Database and Motifs High-scoring Motif Occurences Debugging Information



FIMO - Motif search tool

FIMO version 4.12.0, (Release date: Tue Jun 27 16:22:50 2017 -0700)

For further information on how to interpret these results or to get a copy of the FIMO software please access http://meme.nbcr.net

If you use FIMO in your research, please cite the following paper:
Charles E. Grant, Timothy L. Bailey, and William Stafford Noble, "FIMO: Scanning for occurrences of a given motif", Bioinformatics, 27(7):1017-1018, 2011. [full text]


DATABASE AND MOTIFS

DATABASE /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
Database contains 600 sequences, 300000 residues

MOTIFS /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme (DNA)

MOTIF WIDTH BEST POSSIBLE MATCH
M0085_1.02 10 TCGCCTGAGG
M0104_1.02 11 ATATTAATTAA
M0105_1.02 9 TTTTAATTG
M0108_1.02 11 GATAATATTGA
M0177_1.02 10 GCCATATGTT
M0178_1.02 10 AACAGCTGTT
M0189_1.02 8 GCACGTGA
M0195_1.02 10 ACCATATGGT
M0196_1.02 10 GGCACGTGTC
M0198_1.02 10 AGCCCGTGCG
M0199_1.02 13 TAACGACACGTGC
M0211_1.02 8 GCACGTGT
M0212_1.02 10 GGCACGTGCC
M0214_1.02 9 AACATATGG
M0216_1.02 10 CGCAGCTGTG
M0217_1.02 10 ACCATATGGT
M0300_1.02 10 AATGACGTCA
M0305_1.02 9 GCCACGTGT
M0307_1.02 8 ATACGTTG
M0395_1.02 8 GTACTAAT
M0396_1.02 10 AACGGTAGCA
M0398_1.02 11 AGGAAGTGCAA
M0404_1.02 10 AAGGGGGGCA
M0405_1.02 10 TGGGCGTGGC
M0408_1.02 10 ATGTGCACAT
M0413_1.02 10 GGTGCGGGAC
M0415_1.02 8 ATAACGGT
M0422_1.02 10 CCGGGGGGTC
M0424_1.02 10 TTTGACAGCT
M0428_1.02 8 AGGAGCAC
M0431_1.02 9 ACGGTAGCA
M0432_1.02 9 CGCGCGCAC
M0433_1.02 10 ATCTAGAACA
M0436_1.02 10 TTGTTTATTG
M0437_1.02 9 TATATATAT
M0442_1.02 9 AATGCAGTG
M0443_1.02 10 TGGGCGTGGC
M0594_1.02 9 ATTTGAATT
M0603_1.02 7 TTAGCGG
M0607_1.02 9 GCGTAAATA
M0608_1.02 10 GGGGGCGTAA
M0609_1.02 10 CCCCGCGGCC
M0610_1.02 9 ATCGCGTTA
M0629_1.02 11 AATGTATCAAT
M0630_1.02 10 AATGTATCAA
M0632_1.02 10 AATGTATCAA
M0633_1.02 10 TAATGTATTA
M0635_1.02 13 AACATGTATAAAA
M0714_1.02 10 AACCGGAAGT
M0718_1.02 10 ATGTAAACAA
M0719_1.02 8 GTAAACAA
M0728_1.02 12 AATAAACAAACA
M0736_1.02 8 GTAAACAA
M0737_1.02 10 TATGTAAACA
M0747_1.02 10 AATGTAAACA
M0756_1.02 9 GTAAACAAA
M0887_1.02 9 CCTAATGAG
M0890_1.02 8 GTAATCAA
M0891_1.02 10 TTAATTGGTT
M0892_1.02 10 CCTAATTACC
M0893_1.02 10 GTTAATTAAC
M0894_1.02 8 TTAATTAG
M0896_1.02 8 TTAATTAG
M0897_1.02 10 TTTTATGGGC
M0898_1.02 8 TTACGTAA
M0900_1.02 8 TTAATTGG
M0901_1.02 8 CTTGTCAA
M0905_1.02 9 TTAATTACC
M0906_1.02 10 AATTAATTAG
M0931_1.02 9 TAATTAATT
M0937_1.02 7 TGATACC
M0942_1.02 8 TTGTAATT
M0943_1.02 8 GCTAATTA
M0949_1.02 7 TTAATGA
M0952_1.02 8 TGATACCC
M0958_1.02 7 CTAATTA
M0961_1.02 9 CTAATTGGT
M0969_1.02 9 CCAATCAGC
M0975_1.02 9 TAATTAATT
M0994_1.02 9 ATGATACCC
M0996_1.02 7 GAAATCA
M0999_1.02 9 ATTAATTAC
M1007_1.02 9 TTTATGACC
M1012_1.02 9 TTAATGACC
M1016_1.02 7 GTGATAC
M1018_1.02 7 TAATTAA
M1025_1.02 8 GCCAATTA
M1027_1.02 9 TTAATTACC
M1030_1.02 9 ACCACTTAA
M1034_1.02 7 GCAATTA
M1039_1.02 9 GCTAATTGG
M1049_1.02 10 ATGATACCCC
M1070_1.02 9 TTAATGACC
M1071_1.02 8 TTAATGAC
M1073_1.02 9 TTAATGACC
M1110_1.02 10 GGGCAATAGA
M1125_1.02 10 GCTAATTGGC
M1157_1.02 10 TTTTATGACC
M1163_1.02 9 ATTAATTAC
M1266_1.02 10 GACCGAAACC
M1281_1.02 9 CTTACGCAA
M1358_1.02 9 TAACCCTAG
M1359_1.02 10 GTTTGCGCCA
M1418_1.02 8 TGGTACCA
M1432_1.02 10 ATTGACCTCT
M1458_1.02 10 ACTGACCTCG
M1507_1.02 10 AATTTTGGCT
M1528_1.02 10 CCATGGCAAC
M1529_1.02 10 CCATAGCAAC
M1545_1.02 9 CGTACGTCA
M1581_1.02 10 TTTGCTGACT
M1582_1.02 11 ATATATAATAA
M1583_1.02 8 TTCATTGA
M1589_1.02 10 GCAGAACAAT
M1592_1.02 8 AAAACAAT
M1594_1.02 10 CATTGTTCTT
M1601_1.02 9 ATTGTTCTC
M1605_1.02 10 ATTCATCTTT
M1628_1.02 11 AGGTGTGAAGA
M1668_1.02 12 TCCAAACGAGAT
M1838_1.02 15 CATTGCCTCAGGGCA
M1841_1.02 15 GAACACTCTGTTCTT
M1863_1.02 8 GTAAACAT
M1868_1.02 14 ACAGATAAGAATCT
M1871_1.02 10 TGGGTGGGGC
M1882_1.02 21 AAAGTGAAAGTGAAAGTAAAA
M1884_1.02 15 AGCTAAAAATAGCAT
M1889_1.02 10 AAGCACATGG
M1890_1.02 18 AGAGTGCTGATTGGTCCA
M1906_1.02 11 GGGGGCGGGGC
M1915_1.02 20 GCAAGGCATGATGGGAAATC
M1917_1.02 11 GGTCACGTGGC
M1919_1.02 12 CAAGATGGCGGC
M1925_1.02 11 TATTGTGCAAT
M1926_1.02 9 CAGGTGAGG
M1927_1.02 8 GCCACGTG
M1928_1.02 11 GGGAATTTCCC
M1929_1.02 15 CATGTCTGGGCATGT
M1934_1.02 20 AGGTCAGGGTGACCTGGGCC
M1950_1.02 6 GTGGAT
M1955_1.02 11 TTTCCAGGAAA
M1963_1.02 14 GGGGCCGAGGCCTG
M1968_1.02 11 TCCCTGGGGAC
M1970_1.02 6 TGCCAA
M2065_1.02 15 AGGTCAGGGTGACCT
M2264_1.02 8 GCCATCTG
M2267_1.02 11 TTTTATGGCTT
M2268_1.02 11 TATTGCACAAT
M2270_1.02 11 TAATTTAATCA
M2273_1.02 11 GGGCGGGAAGG
M2275_1.02 13 GAACCAGGAAGTG
M2277_1.02 11 ACAGGAAGTGG
M2278_1.02 11 TGTGACTCATT
M2281_1.02 11 TCCAATCCACA
M2283_1.02 15 CAAAAGTAAACAAAG
M2286_1.02 15 TGGACTTTGGACTCT
M2287_1.02 13 GGCCATAAATCAC
M2289_1.02 13 AAGATGATGTCAT
M2292_1.02 11 GGTGACTCATC
M2296_1.02 15 CTGAGTCAGCAATTT
M2299_1.02 13 AGGGACAGCTGCA
M2301_1.02 15 AAATGGACCAATCAG
M2303_1.02 15 TGACCTCTGACCCCT
M2305_1.02 11 TGCGCAGGCGC
M2306_1.02 13 TTCATTTGCATAT
M2307_1.02 15 AGAAAGTGAAAGTGA
M2310_1.02 15 CAAACCACAAACCCC
M2313_1.02 10 CCATTGTTTT
M2314_1.02 15 GGGAGGGGGCGGGGC
M2319_1.02 14 TTCCTTTGATCTTT
M2321_1.02 20 AGACATGCCCAGACATGCCC
M2323_1.02 15 CAGATCTCGCGAGAG
M2385_1.02 11 AAGTAAACAAA
M2387_1.02 10 GTGGGGTGAT
M2388_1.02 10 ATGGGGTGAT
M2390_1.02 8 CAGGAAGG
M2391_1.02 10 GGGGCGGGGC
M2392_1.02 19 GTTGCCATGGCAACCGCGG
M4344_1.02 8 GGTTGCCA
M4427_1.02 21 GTGGCCACCAGGGGGCGCTGT
M4428_1.02 14 GGAACATTCTGTTC
M4438_1.02 15 AGGTCACGGTGACCT
M4444_1.02 14 AGGGGATTTCCCAG
M4451_1.02 11 GGTCACGTGAC
M4452_1.02 15 TCTCGATATGACTCA
M4453_1.02 15 AAGAGGAAGTGAAAC
M4454_1.02 15 AAATCTCGCGAGAAC
M4459_1.02 20 GTGCGGGGGCGGGGGGGGGG
M4461_1.02 21 GCCTTCTGGGAATTGTAGTTC
M4462_1.02 11 CGCCGGAAGTG
M4463_1.02 18 AATGTGGAAATGAGTCAG
M4467_1.02 15 GTGCCAAAAATAGCA
M4469_1.02 14 TCCATGGTGCTGAA
M4471_1.02 15 GCAGCCAAGCGTGAC
M4473_1.02 15 GCCGGCCAATCAGAG
M4476_1.02 15 TCACCTGTTGCTAGG
M4477_1.02 19 CCATGGCCATATAAGGCAA
M4478_1.02 20 CAGGTGATTTCCGGGAAATG
M4479_1.02 11 GCAGCAGCTGT
M4481_1.02 15 GGTCACGTGGCCCGG
M4484_1.02 15 CTGGGAATTGTAGTC
M4509_1.02 17 ATTTGCATAACAAAGGA
M4511_1.02 8 TGACCTCT
M4522_1.02 10 CCGGAAGTGG
M4525_1.02 15 AGCCTCAGGGCATGG
M4526_1.02 15 GGGGGGTGACTCAGC
M4527_1.02 21 GGACTACAACTCCCAGCAGGC
M4532_1.02 10 CCACGTGCTC
M4536_1.02 15 GGGGAGGGCGCGCGG
M4537_1.02 15 GGCGGGAAATTTGAA
M4543_1.02 11 GGAACCACGTG
M4545_1.02 15 AGAAAGTGAAAGTGA
M4551_1.02 17 TTCATACTGGAGAGAAA
M4553_1.02 10 GGTCACGTGC
M4565_1.02 14 CAGGATGAGTCACC
M4567_1.02 15 GCAAAGTAAACAGAG
M4569_1.02 18 GTCCCGGGTTCGAATCCC
M4572_1.02 15 TGCTGACTCAGCAAA
M4600_1.02 11 GCAGATAAGGA
M4604_1.02 21 GGGGAGGAGGGAGGGGAGGAG
M4612_1.02 15 CCGCCAGGGGGCGCC
M4619_1.02 11 GGGTGACTCAT
M4623_1.02 15 CGGTGACTCATCCTT
M4629_1.02 17 CATGACTCAGCAATTTT
M4635_1.02 15 GAAAATGAAACTGAA
M4636_1.02 21 CTGCCCTCATCCAAGATGGCG
M4640_1.02 15 GGGCGGGGGTCTCGG
M4665_1.02 15 CAGATAAGAATCTGT
M4680_1.02 8 GTCACGTG
M4681_1.02 10 TGCTGAGTCA
M4692_1.02 10 ACTACAACTC
M4698_1.02 15 CTGGACTTTGGACTC
M4702_1.02 8 TGACCTTT
M4708_1.02 10 TATGCAAATA
M4840_1.02 11 AAATGCGCAAC
M4850_1.02 21 TGTTGTGTCCGTGCCATCTGG
M4930_1.02 11 AAATCGTGACT
M4971_1.02 10 GTAACAGCTG
M5116_1.02 9 ACCACCTGT
M5209_1.02 11 GTGGGCGTGGC
M5234_1.02 10 GGTCACGTAC
M5284_1.02 10 GCTAATTAGC
M5287_1.02 13 CTAATTAAATTAA
M5291_1.02 13 TTAATTTAATTAA
M5292_1.02 13 GGATGATGCAATA
M5293_1.02 14 CGATGACGTCATCG
M5294_1.02 10 GTTAAACGGT
M5300_1.02 17 TAATCGGTATTTAATTG
M5302_1.02 14 TGATGACGTCATCA
M5303_1.02 17 TGCTTTCTAGGAATTCA
M5304_1.02 10 ACCATATGGT
M5307_1.02 12 AAACATATGTTT
M5308_1.02 10 ACCATATGTT
M5310_1.02 8 TTAATTGG
M5320_1.02 15 CCCGCATACAACGAA
M5321_1.02 10 AACACGTGTT
M5322_1.02 8 TTTTTATT
M5323_1.02 14 TGATGACGTCACCG
M5325_1.02 14 TGATGACGTGGCAT
M5335_1.02 18 ATCGATAATTTTATCGAT
M5339_1.02 10 GATAATTAGG
M5342_1.02 8 GTAATTGG
M5343_1.02 8 ATAATTAC
M5344_1.02 8 GTAATTGG
M5345_1.02 10 GTTAATCCGC
M5346_1.02 10 GCTAATCCGT
M5348_1.02 13 CTAATCTAATTAA
M5349_1.02 13 CTAATTTAATCAA
M5363_1.02 12 TTTCCCGCCAAA
M5377_1.02 12 AACCCGGAAGTG
M5388_1.02 10 GCTAATTAGC
M5390_1.02 10 GCTAATTGGG
M5394_1.02 10 GTTAATTGGA
M5398_1.02 10 ACCGGAAGTG
M5414_1.02 10 GTTAATTGGT
M5420_1.02 10 ACCGGAAGTA
M5421_1.02 11 AACCGGAAATA
M5422_1.02 10 ACCGGAAGTG
M5425_1.02 15 CCGGAAGCGGAAGTG
M5427_1.02 10 GCTAATTACC
M5428_1.02 10 GCTAATTACC
M5430_1.02 10 ACCACCTGTT
M5435_1.02 14 TCGCTGTGTCATTC
M5445_1.02 14 AGTAAATATTTTTT
M5446_1.02 7 GTAAACA
M5460_1.02 7 GTAAACA
M5471_1.02 14 GTAAACATGTTTAC
M5480_1.02 10 GCTAATTAGT
M5481_1.02 10 GCTAATTGGT
M5487_1.02 10 TATGCGGGTA
M5490_1.02 16 GCTTCGTGGGGGGTCT
M5491_1.02 14 CTTCGCGGGGGGTC
M5493_1.02 8 GTACGTAA
M5497_1.02 17 AACCGGTTTAACCGGTT
M5500_1.02 10 GCTAATCCCC
M5501_1.02 10 CCTAATCCGC
M5502_1.02 10 TTTAATTAGG
M5503_1.02 10 TTTAATTAGT
M5504_1.02 12 TGGCACGTGCCG
M5506_1.02 12 TGGCACGTGCCA
M5509_1.02 10 GGCACGTGTC
M5512_1.02 9 GGTGGGCAT
M5517_1.02 10 ACTAGTTAAC
M5518_1.02 11 TTTTAATTGCT
M5519_1.02 11 TTTTAATTGGT
M5520_1.02 11 TGTTAATTGCT
M5530_1.02 12 TATAATCGTTTT
M5541_1.02 10 GTTAATTACT
M5542_1.02 10 GCTAATTAGT
M5543_1.02 10 CTTAATTAGT
M5544_1.02 10 TTTTTATGGG
M5547_1.02 11 GGTCGTAAAAT
M5551_1.02 9 TTTTATTAC
M5553_1.02 10 CCAATAAAAA
M5555_1.02 10 GTCGTAAAAA
M5557_1.02 9 GTAATAAAA
M5563_1.02 10 GCTAATTAGC
M5567_1.02 13 GAACGTTCTAGAA
M5568_1.02 15 TTCGAAACGTTCGAA
M5571_1.02 10 GACAGGTGTA
M5581_1.02 12 CATGTCATGTAA
M5582_1.02 12 CATGTCATGTAA
M5583_1.02 8 TTAAGTGC
M5584_1.02 13 TTAATCTAATTAA
M5587_1.02 9 ATGACTCAT
M5591_1.02 18 CAAAAAGGGGCGTGGCAT
M5592_1.02 14 AAGGGGGCGTGGCC
M5593_1.02 11 GGGGGCGTGGC
M5594_1.02 13 CTCGACCTAATTA
M5602_1.02 8 TTAATTGG
M5604_1.02 8 TTAATTAA
M5605_1.02 8 TTAATTAA
M5616_1.02 12 GCTATAAATAGC
M5621_1.02 8 CCTGTCAA
M5623_1.02 10 GCTAATTAAC
M5624_1.02 10 AGTAATTAAC
M5627_1.02 10 CACAGGTGTT
M5628_1.02 8 AGGTGTGA
M5631_1.02 10 GTTAATTAGA
M5632_1.02 10 ATCACGTGAT
M5634_1.02 10 ACCACGTGCC
M5635_1.02 10 TTTAATTACC
M5636_1.02 10 AACAGCTGTT
M5637_1.02 18 TAATTGGTTTTTAATTGC
M5643_1.02 12 ACCGTTAAACGG
M5652_1.02 10 GCCATATGGT
M5653_1.02 10 GACATATGTT
M5660_1.02 15 TTGGCACGGTGCCAA
M5662_1.02 15 TTGGCACAGTGCCAG
M5664_1.02 15 TTGGCACCGTGCCAA
M5672_1.02 10 GCTAATTAGC
M5689_1.02 11 AATTTGCTGAC
M5690_1.02 10 AACATATGTT
M5691_1.02 10 ACCATATGTT
M5693_1.02 10 ACCATATGTT
M5697_1.02 14 ATTATTGATTTTTT
M5702_1.02 17 TGCAGTCATGCGTGACG
M5704_1.02 10 TAATCGATTA
M5705_1.02 8 CTAATTAG
M5709_1.02 10 TAATCGATTA
M5711_1.02 17 TGCAGTCATGCGTGACG
M5714_1.02 11 TAATTTAATTA
M5715_1.02 11 TAATTTAATTA
M5717_1.02 9 CTTAATCCC
M5720_1.02 9 CTTAATCCC
M5722_1.02 12 TGACACCTGTCA
M5729_1.02 9 ATTTGCATA
M5735_1.02 13 AAATTAGCATAAT
M5738_1.02 9 ATTTGCATA
M5740_1.02 14 ATGAATAATTAATG
M5743_1.02 16 ATGCATAATTAATGAG
M5744_1.02 9 ATTTGCATA
M5746_1.02 10 ATAATGAGCT
M5750_1.02 13 GGGGGCCTTGAAA
M5753_1.02 12 CAAGACGCCTTA
M5771_1.02 10 GTTAATTGGC
M5772_1.02 8 TTAATTGG
M5777_1.02 16 CGTTGCCATGGCAACG
M5782_1.02 9 GGATAATCC
M5804_1.02 15 GAGCAACAGGTGGTT
M5805_1.02 13 ATGCAACAGGTGG
M5807_1.02 8 TTAATTGG
M5815_1.02 12 ACAATAACATTG
M5825_1.02 15 AACACTACCATTGTT
M5835_1.02 16 AACAATGTTCATTGTT
M5838_1.02 16 AACAATGTGCAGTGTT
M5856_1.02 12 AGTGGGCGTGGC
M5857_1.02 11 ACCCGGATGTA
M5865_1.02 14 AAAAAGAGGAAGTA
M5873_1.02 10 AGGTGTGAAA
M5875_1.02 20 AGGTGTGAAAAAAGGTGTGA
M5880_1.02 19 AGGTGTGAAATTCACACCT
M5882_1.02 20 TTTCACACCTAGGTGTGAAA
M5883_1.02 16 TCACACCTTCACACCT
M5889_1.02 16 GGTGTGAATTCACACC
M5896_1.02 8 AGGTGTGA
M5903_1.02 12 AAAGATCAAAGG
M5932_1.02 10 GTCACGTGAT
M5934_1.02 12 TGACAGCTGTCA
M5935_1.02 12 TGACAGCTGTCA
M5941_1.02 13 CTAATTTAATTAG
M5944_1.02 8 CTAATTAC
M5945_1.02 8 CTAATTAC
M5949_1.02 8 CTAATTAT
M5955_1.02 11 TAATGGCGGAC
M5958_1.02 13 TATGTCGCGATAG
M5959_1.02 17 TTTCGCCTGGCACGTCA
M5962_1.02 12 TTCGGTGGTCGC
M5965_1.02 15 GCACAGCGGGGGGTC
M5967_1.02 19 ATGTTAAATGTAGATTAAG
M5970_1.02 17 GTCGTGTTGTGGGAAAG
M5971_1.02 14 TCGAGGCTAGCCCA
M5972_1.02 17 GAGTATTATGGGATGGA
M5973_1.02 18 AGGTGTTCTGTTAACACT
M5974_1.02 12 GGGTTCGAGGGT
M5976_1.02 17 TTCGTGGCATTTTTCTA
M5977_1.02 10 GTGGGGGGGG
M5979_1.02 12 TGTGGGAAAAGC
M5980_1.02 10 AGGTAGGTAC
M5981_1.02 15 TTTTCAGTGTGTGCA
M5998_1.02 12 GGTGACGTCATT
M6037_1.02 12 TTTGTCATGTAG
M6111_1.02 13 AGAAAGGGTTAAT
M6114_1.02 10 AAAGCAAACA
M6115_1.02 15 CATGTCTGGGCATGT
M6119_1.02 15 AAAAAGAGGAAGTGG
M6123_1.02 15 GGGGTGGGGGAGGGG
M6131_1.02 21 CCGGTTCAAACCGGTTCTGGC
M6139_1.02 9 GCACGCAAC
M6140_1.02 18 ATTGGTTTTATTGGTTAA
M6141_1.02 12 TAATCCAATTAT
M6144_1.02 10 GCCCCCGGGC
M6146_1.02 14 ACGCGCCTCGGGCG
M6147_1.02 22 TTTAATTTGATTTCGATTAATT
M6149_1.02 13 GGTTGGTATTGTG
M6150_1.02 12 GCCTCCCACGCC
M6151_1.02 8 TCACGTGC
M6152_1.02 10 GTGACGTCAC
M6154_1.02 12 TAAGGAAGAAGG
M6155_1.02 12 GTGGTGACGTGG
M6157_1.02 10 TCATTAATTG
M6159_1.02 16 TTCCTAGAAAGCTTTT
M6161_1.02 20 ACCGGGTCACGTGCAGAGGG
M6162_1.02 14 GGGTCACGTGTCCA
M6163_1.02 12 TTTGTTGTGTTC
M6164_1.02 25 ACATAGTGACACCTAGGTGTGAAAT
M6166_1.02 15 ATTATGTTAAATCCC
M6167_1.02 8 ACATAAAT
M6171_1.02 11 AATTGTGCAAT
M6172_1.02 12 AAGATTGCGCAA
M6173_1.02 13 CAGATTGCAAAAT
M6174_1.02 11 AGCCAATCAGC
M6176_1.02 12 TGACCTTTGACC
M6180_1.02 9 GTGACGTCA
M6181_1.02 11 CACTGACGTCA
M6182_1.02 8 CTAATCCC
M6184_1.02 14 AGGGGGATCGATGG
M6185_1.02 7 CGTTGGC
M6186_1.02 11 TGTTACATAAC
M6187_1.02 13 GGGGATTGCATTT
M6188_1.02 8 ATAATTAT
M6189_1.02 10 GATAATTACA
M6191_1.02 10 GGCGCGAAAC
M6192_1.02 10 CGCGCGAAAC
M6194_1.02 10 CGCGCCAAAC
M6196_1.02 13 TAGGGCGCGAAAC
M6197_1.02 9 CGTGACGTC
M6199_1.02 11 GGCGTGGGCGG
M6200_1.02 11 AGAGTGGGTGT
M6201_1.02 11 GGCGGCAGGGC
M6204_1.02 15 TAGCAGGAAGTGAGT
M6205_1.02 14 GGCAAACAGGAAAT
M6206_1.02 11 ATAAGGAAGTA
M6207_1.02 9 ACCGGAAGT
M6208_1.02 12 CCCAGGAAGTGC
M6210_1.02 13 TGCCCACGTGGTG
M6211_1.02 14 CGGGGATACGAAAT
M6212_1.02 13 CCCACGTACGCAC
M6213_1.02 11 ACCGGAAATCC
M6215_1.02 9 TGACCTTGA
M6216_1.02 9 TGACCTTGA
M6221_1.02 11 GCGGGAAGTGG
M6222_1.02 8 CAGGAAGT
M6223_1.02 13 GACAGGAAGTAAC
M6224_1.02 17 GCCACAGGAAGTAACAC
M6225_1.02 16 AAGATAAGATAAGATA
M6226_1.02 10 CAGGAAATAA
M6228_1.02 10 CTGACTCATC
M6234_1.02 13 GCAAAGCAAACAA
M6235_1.02 15 CTTAAGTAAACAACG
M6236_1.02 15 TCTGGCAAAACAAAC
M6237_1.02 9 AAACAAACA
M6238_1.02 11 AAAATAAACAT
M6239_1.02 11 AAAAGTAAACA
M6240_1.02 12 GGCCAATCAGAG
M6241_1.02 10 TAAATAAACA
M6242_1.02 13 TAAACAAAAACAA
M6244_1.02 13 AAAAACAAACAAC
M6245_1.02 16 AAAAAGTAAACAAACC
M6246_1.02 13 AGGTAAACAAACA
M6247_1.02 9 AATAAACAA
M6249_1.02 9 AAACAAATT
M6250_1.02 12 AAATAAACAATG
M6251_1.02 12 TTGTGTTTTTTT
M6256_1.02 9 ACAGATAAC
M6257_1.02 17 TAAGAGATAACTTAGAT
M6258_1.02 7 AAGATAA
M6259_1.02 14 CACATGCGGGTATT
M6262_1.02 11 TGCAGTGATTT
M6263_1.02 10 GCTGTGATTT
M6264_1.02 11 CTGGGTGGTCT
M6265_1.02 11 GTGGGTGGTCT
M6266_1.02 11 CTGGGTGGTCC
M6267_1.02 10 GTGGGGGGTC
M6268_1.02 12 AATGCCAGACGC
M6269_1.02 9 ACTCATTGA
M6270_1.02 20 AGGGACGCAGCTGCTCCCCA
M6271_1.02 13 GGGCTCGTGGCGG
M6272_1.02 16 AGGCCACGTGCCGGAT
M6273_1.02 17 GGGGGCACGTGGCATTA
M6274_1.02 9 GGGTTGCCC
M6275_1.02 12 GCGTACGTGCGG
M6276_1.02 16 GCGCTAGCGGACGTTA
M6277_1.02 13 CTGTTACGTAATC
M6278_1.02 12 TAGGGCTGCAAA
M6279_1.02 7 AAAATAC
M6280_1.02 15 AATAATCGCGAATAT
M6281_1.02 15 GGTTAATTATTAACC
M6282_1.02 14 GTTAATCATTAACC
M6285_1.02 14 TTTATTGATTTTTT
M6287_1.02 14 AGAATGTTCTAGAA
M6289_1.02 12 TCATAAATCATC
M6290_1.02 11 CCAATAAAACC
M6291_1.02 10 CATCCATCAA
M6292_1.02 10 CATTAATCAA
M6293_1.02 15 TCCAATCTATTGATT
M6295_1.02 10 CCATCCATCA
M6296_1.02 13 TGCATCAATCATT
M6297_1.02 10 CATTAATCAA
M6298_1.02 11 GCATTAATCAA
M6299_1.02 15 AAAGTAATAAATCAT
M6300_1.02 14 GGGCATCAATCAAA
M6301_1.02 10 AATTAAAGCA
M6302_1.02 11 TCCCTAATAAA
M6303_1.02 8 TTAATTGA
M6304_1.02 10 CCATTAAACT
M6306_1.02 12 TGTCAGGGGGCA
M6308_1.02 14 GGAAAGTGAAAGCA
M6309_1.02 17 GGAAAGCGAAACTGAAA
M6311_1.02 20 TAAAGGAAAGCCAAAAGTGA
M6312_1.02 10 GAAAGTGAAA
M6313_1.02 15 GAGAAAGTGAAACTG
M6314_1.02 12 GAAAGCGAAACT
M6315_1.02 7 GTTAATG
M6316_1.02 9 CCAGGTGCA
M6321_1.02 17 GGCGGGGAGGTGGGGGC
M6322_1.02 11 CAGGGTGTGGC
M6323_1.02 15 TGCCTGGGTGTGGCT
M6324_1.02 10 TGGGCGGGGC
M6325_1.02 8 GGGGGCGG
M6326_1.02 9 CAGGGGGTG
M6327_1.02 7 CTTTGAT
M6328_1.02 13 CACTTTTAATTAG
M6329_1.02 13 AAAATTAATTAAT
M6330_1.02 21 GTGCTGACCCCGCAGCCTTCG
M6331_1.02 9 TGCTGACGG
M6332_1.02 8 TTGCTGAC
M6333_1.02 7 CATGACT
M6336_1.02 17 GGGGGGGGGAGGGAGGG
M6337_1.02 11 GGGGCCGGAGG
M6338_1.02 17 TACAACAACCTGTTCTT
M6339_1.02 7 CTCCGGG
M6342_1.02 12 GCTAAAAATAGC
M6343_1.02 13 CGTAAAACTGTCA
M6344_1.02 13 TGACAGCTGTCAA
M6345_1.02 10 ATCACATGAC
M6346_1.02 19 CCACGGCGGTGTCACATGC
M6347_1.02 7 TAATTGT
M6348_1.02 17 AGTGCCGTGTGCAAAAC
M6349_1.02 10 TCAACCTGCA
M6350_1.02 7 CAGTTGG
M6352_1.02 8 CCACGTGG
M6353_1.02 7 GCAGCTG
M6354_1.02 9 GACAGCTGC
M6355_1.02 13 TGACAGCTGCTGC
M6356_1.02 9 GGTGGGGAA
M6357_1.02 8 TTTAATGG
M6358_1.02 12 CGGCAGATGGCC
M6359_1.02 7 AATGACT
M6360_1.02 12 CATGACTCAGCA
M6361_1.02 13 ATGGAAATTTCCA
M6363_1.02 9 AATTTTCCA
M6364_1.02 9 AGTTTTCCA
M6365_1.02 10 AAATTTTCCT
M6366_1.02 15 CATGGAGTTTTCCAC
M6368_1.02 14 ATGCATTACATAAC
M6370_1.02 11 GGAATCTCCCT
M6373_1.02 14 CAGCCAATCAGCGC
M6374_1.02 10 CTCAAGTGCT
M6375_1.02 12 AAACCACTTAAA
M6376_1.02 7 TCAAGTG
M6377_1.02 9 TTCAAGGAC
M6378_1.02 13 AATAAGTATATAA
M6379_1.02 11 AGTTAAGTGGA
M6380_1.02 9 CTAATTGGT
M6381_1.02 10 TCTCCCACGC
M6382_1.02 14 TCTGACCTACTTTT
M6383_1.02 19 CGTTGACCTTTGACCTTTA
M6384_1.02 14 AGGTCATTGACCCT
M6385_1.02 19 CTGAACTTTTTTGACCTCA
M6387_1.02 18 CTGAACTTTCCTGACCCC
M6389_1.02 13 CTGACCTCTGGCC
M6391_1.02 14 TGACTTTTGACTTT
M6392_1.02 18 TCAAGTGAACTTTGTCCT
M6393_1.02 9 GTGACCTTT
M6394_1.02 9 GTGACCTTT
M6395_1.02 10 CTGACCTTTG
M6396_1.02 10 TGGCCTTGAA
M6397_1.02 13 TGACCTTGAACTT
M6399_1.02 21 GTCTTGTTATTGATTTTTTTT
M6400_1.02 8 CTAATCCT
M6401_1.02 15 CTTTAATCCCTTAAC
M6402_1.02 9 TGTAACTGT
M6406_1.02 18 GTTCAGTCATGCGTGACA
M6410_1.02 11 TCAAGCGTGAA
M6411_1.02 14 GTCACTGAAGCGGG
M6412_1.02 15 CCCATCAATCAAATT
M6413_1.02 15 CCATCAATCAATTTA
M6415_1.02 9 CTAATTACC
M6416_1.02 11 TCTGTGGTTTG
M6417_1.02 13 ATATATTCATGAG
M6418_1.02 10 TTTAATCCCA
M6419_1.02 13 CATCAATCAAGCT
M6420_1.02 17 GGGGGCATCAGGAGGGG
M6422_1.02 10 CGGGGGGCCC
M6423_1.02 9 ATTTGCATA
M6425_1.02 14 TTTGCATTACAATG
M6426_1.02 10 CATAAATAAT
M6427_1.02 13 CAGCTCATTAATA
M6429_1.02 13 CATAATTTATGCA
M6430_1.02 7 TGACCTT
M6432_1.02 14 TGACCTTTGTCCTA
M6433_1.02 18 GTGACCTTTGACCTACTT
M6436_1.02 13 TACAGACTGTTCT
M6438_1.02 15 GAGTAATTAATATAA
M6439_1.02 7 TAATCTG
M6440_1.02 7 TTAATTG
M6441_1.02 21 GGACAGCTGTTCTGTTTCCTG
M6442_1.02 17 CCCTGCCCCCCCCTTCC
M6443_1.02 7 TGACCTC
M6445_1.02 11 GCCCTGACCTC
M6446_1.02 20 GTGACCTCTGGGTGACCCCC
M6448_1.02 12 GGGGGATTTCCC
M6449_1.02 12 TGGGGATTTCCC
M6451_1.02 12 GTTGCCAGGGAA
M6453_1.02 14 TTACCATGGCAACC
M6454_1.02 12 TGACCTAGTTTT
M6455_1.02 13 CTGACCTACTTTT
M6456_1.02 22 GGGGGGGGGGGTGGTTTGGGGT
M6457_1.02 10 TAACCACAGA
M6459_1.02 14 AACCACAAACCCCA
M6461_1.02 10 TGTGACCTCA
M6462_1.02 13 GTGACCTTTGACC
M6463_1.02 12 AGCCTGTCTGCC
M6464_1.02 11 GTGTCCGTCTG
M6465_1.02 10 GTGTCTGGCC
M6466_1.02 9 TGTCTGGCC
M6468_1.02 8 CCAGGTGG
M6469_1.02 7 CCAGGTG
M6470_1.02 7 TCTTTGT
M6471_1.02 8 CATTGTTC
M6472_1.02 7 CATTGTT
M6473_1.02 18 CAACAATCTTCATTGTCC
M6474_1.02 19 GGAAAAGAACAATGGGTTC
M6475_1.02 16 ATTTGCATAACAATGG
M6476_1.02 12 GAGAACAAAGCG
M6477_1.02 8 TAACAATA
M6478_1.02 11 AGAACAATGGG
M6482_1.02 20 GGGGGGGGGCGGGGCCGGGG
M6483_1.02 24 GGGGCCAGGGGGGGGGCGGGGCCG
M6485_1.02 12 AAAAAGAGGAAG
M6486_1.02 16 CGGCTGTTACCCTGGG
M6490_1.02 9 AAAACAAAA
M6491_1.02 12 TTTCCAGGAATT
M6492_1.02 13 TTTTCTGGGAATT
M6496_1.02 13 TTTCCCAGAAAAG
M6497_1.02 13 TTCCCAGGAATTT
M6498_1.02 9 TGACCTTGA
M6499_1.02 9 CGTGGGAAA
M6500_1.02 12 GACCATCTGTTC
M6503_1.02 25 GTCGCTTCTCACACCTCTGATGGCA
M6504_1.02 24 AGGTAGAGAATTAGGTGATAAAAA
M6505_1.02 8 AGGTGTGA
M6506_1.02 12 GCGCTTTGTTCT
M6507_1.02 14 CACATTCCTGCGCC
M6508_1.02 15 GATATTTCTGCTCTA
M6509_1.02 12 AAAAATAGCCCT
M6510_1.02 14 TGTTTATGTAAATG
M6513_1.02 11 GCCAGCTGCGG
M6514_1.02 16 GCCTGAACTGGCCAGA
M6515_1.02 14 AAATGGCGGGAAAC
M6516_1.02 11 GACCATCTGGT
M6517_1.02 10 GGTCATGTGG
M6518_1.02 9 GGTCACGTG
M6519_1.02 16 CAGGTGACACCTGACA
M6521_1.02 10 CTGACCTGAG
M6523_1.02 17 TGACCTGACCTGACCTC
M6525_1.02 11 CGCCAAGGAGC
M6527_1.02 10 CCCCAGGTGG
M6529_1.02 7 TCTCTGG
M6532_1.02 7 TGACCTC
M6534_1.02 11 TTAGCTAATTA
M6535_1.02 13 GCGGGGGCGGGGG
M6536_1.02 12 GACGTGTCATTA
M6537_1.02 11 GGGGATTGGCC
M6539_1.02 22 CGGAGAGGGGGAGGGGGGGGGC
M6540_1.02 15 CAATAGCGGTGGTGG
M6542_1.02 13 AGATGATAGAGCC
M6544_1.02 12 GGGGATTTCCCA
M6545_1.02 14 GGTAGGGAAACCCC
M6546_1.02 11 ATTAATAATTA
M6547_1.02 19 GGGGGCCCCAGGCCTCGGC
M6548_1.02 9 GGGGTGGTC
M6549_1.02 9 GGGGTGGTC
M6550_1.02 9 TGGGTGGTC
M6552_1.02 15 GGGGTGGGGGAGGGG
M6553_1.02 12 GAGGGGGGCGGA
M6554_1.02 14 TCCAGATGTTTCGG
M6555_1.02 9 CGATAATGA
M6556_1.02 24 GGGCAACAAATCCCTGCGCCCCGT
M6557_1.02 12 GGAAAAAGTCGG
M6558_1.02 15 GCACCCTTGGGTGCC
M6559_1.02 16 CCCACGGTTACTGCCG

Random model letter frequencies (/srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background):
A 0.226 C 0.274 G 0.274 T 0.226


SECTION I: HIGH-SCORING MOTIF OCCURENCES

Motif ID Alt ID Sequence Name Strand Start End p-value q-value Matched Sequence
M6432_1.02 PPARD chr10 + 84291361 84291374 1.2e-07 0.0693 TGACCTGTCTCCTA
M6432_1.02 PPARD chr6 - 32105612 32105625 2.87e-07 0.0831 TGACCTTGGTCCTG
M6432_1.02 PPARD chr11 - 57885406 57885419 2.13e-06 0.147 TCACCTTTTCCCTA
M6432_1.02 PPARD chr19 - 7563133 7563146 2.15e-06 0.147 TGAACTTTCCCCTA
M6432_1.02 PPARD chr20 + 36384128 36384141 2.38e-06 0.147 TGACCTTTGAGCTG
M6432_1.02 PPARD chr10 + 101081134 101081147 3.32e-06 0.147 TGTCCTTGGTCCTG
M6432_1.02 PPARD chr5 + 176804120 176804133 3.32e-06 0.147 tgtCCTTGGTCCTG
M6432_1.02 PPARD chr17 - 28373916 28373929 3.32e-06 0.147 TGTCCTTGGTCCTG
M6432_1.02 PPARD chr6 - 38229943 38229956 3.32e-06 0.147 TGTCCTTGGTCCTG
M6432_1.02 PPARD chr20 - 60589795 60589808 3.32e-06 0.147 TGTCCTTGGTCCTG
M6432_1.02 PPARD chr10 - 94066580 94066593 3.32e-06 0.147 TGTCCTTGGTCCTG
M6432_1.02 PPARD chr11 - 113474500 113474513 3.32e-06 0.147 TGTCCTTGGTCCTG
M6432_1.02 PPARD chr3 - 124217715 124217728 3.32e-06 0.147 TGTCCTTGGTCCTG
M6432_1.02 PPARD chr20 + 37627381 37627394 3.57e-06 0.147 TGACATTTCCCCTA
M6432_1.02 PPARD chr19 - 42203814 42203827 5.67e-06 0.218 TGACCCTTCCCCTG
M6432_1.02 PPARD chr2 - 25342693 25342706 6.04e-06 0.218 CGACCTTGGCCCTG
M6432_1.02 PPARD chr15 + 63870488 63870501 9.45e-06 0.302 TGATCTTGGCCCTA
M6432_1.02 PPARD chr17 - 36777446 36777459 9.83e-06 0.302 TGACCTCTCTTCTG
M6432_1.02 PPARD chr5 + 141883773 141883786 1.05e-05 0.302 TGACCCCTGCCCTA
M6432_1.02 PPARD chr19 - 7509850 7509863 1.08e-05 0.302 AGACCTTTCTCCTC
M6432_1.02 PPARD chr2 - 41837139 41837152 1.11e-05 0.302 TGACCTTGGACCAA
M6432_1.02 PPARD chr1 + 169595946 169595959 1.15e-05 0.302 TGTCCATTGTCCTG
M6432_1.02 PPARD chr20 - 38686269 38686282 1.37e-05 0.302 TGACATTTTTCCCA
M6432_1.02 PPARD chr2 - 216372588 216372601 1.38e-05 0.302 TGGCCTTTCTCCTT
M6432_1.02 PPARD chr3 + 46705432 46705445 1.44e-05 0.302 TGGCCTTGGTCCTG
M6432_1.02 PPARD chr16 - 67185514 67185527 1.44e-05 0.302 TGGCCTTGGTCCTG
M6432_1.02 PPARD chr20 - 44780108 44780121 1.55e-05 0.302 TGACCATTGACCTT
M6432_1.02 PPARD chr6 - 109978528 109978541 1.59e-05 0.302 AGACCTGTCCCCTG
M6432_1.02 PPARD chr20 + 48523292 48523305 1.78e-05 0.302 TGGCCTTTGTTCTA
M6432_1.02 PPARD chr19 + 29329628 29329641 1.87e-05 0.302 TGACCTCTGCACCA
M6432_1.02 PPARD chr10 - 100681137 100681150 1.93e-05 0.302 TGACCTGGGGCCTC
M6432_1.02 PPARD chr10 + 98056182 98056195 1.94e-05 0.302 tgtcctctgaccca
M6432_1.02 PPARD chr20 + 58048442 58048455 2.04e-05 0.302 TTACCTGTCTCCTC
M6432_1.02 PPARD chr4 - 5928426 5928439 2.31e-05 0.302 TGACCTGGAACCCA
M6432_1.02 PPARD chr10 + 92387508 92387521 2.35e-05 0.302 TATCCTTGGTCCTG
M6432_1.02 PPARD chr9 - 98710764 98710777 2.4e-05 0.302 TGTCCTTTGGACCA
M6432_1.02 PPARD chr19 - 55437769 55437782 2.44e-05 0.302 TGACCCTGGCCCTG
M6432_1.02 PPARD chr1 - 22611892 22611905 2.48e-05 0.302 TCACCTTGCCCCTG
M6432_1.02 PPARD chr5 - 133566062 133566075 2.5e-05 0.302 TGTCCTCTGAACTA
M6432_1.02 PPARD chr19 - 8966235 8966248 2.65e-05 0.302 TGACATTGCCCCTA
M6432_1.02 PPARD chr6 + 33812960 33812973 2.65e-05 0.302 TTCCCTTTTCCCTA
M6432_1.02 PPARD chr15 + 73823197 73823210 2.66e-05 0.302 TGTCCTTGGTACTG
M6432_1.02 PPARD chr12 + 125195095 125195108 2.7e-05 0.302 TGGCCTTGTTCCTG
M6432_1.02 PPARD chr17 + 47785958 47785971 2.9e-05 0.302 TGACATATGGCCTA
M6432_1.02 PPARD chr1 - 230426773 230426786 2.93e-05 0.302 TGACCTCGGGCCCG
M6432_1.02 PPARD chr1 - 241323889 241323902 2.97e-05 0.302 TTACCATTTGCCTA
M6432_1.02 PPARD chr1 - 5847367 5847380 2.99e-05 0.302 TCGCCTTTGTCCTG
M6432_1.02 PPARD chr20 - 60589822 60589835 3.02e-05 0.302 TGTCCTTGGTTCTA
M6432_1.02 PPARD chr10 - 49762445 49762458 3.08e-05 0.302 CGACCTCGGGCCTG
M6432_1.02 PPARD chr19 - 27794859 27794872 3.18e-05 0.302 TGACCTTTTCCGCG
M6432_1.02 PPARD chr17 - 47785871 47785884 3.24e-05 0.302 TGACCTGGGGTCTA
M6432_1.02 PPARD chr10 - 132294849 132294862 3.24e-05 0.302 GGACCTGTGGCCTG
M6432_1.02 PPARD chr9 - 137046796 137046809 3.27e-05 0.302 TGCCCATTGTCCTG
M6432_1.02 PPARD chr21 - 45894447 45894460 3.44e-05 0.302 TACCCTTTCACCTG
M6432_1.02 PPARD chr3 + 62529588 62529601 3.56e-05 0.302 TCACCTCTATCCTT
M6432_1.02 PPARD chr20 - 44780387 44780400 3.71e-05 0.302 CCACCTCTGCCCTA
M6432_1.02 PPARD chr12 - 67193857 67193870 3.71e-05 0.302 TGCCCTGTCTCCTT
M6432_1.02 PPARD chr1 + 1334973 1334986 4.28e-05 0.302 TGCCCTTTGCCCAG
M6432_1.02 PPARD chr9 - 135077589 135077602 4.28e-05 0.302 TGACCAGGGTCCTG
M6432_1.02 PPARD chr12 - 116858236 116858249 4.31e-05 0.302 TGTCCATGGTCCTA
M6432_1.02 PPARD chr10 - 123615048 123615061 4.41e-05 0.302 TCACCTGGATCCTG
M6432_1.02 PPARD chr10 - 101080970 101080983 4.56e-05 0.302 TGTCCTTAATCCCA
M6432_1.02 PPARD chr1 - 114154972 114154985 4.64e-05 0.302 AGACCTTTCTCCCT
M6432_1.02 PPARD chr19 + 41696332 41696345 4.75e-05 0.302 tgacctctctgctc
M6432_1.02 PPARD chr9 + 98710670 98710683 4.78e-05 0.302 TTTCCTTTTCCCCA
M6432_1.02 PPARD chr17 - 29594113 29594126 4.78e-05 0.302 TGACCTATGGCCCC
M6432_1.02 PPARD chr17 + 74610304 74610317 4.86e-05 0.302 tgtccttggttctg
M6432_1.02 PPARD chr10 - 58176188 58176201 4.86e-05 0.302 TGTCCTTGGTTCTG
M6432_1.02 PPARD chr19 - 33684386 33684399 4.99e-05 0.302 TGGCCTGGGTCCTG
M6432_1.02 PPARD chr9 + 126082885 126082898 5.1e-05 0.302 TGTCCGTTGTCCTG
M6432_1.02 PPARD chr6 - 89895418 89895431 5.1e-05 0.302 AGTCCTTTTTCCCA
M6432_1.02 PPARD chr1 + 1299243 1299256 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr1 + 22611661 22611674 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr19 + 43789258 43789271 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr19 + 49987235 49987248 5.25e-05 0.302 tgtcctTGGTGCTG
M6432_1.02 PPARD chr19 + 55217138 55217151 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr11 + 61567394 61567407 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr15 + 66004848 66004861 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr17 + 79608135 79608148 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr17 + 80441272 80441285 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr1 + 110542893 110542906 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr1 + 110746861 110746874 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr1 - 7075512 7075525 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr19 - 11528624 11528637 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr10 - 26367998 26368011 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr20 - 31968555 31968568 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr20 - 31968591 31968604 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr21 - 33157563 33157576 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr19 - 45952732 45952745 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr20 - 46230844 46230857 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr12 - 52741561 52741574 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr3 - 54188345 54188358 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr10 - 59177516 59177529 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr15 - 74291651 74291664 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr16 - 89926505 89926518 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr10 - 98056066 98056079 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr5 - 175322114 175322127 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr3 - 192514139 192514152 5.25e-05 0.302 TGTCCTTGGTGCTG
M6432_1.02 PPARD chr1 + 232085057 232085070 5.28e-05 0.302 CGACCTGTGATCTG
M6432_1.02 PPARD chr5 - 146340824 146340837 5.3e-05 0.302 TCACCCTTTGCCTA
M6432_1.02 PPARD chr6 - 106927902 106927915 5.34e-05 0.302 TGACCTTTTTAATA
M6432_1.02 PPARD chr1 + 151829295 151829308 5.44e-05 0.302 TTTCCTGTTGCCTG
M6432_1.02 PPARD chr10 - 69568174 69568187 5.49e-05 0.302 TGAGCTTTGGCCTC
M6432_1.02 PPARD chr5 - 57306 57319 5.54e-05 0.302 TGACCTCTACCTTA
M6432_1.02 PPARD chr1 - 94100928 94100941 5.64e-05 0.302 TCACCTGTCTTCTA
M6432_1.02 PPARD chr19 + 39599496 39599509 5.7e-05 0.302 tgccctctctcctc
M6432_1.02 PPARD chr19 + 39599281 39599294 5.75e-05 0.302 TGTCCTTGTCCCTC
M6432_1.02 PPARD chr2 - 209771591 209771604 5.75e-05 0.302 TGTCCCCTGTCCTG
M6432_1.02 PPARD chr5 - 141754422 141754435 5.93e-05 0.302 TGACCTTGGCCCAT
M6432_1.02 PPARD chr16 + 23026759 23026772 5.98e-05 0.302 TTTCCTTTCTCCAA
M6432_1.02 PPARD chr3 + 48661950 48661963 6.01e-05 0.302 TGTCCTTTCTGCTC
M6432_1.02 PPARD chr19 - 13441956 13441969 6.04e-05 0.302 TGACCTTGTTCCAT
M6432_1.02 PPARD chr7 + 127107826 127107839 6.26e-05 0.302 AGTCCTGTTCCCTA
M6432_1.02 PPARD chr1 - 202693371 202693384 6.4e-05 0.302 TGAACTGTGCACTG
M6432_1.02 PPARD chr17 - 82415023 82415036 6.6e-05 0.302 CGTCCTGTGCCCCA
M6432_1.02 PPARD chr20 + 38692455 38692468 6.75e-05 0.302 tttccttttgcctc
M6432_1.02 PPARD chr6 + 31542397 31542410 6.78e-05 0.302 TGACCTGAGGACTG
M6432_1.02 PPARD chr4 - 118669536 118669549 6.88e-05 0.302 TAACCTCTGTACTT
M6432_1.02 PPARD chr5 + 140402603 140402616 6.88e-05 0.302 TGCCCTTGGTACTg
M6432_1.02 PPARD chr1 + 110156179 110156192 6.91e-05 0.302 TGACCAGTTCCCCA
M6432_1.02 PPARD chr17 - 34703658 34703671 6.94e-05 0.302 TTCCCTTTGCCCCA
M6432_1.02 PPARD chr22 - 24876081 24876094 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr17 + 36777322 36777335 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr19 + 51422160 51422173 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr19 + 53927902 53927915 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr17 + 58120399 58120412 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr6 - 87436595 87436608 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr6 - 104887539 104887552 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr1 + 110156097 110156110 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chrX + 153875548 153875561 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr6 - 159267361 159267374 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr1 + 209937784 209937797 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr1 + 227273723 227273736 6.98e-05 0.302 TGTCCATGGTCCTG
M6432_1.02 PPARD chr11 + 45899258 45899271 7.01e-05 0.302 TGCCCTCTCCCCCA
M6432_1.02 PPARD chr5 + 6328220 6328233 7.05e-05 0.302 TGCCCTATTACCTG
M6432_1.02 PPARD chr12 - 98897398 98897411 7.28e-05 0.308 TGTCCTTTGCCCGG
M6432_1.02 PPARD chr12 + 2752840 2752853 7.51e-05 0.308 TGTCCCTGGTCCTG
M6432_1.02 PPARD chr1 - 21659313 21659326 7.51e-05 0.308 TGTCCCTGGTCCTG
M6432_1.02 PPARD chr20 - 37573054 37573067 7.51e-05 0.308 TGTCCCTGGTCCTG
M6432_1.02 PPARD chr22 - 50270936 50270949 7.51e-05 0.308 TGTCCCTGGTCCTG
M6432_1.02 PPARD chr20 + 64162173 64162186 7.51e-05 0.308 TGCTCTTTTCCCTG
M6432_1.02 PPARD chr4 + 173252474 173252487 7.61e-05 0.308 TGTTCTCTTCCCTA
M6432_1.02 PPARD chr19 + 51422025 51422038 7.68e-05 0.308 TGTCCTTTGAGCTC
M6432_1.02 PPARD chr16 - 71467891 71467904 7.72e-05 0.308 TGTCCTTTGTACCT
M6432_1.02 PPARD chr8 + 61288145 61288158 7.79e-05 0.308 TTACCTTTTTTCTC
M6432_1.02 PPARD chr11 + 123654221 123654234 7.79e-05 0.308 TCACCTCTCGCCTC
M6432_1.02 PPARD chr19 + 51608000 51608013 8.01e-05 0.315 TGTCCTCTGACCAG
M6432_1.02 PPARD chr19 + 35879775 35879788 8.08e-05 0.315 AGTCCTCTTCCCTA
M6432_1.02 PPARD chr19 - 7509640 7509653 8.23e-05 0.319 TGACCTGGGGACCA
M6432_1.02 PPARD chr12 - 67193811 67193824 8.31e-05 0.32 TGACCTTTAACATT
M6432_1.02 PPARD chr1 + 156652179 156652192 8.48e-05 0.32 TTCCCTTTTTCCTT
M6432_1.02 PPARD chr20 - 63653217 63653230 8.54e-05 0.32 TTTCCCTTCTCCTA
M6432_1.02 PPARD chr19 - 41696556 41696569 8.58e-05 0.32 TATTCTTTGCCCTG
M6432_1.02 PPARD chr19 + 3307676 3307689 8.62e-05 0.32 tgtccttggtcccc
M6432_1.02 PPARD chr7 - 150984160 150984173 8.62e-05 0.32 TGCACTGTGTCCTG
M6432_1.02 PPARD chr6 - 4853533 4853546 8.65e-05 0.32 TATCCTTGGTACTA
M6432_1.02 PPARD chr21 - 33157632 33157645 8.69e-05 0.32 TGATCTTTAAACCA
M6432_1.02 PPARD chr19 + 5404280 5404293 9.03e-05 0.33 TCTCCTGTTCCCTG
M6432_1.02 PPARD chr3 - 24160580 24160593 9.19e-05 0.333 TGTCCTTGGTACTT
M6432_1.02 PPARD chr3 - 9704317 9704330 9.42e-05 0.333 AGAACTTTGTCCTC
M6432_1.02 PPARD chr6 + 34115491 34115504 9.5e-05 0.333 TGCCCCTTCCCCTG
M6432_1.02 PPARD chr13 + 77563559 77563572 9.5e-05 0.333 TATCCTTACCCCTA
M6432_1.02 PPARD chr10 + 101081316 101081329 9.55e-05 0.333 CTACCTTTCCCCAA
M6432_1.02 PPARD chr17 + 29004104 29004117 9.59e-05 0.333 TGACCCCTCACCCA
M6432_1.02 PPARD chr5 - 96434544 96434557 9.64e-05 0.333 TTACTTTTGGCCTG
M6432_1.02 PPARD chr19 - 51608082 51608095 9.76e-05 0.333 AGAACTCTGTCCTG
M6432_1.02 PPARD chr20 - 10219413 10219426 9.8e-05 0.333 TCTCCTTTCGCCTC
M6432_1.02 PPARD chr19 - 55217053 55217066 9.8e-05 0.333 TGCCCTGGAGCCTG
M6432_1.02 PPARD chr1 - 153422811 153422824 9.8e-05 0.333 TTCCCTTTGCCCTC
M6432_1.02 PPARD chr1 + 153452437 153452450 9.8e-05 0.333 TTCCCTTTGCCCTC
M6432_1.02 PPARD chr7 + 96322188 96322201 9.89e-05 0.334 CGGCCTCTGCCCTG

DEBUGGING INFORMATION

Command line:

/software/meme/4.12.0/bin/fimo --parse-genomic-coord --verbosity 1 --oc /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_3 --bgfile /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background --motif M6432_1.02 /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa

Settings:

output_directory = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/fimo_out_3 MEME file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/MotifData/motif_databases/CIS-BP/Homo_sapiens.meme sequence file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.fa
background file name = /srv/scratch/shared/surya/imk1/TFBindingPredictionProject/EncodeOtherZnfData/Encode3Datahg38/REST.IDR0.05.filt.narrowPeak.top600.summitPlusMinus250bp.MemeChipResultsDefaultMax/background alphabet = DNA max stored scores = 100000
allow clobber = true compute q-values = true parse genomic coord. = true
text only = false scan both strands = true max strand = false
threshold type = p-value output theshold = 0.0001 pseudocount = 0.1
alpha = 1 verbosity = 1

This information can be useful in the event you wish to report a problem with the FIMO software.


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