100 chr12:25333744-25334244 2.23e-01 100 chr5:123809705-123810205 2.91e-01 100 chr1:86774461-86774961 7.84e-01 100 chr22:20203594-20204094 1.66e-02 3_[-9(6.85e-07)]_81 chr10:116826680-11682718 5.37e-01 100 chr1:8439105-8439605 8.65e-01 100 chr3:100002819-100003319 9.51e-02 48_[-3(2.68e-05)]_43 chr16:14549595-14550095 2.63e-10 29_[+5(1.23e-14)]_41 chr12:68539302-68539802 6.29e-01 100 chr10:113048361-11304886 2.67e-01 24_[+8(3.15e-05)]_55 chr6:150766142-150766642 1.68e-01 100 chr3:194364923-194365423 6.43e-02 11_[-3(1.45e-05)]_80 chr1:67686594-67687094 4.31e-02 29_[+3(1.45e-05)]_62 chr17:71438664-71439164 3.54e-01 100 chr20:11076300-11076800 2.54e-02 76_[-1(9.33e-06)]_12 chr4:25500971-25501471 1.16e-02 62_[-5(4.58e-05)]_8 chr17:45247416-45247916 6.11e-06 6_[+10(4.99e-10)]_65 chr3:14439460-14439960 3.22e-01 43_[-9(1.43e-05)]_41 chr7:98476741-98477241 8.17e-01 100 chr19:28405773-28406273 3.08e-04 65_[+6(1.76e-07)]_23 chr6:107659021-107659521 4.77e-02 15_[-4(8.95e-08)]_69 chr9:126650661-126651161 2.54e-02 10_[-1(6.71e-05)]_78 chr6:151191402-151191902 5.57e-03 100 chr5:67015616-67016116 4.21e-01 100 chr1:214439402-214439902 2.33e-01 100 chr19:49212077-49212577 2.23e-01 56_[-1(3.98e-05)]_32 chr7:70356162-70356662 4.73e-01 100 chr7:29370458-29370958 2.32e-01 51_[+1(5.96e-05)]_37 chr17:12522729-12523229 7.36e-02 100 chr8:109637924-109638424 4.18e-02 86_[-1(2.35e-05)]_2 chr5:146118274-146118774 5.70e-01 100 chr17:78934174-78934674 6.09e-01 64_[+1(6.71e-05)]_24 chr5:159341857-159342357 1.43e-01 100 chr5:124661290-124661790 3.03e-01 76_[-4(5.79e-05)]_8 chr6:131816075-131816575 1.43e-01 31_[+1(4.03e-06)]_57 chr1:64041759-64042259 1.49e-01 100 chr5:94469756-94470256 7.45e-01 100 chr15:70762215-70762715 9.69e-01 100 chr20:47857903-47858403 1.54e-02 69_[+1(5.30e-05)]_19 chr16:29943926-29944426 3.99e-03 42_[-3(1.45e-05)]_49 chr21:43728461-43728961 3.09e-03 4_[+10(9.19e-05)]_34_[-9(1.53e-07)]_\ 17 chr7:13920052-13920552 4.27e-01 100 chr1:7401839-7402339 1.57e-01 36_[-9(5.70e-05)]_48 chr1:93960683-93961183 2.00e-01 100 chr5:142360604-142361104 2.09e-03 24_[-1(9.26e-05)]_28_[+9(1.83e-05)]_\ 20 chr12:57111970-57112470 1.85e-13 3_[+2(7.26e-06)]_17_[+2(2.80e-19)]_\ 18 chr16:46739986-46740486 7.23e-01 100 chr1:36299872-36300372 1.36e-02 49_[-3(2.27e-05)]_22_[+1(3.55e-05)]_\ 8 chr8:108760603-108761103 2.57e-03 38_[-9(1.21e-05)]_46 chr5:96745722-96746222 8.63e-02 100 chr1:164728675-164729175 8.37e-04 52_[+5(4.91e-05)]_6_[-1(1.18e-05)] chr10:74419545-74420045 6.34e-01 75_[+1(3.14e-05)]_13 chr10:74585354-74585854 1.62e-03 23_[-9(3.57e-06)]_39_[+8(9.63e-05)]_\ 1 chr9:136244268-136244768 1.93e-02 29_[-9(6.88e-05)]_30_[+1(3.55e-05)]_\ 13 chr7:95897498-95897998 2.92e-03 34_[+7(8.55e-08)]_5_[-1(5.30e-05)]_\ 33 chr5:14153731-14154231 5.47e-03 37_[+1(3.55e-05)]_17_[-8(8.46e-05)]_\ 13 chr5:14264660-14265160 1.32e-03 14_[-2(6.76e-08)]_55 chr10:101974357-10197485 9.99e-05 3_[-1(7.54e-05)]_4_[-10(9.83e-05)]_\ 31_[-7(2.94e-07)]_5 chr1:46132541-46133041 2.17e-01 22_[+9(3.10e-05)]_62 chr6:47134630-47135130 1.38e-01 27_[-3(2.27e-05)]_64 chr1:37862304-37862804 3.70e-02 14_[+1(8.34e-05)]_74 chr6:16849349-16849849 2.37e-01 100 chr1:6956321-6956821 2.18e-01 26_[-3(3.08e-05)]_65 chr17:51121803-51122303 7.47e-03 37_[+4(5.30e-05)]_[-3(3.19e-06)]_38 chr20:20211405-20211905 1.95e-02 14_[+3(6.52e-05)]_30_[-1(3.55e-05)]_\ 35 chr13:30108685-30109185 2.26e-02 3_[+1(3.51e-06)]_85 chr20:5844274-5844774 4.85e-08 34_[+10(1.46e-10)]_37 chr1:167658798-167659298 2.18e-04 67_[+4(1.58e-09)]_17 chr17:48577409-48577909 5.61e-02 80_[+1(2.35e-05)]_8 chr8:1976003-1976503 4.15e-04 12_[-3(3.19e-06)]_58_[+7(1.14e-07)]_\ 5 chr6:75605589-75606089 2.00e-01 100 chr1:230104609-230105109 3.36e-02 38_[+3(2.68e-05)]_53 chr1:210236432-210236932 1.81e-01 100 chr3:16482912-16483412 3.30e-01 100 chr20:47264359-47264859 6.96e-02 13_[+1(6.82e-07)]_75 chr15:69145674-69146174 5.31e-01 100 chr6:70385885-70386385 1.66e-02 64_[+1(2.11e-05)]_24 chr15:69194748-69195248 7.57e-02 49_[-1(3.14e-05)]_39 chr1:151210726-151211226 9.65e-01 100 chr10:75508418-75508918 9.38e-01 100 chr12:52580354-52580854 7.72e-03 66_[+1(4.74e-06)]_22 chr8:37594595-37595095 3.15e-01 100 chr5:125257347-125257847 2.29e-01 100 chr4:53943663-53944163 2.12e-01 17_[+9(7.76e-05)]_67 chr1:18618530-18619030 1.78e-01 100 chr17:46101206-46101706 8.83e-04 73_[-3(4.97e-05)]_1_[+6(4.35e-08)]_\ 5 chr3:4986795-4987295 5.49e-01 100 chr6:152272006-152272506 5.87e-03 53_[+1(3.98e-05)]_3_[-1(5.96e-05)]_\ 20 chr1:230103527-230104027 1.90e-02 3_[-7(1.41e-06)]_81 chr11:115476393-11547689 4.64e-02 45_[+2(4.77e-06)]_24 chr2:25009924-25010424 1.12e-03 27_[+3(7.23e-06)]_64 chr1:229221328-229221828 6.35e-01 100 chr10:103504272-10350477 1.14e-01 53_[-3(3.48e-05)]_38 chr13:39159346-39159846 1.10e-01 53_[-1(4.03e-06)]_35 chr22:24380256-24380756 1.35e-01 100 chr3:170203884-170204384 3.08e-01 28_[+3(3.48e-05)]_63 chr1:107767185-107767685 7.32e-01 100 chr2:39492136-39492636 3.70e-01 100 chr10:59606445-59606945 4.45e-02 16_[+5(6.02e-05)]_54 chr19:38862491-38862991 8.21e-01 100 chr21:37370678-37371178 6.60e-01 100 chr10:101442039-10144253 3.20e-14 24_[+4(2.09e-10)]_10_[-2(2.71e-15)]_\ 19 chr1:224067830-224068330 1.89e-02 64_[-1(9.26e-05)]_1_[-9(8.73e-05)]_\ 7 chr2:207683808-207684308 9.09e-02 100 chr8:80331665-80332165 7.62e-01 28_[-4(4.56e-05)]_56 chr1:228861065-228861565 2.40e-01 100 chr11:8768645-8769145 4.72e-02 17_[+1(9.33e-06)]_42_[+1(6.98e-06)]_\ 17 chr14:74140312-74140812 9.28e-01 100 chr16:29714943-29715443 3.84e-01 100 chr1:58779939-58780439 3.33e-02 20_[-3(4.31e-05)]_71 chr17:2611592-2612092 1.14e-02 46_[-1(2.28e-06)]_1_[-2(8.66e-05)]_\ 10 chr15:78033770-78034270 5.28e-03 14_[+1(2.69e-05)]_74 chr1:183060417-183060917 3.93e-02 5_[-3(4.72e-05)]_86 chr5:43422083-43422583 4.11e-03 29_[+1(2.53e-06)]_25_[-4(2.06e-05)]_\ 18 chr10:5548776-5549276 2.23e-01 100 chr7:158097544-158098044 6.38e-01 100 chr15:67106646-67107146 2.72e-01 100 chr18:62784860-62785360 6.19e-03 45_[-2(8.23e-05)]_24 chr5:124735020-124735520 5.96e-01 100 chr3:182697561-182698061 4.24e-01 100 chr20:53611384-53611884 3.51e-06 1_[+2(1.65e-10)]_68 chr14:24982575-24983075 6.03e-01 100 chr1:151494766-151495266 1.37e-04 3_[+7(1.38e-07)]_29_[-3(2.27e-05)]_\ 43 chr5:168939883-168940383 7.71e-01 100 chr8:27603185-27603685 7.15e-01 100 chr10:85642759-85643259 1.36e-01 20_[+9(1.21e-05)]_64 chr8:630774-631274 1.57e-01 2_[-3(1.45e-05)]_30_[-3(1.45e-05)]_\ 37_[-3(1.45e-05)]_4 chr1:8027938-8028438 1.01e-02 28_[+3(2.68e-05)]_2_[-1(2.11e-05)]_\ 49 chr6:52482942-52483442 4.49e-01 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chr1:16122843-16123343 3.00e-01 100 chr17:30263824-30264324 1.46e-05 52_[-5(3.80e-10)]_18 chr10:70378100-70378600 2.16e-05 28_[+8(8.91e-05)]_21_[-3(1.45e-05)]_\ 1_[+6(4.35e-08)]_8 chr10:95288903-95289403 9.91e-02 100 chr1:22342013-22342513 6.88e-06 22_[+1(9.26e-05)]_26_[-8(3.86e-10)]_\ 19 chr10:75283756-75284256 4.43e-01 100 chr7:2408824-2409324 1.18e-01 12_[+1(2.69e-05)]_76 chr14:95256147-95256647 7.45e-02 54_[-3(2.68e-05)]_5_[-1(6.71e-05)]_\ 20 chr17:46279646-46280146 3.12e-04 6_[+4(2.33e-05)]_6_[-1(6.71e-05)]_\ 35_[+3(2.27e-05)]_16 chr12:95545685-95546185 2.82e-03 12_[+1(7.83e-06)]_76 chr7:131897229-131897729 3.51e-01 100 chr6:17035196-17035696 9.74e-01 100 chr1:44485525-44486025 7.46e-02 67_[-1(2.69e-05)]_21 chr15:99434989-99435489 6.97e-04 22_[-9(3.57e-06)]_7_[-1(3.51e-06)]_\ 43 chr6:87808196-87808696 3.97e-01 100 chr17:36721649-36722149 6.35e-01 100 chr17:74514130-74514630 6.03e-01 100 chr1:11178257-11178757 3.81e-01 100 chr5:174482454-174482954 9.50e-02 39_[+1(9.26e-05)]_49 chr13:41774554-41775054 2.60e-01 100 chr3:194350278-194350778 3.62e-01 100 chr19:40831821-40832321 1.79e-01 100 chr15:70833724-70834224 3.84e-02 88_[+3(7.23e-06)]_3 chr14:89912703-89913203 4.39e-02 62_[+1(3.14e-05)]_6_[-7(9.97e-05)]_\ 4 chr12:31749224-31749724 3.31e-01 100 chr20:50366643-50367143 1.07e-01 100 chr14:99821656-99822156 1.32e-01 100 chr1:201721123-201721623 2.14e-02 45_[+6(1.08e-06)]_43 chr10:99667007-99667507 2.89e-01 67_[+3(2.27e-05)]_24 chr15:36951652-36952152 4.54e-01 100 chr10:33264179-33264679 1.01e-02 34_[-3(1.45e-05)]_57 chr12:29754718-29755218 1.09e-01 72_[+1(1.40e-05)]_16 chr5:119270071-119270571 4.29e-02 64_[+1(9.26e-05)]_24 chr12:104220042-10422054 4.38e-01 42_[-1(5.30e-05)]_46 chr10:3852368-3852868 1.82e-01 41_[-1(1.18e-05)]_47 chr7:116810341-116810841 4.53e-01 100 chr8:37073379-37073879 7.28e-01 100 chr17:71632290-71632790 1.55e-01 85_[+1(3.55e-05)]_3 chr18:49656003-49656503 4.24e-01 100 chr10:87845952-87846452 9.21e-02 100 chr22:24727041-24727541 5.96e-02 65_[+3(2.27e-05)]_26 chr13:110965217-11096571 2.63e-03 9_[-3(4.31e-05)]_8_[-3(4.31e-05)]_\ 19_[-3(4.31e-05)]_8_[-3(4.31e-05)]_3_[+9(1.56e-05)]_1 chr7:80876829-80877329 2.63e-02 89_[+3(1.45e-05)]_2 chr3:128735236-128735736 1.97e-02 100 chr5:174531680-174532180 1.64e-03 20_[+3(1.45e-05)]_71 chr10:20885550-20886050 3.02e-02 17_[+1(3.98e-05)]_71 chr7:101880997-101881497 5.67e-01 100 chr5:74632048-74632548 2.63e-01 59_[+3(3.48e-05)]_32 chr8:122994459-122994959 4.35e-01 100 chr6:1630724-1631224 5.56e-02 65_[-1(5.30e-05)]_23 chr6:137853628-137854128 5.14e-01 100 chr15:74546119-74546619 1.24e-06 9_[-10(2.22e-09)]_23_[-2(1.49e-08)]_\ 8 chr17:81583903-81584403 6.43e-01 100 chr12:12266937-12267437 9.95e-03 74_[+9(1.83e-05)]_10 chr7:148772526-148773026 1.19e-02 35_[+3(3.19e-06)]_56 chr17:60173287-60173787 8.08e-01 100 chr5:123814042-123814542 3.31e-03 33_[+3(7.16e-05)]_58 chr22:29914166-29914666 3.06e-02 72_[+7(1.97e-07)]_12 chr8:37479262-37479762 4.81e-04 4_[+8(2.58e-10)]_75 chr1:90831924-90832424 5.95e-02 83_[+1(5.96e-05)]_5 chr15:70569777-70570277 2.15e-05 53_[-1(3.14e-05)]_11_[-3(3.19e-06)]_\ 1_[+6(4.54e-07)]_2 chr5:174410517-174411017 9.61e-03 37_[-1(2.28e-06)]_33_[+3(3.48e-05)]_\ 9 chr1:220119011-220119511 8.38e-03 37_[+8(2.97e-07)]_42 chr8:37392903-37393403 1.23e-01 100 chr10:74691117-74691617 6.36e-02 17_[-1(2.28e-06)]_20_[-1(2.11e-05)]_\ 39 chr20:20215977-20216477 4.52e-01 100 chr8:123026067-123026567 3.55e-01 100 chr15:70526484-70526984 2.40e-03 27_[+10(7.66e-05)]_26_\ [+3(7.23e-06)]_9 chr6:42762324-42762824 8.27e-05 36_[-1(7.54e-05)]_9_[+7(2.31e-05)]_\ 11_[+6(6.89e-07)]_4 chr7:127820246-127820746 7.98e-02 23_[+3(3.48e-05)]_34_[-1(3.14e-05)]_\ 22 chr17:76659811-76660311 1.16e-01 19_[+3(3.19e-06)]_72 chr10:121831732-12183223 3.29e-01 58_[-1(3.14e-05)]_30 chr4:25484208-25484708 1.49e-02 47_[-1(2.86e-07)]_41 chr11:70483066-70483566 1.41e-01 24_[-8(7.24e-05)]_16_[-1(2.69e-05)]_\ 27 chr5:173302372-173302872 5.82e-01 42_[-3(2.68e-05)]_49 chr6:3419765-3420265 8.64e-02 61_[+8(4.46e-05)]_18 chr5:41794431-41794931 3.91e-03 34_[+4(2.83e-05)]_50 chr5:94467916-94468416 7.60e-01 100 chr19:42468361-42468861 3.09e-05 17_[+3(7.23e-06)]_6_[+1(3.14e-05)]_\ 39_[-9(7.11e-06)]_1 chr18:3383365-3383865 2.21e-01 100 chr4:128393141-128393641 4.44e-03 30_[+3(3.19e-06)]_61 chr17:65228849-65229349 9.84e-05 45_[+10(1.36e-07)]_26 chr16:12120453-12120953 4.33e-07 7_[-2(2.50e-09)]_11_[+9(5.89e-06)]_\ 35 chr5:14580389-14580889 1.18e-01 100 chr5:76709699-76710199 7.96e-05 2_[-1(5.92e-06)]_1_[+7(4.90e-06)]_\ 69 chr21:32768439-32768939 1.17e-01 100 chr6:57472811-57473311 3.47e-02 25_[-1(6.82e-07)]_63 chr1:167658597-167659097 1.26e-02 5_[+7(8.87e-07)]_79 chr17:39769874-39770374 1.02e-01 39_[-3(7.23e-06)]_52 chr10:22552798-22553298 1.41e-01 100 chr1:64923118-64923618 3.65e-01 100 chr12:93092121-93092621 5.20e-01 81_[+1(1.88e-05)]_7 chr14:90405703-90406203 7.06e-01 100 chr17:48547488-48547988 3.00e-05 22_[-9(5.89e-06)]_40_[+1(5.92e-06)]_\ 10 chr9:85743180-85743680 1.04e-04 61_[+8(1.41e-09)]_18 chr2:46481458-46481958 1.19e-01 52_[-8(6.52e-05)]_27 chr12:51371375-51371875 2.95e-04 17_[+4(1.62e-05)]_67 chr14:95460892-95461392 2.63e-02 21_[+1(2.69e-05)]_67 chr5:68139561-68140061 7.29e-02 100 chr19:33473588-33474088 1.08e-01 100 chr1:89719661-89720161 5.88e-01 100 chr1:236097025-236097525 1.28e-03 8_[-3(3.19e-06)]_20_[-3(3.19e-06)]_\ 20_[-3(3.19e-06)]_25 chr12:14756693-14757193 5.69e-01 100 chr11:36577875-36578375 1.08e-02 5_[-1(5.96e-05)]_6_[+7(8.02e-05)]_\ 61 chr19:39138506-39139006 1.83e-03 4_[-9(9.34e-06)]_12_[+1(1.88e-05)]_\ 20_[-1(7.54e-05)]_24 chr8:37472393-37472893 3.08e-01 100 chr20:36466972-36467472 1.12e-02 9_[+1(9.33e-06)]_16_[+1(2.53e-06)]_\ 51 chr22:19002379-19002879 2.99e-01 100 chr2:28681601-28682101 3.82e-01 100 chr9:37294199-37294699 3.39e-01 54_[+1(1.88e-05)]_34 chr6:123841154-123841654 3.49e-01 100 chr1:205495384-205495884 8.60e-02 100 chr10:20891188-20891688 2.20e-03 52_[-4(1.27e-05)]_1_[+1(1.40e-05)]_\ 19 chr5:174503858-174504358 1.34e-07 22_[-9(9.32e-08)]_7_[-1(2.69e-05)]_\ 6_[+7(8.28e-05)]_21 chr17:43671274-43671774 1.58e-01 100 chr6:124488038-124488538 4.65e-01 100 chr1:67719335-67719835 1.27e-01 16_[-1(4.57e-05)]_72 chr12:112084152-11208465 4.08e-01 100 chr15:67720496-67720996 2.55e-02 100 chr9:86605294-86605794 8.20e-01 100 chr7:130356155-130356655 1.96e-03 38_[+7(3.44e-07)]_15_[+1(4.57e-05)]_\ 19 chr1:234700125-234700625 3.44e-04 6_[-6(1.39e-05)]_11_[-10(9.71e-06)]_\ 14_[-3(7.23e-06)]_19 chr1:232678500-232679000 2.75e-03 19_[+3(3.19e-06)]_8_[-8(8.46e-05)]_\ 43 chr10:74833274-74833774 8.24e-01 100 chr4:80307258-80307758 3.30e-02 23_[+1(1.18e-05)]_65 chr10:132700552-13270105 5.43e-02 54_[-1(1.40e-05)]_34 chr11:95524341-95524841 1.45e-01 100 chr18:49006706-49007206 5.09e-04 17_[-9(1.21e-05)]_6_[-1(5.30e-05)]_\ 19_[-1(4.03e-06)]_18 chr1:59214670-59215170 3.20e-02 100 chr7:100264542-100265042 4.70e-01 [+1(3.14e-05)]_88 chr10:11539292-11539792 2.75e-01 50_[-1(2.69e-05)]_38 chr5:88516256-88516756 2.42e-01 100 chr7:6077051-6077551 1.13e-02 13_[-4(4.83e-05)]_71 chr9:69090893-69091393 3.96e-13 38_[+7(4.73e-08)]_15_[-2(4.64e-12)] chr12:122368337-12236883 4.23e-01 100 chr1:57963568-57964068 1.18e-01 82_[+1(2.11e-05)]_6 chr18:62445326-62445826 3.54e-05 66_[-7(6.70e-10)]_18 chr1:233112858-233113358 4.60e-01 100 chr21:29217730-29218230 2.86e-02 100 chr20:25252770-25253270 1.88e-02 100 chr9:18976689-18977189 4.88e-04 26_[-7(3.44e-07)]_24_[-3(8.13e-05)]_\ 25 chr10:8543701-8544201 1.32e-01 11_[+1(5.92e-06)]_77 chr1:68331126-68331626 1.08e-01 100 chr1:61254055-61254555 4.35e-01 6_[+1(5.92e-06)]_82 chr20:4972821-4973321 4.63e-01 100 chr5:58925602-58926102 9.97e-02 8_[+1(2.11e-05)]_80 chr6:166351624-166352124 1.05e-02 62_[+4(1.16e-05)]_22 chr10:15635744-15636244 2.88e-02 84_[-1(3.55e-05)]_4 chr5:57042472-57042972 1.46e-03 1_[+4(1.61e-07)]_83 chr12:108822738-10882323 1.51e-01 38_[+1(2.79e-06)]_50 chr1:68217029-68217529 8.47e-01 100 chr10:624962-625462 9.85e-05 73_[+9(1.86e-09)]_11 chr6:134109443-134109943 3.61e-01 79_[+1(8.34e-05)]_9 chr8:28258815-28259315 2.39e-01 100 chr17:49976169-49976669 7.21e-01 100 chr2:11254055-11254555 5.91e-02 84_[-1(1.88e-05)]_4 chr5:83097806-83098306 7.50e-02 31_[-4(8.88e-05)]_53 chr19:34218157-34218657 9.13e-03 74_[+7(6.91e-07)]_10 chr17:44820567-44821067 2.09e-01 100 chr16:15590843-15591343 3.02e-02 73_[+3(4.72e-05)]_18 chr19:13026443-13026943 6.55e-05 5_[+1(5.96e-05)]_65_[+4(2.09e-10)]_\ 2 chr1:85274855-85275355 4.06e-05 4_[-5(2.40e-10)]_66 chrUn_KI270467v1:2913-34 8.35e-01 100 chr15:71455101-71455601 2.12e-02 60_[+1(2.11e-05)]_28 chr6:112218463-112218963 6.56e-02 16_[+1(4.03e-06)]_72 chr17:3890035-3890535 1.72e-01 100 chr1:233241743-233242243 9.74e-01 100 chr13:35814511-35815011 1.37e-01 17_[-4(2.17e-05)]_67 chr10:63692437-63692937 1.38e-12 13_[+2(1.01e-17)]_35_[+1(1.18e-05)]_\ 9 chr6:42896127-42896627 3.98e-01 100 chr15:70013551-70014051 1.53e-01 80_[+1(2.35e-05)]_8 chr14:36835070-36835570 1.36e-04 13_[-8(4.22e-05)]_17_[+4(6.32e-05)]_\ 18_[+3(5.86e-05)]_6 chr10:129605986-12960648 9.72e-05 34_[-6(3.07e-05)]_22_[+9(1.56e-05)]_\ 16 chr16:80996622-80997122 1.88e-01 [+1(3.55e-05)]_88 chr1:151988337-151988837 2.89e-03 74_[+3(7.23e-06)]_17 chr16:80066853-80067353 6.87e-01 100 chr15:70033559-70034059 1.97e-02 100 chr8:42889486-42889986 1.45e-01 100 chr6:168147158-168147658 1.95e-02 23_[-5(3.15e-05)]_47 chr5:175378398-175378898 5.49e-03 34_[-8(9.22e-08)]_45 chr17:55067595-55068095 3.41e-03 61_[-1(3.51e-06)]_7_[-9(1.47e-06)]_\ 4 chr10:75379149-75379649 7.09e-02 68_[-5(7.42e-06)]_2 chr5:6419336-6419836 3.03e-03 86_[+1(7.83e-06)]_2 chr10:116961303-11696180 5.16e-01 100 chr10:74418388-74418888 4.48e-01 58_[-1(7.54e-05)]_30 chr3:136802543-136803043 6.35e-15 44_[-2(7.39e-16)]_4_[-4(5.80e-09)]_\ 5 chr6:15735640-15736140 2.67e-01 100 chr21:33136858-33137358 7.00e-02 100 chr15:70494057-70494557 4.08e-06 60_[+5(6.79e-14)]_10 chr13:112346345-11234684 1.94e-01 100 chr19:38666780-38667280 4.44e-03 12_[-2(6.02e-05)]_17_[+1(3.51e-06)]_\ 28 chr1:39261684-39262184 5.81e-02 100 chr17:78558298-78558798 9.81e-01 100 chr6:11270041-11270541 2.90e-01 50_[+1(6.71e-05)]_38 chr5:38695437-38695937 2.26e-01 100 chr15:70200481-70200981 1.17e-01 29_[+1(4.57e-05)]_59 chr1:180424778-180425278 1.00e-02 16_[+1(7.83e-06)]_72 chr17:48679343-48679843 5.11e-01 15_[-1(3.14e-05)]_73 chr6:21264185-21264685 9.02e-02 100 chr15:83061708-83062208 1.69e-02 4_[+3(7.16e-05)]_87 chr1:155244568-155245068 4.64e-09 16_[-4(6.73e-09)]_17_[-2(8.39e-10)]_\ 2_[-4(2.09e-10)]_2 chr19:28289638-28290138 1.21e-02 45_[-1(1.88e-05)]_43 chr10:71262002-71262502 2.57e-03 20_[+1(3.73e-07)]_49_[-1(3.14e-05)]_\ 7 chr20:21090696-21091196 4.21e-01 100 chr10:68462517-68463017 2.89e-01 100 chr10:75498401-75498901 4.32e-01 100 chr1:233635928-233636428 1.91e-02 100 chr2:26342830-26343330 1.66e-01 2_[-1(6.71e-05)]_86 chr6:41767073-41767573 2.87e-01 100 chr15:65533001-65533501 3.50e-02 100 chr15:69143674-69144174 6.79e-09 23_[+5(3.42e-14)]_47 chr16:22898095-22898595 4.37e-01 100 chr15:84753855-84754355 1.70e-03 3_[+7(5.27e-06)]_26_[-3(7.88e-05)]_\ 46 chr10:117967076-11796757 7.02e-01 100 chr17:34981753-34982253 8.05e-01 100 chr5:73289270-73289770 2.72e-02 41_[-1(5.92e-06)]_47 chr1:234619693-234620193 1.55e-01 100 chr20:46085118-46085618 1.22e-01 100 chr22:38606511-38607011 1.72e-01 42_[-1(3.51e-06)]_46 chr16:25049587-25050087 1.91e-01 100 chr22:46967620-46968120 1.48e-01 24_[-1(3.51e-06)]_22_[-1(3.51e-06)]_\ 30 chr14:26394346-26394846 3.37e-02 51_[+1(9.33e-06)]_15_[+4(5.14e-05)]_\ 6 chr10:28678877-28679377 1.22e-02 26_[+1(4.03e-06)]_62 chr1:244347910-244348410 1.11e-03 3_[+1(3.55e-05)]_43_[+6(3.30e-07)]_\ 30 chr1:26470555-26471055 3.87e-01 80_[+1(4.57e-05)]_8 chr15:50810098-50810598 8.97e-01 100 chr5:124908888-124909388 8.40e-04 [+7(3.15e-05)]_59_[-1(5.30e-05)]_13 chr15:70713864-70714364 2.75e-03 15_[+1(9.32e-07)]_[+2(7.04e-05)]_42 chr5:124656128-124656628 2.16e-01 88_[-1(2.69e-05)] chr19:28425292-28425792 1.01e-04 21_[-8(1.05e-05)]_26_[-1(2.35e-05)]_\ 20 chr1:41870097-41870597 2.44e-06 33_[+3(2.68e-05)]_6_[+4(1.86e-07)]_\ 3_[+1(6.71e-05)]_21 chr12:1217507-1218007 4.40e-03 5_[+7(2.75e-05)]_62_[-1(3.14e-05)]_\ 5 chr17:80671142-80671642 2.96e-02 24_[+1(2.53e-06)]_34_[-1(1.18e-05)]_\ 18 chr8:37302607-37303107 7.34e-01 100 chr14:76486239-76486739 6.05e-02 11_[+1(1.40e-05)]_77 chr5:174514877-174515377 4.30e-01 100 chr16:85626442-85626942 1.83e-05 39_[+1(3.51e-06)]_10_[-9(1.47e-06)]_\ 23 chr10:121310106-12131060 5.70e-01 100 chr6:2028597-2029097 4.16e-04 6_[+8(1.82e-08)]_36_[+1(1.60e-05)]_\ 25 chr12:57010781-57011281 3.36e-01 5_[+1(1.18e-05)]_83 chr5:14428400-14428900 4.27e-01 100 chr1:234723889-234724389 4.69e-15 20_[-4(2.09e-10)]_6_[-4(3.62e-07)]_\ 4_[-9(5.22e-09)]_1_[-4(9.87e-09)]_5 chr11:27796287-27796787 5.60e-03 18_[+1(9.26e-05)]_24_[-1(1.60e-05)]_\ 34 chr17:48492582-48493082 2.08e-03 76_[-8(5.61e-09)]_3 chr17:28926055-28926555 6.80e-02 48_[+1(9.26e-05)]_40 chr1:225425172-225425672 2.66e-01 100 chr1:229893866-229894366 1.29e-01 100 chr1:12478146-12478646 3.08e-01 100 chr6:4139230-4139730 7.56e-02 39_[+3(3.08e-05)]_18_[-2(9.12e-05)]_\ 3 chr1:234534083-234534583 3.00e-02 36_[+1(1.60e-05)]_52 chr9:36891464-36891964 1.76e-02 19_[-1(4.74e-06)]_69 chr2:31008524-31009024 2.24e-01 100 chr19:40920940-40921440 2.93e-03 56_[+3(1.45e-05)]_10_[+9(8.94e-07)]_\ 9 chr21:38985785-38986285 3.23e-01 100 chr19:33639015-33639515 1.78e-02 38_[-1(7.83e-06)]_26_[+1(9.33e-06)]_\ 12 chr5:137516467-137516967 3.49e-04 45_[-4(1.92e-05)]_13_[-9(1.02e-06)]_\ 10 -------------------------------------------------------------------------------- ******************************************************************************** ******************************************************************************** Stopped because requested number of motifs (10) found. ******************************************************************************** CPU: kadru ********************************************************************************