Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 GCCATATGTT
M0178_1.02 10 GGCAGCTGCC
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GGTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 CATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AGTAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATGACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATG
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GCAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCCAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 GCCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTC
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACACTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATCTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 CCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCG
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAGA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 GTGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCAGC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGCCTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAG
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATCCAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GCTAATTGGG
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTGGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GCTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAC
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CGCAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACCGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 CTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAG
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGCCCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGCCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCACAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTC
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GCTAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GGCCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTACT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTC
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CGGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CGTAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTCTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAG
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGCTTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAGA
M6459_1.02 14 AACCACAAACCCCC
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGACGAGAACAATGGGTGC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAGTCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background):
A 0.180 C 0.320 G 0.320 T 0.180


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6413_1.02 PBX2 chr13 - 45464739 45464753 4.5e-08 0.0261 ACATCAATAACTTTA
M6413_1.02 PBX2 chr9 + 137241034 137241048 3.15e-07 0.0701 AAATCAATCATTTGA
M6413_1.02 PBX2 chr10 - 132335809 132335823 5.09e-07 0.0701 TCATAAATCAAATAC
M6413_1.02 PBX2 chr12 - 57079038 57079052 5.18e-07 0.0701 CCATCAATCACACCA
M6413_1.02 PBX2 chr1 - 31645050 31645064 7.2e-07 0.0701 CCATCAATCACTTAG
M6413_1.02 PBX2 chr14 + 23469440 23469454 7.26e-07 0.0701 CCGTCAATCATTTTA
M6413_1.02 PBX2 chr19 - 6737813 6737827 8.87e-07 0.0735 CATTAAATCACATCC
M6413_1.02 PBX2 chr9 + 131373529 131373543 1.23e-06 0.0893 CATTCAATCACGTCC
M6413_1.02 PBX2 chr19 - 8525954 8525968 1.56e-06 0.0972 AAACCAATCAAAATA
M6413_1.02 PBX2 chr9 + 34989416 34989430 1.81e-06 0.0972 GAACCAATAAAATCA
M6413_1.02 PBX2 chr1 - 43650107 43650121 1.85e-06 0.0972 GAGTCAACCAATTCA
M6413_1.02 PBX2 chr5 - 138213658 138213672 2.41e-06 0.117 CATCCAATCACATCA
M6413_1.02 PBX2 chr13 + 45464732 45464746 2.62e-06 0.117 GTAACAATAAAGTTA
M6413_1.02 PBX2 chr14 + 23469407 23469421 3.84e-06 0.159 CAATCAATTATTTGA
M6413_1.02 PBX2 chr14 + 23469651 23469665 4.54e-06 0.167 AAATCTATCAAGTCG
M6413_1.02 PBX2 chr17 + 82367869 82367883 4.68e-06 0.167 tcaacaagcaattta
M6413_1.02 PBX2 chr2 - 26785847 26785861 5.11e-06 0.167 AAATCAACCAATAGA
M6413_1.02 PBX2 chr10 + 99430785 99430799 5.92e-06 0.167 CAAGAAAACAATTTA
M6413_1.02 PBX2 chr10 + 70404038 70404052 6.08e-06 0.167 CCTTCAACAACTTCA
M6413_1.02 PBX2 chr1 + 150697553 150697567 6.08e-06 0.167 AAATAAATAAATATT
M6413_1.02 PBX2 chr19 - 41397660 41397674 6.22e-06 0.167 AAAAAAATCTATCTA
M6413_1.02 PBX2 chr5 + 154038704 154038718 7.31e-06 0.167 GCTTCAATCACTAAA
M6413_1.02 PBX2 chr17 - 82368259 82368273 7.38e-06 0.167 TCATAAGTCAAATAC
M6413_1.02 PBX2 chr14 + 23469403 23469417 8.24e-06 0.167 CTGTCAATCAATTAT
M6413_1.02 PBX2 chr19 - 6425113 6425127 8.4e-06 0.167 CCGTCAATCTAATTC
M6413_1.02 PBX2 chr17 + 40418048 40418062 8.48e-06 0.167 AAACCAATCAGGTTA
M6413_1.02 PBX2 chr1 + 150697557 150697571 9.12e-06 0.167 AAATAAATATTTTTA
M6413_1.02 PBX2 chr6 + 89829553 89829567 9.26e-06 0.167 TATTAAATAAATGAC
M6413_1.02 PBX2 chr5 - 131170949 131170963 9.45e-06 0.167 CAACCAATCAAAGAC
M6413_1.02 PBX2 chr1 + 27914779 27914793 9.92e-06 0.167 AAATCAACCAATCAG
M6413_1.02 PBX2 chr17 + 73232513 73232527 1.01e-05 0.167 TTTCAAATAAATTCA
M6413_1.02 PBX2 chr17 - 76671897 76671911 1.11e-05 0.167 GAACCAATCACTGCC
M6413_1.02 PBX2 chr17 + 43171105 43171119 1.11e-05 0.167 CCACCAATCAATGGC
M6413_1.02 PBX2 chr19 + 10251696 10251710 1.13e-05 0.167 caaaaaaacaaataa
M6413_1.02 PBX2 chr2 - 200525914 200525928 1.16e-05 0.167 TTATCAATCACATGT
M6413_1.02 PBX2 chr10 + 95694038 95694052 1.17e-05 0.167 TCTTCAACCAATCGA
M6413_1.02 PBX2 chr12 + 57694066 57694080 1.21e-05 0.167 CAGCCAATAAAATCA
M6413_1.02 PBX2 chr7 - 112939906 112939920 1.22e-05 0.167 CCACCAATCAGTTTG
M6413_1.02 PBX2 chr9 + 34989532 34989546 1.23e-05 0.167 ACACCAATCACTGCC
M6413_1.02 PBX2 chr12 + 113221109 113221123 1.24e-05 0.167 TCACCATTCAATTTA
M6413_1.02 PBX2 chr16 - 30370771 30370785 1.25e-05 0.167 CCTTCAGTCATATTC
M6413_1.02 PBX2 chr20 - 23358466 23358480 1.27e-05 0.167 AAATGTATCAAATTC
M6413_1.02 PBX2 chr19 - 37317747 37317761 1.33e-05 0.167 CTTTCAGTCAATGGA
M6413_1.02 PBX2 chr1 + 113390246 113390260 1.39e-05 0.167 ACTTCAGTCATTCTA
M6413_1.02 PBX2 chr14 - 54396916 54396930 1.42e-05 0.167 CAACCAATCAGATCC
M6413_1.02 PBX2 chr12 - 121352685 121352699 1.44e-05 0.167 AAAAAAACCACTTTG
M6413_1.02 PBX2 chr19 - 36115185 36115199 1.49e-05 0.167 CCTTCAACCAAGCCA
M6413_1.02 PBX2 chr12 + 119877439 119877453 1.52e-05 0.167 GAGCCAATCAAATTG
M6413_1.02 PBX2 chr12 + 54359290 54359304 1.54e-05 0.167 CGTTAAATCAAGTTC
M6413_1.02 PBX2 chr14 - 103715534 103715548 1.54e-05 0.167 TAGTCAGTCACGTTA
M6413_1.02 PBX2 chr6 + 30720486 30720500 1.55e-05 0.167 AAAAAAATTAAATTT
M6413_1.02 PBX2 chr19 + 17267229 17267243 1.55e-05 0.167 AATCCAATCACATTT
M6413_1.02 PBX2 chrX + 49191038 49191052 1.58e-05 0.167 TTATCAGTCACTTCT
M6413_1.02 PBX2 chr19 - 11155853 11155867 1.66e-05 0.167 GTATCAAAAAATCCA
M6413_1.02 PBX2 chr19 + 38850206 38850220 1.66e-05 0.167 CTTAAAATAAAATCC
M6413_1.02 PBX2 chr19 + 17267261 17267275 1.67e-05 0.167 TAGCCAATCACATTC
M6413_1.02 PBX2 chr9 - 137241160 137241174 1.68e-05 0.167 CCGTCAATCAAGCTG
M6413_1.02 PBX2 chr21 + 33541965 33541979 1.69e-05 0.167 CTACAAATCAGTTTC
M6413_1.02 PBX2 chr17 - 40418034 40418048 1.71e-05 0.167 TATTCAAACAAACCC
M6413_1.02 PBX2 chr19 - 38544148 38544162 1.83e-05 0.167 CAATCAATCATAGAG
M6413_1.02 PBX2 chr17 + 73232522 73232536 1.89e-05 0.167 AATTCAATTATGTCA
M6413_1.02 PBX2 chr19 + 39125540 39125554 1.9e-05 0.167 AAAACAGTCATTTCC
M6413_1.02 PBX2 chr20 + 23358508 23358522 1.92e-05 0.167 tttcaaatcacatca
M6413_1.02 PBX2 chr19 - 42076083 42076097 1.93e-05 0.167 CAACCAATCATTGCC
M6413_1.02 PBX2 chr14 + 54396638 54396652 1.96e-05 0.167 aaaaaaaTCACCTCC
M6413_1.02 PBX2 chr12 - 57693967 57693981 1.97e-05 0.167 ATATCAATCGCTGTC
M6413_1.02 PBX2 chr14 + 54396633 54396647 2.02e-05 0.167 aaaaaaaaaaaaTCA
M6413_1.02 PBX2 chr7 - 100539295 100539309 2.02e-05 0.167 CCTTCAACCACTGCC
M6413_1.02 PBX2 chr21 + 42496611 42496625 2.06e-05 0.167 AAATCCATCACTTTT
M6413_1.02 PBX2 chr19 - 39391222 39391236 2.12e-05 0.167 CCACCAATCACAGAA
M6413_1.02 PBX2 chr17 - 49764528 49764542 2.13e-05 0.167 CCAAAAATTATTTCA
M6413_1.02 PBX2 chr22 - 38705711 38705725 2.18e-05 0.167 CCAACAACAAATGTC
M6413_1.02 PBX2 chr12 - 55973768 55973782 2.2e-05 0.167 CCACCAATAAAATCT
M6413_1.02 PBX2 chr1 + 17054353 17054367 2.23e-05 0.167 ATTTCAACCTCTTTA
M6413_1.02 PBX2 chr19 + 46860230 46860244 2.23e-05 0.167 CCTCCAATCAACTCC
M6413_1.02 PBX2 chr12 + 56360251 56360265 2.24e-05 0.167 CATTCAGTCAAGCCC
M6413_1.02 PBX2 chr9 + 134164743 134164757 2.24e-05 0.167 AAATCTACCACTTTT
M6413_1.02 PBX2 chr17 + 73232517 73232531 2.25e-05 0.167 AAATAAATTCAATTA
M6413_1.02 PBX2 chr6 + 31739748 31739762 2.3e-05 0.169 GCGCCAATCAAATCC
M6413_1.02 PBX2 chr19 + 35648009 35648023 2.43e-05 0.175 gcatgaataaaAGTA
M6413_1.02 PBX2 chr10 - 132335805 132335819 2.45e-05 0.175 AAATCAAATACTTGA
M6413_1.02 PBX2 chr10 - 73744167 73744181 2.5e-05 0.175 GTTCCAGTCACTTTA
M6413_1.02 PBX2 chr19 - 12737180 12737194 2.53e-05 0.175 ACACCAATCACTCTT
M6413_1.02 PBX2 chr1 - 17054380 17054394 2.6e-05 0.175 CAAACAAACAAACAA
M6413_1.02 PBX2 chr6 - 144095890 144095904 2.6e-05 0.175 CAAACAAACAAACAA
M6413_1.02 PBX2 chr6 - 144095894 144095908 2.6e-05 0.175 CAAACAAACAAACAA
M6413_1.02 PBX2 chr19 + 40570879 40570893 2.73e-05 0.18 GCTTAAATCAAGAAA
M6413_1.02 PBX2 chr9 - 128067635 128067649 2.73e-05 0.18 CCACCAATAAAATAG
M6413_1.02 PBX2 chr10 - 118755364 118755378 2.79e-05 0.182 CCTCCAATCACTCTG
M6413_1.02 PBX2 chr17 + 40418262 40418276 2.95e-05 0.188 CTGCCAATCTATTTA
M6413_1.02 PBX2 chr19 + 8390093 8390107 2.96e-05 0.188 CTGTCAATCCATTTC
M6413_1.02 PBX2 chr5 + 32313231 32313245 3e-05 0.189 CCTCCAACCAATCCA
M6413_1.02 PBX2 chr12 + 57078839 57078853 3.04e-05 0.19 CTATCAACCAATGGG
M6413_1.02 PBX2 chr17 + 40418044 40418058 3.1e-05 0.191 GAATAAACCAATCAG
M6413_1.02 PBX2 chr1 + 150697549 150697563 3.19e-05 0.194 CTAAAAATAAATAAA
M6413_1.02 PBX2 chr11 - 62754182 62754196 3.24e-05 0.196 TCTTAAGCCAATTAA
M6413_1.02 PBX2 chr12 + 54324977 54324991 3.36e-05 0.199 CAATCAAACACCTGA
M6413_1.02 PBX2 chr6 - 144095898 144095912 3.37e-05 0.199 TAAACAAACAAACAA
M6413_1.02 PBX2 chr19 + 35775176 35775190 3.41e-05 0.199 aaagaaataaaaata
M6413_1.02 PBX2 chr12 - 103930183 103930197 3.44e-05 0.199 TCTCCAATCAAATGG
M6413_1.02 PBX2 chr17 + 38752720 38752734 3.48e-05 0.199 CTATCAGCCAATGAA
M6413_1.02 PBX2 chr12 - 49323093 49323107 3.5e-05 0.199 CAATCAGCCAATCCG
M6413_1.02 PBX2 chr12 + 121352479 121352493 3.56e-05 0.2 TAACCAATCAGAGCA
M6413_1.02 PBX2 chr17 + 4967537 4967551 3.71e-05 0.205 TAGCCAATCACTGTC
M6413_1.02 PBX2 chr10 - 132335505 132335519 3.76e-05 0.205 CCAACAACCAATAGA
M6413_1.02 PBX2 chr10 - 132335604 132335618 3.76e-05 0.205 CCAACAACCAATAGA
M6413_1.02 PBX2 chr17 + 41787031 41787045 3.87e-05 0.21 GAAAAAACCAATGGA
M6413_1.02 PBX2 chr14 - 95534912 95534926 3.99e-05 0.211 CCACCAATCATGTTG
M6413_1.02 PBX2 chr21 + 33642154 33642168 4.06e-05 0.211 CCATAAACCACGATA
M6413_1.02 PBX2 chr1 - 200410264 200410278 4.14e-05 0.211 CCCTCAACCACTTTC
M6413_1.02 PBX2 chr17 - 49789109 49789123 4.16e-05 0.211 CAGCCAATCAATATG
M6413_1.02 PBX2 chr1 + 200410448 200410462 4.16e-05 0.211 CTTGAAATAAAATTC
M6413_1.02 PBX2 chr10 + 103396439 103396453 4.27e-05 0.211 CCTTCAACGAATGTA
M6413_1.02 PBX2 chr10 - 102245299 102245313 4.29e-05 0.211 TAAAAAACCAATAAA
M6413_1.02 PBX2 chr17 + 73232512 73232526 4.33e-05 0.211 GTTTCAAATAAATTC
M6413_1.02 PBX2 chr12 + 57079019 57079033 4.36e-05 0.211 TCTTCAGTTTATTTA
M6413_1.02 PBX2 chr20 - 50731298 50731312 4.42e-05 0.211 CAACCAATCGATACA
M6413_1.02 PBX2 chr17 + 28041410 28041424 4.5e-05 0.211 aaaaaaaaaaaataa
M6413_1.02 PBX2 chr19 - 10380659 10380673 4.56e-05 0.211 AAAAAAAAAAATCCA
M6413_1.02 PBX2 chr1 + 151790752 151790766 4.64e-05 0.211 TAAACAGCCAATTAC
M6413_1.02 PBX2 chr19 - 10380660 10380674 4.7e-05 0.211 AAAAAAAAAAAATCC
M6413_1.02 PBX2 chr12 - 113221116 113221130 4.7e-05 0.211 GGAACAATAAATTGA
M6413_1.02 PBX2 chr12 - 113221344 113221358 4.7e-05 0.211 CCAACTATCACGTCC
M6413_1.02 PBX2 chr19 + 35757987 35758001 4.74e-05 0.211 CAATCAAACACGCCC
M6413_1.02 PBX2 chr1 + 212285321 212285335 4.76e-05 0.211 TTGTCAGTCAAACTC
M6413_1.02 PBX2 chr17 + 17972701 17972715 4.8e-05 0.211 GAGTCAATCACGCAA
M6413_1.02 PBX2 chr19 + 35757983 35757997 4.8e-05 0.211 TCTCCAATCAAACAC
M6413_1.02 PBX2 chr1 - 161166327 161166341 4.83e-05 0.211 CAATAAAACATTGAA
M6413_1.02 PBX2 chr9 + 134164699 134164713 4.91e-05 0.211 CATTCAATTAATCGT
M6413_1.02 PBX2 chr14 - 23469414 23469428 5.15e-05 0.211 GAGACAGTCAAATAA
M6413_1.02 PBX2 chr16 + 53694 53708 5.2e-05 0.211 CAACCAACCAATAGA
M6413_1.02 PBX2 chr7 - 72828521 72828535 5.22e-05 0.211 ATTTCAATTAAGATC
M6413_1.02 PBX2 chr12 + 54359208 54359222 5.24e-05 0.211 CCATAAATCAGGGCC
M6413_1.02 PBX2 chr12 - 6663136 6663150 5.28e-05 0.211 GTTACAGTCACTTCC
M6413_1.02 PBX2 chr1 - 45491552 45491566 5.38e-05 0.211 TTACCAATCATTTCT
M6413_1.02 PBX2 chrX - 49191129 49191143 5.38e-05 0.211 CAACCAATAAAGGGA
M6413_1.02 PBX2 chr1 - 117060141 117060155 5.45e-05 0.211 CAACCAATCACAGCT
M6413_1.02 PBX2 chr1 + 154982993 154983007 5.45e-05 0.211 CATTAAACAAAACAA
M6413_1.02 PBX2 chr6 - 30720442 30720456 5.47e-05 0.211 AAATAAGTAATTTTT
M6413_1.02 PBX2 chr5 + 139403977 139403991 5.47e-05 0.211 GACTCAATCACGTCC
M6413_1.02 PBX2 chr5 - 138213722 138213736 5.49e-05 0.211 ATATACATCACTTTG
M6413_1.02 PBX2 chr1 + 27914783 27914797 5.52e-05 0.211 CAACCAATCAGAACA
M6413_1.02 PBX2 chr1 + 51878851 51878865 5.52e-05 0.211 CAACCAATCAGAACA
M6413_1.02 PBX2 chr17 + 81239079 81239093 5.52e-05 0.211 CCTCCAATCACTGCG
M6413_1.02 PBX2 chr16 + 30610642 30610656 5.54e-05 0.211 CAGCCAATCACTGAA
M6413_1.02 PBX2 chr1 - 171781580 171781594 5.54e-05 0.211 GTTTCTATCACCTCA
M6413_1.02 PBX2 chr1 + 154983025 154983039 5.56e-05 0.211 ATAACAATTATTTGA
M6413_1.02 PBX2 chr19 + 10251709 10251723 5.66e-05 0.211 aaaaaaacaaaaCCA
M6413_1.02 PBX2 chr17 + 28041419 28041433 5.66e-05 0.211 aaataaataataaaa
M6413_1.02 PBX2 chr6 + 42984396 42984410 5.71e-05 0.211 ACTTCAGCCAATTCT
M6413_1.02 PBX2 chr6 - 43054034 43054048 5.73e-05 0.211 AAATAAATGACGTCC
M6413_1.02 PBX2 chr17 + 58517921 58517935 5.76e-05 0.211 GAACCAATCATATCT
M6413_1.02 PBX2 chr16 + 3003801 3003815 5.78e-05 0.211 aaaacaaacaaaaaa
M6413_1.02 PBX2 chr14 - 23469410 23469424 5.78e-05 0.211 CAGTCAAATAATTGA
M6413_1.02 PBX2 chr22 - 40044820 40044834 5.81e-05 0.211 CTAAAAACAAAATAA
M6413_1.02 PBX2 chr1 + 154983002 154983016 5.83e-05 0.211 AAACAAAACAAAGCA
M6413_1.02 PBX2 chr19 - 7944050 7944064 5.86e-05 0.211 AATCCAATCGAATCC
M6413_1.02 PBX2 chr19 + 19063898 19063912 5.86e-05 0.211 TCGCCAATCACTGTC
M6413_1.02 PBX2 chr19 + 16185112 16185126 5.88e-05 0.211 aaaaaaaTCAAGGAG
M6413_1.02 PBX2 chr3 + 15098768 15098782 5.91e-05 0.211 GAATCAAACACAACC
M6413_1.02 PBX2 chr17 - 42155245 42155259 5.91e-05 0.211 AAAAAAAAAAAGTTC
M6413_1.02 PBX2 chr5 - 111512703 111512717 5.91e-05 0.211 GAATCATTCCATTTA
M6413_1.02 PBX2 chr7 + 100148759 100148773 5.93e-05 0.211 TCACCAATCAACGTG
M6413_1.02 PBX2 chr19 - 10695651 10695665 6.32e-05 0.222 CCAAAAAAAAATTTT
M6413_1.02 PBX2 chr10 - 102245425 102245439 6.35e-05 0.222 TATCCAATCGAATAA
M6413_1.02 PBX2 chr9 + 33473989 33474003 6.37e-05 0.222 TTATCAGTCGATTAC
M6413_1.02 PBX2 chr12 - 116738342 116738356 6.43e-05 0.222 TCAGCAATCACAGCC
M6413_1.02 PBX2 chr17 - 47895998 47896012 6.48e-05 0.222 GCATCAGCCAATTGG
M6413_1.02 PBX2 chr17 + 4967422 4967436 6.51e-05 0.222 CTACCAATCAGACCA
M6413_1.02 PBX2 chr7 - 151028373 151028387 6.54e-05 0.222 ACATCAATCTCACTT
M6413_1.02 PBX2 chr3 - 19947162 19947176 6.65e-05 0.222 CAAACACTCAAGTCC
M6413_1.02 PBX2 chr19 + 10251701 10251715 6.68e-05 0.222 aaacaaataaaaaaa
M6413_1.02 PBX2 chr10 + 99430815 99430829 6.68e-05 0.222 GATGCAACCAATGCA
M6413_1.02 PBX2 chr19 - 10717668 10717682 6.71e-05 0.222 ATAAATATCACTTCG
M6413_1.02 PBX2 chr17 + 76264907 76264921 6.71e-05 0.222 GTTTCAATGAAGTAA
M6413_1.02 PBX2 chr17 - 73232520 73232534 6.74e-05 0.222 ACATAATTGAATTTA
M6413_1.02 PBX2 chr1 - 19660064 19660078 6.77e-05 0.222 AAAACAAAAACTTTT
M6413_1.02 PBX2 chr12 - 121352690 121352704 7e-05 0.226 ACAACAAAAAAACCA
M6413_1.02 PBX2 chr19 + 4402205 4402219 7.03e-05 0.226 CAATTTATAATTTTA
M6413_1.02 PBX2 chr5 + 112976617 112976631 7.03e-05 0.226 CAATAAACAAACGTC
M6413_1.02 PBX2 chr10 - 102152228 102152242 7.06e-05 0.226 AAATCTATAAACTCT
M6413_1.02 PBX2 chr5 - 43313928 43313942 7.21e-05 0.228 ATTCAAATCAAGTAC
M6413_1.02 PBX2 chr9 + 34989421 34989435 7.24e-05 0.228 AATAAAATCAAAGGG
M6413_1.02 PBX2 chr17 - 18315149 18315163 7.27e-05 0.228 TAACCAACCACTGCC
M6413_1.02 PBX2 chr22 - 40044811 40044825 7.27e-05 0.228 AAATAAACAAACTTT
M6413_1.02 PBX2 chr3 - 9649195 9649209 7.42e-05 0.231 GAATCAACAATTACA
M6413_1.02 PBX2 chr7 - 7640654 7640668 7.45e-05 0.231 GTATCTGTCAACTTC
M6413_1.02 PBX2 chr14 - 100376435 100376449 7.48e-05 0.231 CATCCAGTCACGTTC
M6413_1.02 PBX2 chr19 - 14529375 14529389 7.58e-05 0.232 CCATCCACCAATCCA
M6413_1.02 PBX2 chr5 + 179698748 179698762 7.74e-05 0.235 CCAACAGCCACTTCC
M6413_1.02 PBX2 chr19 - 4402200 4402214 7.81e-05 0.235 TTATAAATTGCTTTC
M6413_1.02 PBX2 chr12 - 123233164 123233178 7.81e-05 0.235 CAGCCAATCACTGGA
M6413_1.02 PBX2 chr19 - 38402841 38402855 7.84e-05 0.235 CATAAAAACAACTTC
M6413_1.02 PBX2 chr16 + 3003808 3003822 7.87e-05 0.235 acaaaaaaaaaaTTG
M6413_1.02 PBX2 chr14 + 23469642 23469656 7.9e-05 0.235 TTGTCTATCAAATCT
M6413_1.02 PBX2 chr21 + 36320079 36320093 7.97e-05 0.236 CAGTCAGGCAATTCA
M6413_1.02 PBX2 chr19 - 17267218 17267232 8.04e-05 0.236 GATTAAAAAAATTAG
M6413_1.02 PBX2 chr1 + 150697404 150697418 8.07e-05 0.236 CAGCCAATCAAAGCG
M6413_1.02 PBX2 chr19 - 38544152 38544166 8.17e-05 0.236 ACAGCAATCAATCAT
M6413_1.02 PBX2 chr5 + 43313555 43313569 8.21e-05 0.236 GCTTCTACCAATCAA
M6413_1.02 PBX2 chr13 + 52012155 52012169 8.27e-05 0.236 CTGTCAATCACAGGC
M6413_1.02 PBX2 chr17 + 76671705 76671719 8.27e-05 0.236 TTGTCAATCACTGAG
M6413_1.02 PBX2 chr1 - 5992599 5992613 8.34e-05 0.236 ACGCCAGTCACATTA
M6413_1.02 PBX2 chr5 - 131170953 131170967 8.34e-05 0.236 TCAGCAACCAATCAA
M6413_1.02 PBX2 chr19 + 42396977 42396991 8.41e-05 0.236 ACGTCAGTCACTATC
M6413_1.02 PBX2 chr19 - 10251894 10251908 8.44e-05 0.236 AATTCAGCCAATGAC
M6413_1.02 PBX2 chr17 + 28041409 28041423 8.44e-05 0.236 aaaaaaaaaaaaata
M6413_1.02 PBX2 chr21 + 39312356 39312370 8.58e-05 0.236 CAAAAAATAAAAAGC
M6413_1.02 PBX2 chr12 - 6471006 6471020 8.69e-05 0.236 TCTTCAGTAACTGCC
M6413_1.02 PBX2 chr5 + 146447132 146447146 8.69e-05 0.236 TCACCAATCAACTGG
M6413_1.02 PBX2 chr22 + 35399820 35399834 8.73e-05 0.236 aaaaaaaaaaaacca
M6413_1.02 PBX2 chr12 + 54324973 54324987 8.73e-05 0.236 CTGACAATCAAACAC
M6413_1.02 PBX2 chr1 + 47437796 47437810 8.84e-05 0.236 CCACCAACCACTGCC
M6413_1.02 PBX2 chr15 + 70099903 70099917 8.87e-05 0.236 CAATCTGTCACTACC
M6413_1.02 PBX2 chr1 - 150697556 150697570 8.87e-05 0.236 AAAAATATTTATTTA
M6413_1.02 PBX2 chr12 - 116738379 116738393 8.95e-05 0.236 AAAAAAATCGCGTTC
M6413_1.02 PBX2 chr21 + 39312251 39312265 9.02e-05 0.236 CAATCAACTACTGCG
M6413_1.02 PBX2 chr22 - 40044821 40044835 9.06e-05 0.236 ACTAAAAACAAAATA
M6413_1.02 PBX2 chr1 + 160031868 160031882 9.06e-05 0.236 CAGACTATCACATCC
M6413_1.02 PBX2 chr1 + 200410136 200410150 9.1e-05 0.236 CTGTCAATCACTGGG
M6413_1.02 PBX2 chr5 - 150758692 150758706 9.14e-05 0.236 TAATCTGTCACTTGG
M6413_1.02 PBX2 chr1 + 9539223 9539237 9.17e-05 0.236 CAGTCAGTCACAGCC
M6413_1.02 PBX2 chr5 + 83077640 83077654 9.17e-05 0.236 CTTTAAATAACAAAA
M6413_1.02 PBX2 chr8 + 38996553 38996567 9.25e-05 0.236 CAAACAGCCAATGGA
M6413_1.02 PBX2 chr7 + 151028315 151028329 9.25e-05 0.236 CCTCCAATCACAGTT
M6413_1.02 PBX2 chr19 - 12736949 12736963 9.33e-05 0.236 AAACCAATCATAGAC
M6413_1.02 PBX2 chr12 - 109573576 109573590 9.37e-05 0.236 GAACCAATAAAAATT
M6413_1.02 PBX2 chr21 + 39312352 39312366 9.4e-05 0.236 AAAACAAAAAATAAA
M6413_1.02 PBX2 chr19 + 10251692 10251706 9.44e-05 0.236 aaaacaaaaaaacaa
M6413_1.02 PBX2 chr1 + 11262760 11262774 9.44e-05 0.236 ACCTCAGTCACTTCC
M6413_1.02 PBX2 chr1 - 31645227 31645241 9.44e-05 0.236 CCAGCAATTACGTCA
M6413_1.02 PBX2 chr1 + 19659677 19659691 9.52e-05 0.236 AAAGCAATAAAGCAA
M6413_1.02 PBX2 chr6 - 10747906 10747920 9.64e-05 0.236 CAGAAAATAAAAACA
M6413_1.02 PBX2 chr17 + 28041414 28041428 9.71e-05 0.236 aaaaaaaataaataa
M6413_1.02 PBX2 chr1 + 37931798 37931812 9.71e-05 0.236 CCATCAATCGAAAGC
M6413_1.02 PBX2 chr2 - 26785662 26785676 9.75e-05 0.236 TCCTCAAACATTTTA
M6413_1.02 PBX2 chr19 + 40570883 40570897 9.79e-05 0.236 AAATCAAGAAAGCCA
M6413_1.02 PBX2 chr14 - 89954997 89955011 9.79e-05 0.236 AAATAAATCATGAAC
M6413_1.02 PBX2 chr19 + 13952239 13952253 9.83e-05 0.236 TCACCTATCAGATCA
M6413_1.02 PBX2 chr19 + 4402197 4402211 9.91e-05 0.236 GTAGAAAGCAATTTA
M6413_1.02 PBX2 chr8 - 10840063 10840077 9.91e-05 0.236 ACATCAATAGCTTAG
M6413_1.02 PBX2 chr12 + 55829443 55829457 9.91e-05 0.236 caaaaaaacaaaaaa
M6413_1.02 PBX2 chr5 - 138331705 138331719 9.91e-05 0.236 GCTGCAATCTAGTTA
M6413_1.02 PBX2 chrX + 40580789 40580803 9.95e-05 0.236 TTTTCAATCGCTGCC

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_6 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background --motif M6413_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/fimo_out_6 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/SP2.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResults/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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